ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463533.1| Oryza sativa (japonica cultivar-group), predic... 178 1e-41
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
3dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
4gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
5gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7ref|NM_202151.1| Arabidopsis thaliana unknown protein AT1G21610 ... 80 9e-12
8ref|NM_102010.3| Arabidopsis thaliana unknown protein AT1G21610 ... 80 9e-12
9ref|NM_106380.1| Arabidopsis thaliana unknown protein AT1G77310 ... 80 9e-12
10gb|AY125533.1| Arabidopsis thaliana At1g21610/F24J8_11 mRNA, com... 80 9e-12
11gb|AY090255.1| Arabidopsis thaliana At1g21610/F24J8_11 mRNA, com... 80 9e-12
12emb|BX814893.1|CNS0ADY3 Arabidopsis thaliana Full-length cDNA Co... 80 9e-12
13gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BAC F24... 56 1e-04
14gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 se... 56 1e-04
15gb|AC078898.5|AC078898 Arabidopsis thaliana chromosome 1 BAC F2P... 48 0.033
16gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genom... 48 0.033
17gb|AY278553.1| Human poliovirus 1 isolate P1W/Bar65 (19276), com... 44 0.52
18gb|AY278551.1| Human poliovirus 2 isolate P2S/Mog66-4 (21043), c... 44 0.52
19ref|NM_128069.1| Arabidopsis thaliana DNA binding AT2G25120 mRNA... 42 2.0
20gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 42 2.0
21gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosom... 42 2.0
22gb|AY017250.1| Human poliovirus 1 isolate CHN-Hainan/92-1 RNA-de... 42 2.0
23emb|AJ719476.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.0
24gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, comple... 42 2.0
25gb|AY520538.1| Homo sapiens DMC1 dosage suppressor of mck1 homol... 40 8.1
26emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 8.1
27ref|XM_445178.1| Candida glabrata CBS138, CAGL0B04785g partial mRNA 40 8.1
28emb|AL162431.17| Human DNA sequence from clone RP11-46A10 on chr... 40 8.1
29emb|AL022320.23|HS199H16 Human DNA sequence from clone RP1-199H1... 40 8.1
30emb|CR380948.1| Candida glabrata strain CBS138 chromosome B comp... 40 8.1
31gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, com... 40 8.1
32gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence 40 8.1
33gb|AC021539.10| Homo sapiens chromosome 4, clone RP11-460H9, com... 40 8.1
34gb|AC096590.4| Homo sapiens BAC clone RP11-751A18 from 4, comple... 40 8.1
35gb|AC008600.7| Homo sapiens chromosome 5 clone CTB-105J5, comple... 40 8.1
36gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, com... 40 8.1
37emb|CR352739.1| Gallus gallus finished cDNA, clone ChEST109g13 40 8.1
38dbj|AB210645.1| Ciona intestinalis mRNA for transcription factor... 40 8.1
39gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete... 40 8.1
40gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.41... 40 8.1
41gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome... 40 8.1
42dbj|AK112159.1| Ciona intestinalis cDNA, clone:cieg024l04, full ... 40 8.1 
>ref|XM_463533.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2250

 Score =  178 bits (90), Expect = 1e-41
 Identities = 167/193 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgagaaaattgagcgcctttacatgggaaaacatagtagtgacgaagaagatctggatg 60
           |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 368 ttgagaaaattgagcgcctttacatgggcaaacatagtagtgatgaagaagatcttgatg 427

                                                                       
Query: 61  atgtgcctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattgg 120
           |||| || |||||||||   |||||||||||||||||||| ||||| || ||||||||||
Sbjct: 428 atgtaccggatgatgatcaatatgacactgaagattcttttattgacgatgctgaattgg 487

                                                                       
Query: 121 atgagtactttgaagttgacaatttggaaaccaagcacactggattttttgtgaacaaag 180
           ||||||| ||||||||  | ||||||   || |||||   ||| | |||||| |||||||
Sbjct: 488 atgagtattttgaagtcaataatttgaggactaagcatgatgggtattttgttaacaaag 547

