ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20b03 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 80.1 bits (196), Expect = 3e-15 Identities = 40/86 (46%), Positives = 55/86 (63%) Frame = +1 Query: 1 TSAQPPMDLFDKIEVSATQSGFHVQRAHSKLKIXXXXXXXXXXXXFLVCAEVFELGPSLH 180 TS DL +KIE + T+ GF VQ+ H+KL++ V AEVFE+ PSL+ Sbjct: 349 TSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKGQVGLSVTAEVFEIKPSLN 408 Query: 181 VVELRKSHGDTAVYRQLCDRISSDLG 258 VVELRKS+GD+ +YRQL +R+ D+G Sbjct: 409 VVELRKSYGDSCLYRQLYERLLKDVG 434
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 55.8 bits (133), Expect = 7e-08 Identities = 30/85 (35%), Positives = 48/85 (56%) Frame = +1 Query: 1 TSAQPPMDLFDKIEVSATQSGFHVQRAHSKLKIXXXXXXXXXXXXFLVCAEVFELGPSLH 180 TS PP ++ KIE +A GF +Q+ + K+++ V EVF++ PSLH Sbjct: 349 TSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLN--VATEVFQVAPSLH 406 Query: 181 VVELRKSHGDTAVYRQLCDRISSDL 255 VVEL+K+ GDT +++ +S+ L Sbjct: 407 VVELKKAKGDTLEFQKFYRTLSTQL 431
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 39.7 bits (91), Expect = 0.005 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +1 Query: 139 LVCAEVFELGPSLHVVELRKSHGDTAVYRQL 231 +V AEVFE+ PS H+V L+KS GDTA Y+++ Sbjct: 374 VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRV 404
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = +1 Query: 4 SAQPPMDLFDKIEVSATQSGFHVQRAHSKLKIXXXXXXXXXXXXFLVCAEVFELGPSLHV 183 S + P ++ IE A GF + K ++ ++ E++E+ PSL + Sbjct: 343 SRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVI--EIYEVAPSLFM 400 Query: 184 VELRKSHGDTAVYRQLCDRISSDL 255 V++RK+ G+T Y + ++ S L Sbjct: 401 VDVRKAAGETLEYHKFYKKLCSKL 424
>DC4C_ACIAD (P20370) 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) (CMD)| Length = 134 Score = 35.4 bits (80), Expect = 0.098 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = -2 Query: 291 ELRPHPKNLVNSQVTRDPVAELSVHCSVTMGLP 193 ELR H + N+ VT+D + EL +HCS+ GLP Sbjct: 76 ELRMHLRACFNNGVTKDELKELILHCSLYAGLP 108
>DNAK_BORGA (Q661A3) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 635 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ EHG P V + + RT PS+V T Sbjct: 14 SCVAIMEHGKPVVIQNSEGGRTTPSIVAYT 43
>DNAK_BORBU (P28608) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 635 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ EHG P V + + RT PS+V T Sbjct: 14 SCVAIMEHGKPVVIQNSEGGRTTPSIVAYT 43
>NUCC_ARATH (P56753) NAD(P)H-quinone oxidoreductase chain H, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) Length = 393 Score = 31.2 bits (69), Expect = 1.9 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Frame = -3 Query: 395 RPTTSCQLGYLQHSTHHKATSGVAALLSKL-GRLSSNCDPIPKILSIPRSLEILSQSCLY 219 RP T L + HH + GV L+ L G +C+PI L R +E ++++ Sbjct: 3 RPVTGKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLH--RGMEKIAENRAI 60 Query: 218 TAVSP----WDFLSSTTCREGPSSNTSAQTKNGVGLFGPLQLP 102 P WD+L++ T A T NG G +Q+P Sbjct: 61 IQYLPYVTRWDYLATMF--------TEAITVNGPEQLGNIQVP 95
>SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin)| Length = 803 Score = 31.2 bits (69), Expect = 1.9 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Frame = -3 Query: 395 RPTTSCQLGYLQHSTHHKATSG------VAALLSKLGRLSSNCDPIPK--------ILSI 258 RP TS L H T G ++ ++ R C+ IP +++ Sbjct: 372 RPLTS-----LDHPQSPSMTRGGPIIPIARVVIERIARKGEQCNIIPDNVDDIVADLVTE 426 Query: 257 PRSLEILSQSCLYTAVSPWDFLSSTTCREG 168 + + ++C+Y+ SPW SS TC +G Sbjct: 427 EKDEDDTPETCIYSNWSPWSACSSATCDKG 456
>VG04_BPMD2 (O64200) Gene 4 protein (Gp4)| Length = 98 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -1 Query: 343 RQPVVSR---LCCPSSGGCRRTATPSQKSCQFPGHSRSCRRAVCTLQCHHGTS*APQHAE 173 R PV+S LC GC R AT HSRS +A+C + CH S A A Sbjct: 21 RLPVLSAAGWLCEVDGPGCVRAATDVDHKKPGNDHSRSNLQAICRV-CHGKKSAAEGVAR 79 Query: 172 RGQAQTPRHR 143 R + + R R Sbjct: 80 RRELKARRKR 89
>DNAK_PROAC (Q9L7P1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 617 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G PTV + RT PSVV T Sbjct: 14 SCVAVLEGGEPTVIPNAEGARTTPSVVAFT 43
>DNAK2_PROMP (Q7UZG3) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 634 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G PTV + RT PSVV T Sbjct: 14 SCVAVMEGGKPTVIANAEGFRTTPSVVAYT 43
