ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20c17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188639.1| Oryza sativa (japonica cultivar-group), Ozsa824... 125 3e-26
2dbj|AK065256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 3e-26
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 3e-11
4dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic D... 76 3e-11
5ref|XM_512578.1| PREDICTED: Pan troglodytes similar to chromosom... 44 0.10
6gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chrom... 44 0.10
7ref|NM_015578.1| Homo sapiens LSM14 homolog A (SCD6, S. cerevisi... 44 0.10
8gb|BC016842.1| Homo sapiens LSM14 homolog A (SCD6, S. cerevisiae... 44 0.10
9emb|CR861180.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1116 (from cl... 44 0.10
10emb|AL834398.1|HSM805482 Homo sapiens mRNA; cDNA DKFZp547L1110 (... 44 0.10
11dbj|AK127401.1| Homo sapiens cDNA FLJ45492 fis, clone BRTHA2008502 44 0.10
12dbj|AK027643.1| Homo sapiens cDNA FLJ14737 fis, clone NT2RP30022... 44 0.10
13dbj|AK027369.1| Homo sapiens cDNA FLJ14463 fis, clone MAMMA10002... 44 0.10
14gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 44 0.10
15gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, com... 44 0.10
16dbj|AB069975.1| Homo sapiens mRNA for alphaSNBP(B), complete cds 44 0.10
17dbj|AB069974.1| Homo sapiens mRNA for alphaSNBP(A), complete cds 44 0.10
18emb|AL833221.1|HSM804532 Homo sapiens mRNA; cDNA DKFZp667H157 (f... 44 0.10
19gb|AY577000.1| Danio rerio clone RZ150A1H09 C19orf13-like protei... 42 0.40
20emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on ch... 42 0.40
21gb|BC065685.1| Danio rerio zgc:77202, mRNA (cDNA clone MGC:77202... 42 0.40
22gb|BC047185.1| Danio rerio zgc:77202, mRNA (cDNA clone MGC:55754... 42 0.40
23ref|NM_214745.1| Danio rerio zgc:77202 (zgc:77202), mRNA 42 0.40
24ref|NM_214772.1| Danio rerio zgc:77202 (zgc:77202), mRNA 42 0.40
25gb|AF003389.2| Caenorhabditis elegans cosmid F23H11, complete se... 40 1.6
26emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 i... 40 1.6
27ref|NM_064887.2| Caenorhabditis elegans F23H11.3 (F23H11.3) mRNA... 40 1.6
28gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cance... 40 1.6
29gb|AC006336.4|AC006336 Homo sapiens BAC clone RP11-508K5 from Y,... 40 1.6
30emb|AM114764.1| Platynereis dumerilii partial mRNA for axonemal ... 40 1.6
31ref|NM_214192.1| Sus scrofa gelatinase A (MMP-2), mRNA 38 6.3
32ref|XM_954892.1| Neurospora crassa OR74A hypothetical protein (N... 38 6.3
33ref|XM_325977.1| Neurospora crassa OR74A hypothetical protein (N... 38 6.3
34gb|AC148206.3| Callicebus moloch clone LB5-384O14, complete sequ... 38 6.3
35ref|XM_860423.1| PREDICTED: Canis familiaris similar to calmodul... 38 6.3
36ref|XM_860405.1| PREDICTED: Canis familiaris similar to calmodul... 38 6.3
37ref|XM_533635.2| PREDICTED: Canis familiaris similar to calmodul... 38 6.3
38emb|AL512422.19| Human DNA sequence from clone RP11-472M19 on ch... 38 6.3
39gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8... 38 6.3
40ref|XM_785693.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 6.3
41ref|XM_786725.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 6.3
42emb|AL050331.11|HSDJ486I3 Human DNA sequence from clone RP3-486I... 38 6.3
43ref|XM_792059.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 6.3
44emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone ... 38 6.3
45gb|AF232939.1| Bordetella bronchiseptica strain SB22 flagellin g... 38 6.3
46gb|AC012472.7| Homo sapiens chromosome 10 clone RP11-71O9, compl... 38 6.3
47gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, com... 38 6.3
48gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 38 6.3
49gb|AC159293.2| Mus musculus BAC clone RP23-282K7 from chromosome... 38 6.3
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.3
51gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, comp... 38 6.3
52gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15,... 38 6.3
53dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 38 6.3
54gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7... 38 6.3
55emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in ... 38 6.3
56gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 6.3
57emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of Encepha... 38 6.3
58emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 38 6.3
59emb|AL807770.17| Mouse DNA sequence from clone RP23-206L14 on ch... 38 6.3
60gb|AC004800.1|AC004800 Homo sapiens chromosome 7 clone UWGC:g358... 38 6.3
61gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 38 6.3 
>ref|NM_188639.1| Oryza sativa (japonica cultivar-group), Ozsa8242 predicted mRNA
          Length = 615

