ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Plus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 347 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 406 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 407 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 466 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 467 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 526 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 527 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 586 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 587 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 646 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 647 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 706 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 707 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 766 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 767 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 826 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 827 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 884
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Plus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 3649747 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 3649806 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 3649807 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 3649866 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 3649867 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 3649926 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 3649927 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 3649986 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 3649987 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 3650046 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 3650047 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 3650106 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 3650107 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 3650166 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 3650167 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 3650226 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 3650227 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 3650284 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcttggcatgcctttgatcc 299 |||||||||||||||||||| Sbjct: 9656463 tcttggcatgcctttgatcc 9656482
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Minus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 131630 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 131571 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 131570 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 131511 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 131510 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 131451 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 131450 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 131391 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 131390 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 131331 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 131330 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 131271 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 131270 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 131211 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 131210 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 131151 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 131150 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 131093
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Plus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 3649858 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 3649917 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 3649918 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 3649977 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 3649978 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 3650037 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 3650038 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 3650097 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 3650098 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 3650157 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 3650158 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 3650217 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 3650218 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 3650277 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 3650278 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 3650337 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 3650338 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 3650395 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcttggcatgcctttgatcc 299 |||||||||||||||||||| Sbjct: 9654584 tcttggcatgcctttgatcc 9654603
>dbj|AK121310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112E08, full insert sequence Length = 2085 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Plus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 410 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 469 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 470 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 529 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 530 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 589 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 590 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 649 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 650 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 709 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 710 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 769 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 770 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 829 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 830 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 889 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 890 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 947