                        
Query: 181 ggaaactggaaca 193
           |||| ||||||||
Sbjct: 548 ggaagctggaaca 560
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 6e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                            
Query: 30       aaacatagtagtgacgaagaagatctggatgatgtgcctgatgatgatangtatgacact 89
                |||||||||||||| ||||||||||| |||||||| || |||||||||   |||||||||
Sbjct: 38320587 aaacatagtagtgatgaagaagatcttgatgatgtaccggatgatgatcaatatgacact 38320646

                                               
Query: 90       gaagattctttcattgatgacgctgaattgg 120
                ||||||||||| ||||| || ||||||||||
Sbjct: 38320647 gaagattcttttattgacgatgctgaattgg 38320677



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 1        ttgagaaaattgagcgcctttacatgg 27
                |||||||||||||||||||||||||||
Sbjct: 38320488 ttgagaaaattgagcgcctttacatgg 38320514
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>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1065E10
          Length = 183580

 Score =  103 bits (52), Expect = 6e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                         
Query: 30    aaacatagtagtgacgaagaagatctggatgatgtgcctgatgatgatangtatgacact 89
             |||||||||||||| ||||||||||| |||||||| || |||||||||   |||||||||
Sbjct: 81412 aaacatagtagtgatgaagaagatcttgatgatgtaccggatgatgatcaatatgacact 81471

                                            
Query: 90    gaagattctttcattgatgacgctgaattgg 120
             ||||||||||| ||||| || ||||||||||
Sbjct: 81472 gaagattcttttattgacgatgctgaattgg 81502



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 1     ttgagaaaattgagcgcctttacatgg 27
             |||||||||||||||||||||||||||
Sbjct: 81313 ttgagaaaattgagcgcctttacatgg 81339
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>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                         
Query: 119   ggatgagtactttgaagttgacaatttggaaaccaagcacactggattttttgtgaacaa 178
             |||||| || ||||||||||||||||| | ||||||||||| ||| | ||||||||||||
Sbjct: 10958 ggatgaatattttgaagttgacaattttgcaaccaagcacaatggttattttgtgaacaa 10899

                              
Query: 179   agggaaactggaacaaa 195
             ||| ||| |||||||||
Sbjct: 10898 aggaaaattggaacaaa 10882



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 34    atagtagtgacgaagaagatctggatgatgtgcctgatgatgatangtatgacactgaag 93
             |||||||||| || |||||  ||||||||| |||||||||||||  ||||||||| ||||
Sbjct: 11626 atagtagtgatgaggaagacttggatgatgcgcctgatgatgatcagtatgacacagaag 11567

                                        
Query: 94    attctttcattgatgacgctgaattgg 120
             |||| || |||||||| | ||||||||
Sbjct: 11566 attcgtttattgatgatgatgaattgg 11540



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 1     ttgagaaaattgagcgcctttacatgg 27
             |||||||||||||||||||||||||||
Sbjct: 11762 ttgagaaaattgagcgcctttacatgg 11736



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 235   cagtacaaaatgttggaccaaagaaacggagaagaagagactcttcaaattctta 289
             ||||||| | ||||| |||||||||||| ||| ||| |||||| |||| ||||||
Sbjct: 10630 cagtacagactgttgaaccaaagaaacgaagacgaaaagactcatcaagttctta 10576
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21,
              complete sequence
          Length = 132649

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                          
Query: 119    ggatgagtactttgaagttgacaatttggaaaccaagcacactggattttttgtgaacaa 178
              |||||| || ||||||||||||||||| | ||||||||||| ||| | ||||||||||||
Sbjct: 132397 ggatgaatattttgaagttgacaattttgcaaccaagcacaatggttattttgtgaacaa 132338

                               
Query: 179    agggaaactggaacaaa 195
              ||| ||| |||||||||
Sbjct: 132337 aggaaaattggaacaaa 132321



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                     
Query: 235    cagtacaaaatgttggaccaaagaaacggagaagaagagactcttcaaattctta 289
              ||||||| | ||||| |||||||||||| ||| ||| |||||| |||| ||||||
Sbjct: 132069 cagtacagactgttgaaccaaagaaacgaagacgaaaagactcatcaagttctta 132015
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 119      ggatgagtactttgaagttgacaatttggaaaccaagcacactggattttttgtgaacaa 178
                |||||| || ||||||||||||||||| | ||||||||||| ||| | ||||||||||||
Sbjct: 20588918 ggatgaatattttgaagttgacaattttgcaaccaagcacaatggttattttgtgaacaa 20588859

