ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468353.1| Oryza sativa (japonica cultivar-group), mRNA 319 3e-84
2ref|XM_507039.1| PREDICTED Oryza sativa (japonica cultivar-group... 319 3e-84
3dbj|AK119450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
4dbj|AK065919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 117 2e-23
6dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic D... 117 2e-23
7dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 117 2e-23
8ref|NM_129049.2| Arabidopsis thaliana nucleotidyltransferase/ tr... 92 1e-15
9gb|BT010333.1| Arabidopsis thaliana At2g34970 mRNA, complete cds 92 1e-15
10gb|AY140053.1| Arabidopsis thaliana putative translation initiat... 92 1e-15
11gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map... 92 1e-15
12ref|NM_117940.1| Arabidopsis thaliana translation initiation fac... 70 5e-09
13emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, ... 70 5e-09
14emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome 4, BA... 70 5e-09
15ref|XM_454431.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10637g ... 42 1.1
16emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.1
17ref|XM_625870.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 1.1
18emb|BX640453.23| Zebrafish DNA sequence from clone DKEY-9L5 in l... 40 4.5

>ref|XM_468353.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2590

 Score =  319 bits (161), Expect = 3e-84
 Identities = 278/316 (87%), Gaps = 1/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
            |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 701  ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 760

                                                                        
Query: 86   gcataataacatggaggattgctatattgatgtctgctcgccagaagtccttagtctttt 145
            |||||||||||||||||| |||||||||||| | ||||| |||||||| |||||||||||
Sbjct: 761  gcataataacatggaggactgctatattgatatatgctcaccagaagttcttagtctttt 820

                                                                        
Query: 146  taccgataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttg 205
            ||| |||||||||||||| |||||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 821  tacggataactttgattaccaacatcttcggcgccatttcgttaagggtttacta-gttg 879

                                                                        
Query: 206  atgatattatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaa 265
            ||||||||||||| || ||||| ||||| |||||||||||||| || ||||| || ||||
Sbjct: 880  atgatattatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaa 939

                                                                        
Query: 266  tagatagtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacatacc 325
            |||||| ||| |||||||||||| | ||||| || ||||| || ||||| ||||| ||||
Sbjct: 940  tagataattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttacc 999

                            
Query: 326  ctatggngcctgatgt 341
            |||||| |||||||||
Sbjct: 1000 ctatggtgcctgatgt 1015



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>ref|XM_507039.1| PREDICTED Oryza sativa (japonica cultivar-group), P0016F11.32 mRNA
          Length = 3119

 Score =  319 bits (161), Expect = 3e-84
 Identities = 278/316 (87%), Gaps = 1/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
            |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 701  ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 760

                                                                        
Query: 86   gcataataacatggaggattgctatattgatgtctgctcgccagaagtccttagtctttt 145
            |||||||||||||||||| |||||||||||| | ||||| |||||||| |||||||||||
Sbjct: 761  gcataataacatggaggactgctatattgatatatgctcaccagaagttcttagtctttt 820

                                                                        
Query: 146  taccgataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttg 205
            ||| |||||||||||||| |||||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 821  tacggataactttgattaccaacatcttcggcgccatttcgttaagggtttacta-gttg 879

                                                                        
Query: 206  atgatattatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaa 265
            ||||||||||||| || ||||| ||||| |||||||||||||| || ||||| || ||||
Sbjct: 880  atgatattatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaa 939

                                                                        
Query: 266  tagatagtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacatacc 325
            |||||| ||| |||||||||||| | ||||| || ||||| || ||||| ||||| ||||
Sbjct: 940  tagataattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttacc 999

                            
Query: 326  ctatggngcctgatgt 341
            |||||| |||||||||
Sbjct: 1000 ctatggtgcctgatgt 1015



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>dbj|AK119450.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-D07, full
            insert sequence
          Length = 3119

 Score =  319 bits (161), Expect = 3e-84
 Identities = 278/316 (87%), Gaps = 1/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
            |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 701  ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 760

                                                                        
Query: 86   gcataataacatggaggattgctatattgatgtctgctcgccagaagtccttagtctttt 145
            |||||||||||||||||| |||||||||||| | ||||| |||||||| |||||||||||
Sbjct: 761  gcataataacatggaggactgctatattgatatatgctcaccagaagttcttagtctttt 820