>dbj|AK071501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093H18, full insert sequence Length = 1686 Score = 440 bits (222), Expect = e-120 Identities = 459/538 (85%) Strand = Plus / Plus Query: 32 agcgcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctg 91 ||||||| |||||||||||| ||| |||||||||||||||||||| || ||||| |||| Sbjct: 480 agcgcaagtcaaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctg 539 Query: 92 gccttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcacccta 151 |||||||||| ||||| |||||| | || || |||||||| ||||| |||||| | | Sbjct: 540 gccttcctgacgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaa 599 Query: 152 atcttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgc 211 ||||||| || ||||||| | |||| |||||| ||||||||||| || ||||| || Sbjct: 600 atcttcggttagtctgtaaacggtggaaccgactgttatctgggaactattattattcct 659 Query: 212 tgcggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatc 271 |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 660 tgcgtaagaaacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatc 719 Query: 272 agaaactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccg 331 ||| | ||||||||||||||||| ||||| |||||| | |||| ||| || ||||| | Sbjct: 720 ggaagatttcttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccag 779 Query: 332 ttccaccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatt 391 ||||| ||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 780 ttccagcagagtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatc 839 Query: 392 tgtacttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttaca 451 ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || ||||||| Sbjct: 840 tgtacctgtttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttaca 899 Query: 452 atactcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttg 511 || |||||| |||||||||| ||| || ||||||||||||| ||||| |||| |||| Sbjct: 900 atgctcggataaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttg 959 Query: 512 gctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 | || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 960 gttcctgtgtcataaacaaccgcctctatgttgctggtggggagtgtgaagggataca 1017
>ref|NM_196447.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0015J03.3), mRNA Length = 1329 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Plus Query: 35 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 94 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 197 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 256 Query: 95 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 154 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 257 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 316 Query: 155 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 214 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 317 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 376 Query: 215 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 274 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 377 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 436 Query: 275 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 334 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 437 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 496 Query: 335 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 394 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 497 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 556 Query: 395 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 454 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 557 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 616 Query: 455 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 514 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 617 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 676 Query: 515 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 677 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 731
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 35 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 94 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 13714636 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 13714577 Query: 95 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 154 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 13714576 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 13714517 Query: 155 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 214 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 13714516 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 13714457 Query: 215 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 274 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 13714456 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 13714397 Query: 275 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 334 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 13714396 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 13714337 Query: 335 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 394 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 13714336 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 13714277 Query: 395 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 454 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 13714276 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 13714217 Query: 455 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 514 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 13714216 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 13714157 Query: 515 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 13714156 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 13714102
