>emb|AL138773.5| Human DNA sequence from clone RP4-660B20 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 125661

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   attttatagccatgaataaagt 144
             ||||||||||||||||||||||
Sbjct: 57620 attttatagccatgaataaagt 57599

>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence
          Length = 121822

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   atgctaaagcaaatattttat 129
             |||||||||||||||||||||
Sbjct: 94327 atgctaaagcaaatattttat 94307

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   tgctaaagcaaatattttata 130
             |||||||||||||||||||||
Sbjct: 85677 tgctaaagcaaatattttata 85697

>gb|AC072026.13| Homo sapiens 3 BAC RP11-500K19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 131266

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   taaagcaaatattttatagc 132
             ||||||||||||||||||||
Sbjct: 47428 taaagcaaatattttatagc 47409

>emb|AJ421993.1|BMA421993 Brugia malayi phy-1 gene for prolyl 4-hydroxylase, exons 1-12
          Length = 4596

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  ttcatgctaaagcaaatatt 125
            ||||||||||||||||||||
Sbjct: 3578 ttcatgctaaagcaaatatt 3597

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 6       atcgcgtcgtgcgccaaggcgatgccg 32
               ||||||||| |||| ||||||||||||
Sbjct: 3069391 atcgcgtcgagcgcaaaggcgatgccg 3069417

>gb|AC183544.3| Pan troglodytes BAC clone CH251-284N17 from chromosome x, complete
              sequence
          Length = 161059

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    atgctaaagcaaatatttt 127
              |||||||||||||||||||
Sbjct: 135744 atgctaaagcaaatatttt 135762

>gb|AC149234.1| Pan troglodytes chromosome X clone PTB-085L05 map human ortholog q28,
             complete sequence
          Length = 186825

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   aaagcaaatattttatagc 132
             |||||||||||||||||||
Sbjct: 53085 aaagcaaatattttatagc 53067

>gb|AC149233.1| Pan troglodytes chromosome X clone RP43-034P07 map human ortholog q28,
              complete sequence
          Length = 169963

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    aaagcaaatattttatagc 132
              |||||||||||||||||||
Sbjct: 160310 aaagcaaatattttatagc 160292

>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence
          Length = 212318

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    gcaaatattttatagccat 135
              |||||||||||||||||||
Sbjct: 143227 gcaaatattttatagccat 143245

>gb|AC007613.8| Homo sapiens chromosome 16 clone RP11-490O6, complete sequence
          Length = 161146

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    aaatattttatagccatga 137
              |||||||||||||||||||
Sbjct: 117827 aaatattttatagccatga 117845

>emb|BX842700.35| Zebrafish DNA sequence from clone DKEY-2P18 in linkage group 4, complete
              sequence
          Length = 198258

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 124    ttttatagccatgaataaa 142
              |||||||||||||||||||
Sbjct: 184469 ttttatagccatgaataaa 184451

>ref|XM_765823.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_608_11121_12716)
            partial mRNA
          Length = 1596

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 65   gaagggcctcgtcggggca 83
            |||||||||||||||||||
Sbjct: 1168 gaagggcctcgtcggggca 1186

>emb|AL360233.21| Human DNA sequence from clone RP11-198D23 on chromosome 10 Contains
             part of the PARD3 gene for par-3 partitioning defective 3
             homolog (C.elegans) and a transcription elongation factor
             B(SIII) (TCEB2) pseudogene, complete sequence
          Length = 109816

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   atgctaaagcaaatatttt 127
             |||||||||||||||||||
Sbjct: 34790 atgctaaagcaaatatttt 34772

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     gcgccaaggcgatgccgag 34
              |||||||||||||||||||
Sbjct: 323414 gcgccaaggcgatgccgag 323396

>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence
          Length = 243976

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 122   tattttatagccatgaataaagt 144
             ||||||||| |||||||||||||
Sbjct: 82235 tattttatacccatgaataaagt 82213

>gb|AC010654.8|AC010654 Homo sapiens chromosome 16 clone RP11-486I11, complete sequence
          Length = 148412