 Score =  125 bits (63), Expect = 3e-26
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  ctcagcaagttcttcgacaaggatggcaagaangccgncgccgccgagttcttgaaatcc 69
           |||| |||| |||| ||||||||||| ||||| || |  || || |||||||||||||| 
Sbjct: 37  ctcaacaagctctttgacaaggatggaaagaaggctgctgctgctgagttcttgaaatca 96

                                                                       
Query: 70  ttcaacaaggaagagattgacaaggagattgaggacaagaagacagaattagagcccaag 129
           ||||||||||| ||||||| |||||||||||| ||||||||||||||  |||||||||||
Sbjct: 97  ttcaacaaggaggagattggcaaggagattgatgacaagaagacagagctagagcccaag 156

                
Query: 130 gttgt 134
           |||||
Sbjct: 157 gttgt 161
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>dbj|AK065256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J14, full
           insert sequence
          Length = 1243

 Score =  125 bits (63), Expect = 3e-26
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  ctcagcaagttcttcgacaaggatggcaagaangccgncgccgccgagttcttgaaatcc 69
           |||| |||| |||| ||||||||||| ||||| || |  || || |||||||||||||| 
Sbjct: 180 ctcaacaagctctttgacaaggatggaaagaaggctgctgctgctgagttcttgaaatca 239

                                                                       
Query: 70  ttcaacaaggaagagattgacaaggagattgaggacaagaagacagaattagagcccaag 129
           ||||||||||| ||||||| |||||||||||| ||||||||||||||  |||||||||||
Sbjct: 240 ttcaacaaggaggagattggcaaggagattgatgacaagaagacagagctagagcccaag 299

                
Query: 130 gttgt 134
           |||||
Sbjct: 300 gttgt 304
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 3e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                         
Query: 77      aggaagagattgacaaggagattgaggacaagaagacagaattagagcccaaggttgt 134
               |||| ||||||| |||||||||||| ||||||||||||||  ||||||||||||||||
Sbjct: 7364606 aggaggagattggcaaggagattgatgacaagaagacagagctagagcccaaggttgt 7364549



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 10      ctcagcaagttcttcgacaaggatggcaagaangccgncgccgccgagttcttgaaatcc 69
               |||| |||| |||| ||||||||||| ||||| || |  || || |||||||||||||| 
Sbjct: 7364777 ctcaacaagctctttgacaaggatggaaagaaggctgctgctgctgagttcttgaaatca 7364718

                         
Query: 70      ttcaacaagg 79
               ||||||||||
Sbjct: 7364717 ttcaacaagg 7364708
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>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0702F03
          Length = 141111

 Score = 75.8 bits (38), Expect = 3e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 77    aggaagagattgacaaggagattgaggacaagaagacagaattagagcccaaggttgt 134
             |||| ||||||| |||||||||||| ||||||||||||||  ||||||||||||||||
Sbjct: 25634 aggaggagattggcaaggagattgatgacaagaagacagagctagagcccaaggttgt 25577