>gb|AC027659.1| Oryza sativa (japonica cultivar-group) BAC nbxb0015J03 chromosome 10, complete sequence Length = 172742 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 35 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 94 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 41165 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 41106 Query: 95 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 154 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 41105 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 41046 Query: 155 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 214 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 41045 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 40986 Query: 215 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 274 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 40985 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 40926 Query: 275 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 334 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 40925 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 40866 Query: 335 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 394 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 40865 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 40806 Query: 395 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 454 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 40805 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 40746 Query: 455 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 514 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 40745 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 40686 Query: 515 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 40685 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 40631
>dbj|AK068671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J20, full insert sequence Length = 2094 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Plus Query: 35 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 94 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 288 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 347 Query: 95 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 154 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 348 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 407 Query: 155 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 214 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 408 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 467 Query: 215 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 274 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 468 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 527 Query: 275 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 334 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 528 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 587 Query: 335 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 394 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 588 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 647 Query: 395 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 454 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 648 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 707 Query: 455 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 514 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 708 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 767 Query: 515 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 768 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 822
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 35 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 94 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 13721978 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 13721919 Query: 95 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 154 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 13721918 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 13721859 Query: 155 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 214 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 13721858 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 13721799 Query: 215 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 274 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 13721798 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 13721739 Query: 275 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 334 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 13721738 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 13721679 Query: 335 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 394 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 13721678 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 13721619 Query: 395 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 454 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 13721618 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 13721559 Query: 455 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 514 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 13721558 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 13721499 Query: 515 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 569 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 13721498 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 13721444
>dbj|AK058303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G06, full insert sequence Length = 1623 Score = 254 bits (128), Expect = 3e-64 Identities = 329/396 (83%) Strand = Plus / Plus Query: 174 atggagccgacttttatctgggaattactattactcgctgcggaagaaatttggcatggc 233 ||||| ||| || |||||||||||||||||||| || |||| |||| | || ||||| Sbjct: 18 atggaaccgtctcttatctgggaattactattattccttgcgcaagagaaacgggatggc 77 Query: 234 agaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactatcttggcatgcctt 293 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||||| Sbjct: 78 ggaagaatgggtttatgtctttaaaagggaccgtgaaggaaagatatcctggcatgcctt 137 Query: 294 tgatccagtgcaccagctctggaggtcgcttcctcccgttccaccagagtattcagaagc 353 ||| ||| |||||||||| |||| ||| ||||| || |||||| |||| ||||||||||| Sbjct: 138 tgacccactgcaccagctatggaagtcacttccaccagttccagcagaatattcagaagc 197 Query: 354 tgtgggctttggttgcgctgttctcagtggctgctatttgtacttatttggaggcaaaga 413 | |||||||| || |||||||| ||||| |||||| ||||||||||||| || || || Sbjct: 198 attaggctttggctgtgctgttctgagtggttgctatctgtacttatttggcggtaagga 257 Query: 414 cccagtacgagggtctatgaggcatgtcgtgttttacaatactcggacaaacaagtggta 473 || | | || |||||||||| ||| || ||||||||| ||||||||||||| ||| | Sbjct: 258 tcctctgaggggctctatgaggcgtgttgtattttacaatgctcggacaaacaaatggca 317 Query: 474 ccgggctccagatatgctacggaagcggcacttatttggctcttgtgtcataaacaactg 533 ||| |||||||||||| ||||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 318 ccgagctccagatatgttacggaaacgacacttttttggttcttgtgtcataaacaattg 377 Query: 534 cctctatgttgccggtggggagtgtgaagggataca 569 | | |||||||| ||||||||||||||||| ||||| Sbjct: 378 cttgtatgttgctggtggggagtgtgaaggaataca 413
