ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUVH1_ARATH (Q9FF80) Histone-lysine N-methyltransferase, H3 lysi... 28 4.6

>SUVH1_ARATH (Q9FF80) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH1 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 1)
           (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog
           protein 1) (Su(var)3-9 homolog protein 1) (Protein SET
           DOMAIN GR
          Length = 670

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 48  SFSTCSARDRRYTKKEAPGIL--TRLGDIFLVLFSM 149
           S STC  R  R   K+ PGI+    +GD+F   F M
Sbjct: 193 SGSTCMGRGVRTNTKKRPGIVPGVEIGDVFFFRFEM 228


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,121,697
Number of Sequences: 219361
Number of extensions: 776718
Number of successful extensions: 1699
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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