 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 10    ctcagcaagttcttcgacaaggatggcaagaangccgncgccgccgagttcttgaaatcc 69
             |||| |||| |||| ||||||||||| ||||| || |  || || |||||||||||||| 
Sbjct: 25805 ctcaacaagctctttgacaaggatggaaagaaggctgctgctgctgagttcttgaaatca 25746

                       
Query: 70    ttcaacaagg 79
             ||||||||||
Sbjct: 25745 ttcaacaagg 25736
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>ref|XM_512578.1| PREDICTED: Pan troglodytes similar to chromosome 19 open reading
           frame 13 (LOC455937), mRNA
          Length = 1330

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 70  ttcaacaaggaagagattgaca 91
           ||||||||||||||||||||||
Sbjct: 736 ttcaacaaggaagagattgaca 757
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>gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 170
            of 256 of the complete sequence
          Length = 10570

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 18   gttcttcgacaaggatggcaag 39
            ||||||||||||||||||||||
Sbjct: 6692 gttcttcgacaaggatggcaag 6713
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>ref|NM_015578.1| Homo sapiens LSM14 homolog A (SCD6, S. cerevisiae) (LSM14A), mRNA
          Length = 3389

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 990  ttcaacaaggaagagattgaca 1011
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>gb|BC016842.1| Homo sapiens LSM14 homolog A (SCD6, S. cerevisiae), mRNA (cDNA clone
            MGC:10135 IMAGE:3902704), complete cds
          Length = 2300

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 1109 ttcaacaaggaagagattgaca 1130
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>emb|CR861180.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1116 (from clone DKFZp459H1116)
          Length = 2117

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 70  ttcaacaaggaagagattgaca 91
           ||||||||||||||||||||||
Sbjct: 931 ttcaacaaggaagagattgaca 952
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>emb|AL834398.1|HSM805482 Homo sapiens mRNA; cDNA DKFZp547L1110 (from clone DKFZp547L1110)
          Length = 2306

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 1018 ttcaacaaggaagagattgaca 1039
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>dbj|AK127401.1| Homo sapiens cDNA FLJ45492 fis, clone BRTHA2008502
          Length = 3625

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 1232 ttcaacaaggaagagattgaca 1253
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>dbj|AK027643.1| Homo sapiens cDNA FLJ14737 fis, clone NT2RP3002273, weakly similar to
            SCD6 PROTEIN
          Length = 3389

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 990  ttcaacaaggaagagattgaca 1011
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>dbj|AK027369.1| Homo sapiens cDNA FLJ14463 fis, clone MAMMA1000284, moderately
           similar to P.walti mRNA for rnp associated protein 55
          Length = 1900

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 70  ttcaacaaggaagagattgaca 91
           ||||||||||||||||||||||
Sbjct: 719 ttcaacaaggaagagattgaca 740
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 18      gttcttcgacaaggatggcaag 39
               ||||||||||||||||||||||
Sbjct: 1882222 gttcttcgacaaggatggcaag 1882243
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>gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, complete sequence
          Length = 158595

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    ttcaacaaggaagagattgaca 91
             ||||||||||||||||||||||
Sbjct: 77167 ttcaacaaggaagagattgaca 77188
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>dbj|AB069975.1| Homo sapiens mRNA for alphaSNBP(B), complete cds
          Length = 1839

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 988  ttcaacaaggaagagattgaca 1009
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>dbj|AB069974.1| Homo sapiens mRNA for alphaSNBP(A), complete cds
          Length = 1896

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 70   ttcaacaaggaagagattgaca 91
            ||||||||||||||||||||||
Sbjct: 988  ttcaacaaggaagagattgaca 1009
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>emb|AL833221.1|HSM804532 Homo sapiens mRNA; cDNA DKFZp667H157 (from clone DKFZp667H157)
          Length = 3054