>gb|AY108949.1| Zea mays PCO137944 mRNA sequence Length = 1182 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 427 tctatgaggcatgtcgtgttttacaatactcggacaaacaagtggtaccgggctccagat 486 |||||||||| ||| || || |||||| |||| |||||||| ||| |||||||||| ||| Sbjct: 51 tctatgaggcgtgttgtattctacaatgctcgtacaaacaaatggcaccgggctccggat 110 Query: 487 atgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgttgcc 546 ||| | |||| || ||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 111 atgatgaggaaacgtcacttttttggttcttgtgtaataaacaattgtctctatgttgct 170 Query: 547 ggtggggagtgtgaagggataca 569 || || ||||||||||| ||||| Sbjct: 171 ggaggagagtgtgaaggaataca 193
>ref|NM_104402.2| Arabidopsis thaliana unknown protein AT1G55270 mRNA, complete cds Length = 2783 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 484 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 543 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 845 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 904 Query: 544 gccggtggggagtgtgaagg 563 || ||||||||||||||||| Sbjct: 905 gcgggtggggagtgtgaagg 924 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 tattcagaagctgtgggctttggttgcgctgtt 375 |||||||| ||||| || ||||||||||||||| Sbjct: 704 tattcagaggctgttgggtttggttgcgctgtt 736 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 235 gaagaatgggtttacgtcttcaaaagggatcgtgat 270 |||||||||||||| || || ||||| ||||||||| Sbjct: 596 gaagaatgggtttatgtttttaaaagagatcgtgat 631
>gb|AY051069.1| Arabidopsis thaliana unknown protein (At1g55270) mRNA, complete cds Length = 1336 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 484 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 543 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 634 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 693 Query: 544 gccggtggggagtgtgaagg 563 || ||||||||||||||||| Sbjct: 694 gcgggtggggagtgtgaagg 713 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 tattcagaagctgtgggctttggttgcgctgtt 375 |||||||| ||||| || ||||||||||||||| Sbjct: 493 tattcagaggctgttgggtttggttgcgctgtt 525 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 235 gaagaatgggtttacgtcttcaaaagggatcgtgat 270 |||||||||||||| || || ||||| ||||||||| Sbjct: 385 gaagaatgggtttatgtttttaaaagagatcgtgat 420
>gb|AF370138.1| Arabidopsis thaliana unknown protein (At1g55270) mRNA, complete cds Length = 1878 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 484 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 543 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 845 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 904 Query: 544 gccggtggggagtgtgaagg 563 || ||||||||||||||||| Sbjct: 905 gcgggtggggagtgtgaagg 924 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 tattcagaagctgtgggctttggttgcgctgtt 375 |||||||| ||||| || ||||||||||||||| Sbjct: 704 tattcagaggctgttgggtttggttgcgctgtt 736 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 235 gaagaatgggtttacgtcttcaaaagggatcgtgat 270 |||||||||||||| || || ||||| ||||||||| Sbjct: 596 gaagaatgggtttatgtttttaaaagagatcgtgat 631
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence Length = 101954 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 484 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 543 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 59417 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 59476 Query: 544 gccggtggggagtgtgaagg 563 || ||||||||||||||||| Sbjct: 59477 gcgggtggggagtgtgaagg 59496 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 tattcagaagctgtgggctttggttgcgctgtt 375 |||||||| ||||| || ||||||||||||||| Sbjct: 59276 tattcagaggctgttgggtttggttgcgctgtt 59308 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 235 gaagaatgggtttacgtcttcaaaagggatcgtgat 270 |||||||||||||| || || ||||| ||||||||| Sbjct: 59168 gaagaatgggtttatgtttttaaaagagatcgtgat 59203
>gb|AC150706.4| Medicago truncatula clone mth2-132l18, complete sequence Length = 105472 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 224 ttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtga 269 |||| |||||||||||||||||||| ||| ||||||| || ||||| Sbjct: 19168 ttggaatggcagaagaatgggtttatgtcatcaaaagagaccgtga 19123 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 508 tttggctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagg 563 ||||| ||||| || || || ||||||||||||||||| |||||||| ||| |||| Sbjct: 18884 tttggttcttgcgtaatgaataactgcctctatgttgcaggtggggaatgtaaagg 18829
>gb|AC020713.7| Homo sapiens BAC clone RP11-439B18 from 4, complete sequence Length = 187350 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 270 tcagaaactatcttggcatgcctttgatc 298 ||||||| ||||||||||||||||||||| Sbjct: 4077 tcagaaaatatcttggcatgcctttgatc 4049
>gb|AC141470.4| Mus musculus BAC clone RP24-566E24 from chromosome Y, complete sequence Length = 197634 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 217 aagaaatttggcatggcagaagaatgggttt 247 ||||||||||||||||||| ||||||||||| Sbjct: 90751 aagaaatttggcatggcag-agaatgggttt 90780
>emb|AL670379.17| Human DNA sequence from clone RP6-166C19 on chromosome X Contains the gene for a novel protein similar to Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (LOC347458), ten copies of the gene for a novel protein similar to LOC347458, the 5' end of the gene for a novel protein similar to LOC347458 and twelve CpG islands, complete sequence Length = 75160 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 74700 cagaaaatatcttggcatgcctttga 74725
>emb|AL031846.2|HS742C19 Human DNA sequence from clone RP4-742C19 on chromosome 22q12.3-13.1, complete sequence Length = 122748 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 3878 cagaaaatatcttggcatgcctttga 3853
>gb|AC037459.16| Homo sapiens chromosome 8, clone RP11-582J16, complete sequence Length = 174888 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 5921 cagaaaatatcttggcatgcctttga 5946
>gb|AC006144.1|AC006144 Homo sapiens PAC clone RP1-296G17 from Xq23, complete sequence Length = 81184 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 1540 cagaaaatatcttggcatgcctttga 1565
>gb|AC087854.11| Homo sapiens chromosome 8, clone RP11-382J24, complete sequence Length = 157419 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 39823 cagaaaatatcttggcatgcctttga 39798
>emb|AL627142.9| Human DNA sequence from clone RP11-632N11 on chromosome X, complete sequence Length = 5573 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cagaaactatcttggcatgcctttga 296 |||||| ||||||||||||||||||| Sbjct: 5107 cagaaaatatcttggcatgcctttga 5132
>ref|NM_191764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 1135 gaagctgtgggctttggttgc 1155