                                 
Query: 179      agggaaactggaacaaa 195
                ||| ||| |||||||||
Sbjct: 20588858 aggaaaattggaacaaa 20588842



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                            
Query: 34       atagtagtgacgaagaagatctggatgatgtgcctgatgatgatangtatgacactgaag 93
                |||||||||| || |||||  ||||||||| |||||||||||||  ||||||||| ||||
Sbjct: 20589586 atagtagtgatgaggaagacttggatgatgcgcctgatgatgatcagtatgacacagaag 20589527

                                           
Query: 94       attctttcattgatgacgctgaattgg 120
                |||| || |||||||| | ||||||||
Sbjct: 20589526 attcgtttattgatgatgatgaattgg 20589500



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 1        ttgagaaaattgagcgcctttacatgg 27
                |||||||||||||||||||||||||||
Sbjct: 20589722 ttgagaaaattgagcgcctttacatgg 20589696



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 235      cagtacaaaatgttggaccaaagaaacggagaagaagagactcttcaaattctta 289
                ||||||| | ||||| |||||||||||| ||| ||| |||||| |||| ||||||
Sbjct: 20588590 cagtacagactgttgaaccaaagaaacgaagacgaaaagactcatcaagttctta 20588536
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>ref|NM_202151.1| Arabidopsis thaliana unknown protein AT1G21610 transcript variant
           AT1G21610.2 mRNA, complete cds
          Length = 2518

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattggatgag 125
           ||||||||||||  |||||||||||||||||| || || ||||| |||||| ||||||||
Sbjct: 520 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaactggatgag 579

                              
Query: 126 tactttgaagttgacaatt 144
           || || |||||||| ||||
Sbjct: 580 tatttcgaagttgataatt 598
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>ref|NM_102010.3| Arabidopsis thaliana unknown protein AT1G21610 transcript variant
           AT1G21610.1 mRNA, complete cds
          Length = 2521

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattggatgag 125
           ||||||||||||  |||||||||||||||||| || || ||||| |||||| ||||||||
Sbjct: 520 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaactggatgag 579

                              
Query: 126 tactttgaagttgacaatt 144
           || || |||||||| ||||
Sbjct: 580 tatttcgaagttgataatt 598
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>ref|NM_106380.1| Arabidopsis thaliana unknown protein AT1G77310 mRNA, complete cds
          Length = 2409

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 81  tatgacactgaagattctttcattgatgacgctgaattggatgagtactttgaagttgac 140
           ||||||||||||||||| || || ||||| ||||||||||||||||| ||||||||||| 
Sbjct: 540 tatgacactgaagattcatttatcgatgatgctgaattggatgagtattttgaagttgat 599

               
Query: 141 aatt 144
           ||||
Sbjct: 600 aatt 603
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>gb|AY125533.1| Arabidopsis thaliana At1g21610/F24J8_11 mRNA, complete cds
          Length = 2055

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattggatgag 125
           ||||||||||||  |||||||||||||||||| || || ||||| |||||| ||||||||
Sbjct: 367 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaactggatgag 426

                              
Query: 126 tactttgaagttgacaatt 144
           || || |||||||| ||||
Sbjct: 427 tatttcgaagttgataatt 445
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>gb|AY090255.1| Arabidopsis thaliana At1g21610/F24J8_11 mRNA, complete cds
          Length = 2449

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattggatgag 125
           ||||||||||||  |||||||||||||||||| || || ||||| |||||| ||||||||
Sbjct: 522 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaactggatgag 581

                              
Query: 126 tactttgaagttgacaatt 144
           || || |||||||| ||||
Sbjct: 582 tatttcgaagttgataatt 600
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>emb|BX814893.1|CNS0ADY3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS16ZH08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2375

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaattggatgag 125
           ||||||||||||  |||||||||||||||||| || || ||||| |||||| ||||||||
Sbjct: 459 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaactggatgag 518