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 70  ttcaacaaggaagagattgaca 91
           ||||||||||||||||||||||
Sbjct: 582 ttcaacaaggaagagattgaca 603
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>gb|AY577000.1| Danio rerio clone RZ150A1H09 C19orf13-like protein mRNA, complete
           cds
          Length = 1701

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  ttcaacaaggaagagattgac 90
           |||||||||||||||||||||
Sbjct: 972 ttcaacaaggaagagattgac 992
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>emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on chromosome 10 Contains part
              of the gene for VPS10 domain receptor protein SORCS 3
              (SORCS3), complete sequence
          Length = 149248

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 70     ttcaacaaggaagagattgacaagg 94
              ||||| |||||||||||||||||||
Sbjct: 139184 ttcaaaaaggaagagattgacaagg 139160
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>gb|BC065685.1| Danio rerio zgc:77202, mRNA (cDNA clone MGC:77202 IMAGE:6962125),
           complete cds
          Length = 3397

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  ttcaacaaggaagagattgac 90
           |||||||||||||||||||||
Sbjct: 960 ttcaacaaggaagagattgac 980
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>gb|BC047185.1| Danio rerio zgc:77202, mRNA (cDNA clone MGC:55754 IMAGE:3816509),
            complete cds
          Length = 3435

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   ttcaacaaggaagagattgac 90
            |||||||||||||||||||||
Sbjct: 992  ttcaacaaggaagagattgac 1012
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>ref|NM_214745.1| Danio rerio zgc:77202 (zgc:77202), mRNA
          Length = 3397

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  ttcaacaaggaagagattgac 90
           |||||||||||||||||||||
Sbjct: 960 ttcaacaaggaagagattgac 980
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>ref|NM_214772.1| Danio rerio zgc:77202 (zgc:77202), mRNA
          Length = 3435

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   ttcaacaaggaagagattgac 90
            |||||||||||||||||||||
Sbjct: 992  ttcaacaaggaagagattgac 1012
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>gb|AF003389.2| Caenorhabditis elegans cosmid F23H11, complete sequence
          Length = 30610

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   gccgccgagttcttgaaatc 68
            ||||||||||||||||||||
Sbjct: 4758 gccgccgagttcttgaaatc 4739
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>emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 in linkage group 13,
             complete sequence
          Length = 210138

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    aacaaggaagagattgacaa 92
             ||||||||||||||||||||
Sbjct: 76539 aacaaggaagagattgacaa 76558
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>ref|NM_064887.2| Caenorhabditis elegans F23H11.3 (F23H11.3) mRNA, complete cds
          Length = 1118

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  gccgccgagttcttgaaatc 68
           ||||||||||||||||||||
Sbjct: 748 gccgccgagttcttgaaatc 767
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>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202028

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 93     ggagattgaggacaagaagacaga 116
              ||||||||||| ||||||||||||
Sbjct: 180716 ggagattgaggccaagaagacaga 180739
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>gb|AC006336.4|AC006336 Homo sapiens BAC clone RP11-508K5 from Y, complete sequence
          Length = 95956

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    ttgaggacaagaagacagaa 117
             ||||||||||||||||||||
Sbjct: 75357 ttgaggacaagaagacagaa 75376
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>emb|AM114764.1| Platynereis dumerilii partial mRNA for axonemal dynein heavy chain
            protein (adhc gene)
          Length = 5268

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   caaggagattgaggacaaga 109
            ||||||||||||||||||||
Sbjct: 2619 caaggagattgaggacaaga 2638
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>ref|NM_214192.1| Sus scrofa gelatinase A (MMP-2), mRNA
          Length = 2857

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cttcgacaaggatggcaag 39
           |||||||||||||||||||
Sbjct: 843 cttcgacaaggatggcaag 861
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>ref|XM_954892.1| Neurospora crassa OR74A hypothetical protein (NCU06123.1) partial
           mRNA
          Length = 2484