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 29836369 gaagctgtgggctttggttgc 29836349
>gb|AC064859.6| Homo sapiens BAC clone RP11-329A6 from 2, complete sequence Length = 112105 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 agaaatttggcatggcagaag 238 ||||||||||||||||||||| Sbjct: 77667 agaaatttggcatggcagaag 77687
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 80464 gaagctgtgggctttggttgc 80444
>dbj|AK098914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I15, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 1534 gaagctgtgggctttggttgc 1554
>dbj|AK071968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081L11, full insert sequence Length = 1734 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 1536 gaagctgtgggctttggttgc 1556
>dbj|AK062152.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H06, full insert sequence Length = 610 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gaagctgtgggctttggttgc 369 ||||||||||||||||||||| Sbjct: 412 gaagctgtgggctttggttgc 432
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 ggaattactattactcgctgc 214 ||||||||||||||||||||| Sbjct: 531854 ggaattactattactcgctgc 531874
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcctggccttcctgatgacc 106 |||||||||||||||||||| Sbjct: 95336 gcctggccttcctgatgacc 95317
>ref|XM_493838.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcttggcatgcctttgatcc 299 |||||||||||||||||||| Sbjct: 295 tcttggcatgcctttgatcc 276
>gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence Length = 211388 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tcagaagctgtgggctttgg 365 |||||||||||||||||||| Sbjct: 62099 tcagaagctgtgggctttgg 62118
>gb|AC125080.3| Mus musculus BAC clone RP24-68P23 from chromosome 16, complete sequence Length = 181087 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aagaatgggtttacgtcttcaaaa 259 |||||||||||| ||||||||||| Sbjct: 14053 aagaatgggttttcgtcttcaaaa 14030
>emb|CR636080.2|CNS0EPRQ Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aggagaggtgccgaactcag 75 |||||||||||||||||||| Sbjct: 888 aggagaggtgccgaactcag 907
>emb|AL450063.14| Human DNA sequence from clone RP11-82H13 on chromosome 1 Contains the 3' end of the PRKACB gene for cAMP-dependent catalytic protein kinase beta and a neural precursor cell expressed developmentally down-regulated 8 (NEDD8) pseudogene, complete sequence Length = 130878 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 tcagaaactatcttggcatgcctt 293 ||||||| |||||||||||||||| Sbjct: 63784 tcagaaaatatcttggcatgcctt 63807
>emb|AL035531.17|HS483L3 Human DNA sequence from clone RP3-483L3 on chromosome 6p25.1-25.3, complete sequence Length = 74513 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggaggtcgcttcctcccgttcca 336 ||||||||||| |||||||||||| Sbjct: 11806 tggaggtcgctacctcccgttcca 11829
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcttggcatgcctttgatcc 299 |||||||||||||||||||| Sbjct: 77362 tcttggcatgcctttgatcc 77381
>emb|Z69944.1|SPAC1F12 S.pombe chromosome I cosmid c1F12 Length = 14399 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tggtctgtagaaaatggagc 180 |||||||||||||||||||| Sbjct: 3554 tggtctgtagaaaatggagc 3535
>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 caccagagtattcagaagct 354 |||||||||||||||||||| Sbjct: 81665 caccagagtattcagaagct 81684
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcttctgcctggccttcctg 100 |||||||||||||||||||| Sbjct: 161551 gcttctgcctggccttcctg 161532
>gb|AC024375.13| Homo sapiens chromosome 15, clone RP11-572A8, complete sequence Length = 163775 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcttctgcctggccttcctg 100 |||||||||||||||||||| Sbjct: 36319 gcttctgcctggccttcctg 36300
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 cggcacttatttggctcttg 518 |||||||||||||||||||| Sbjct: 60033 cggcacttatttggctcttg 60052
>gb|AC182736.3| Pan troglodytes BAC clone CH251-15A9 from chromosome 7, complete sequence Length = 181648 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tcagaaactatcttggcatgcctt 293 ||||||| |||||||||||||||| Sbjct: 135539 tcagaaaatatcttggcatgcctt 135516
>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21, complete sequence Length = 185548 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 caccagagtattcagaagct 354 |||||||||||||||||||| Sbjct: 12335 caccagagtattcagaagct 12354
>gb|AC006943.25| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-602f10, complete sequence Length = 84034 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 caccagagtattcagaagct 354 |||||||||||||||||||| Sbjct: 6192 caccagagtattcagaagct 6173
>gb|AF319992.1|AF319992 Oryzias latipes strain Carbio DMRT2 gene, partial cds Length = 2197 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tcaggcgccgcttctgcctg 91 |||||||||||||||||||| Sbjct: 23 tcaggcgccgcttctgcctg 4
>ref|NM_001019751.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1F12.04c), partial mRNA Length = 576 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tggtctgtagaaaatggagc 180 |||||||||||||||||||| Sbjct: 460 tggtctgtagaaaatggagc 479
>gb|AC135628.8| Homo sapiens chromosome 15, clone RP11-883G10, complete sequence Length = 137088 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcttctgcctggccttcctg 100 |||||||||||||||||||| Sbjct: 49858 gcttctgcctggccttcctg 49839
>dbj|AP003733.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-810P12, complete sequence Length = 166867 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 gagggtctatgaggcatgtc 441 |||||||||||||||||||| Sbjct: 65482 gagggtctatgaggcatgtc 65501
>gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, complete sequence Length = 191894 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 aagaatgggtttacgtcttcaaaa 259 |||||||||||| ||||||||||| Sbjct: 147131 aagaatgggttttcgtcttcaaaa 147108
>gb|AC157495.2| Gallus gallus BAC clone CH261-13P20 from chromosome unknown, complete sequence Length = 228855 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggcagaagaatgggtttacg 250 |||||||||||||||||||| Sbjct: 914 ggcagaagaatgggtttacg 933 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,131,518 Number of Sequences: 3902068 Number of extensions: 4131518 Number of successful extensions: 75659 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75420 Number of HSP's gapped (non-prelim): 228 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