                                                                        
Query: 146  taccgataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttg 205
            ||| |||||||||||||| |||||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 821  tacggataactttgattaccaacatcttcggcgccatttcgttaagggtttacta-gttg 879

                                                                        
Query: 206  atgatattatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaa 265
            ||||||||||||| || ||||| ||||| |||||||||||||| || ||||| || ||||
Sbjct: 880  atgatattatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaa 939

                                                                        
Query: 266  tagatagtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacatacc 325
            |||||| ||| |||||||||||| | ||||| || ||||| || ||||| ||||| ||||
Sbjct: 940  tagataattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttacc 999

                            
Query: 326  ctatggngcctgatgt 341
            |||||| |||||||||
Sbjct: 1000 ctatggtgcctgatgt 1015



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>dbj|AK065919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049P14, full
            insert sequence
          Length = 2589

 Score =  319 bits (161), Expect = 3e-84
 Identities = 278/316 (87%), Gaps = 1/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
            |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 700  ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 759

                                                                        
Query: 86   gcataataacatggaggattgctatattgatgtctgctcgccagaagtccttagtctttt 145
            |||||||||||||||||| |||||||||||| | ||||| |||||||| |||||||||||
Sbjct: 760  gcataataacatggaggactgctatattgatatatgctcaccagaagttcttagtctttt 819

                                                                        
Query: 146  taccgataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttg 205
            ||| |||||||||||||| |||||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 820  tacggataactttgattaccaacatcttcggcgccatttcgttaagggtttacta-gttg 878

                                                                        
Query: 206  atgatattatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaa 265
            ||||||||||||| || ||||| ||||| |||||||||||||| || ||||| || ||||
Sbjct: 879  atgatattatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaa 938

                                                                        
Query: 266  tagatagtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacatacc 325
            |||||| ||| |||||||||||| | ||||| || ||||| || ||||| ||||| ||||
Sbjct: 939  tagataattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttacc 998

                            
Query: 326  ctatggngcctgatgt 341
            |||||| |||||||||
Sbjct: 999  ctatggtgcctgatgt 1014



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  117 bits (59), Expect = 2e-23
 Identities = 99/111 (89%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                            
Query: 100      aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
                |||| |||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 34804100 aggactgctatattgatatatgctcaccagaagttcttagtctttttacggataactttg 34804159

                                                                   
Query: 160      attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgat 210
                |||| |||||||| ||||| ||||| || |||||||||||| |||||||||
Sbjct: 34804160 attaccaacatcttcggcgccatttcgttaagggtttacta-gttgatgat 34804209



 Score =  111 bits (56), Expect = 1e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                            
Query: 211      attatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaatagat 270
                |||||||| || ||||| ||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 34804312 attatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaatagat 34804371

                                                                            
Query: 271      agtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacataccctatg 330
                | ||| |||||||||||| | ||||| || ||||| || ||||| ||||| |||||||||
Sbjct: 34804372 aattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttaccctatg 34804431

                           
Query: 331      gngcctgatgt 341
                | |||||||||
Sbjct: 34804432 gtgcctgatgt 34804442



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 26       ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
                |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 34803875 ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 34803934

                                 
Query: 86       gcataataacatggagg 102
                |||||||||||||||||
Sbjct: 34803935 gcataataacatggagg 34803951



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>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0016F11
          Length = 134907

 Score =  117 bits (59), Expect = 2e-23
 Identities = 99/111 (89%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                          
Query: 100    aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
              |||| |||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 121948 aggactgctatattgatatatgctcaccagaagttcttagtctttttacggataactttg 122007

                                                                 
Query: 160    attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgat 210
              |||| |||||||| ||||| ||||| || |||||||||||| |||||||||
Sbjct: 122008 attaccaacatcttcggcgccatttcgttaagggtttacta-gttgatgat 122057



 Score =  111 bits (56), Expect = 1e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                          
Query: 211    attatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaatagat 270
              |||||||| || ||||| ||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 122160 attatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaatagat 122219

                                                                          
Query: 271    agtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacataccctatg 330
              | ||| |||||||||||| | ||||| || ||||| || ||||| ||||| |||||||||
Sbjct: 122220 aattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttaccctatg 122279