                              
Query: 126 tactttgaagttgacaatt 144
           || || |||||||| ||||
Sbjct: 519 tatttcgaagttgataatt 537
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>gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BAC F24J8 genomic sequence, complete
              sequence
          Length = 108365

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 66     cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaa 116
              ||||||||||||  |||||||||||||||||| || || ||||| ||||||
Sbjct: 103268 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaa 103318
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>gb|AC007727.2|F8K7 Arabidopsis thaliana chromosome 1 BAC F8K7 sequence, complete
            sequence
          Length = 98581

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 66   cctgatgatgatangtatgacactgaagattctttcattgatgacgctgaa 116
            ||||||||||||  |||||||||||||||||| || || ||||| ||||||
Sbjct: 4474 cctgatgatgatgagtatgacactgaagattcatttatagatgatgctgaa 4524
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>gb|AC078898.5|AC078898 Arabidopsis thaliana chromosome 1 BAC F2P24 genomic sequence,
            complete sequence
          Length = 46855

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 81   tatgacactgaagattctttcattgatgacgctgaattgg 120
            ||||||||||||||||| || || ||||| ||||||||||
Sbjct: 2866 tatgacactgaagattcatttatcgatgatgctgaattgg 2905
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>gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete
             sequence
          Length = 83822

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 81    tatgacactgaagattctttcattgatgacgctgaattgg 120
             ||||||||||||||||| || || ||||| ||||||||||
Sbjct: 80972 tatgacactgaagattcatttatcgatgatgctgaattgg 81011
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>gb|AY278553.1| Human poliovirus 1 isolate P1W/Bar65 (19276), complete genome
          Length = 7436

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 518  gttaccaacatacttggagaag 539
            ||||||||||||||||||||||
Sbjct: 6177 gttaccaacatacttggagaag 6156
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>gb|AY278551.1| Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome
          Length = 7439

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 518  gttaccaacatacttggagaag 539
            ||||||||||||||||||||||
Sbjct: 6180 gttaccaacatacttggagaag 6159
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>ref|NM_128069.1| Arabidopsis thaliana DNA binding AT2G25120 mRNA, complete cds
          Length = 1143

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 251 accaaagaaacggagaagaag 271
           |||||||||||||||||||||
Sbjct: 61  accaaagaaacggagaagaag 81
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>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   gagaagaagagactcttcaaa 283
             |||||||||||||||||||||
Sbjct: 55853 gagaagaagagactcttcaaa 55833
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>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence
          Length = 163348

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 263   gagaagaagagactcttcaaa 283
             |||||||||||||||||||||
Sbjct: 12994 gagaagaagagactcttcaaa 13014
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>gb|AY017250.1| Human poliovirus 1 isolate CHN-Hainan/92-1 RNA-dependent RNA
           polymerase 3Dpol gene, partial cds
          Length = 534

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 519 ttaccaacatacttggagaag 539
           |||||||||||||||||||||
Sbjct: 170 ttaccaacatacttggagaag 150
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>emb|AJ719476.1| Gallus gallus mRNA for hypothetical protein, clone 2k22
          Length = 2541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 552  caacttgatctccaattgaaaaaat 576
            |||| ||||||||||||||||||||
Sbjct: 2531 caacatgatctccaattgaaaaaat 2507
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>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence
          Length = 216451

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 453   gcaagaatgcagaaagtgaat 473
             |||||||||||||||||||||
Sbjct: 68154 gcaagaatgcagaaagtgaat 68134
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>gb|AY520538.1| Homo sapiens DMC1 dosage suppressor of mck1 homolog, meiosis-specific
            homologous recombination (yeast) (DMC1) gene, complete
            cds
          Length = 54397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  gctcttgaaataggaaagca 370
            ||||||||||||||||||||
Sbjct: 7009 gctcttgaaataggaaagca 7028
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    gccagtgacaatgcaactgg 493
              ||||||||||||||||||||
Sbjct: 623557 gccagtgacaatgcaactgg 623538
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>ref|XM_445178.1| Candida glabrata CBS138, CAGL0B04785g partial mRNA
          Length = 801