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caaggaagagattgacaag 93
           |||||||||||||||||||
Sbjct: 84  caaggaagagattgacaag 102
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>ref|XM_325977.1| Neurospora crassa OR74A hypothetical protein (NCU06123.1) partial
           mRNA
          Length = 2484

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caaggaagagattgacaag 93
           |||||||||||||||||||
Sbjct: 84  caaggaagagattgacaag 102
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>gb|AC148206.3| Callicebus moloch clone LB5-384O14, complete sequence
          Length = 160507

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     agttcttgaaatccttcaa 74
              |||||||||||||||||||
Sbjct: 140343 agttcttgaaatccttcaa 140325
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>ref|XM_860423.1| PREDICTED: Canis familiaris similar to calmodulin 1, transcript
           variant 3 (LOC476428), mRNA
          Length = 2328

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  tcttcgacaaggatggcaa 38
           |||||||||||||||||||
Sbjct: 487 tcttcgacaaggatggcaa 505
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>ref|XM_860405.1| PREDICTED: Canis familiaris similar to calmodulin 1, transcript
           variant 2 (LOC476428), mRNA
          Length = 2274

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  tcttcgacaaggatggcaa 38
           |||||||||||||||||||
Sbjct: 433 tcttcgacaaggatggcaa 451
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>ref|XM_533635.2| PREDICTED: Canis familiaris similar to calmodulin 1, transcript
           variant 1 (LOC476428), mRNA
          Length = 2332

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  tcttcgacaaggatggcaa 38
           |||||||||||||||||||
Sbjct: 491 tcttcgacaaggatggcaa 509
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>emb|AL512422.19| Human DNA sequence from clone RP11-472M19 on chromosome 6 Contains part
              of the BPAG1 gene for bullous pemphigoid antigen 1
              (230/240kD), a novel gene, a ribosomal protein L17 (RPL17)
              pseudogene and three CpG islands, complete sequence
          Length = 157918

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    gaggacaagaagacagaat 118
              |||||||||||||||||||
Sbjct: 141148 gaggacaagaagacagaat 141166
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>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete
             sequence
          Length = 249943

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    acaaggaagagattgacaa 92
             |||||||||||||||||||
Sbjct: 67453 acaaggaagagattgacaa 67471
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>ref|XM_785693.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8472-PA,
           isoform A (LOC585888), mRNA
          Length = 534

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 20  tcttcgacaaggatggcaa 38
           |||||||||||||||||||
Sbjct: 359 tcttcgacaaggatggcaa 377
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>ref|XM_786725.1| PREDICTED: Strongylocentrotus purpuratus similar to axonemal dynein
            heavy chain 7 (LOC586969), partial mRNA
          Length = 3183

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 91   aaggagattgaggacaaga 109
            |||||||||||||||||||
Sbjct: 2695 aaggagattgaggacaaga 2713
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>emb|AL050331.11|HSDJ486I3 Human DNA sequence from clone RP3-486I3 on chromosome 6q22.1-22.3
              Contains the 3' end of a novel gene, a novel gene, the gene
              for KIAA0721 (NAP (Nucleosome Assembly Protein) domain
              containing protein), a novel gene, an RPS5 (40S Ribosomal
              Protein S5) pseudogene, the TSPYL gene for TSPY-like
              (testis specific protein, Y-linked like), the 5' end of a
              novel gene, the 5' end of the SART gene for squamous cell
              carcinoma antigen recognised by T cell and two CpG islands,
              complete sequence
          Length = 118327

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      cccgggctcagcaagttct 22
              |||||||||||||||||||
Sbjct: 107441 cccgggctcagcaagttct 107423
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>ref|XM_792059.1| PREDICTED: Strongylocentrotus purpuratus similar to dynein, axonemal,
            heavy polypeptide 1 (LOC592542), mRNA
          Length = 5355

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 91   aaggagattgaggacaaga 109
            |||||||||||||||||||
Sbjct: 2716 aaggagattgaggacaaga 2734
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>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24
          Length = 75337