                         
Query: 331    gngcctgatgt 341
              | |||||||||
Sbjct: 122280 gtgcctgatgt 122290



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                          
Query: 26     ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
              |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 121723 ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 121782

                               
Query: 86     gcataataacatggagg 102
              |||||||||||||||||
Sbjct: 121783 gcataataacatggagg 121799



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>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0053L11
          Length = 147123

 Score =  117 bits (59), Expect = 2e-23
 Identities = 99/111 (89%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                         
Query: 100   aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
             |||| |||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 25695 aggactgctatattgatatatgctcaccagaagttcttagtctttttacggataactttg 25754

                                                                
Query: 160   attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgat 210
             |||| |||||||| ||||| ||||| || |||||||||||| |||||||||
Sbjct: 25755 attaccaacatcttcggcgccatttcgttaagggtttacta-gttgatgat 25804



 Score =  111 bits (56), Expect = 1e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                         
Query: 211   attatgggttacaaaatctatactcatgaaatacgctcgagctatgccgcaagaatagat 270
             |||||||| || ||||| ||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 25907 attatggggtataaaatatatacccatgaaatacgctcaagttatgctgccagaatagat 25966

                                                                         
Query: 271   agtttcaggagctatgatgcggtgagcaaagatattatacaaagatggacataccctatg 330
             | ||| |||||||||||| | ||||| || ||||| || ||||| ||||| |||||||||
Sbjct: 25967 aattttaggagctatgatactgtgagtaaggatataattcaaaggtggacttaccctatg 26026

                        
Query: 331   gngcctgatgt 341
             | |||||||||
Sbjct: 26027 gtgcctgatgt 26037



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 26    ctcacacctgtgcgtggcaattgataaggatatactggccaataatcctactctccagtt 85
             |||| ||||||  ||| ||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 25470 ctcaaacctgtatgtgacaattgataaggacatactggccagtaatcctactctccaatt 25529

                              
Query: 86    gcataataacatggagg 102
             |||||||||||||||||
Sbjct: 25530 gcataataacatggagg 25546



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>ref|NM_129049.2| Arabidopsis thaliana nucleotidyltransferase/ translation initiation
           factor AT2G34970 mRNA, complete cds
          Length = 2475

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 131/158 (82%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
           |||||||||| |||||  | || || || ||||| |||||||| |||   ||||||||||
Sbjct: 734 aggattgctacattgacatatgttctcctgaagtgcttagtctctttgaggataactttg 793

                                                                       
Query: 160 attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgatattatgggt 219
           ||||||||||||| || ||||||||||| || ||| | ||  || |||||||||||||||
Sbjct: 794 attatcaacatctgcgtcgtcattttgtcaaaggtgtgct-tgtggatgatattatgggt 852

                                                 
Query: 220 tacaaaatctatactcatgaaatacgctcgagctatgc 257
           || |||||||  |||||||| || | ||||||||||||
Sbjct: 853 tataaaatcttcactcatgagattcactcgagctatgc 890



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>gb|BT010333.1| Arabidopsis thaliana At2g34970 mRNA, complete cds
          Length = 2193

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 131/158 (82%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
           |||||||||| |||||  | || || || ||||| |||||||| |||   ||||||||||
Sbjct: 701 aggattgctacattgacatatgttctcctgaagtgcttagtctctttgaggataactttg 760

                                                                       
Query: 160 attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgatattatgggt 219
           ||||||||||||| || ||||||||||| || ||| | ||  || |||||||||||||||
Sbjct: 761 attatcaacatctgcgtcgtcattttgtcaaaggtgtgct-tgtggatgatattatgggt 819

                                                 
Query: 220 tacaaaatctatactcatgaaatacgctcgagctatgc 257
           || |||||||  |||||||| || | ||||||||||||
Sbjct: 820 tataaaatcttcactcatgagattcactcgagctatgc 857



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>gb|AY140053.1| Arabidopsis thaliana putative translation initiation factor eIF-2B
           epsilon subunit (At2g34970) mRNA, complete cds
          Length = 2474