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 110 cgctgaattggatgagtactttga 133
           |||| |||||||||||||||||||
Sbjct: 120 cgctcaattggatgagtactttga 143
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>emb|AL162431.17| Human DNA sequence from clone RP11-46A10 on chromosome 1q25.2-31.1
              Contains the 3' end of the XPR1 gene for xenotropic and
              polytropic retrovirus receptor, three novel genes
              (FLJ32095), gene KIAA1614, a pseudogene similar to part of
              major histocompatibility complex class I-related MR1, the
              3' end of the STX6 gene for syntaxin 6 and a CpG island,
              complete sequence
          Length = 139006

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ggatgatgtgcctgatgatg 75
              ||||||||||||||||||||
Sbjct: 128256 ggatgatgtgcctgatgatg 128237
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>emb|AL022320.23|HS199H16 Human DNA sequence from clone RP1-199H16 on chromosome 22q12-13,
             complete sequence
          Length = 85500

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   gctcttgaaataggaaagca 370
             ||||||||||||||||||||
Sbjct: 51424 gctcttgaaataggaaagca 51405
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>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence
          Length = 502101

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    cgctgaattggatgagtactttga 133
              |||| |||||||||||||||||||
Sbjct: 459513 cgctcaattggatgagtactttga 459536
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>gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, complete sequence
          Length = 209123

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gcctttacatgggaaaacat 35
              ||||||||||||||||||||
Sbjct: 103401 gcctttacatgggaaaacat 103420
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>gb|DQ103594.1| Capsella rubella clone BAC 8F1, complete sequence
          Length = 83679

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    gaagattctttcattgatga 109
             ||||||||||||||||||||
Sbjct: 20945 gaagattctttcattgatga 20926
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>gb|AC021539.10| Homo sapiens chromosome 4, clone RP11-460H9, complete sequence
          Length = 191158

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tgacactgaagattctttca 102
             ||||||||||||||||||||
Sbjct: 26263 tgacactgaagattctttca 26282
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>gb|AC096590.4| Homo sapiens BAC clone RP11-751A18 from 4, complete sequence
          Length = 182559

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tgacactgaagattctttca 102
              ||||||||||||||||||||
Sbjct: 118588 tgacactgaagattctttca 118607
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>gb|AC008600.7| Homo sapiens chromosome 5 clone CTB-105J5, complete sequence
          Length = 147114

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tgacactgaagattctttca 102
             ||||||||||||||||||||
Sbjct: 93843 tgacactgaagattctttca 93862
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>gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, complete sequence
          Length = 195156

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 402    gaatatcactctgaaggcaacaaa 425
              |||||||| |||||||||||||||
Sbjct: 137803 gaatatcattctgaaggcaacaaa 137780
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>emb|CR352739.1| Gallus gallus finished cDNA, clone ChEST109g13
          Length = 1006

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 552 caacttgatctccaattgaaaaaa 575
           |||| |||||||||||||||||||
Sbjct: 733 caacatgatctccaattgaaaaaa 710
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>dbj|AB210645.1| Ciona intestinalis mRNA for transcription factor protein, complete
           cds, clone: cieg024l04
          Length = 2230

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 accaaagaaacggagaagaa 270
           ||||||||||||||||||||
Sbjct: 944 accaaagaaacggagaagaa 963
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>gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   agtacaaaatgttggaccag 228
             ||||||||||||||||||||
Sbjct: 57969 agtacaaaatgttggaccag 57950
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>gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.411_H_24, complete sequence
          Length = 179726

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   caaagaaacggagaagaaga 272
             ||||||||||||||||||||
Sbjct: 41138 caaagaaacggagaagaaga 41157
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>gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome 3, complete sequence
          Length = 230573

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    tggaaaccaagcacactgga 164
              ||||||||||||||||||||
Sbjct: 114283 tggaaaccaagcacactgga 114302
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>dbj|AK112159.1| Ciona intestinalis cDNA, clone:cieg024l04, full insert sequence
          Length = 2231

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 accaaagaaacggagaagaa 270
           ||||||||||||||||||||
Sbjct: 945 accaaagaaacggagaagaa 964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,344,307
Number of Sequences: 3902068
Number of extensions: 6344307
Number of successful extensions: 101582
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101422
Number of HSP's gapped (non-prelim): 160
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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