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    gattgacaaggagattgag 102
             |||||||||||||||||||
Sbjct: 53208 gattgacaaggagattgag 53226
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>gb|AF232939.1| Bordetella bronchiseptica strain SB22 flagellin gene, partial cds
          Length = 1045

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cttcgacaaggatggcaag 39
           |||||||||||||||||||
Sbjct: 717 cttcgacaaggatggcaag 735
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>gb|AC012472.7| Homo sapiens chromosome 10 clone RP11-71O9, complete sequence
          Length = 148279

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aaggaagagattgacaaggagat 98
             |||||||||||||| ||||||||
Sbjct: 59918 aaggaagagattgagaaggagat 59940
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>gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, complete cds
          Length = 2857

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cttcgacaaggatggcaag 39
           |||||||||||||||||||
Sbjct: 843 cttcgacaaggatggcaag 861
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 76      aaggaagagattgacaagg 94
               |||||||||||||||||||
Sbjct: 2274584 aaggaagagattgacaagg 2274566
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>gb|AC159293.2| Mus musculus BAC clone RP23-282K7 from chromosome 12, complete sequence
          Length = 181226

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 113    cagaattagagcccaaggt 131
              |||||||||||||||||||
Sbjct: 106958 cagaattagagcccaaggt 106976
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 75       caaggaagagattgacaag 93
                |||||||||||||||||||
Sbjct: 12308674 caaggaagagattgacaag 12308656
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>gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, complete sequence
          Length = 173270

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   agaagacagaattagagcc 125
             |||||||||||||||||||
Sbjct: 61526 agaagacagaattagagcc 61508
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>gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15, complete sequence
          Length = 177585

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 81   agagattgacaaggagatt 99
            |||||||||||||||||||
Sbjct: 8875 agagattgacaaggagatt 8893
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 87      tgacaaggagattgaggac 105
               |||||||||||||||||||
Sbjct: 3523227 tgacaaggagattgaggac 3523245
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>gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7p15.1-p13, complete sequence
          Length = 202719

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    agagattgacaaggagatt 99
             |||||||||||||||||||
Sbjct: 58416 agagattgacaaggagatt 58434
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>emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in linkage group 22,
             complete sequence
          Length = 211945

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    gagattgacaaggagattg 100
             |||||||||||||||||||
Sbjct: 51061 gagattgacaaggagattg 51043
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 75       caaggaagagattgacaag 93
                |||||||||||||||||||
Sbjct: 12263044 caaggaagagattgacaag 12263026
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>emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 220294

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    ttgacaaggagattgagga 104
             |||||||||||||||||||
Sbjct: 41569 ttgacaaggagattgagga 41587
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    caaggaagagattgacaag 93
             |||||||||||||||||||
Sbjct: 23039 caaggaagagattgacaag 23021
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>emb|AL807770.17| Mouse DNA sequence from clone RP23-206L14 on chromosome 4, complete
             sequence
          Length = 114089

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 88    gacaaggagattgaggacaagaagaca 114
             ||||||||||| ||||| |||||||||
Sbjct: 19599 gacaaggagatggaggaaaagaagaca 19573
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>gb|AC004800.1|AC004800 Homo sapiens chromosome 7 clone UWGC:g3586a230 from 7p14-15, complete
             sequence
          Length = 43351

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    agagattgacaaggagatt 99
             |||||||||||||||||||
Sbjct: 23920 agagattgacaaggagatt 23938
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     agttcttgaaatccttcaa 74
              |||||||||||||||||||
Sbjct: 587010 agttcttgaaatccttcaa 586992


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,223,276
Number of Sequences: 3902068
Number of extensions: 1223276
Number of successful extensions: 100773
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100541
Number of HSP's gapped (non-prelim): 232
length of query: 134
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 113
effective length of database: 17,151,101,840
effective search space: 1938074507920
effective search space used: 1938074507920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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