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 131/158 (82%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
           |||||||||| |||||  | || || || ||||| |||||||| |||   ||||||||||
Sbjct: 734 aggattgctacattgacatatgttctcctgaagtgcttagtctctttgaggataactttg 793

                                                                       
Query: 160 attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgatattatgggt 219
           ||||||||||||| || ||||||||||| || ||| | ||  || |||||||||||||||
Sbjct: 794 attatcaacatctgcgtcgtcattttgtcaaaggtgtgct-tgtggatgatattatgggt 852

                                                 
Query: 220 tacaaaatctatactcatgaaatacgctcgagctatgc 257
           || |||||||  |||||||| || | ||||||||||||
Sbjct: 853 tataaaatcttcactcatgagattcactcgagctatgc 890



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>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
             sequence
          Length = 108484

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 131/158 (82%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                         
Query: 100   aggattgctatattgatgtctgctcgccagaagtccttagtctttttaccgataactttg 159
             |||||||||| |||||  | || || || ||||| |||||||| |||   ||||||||||
Sbjct: 75717 aggattgctacattgacatatgttctcctgaagtgcttagtctctttgaggataactttg 75776

                                                                         
Query: 160   attatcaacatctccggcgtcattttgtaaagggtttactaggttgatgatattatgggt 219
             ||||||||||||| || ||||||||||| || ||| | ||  || |||||||||||||||
Sbjct: 75777 attatcaacatctgcgtcgtcattttgtcaaaggtgtgct-tgtggatgatattatgggt 75835

                                                   
Query: 220   tacaaaatctatactcatgaaatacgctcgagctatgc 257
             || |||||||  |||||||| || | ||||||||||||
Sbjct: 75836 tataaaatcttcactcatgagattcactcgagctatgc 75873



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>ref|NM_117940.1| Arabidopsis thaliana translation initiation factor AT4G18300 mRNA,
           complete cds
          Length = 2130

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                       
Query: 150 gataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttgatga 209
           ||||||||||||||||| ||| | || ||||||||||| || ||||| || | |||||||
Sbjct: 721 gataactttgattatcagcatatgcgccgtcattttgttaatggtttgcttg-ttgatga 779

                          
Query: 210 tattatgggttacaa 224
           |||||||||||||||
Sbjct: 780 tattatgggttacaa 794



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>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48
          Length = 194143

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 150   gataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttgatga 209
             ||||||||||||||||| ||| | || ||||||||||| || ||||| || | |||||||
Sbjct: 86853 gataactttgattatcagcatatgcgccgtcattttgttaatggtttgcttg-ttgatga 86911

                            
Query: 210   tattatgggttacaa 224
             |||||||||||||||
Sbjct: 86912 tattatgggttacaa 86926



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>emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A21 (ESSA project)
          Length = 82697

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 150   gataactttgattatcaacatctccggcgtcattttgtaaagggtttactaggttgatga 209
             ||||||||||||||||| ||| | || ||||||||||| || ||||| || | |||||||
Sbjct: 58466 gataactttgattatcagcatatgcgccgtcattttgttaatggtttgcttg-ttgatga 58524

                            
Query: 210   tattatgggttacaa 224
             |||||||||||||||
Sbjct: 58525 tattatgggttacaa 58539



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>ref|XM_454431.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10637g predicted mRNA
          Length = 2130

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 156  tttgattatcaacatctccgg 176
            |||||||||||||||||||||
Sbjct: 2004 tttgattatcaacatctccgg 2024



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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    tttgattatcaacatctccgg 176
              |||||||||||||||||||||
Sbjct: 940246 tttgattatcaacatctccgg 940266



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>ref|XM_625870.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_2850),
           partial mRNA
          Length = 2058

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ttgcataataacatggaggat 104
           |||||||||||||||||||||
Sbjct: 406 ttgcataataacatggaggat 426



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>emb|BX640453.23| Zebrafish DNA sequence from clone DKEY-9L5 in linkage group 12,
             complete sequence
          Length = 223071

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tgaggataagacagataactcaca 31
             |||| |||||||||||||||||||
Sbjct: 94629 tgagcataagacagataactcaca 94606


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,737,311
Number of Sequences: 3902068
Number of extensions: 2737311
Number of successful extensions: 44883
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44824
Number of HSP's gapped (non-prelim): 48
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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