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 119   aaatattttatagccatga 137
             |||||||||||||||||||
Sbjct: 25545 aaatattttatagccatga 25563

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 119     aaatattttatagccatgaataa 141
               ||||||||||| |||||||||||
Sbjct: 5276586 aaatattttattgccatgaataa 5276608



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 117     gcaaatattttatagccatgaataaag 143
               |||||||||||||  ||||||||||||
Sbjct: 5260807 gcaaatattttattaccatgaataaag 5260833

>gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome 7, complete sequence
          Length = 212264

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    aaatattttatagccatga 137
              |||||||||||||||||||
Sbjct: 140129 aaatattttatagccatga 140147

>gb|AC007226.3|AC007226 Homo sapiens chromosome 16 clone RPCI-11_520B23, complete sequence
          Length = 159613

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    aaatattttatagccatga 137
              |||||||||||||||||||
Sbjct: 122879 aaatattttatagccatga 122861

>gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana BAC F15H18 from chromosome I,
             complete sequence
          Length = 95327

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   attttatagccatgaataa 141
             |||||||||||||||||||
Sbjct: 93267 attttatagccatgaataa 93249

>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I,
             complete sequence
          Length = 92948

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   attttatagccatgaataa 141
             |||||||||||||||||||
Sbjct: 74739 attttatagccatgaataa 74757

>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 96      tggcttcctgttcatgcta 114
               |||||||||||||||||||
Sbjct: 1178025 tggcttcctgttcatgcta 1178043

>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1715_A07
          Length = 130907

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 117    gcaaatattttatagccatgaataaag 143
              |||||||||||||  ||||||||||||
Sbjct: 127521 gcaaatattttattaccatgaataaag 127547

>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0417F02
          Length = 150660

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 119   aaatattttatagccatgaataa 141
             ||||||||||| |||||||||||
Sbjct: 10950 aaatattttattgccatgaataa 10972

>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0589E08
          Length = 138416

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 119   aaatattttatagccatgaataa 141
             ||||||||||| |||||||||||
Sbjct: 75349 aaatattttattgccatgaataa 75371



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 117   gcaaatattttatagccatgaataaag 143
             |||||||||||||  ||||||||||||
Sbjct: 59570 gcaaatattttattaccatgaataaag 59596

>gb|U53327.1|RSU53327 Rhizobium sp. orfZ, NodA, NodF, NodE, NodG, NodB, NodC, NodI, NodJ,
            NodH, NodP, and NodQ genes, complete cds
          Length = 16124

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   ccaaggcgatgccgagtgc 37
            |||||||||||||||||||
Sbjct: 4219 ccaaggcgatgccgagtgc 4237

>emb|BX072557.8| Mouse DNA sequence from clone RP23-79L4 on chromosome X, complete
             sequence
          Length = 198694

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   gcaaatattttatagccat 135
             |||||||||||||||||||
Sbjct: 55549 gcaaatattttatagccat 55567

>gb|AC147614.4| Mus musculus BAC clone RP23-399A18 from 7, complete sequence
          Length = 193777

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    aaatattttatagccatga 137
              |||||||||||||||||||
Sbjct: 134522 aaatattttatagccatga 134504

>gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis gene cluster, complete
             sequence
          Length = 36905

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     ccgcatcgcgtcgtgcgcc 20
             |||||||||||||||||||
Sbjct: 15640 ccgcatcgcgtcgtgcgcc 15622

>emb|AL669836.9| Mouse DNA sequence from clone RP23-79H8 on chromosome 2, complete
             sequence
          Length = 141877

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 87    cttgcttcgtggcttcctgttca 109
             ||||||||| |||||||||||||
Sbjct: 77519 cttgcttcggggcttcctgttca 77541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,403,791
Number of Sequences: 3902068
Number of extensions: 1403791
Number of successful extensions: 99256
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99115
Number of HSP's gapped (non-prelim): 141
length of query: 167
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 145
effective length of database: 17,147,199,772
effective search space: 2486343966940
effective search space used: 2486343966940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)