>SPON1_CHICK (Q9W770) Spondin-1 precursor (F-spondin)| Length = 802 Score = 30.0 bits (66), Expect = 4.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 233 QSCLYTAVSPWDFLSSTTCREG 168 ++C+Y+ SPW SS+TC +G Sbjct: 436 ETCIYSNWSPWSACSSSTCEKG 457
>ENV_HV1RH (P04579) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 865 Score = 30.0 bits (66), Expect = 4.1 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 143 SVPRCLSLAPLCMLWSLGSPMVTLQCTDSSATGSRVT 253 S+ C+ L PLC VTL CTD++ G+ VT Sbjct: 114 SLKPCVKLTPLC---------VTLNCTDANLNGTNVT 141
>SPON1_RAT (P35446) Spondin-1 precursor (F-spondin)| Length = 807 Score = 30.0 bits (66), Expect = 4.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 233 QSCLYTAVSPWDFLSSTTCREG 168 ++C+Y+ SPW SS+TC +G Sbjct: 441 ETCIYSNWSPWSACSSSTCEKG 462
>SPON1_MOUSE (Q8VCC9) Spondin-1 precursor (F-spondin)| Length = 807 Score = 30.0 bits (66), Expect = 4.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 233 QSCLYTAVSPWDFLSSTTCREG 168 ++C+Y+ SPW SS+TC +G Sbjct: 441 ETCIYSNWSPWSACSSSTCEKG 462
>DNAK2_SYNEL (Q8DI58) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 640 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G PTV + RT PSVV T Sbjct: 14 SCVAVMEGGKPTVIANAEGFRTTPSVVAYT 43
>DNAK2_PROMA (Q7V9G2) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 633 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G PTV + RT PSVV T Sbjct: 14 SCVAVMEGGKPTVIANAEGFRTTPSVVAYT 43
>DNAK_PROMT (Q46I76) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 630 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G PTV + RT PSVV T Sbjct: 14 SCVAVMEGGKPTVIANAEGFRTTPSVVAYT 43
>VG04_BPML5 (Q05251) Gene 4 protein (Gp4)| Length = 98 Score = 29.6 bits (65), Expect = 5.4 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -1 Query: 343 RQPVVSR---LCCPSSGGCRRTATPSQKSCQFPGHSRSCRRAVCTLQCHHGTS*APQHAE 173 R PV+S LC + GC R AT + HSRS +A C + CH S A A Sbjct: 21 RLPVLSAANWLCQINGPGCVRAATDVDHIKRGNDHSRSNLQAACHV-CHGKKSAAEGVAR 79 Query: 172 RGQAQTPRHR 143 R + + R R Sbjct: 80 RRELRARRKR 89
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 29.6 bits (65), Expect = 5.4 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 9/74 (12%) Frame = -1 Query: 316 CPSSGGCRRTATPSQKSCQFPGHSRSCRRAVCTLQCHH---------GTS*APQHAERGQ 164 CP GG R TPS +C R+C A T C T + R Sbjct: 634 CPGGGGEGRLMTPSSAAC------RTCWAACATSWCRTPSTTPRSWCSTPTRMEPCGRRC 687 Query: 163 AQTPRHRLRMVWGC 122 + TP R R W C Sbjct: 688 STTPSCRRRSTWSC 701
>DNAK_APHHA (O52960) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 721 Score = 29.6 bits (65), Expect = 5.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C+A+ E G P V ++ RT PS+V T Sbjct: 14 SCFAVLEGGKPLVIENVEGGRTTPSIVAFT 43
>FLO9_YEAST (P39712) Flocculation protein FLO9 precursor| Length = 1322 Score = 29.6 bits (65), Expect = 5.4 Identities = 26/99 (26%), Positives = 44/99 (44%) Frame = -2 Query: 489 IISSFMLDSDVYDPSPYTTIVISNQ*TTMVLASYNIMSVGVPTAQHSSQGNQWCRGSAVQ 310 + SS + S V S ++ VIS+ T+ + S + S +PT+ +S ++ GSA Sbjct: 912 VTSSLVTSSPVISSSFISSPVISSTTTSASILSESSKSSVIPTSSSTSGSSESETGSASS 971 Query: 309 AREVVVELRPHPKNLVNSQVTRDPVAELSVHCSVTMGLP 193 A PK+ +S + PV + +T LP Sbjct: 972 ASSSSSISSESPKSTYSSS-SLPPVTSATTSQEITSSLP 1009
>FUS1_YEAST (P11710) Nuclear fusion protein FUS1| Length = 512 Score = 29.6 bits (65), Expect = 5.4 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = -2 Query: 417 Q*TTMVLASYNIMSVGVPTAQHSSQGNQWCRGSAVQAREVVVELRPHPKNLVNSQVTRDP 238 Q TT VL + MS + + SSQ + S + +R P NL+ S V P Sbjct: 7 QTTTTVLTTVAAMSTTLASNYISSQASS--STSVTTVTTIATSIRSTPSNLLFSNVAAQP 64 Query: 237 VAELSVHCSVTMGLP 193 + + +++GLP Sbjct: 65 KSSSASTIGLSIGLP 79
>LCE3A_HUMAN (Q5TA76) Late cornified envelope protein 3A (Late envelope protein| 13) Length = 89 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 337 PVVSRLCCPSSGGCRRTATPSQKSCQFPGHSRSCRRA 227 P S C PSSGGC S++SC H CRR+ Sbjct: 26 PPASSSCAPSSGGC---GPSSERSCCLSHH--RCRRS 57
>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)| Length = 700 Score = 29.3 bits (64), Expect = 7.1 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 328 SRLCCPSSGGCRRTATPSQKSCQFPGHSRS-CRRAVCTLQCHHG 200 SRLC +G C TP+ K C PG CR A C C HG Sbjct: 609 SRLC--RNGYC----TPTGKCCCSPGWEGDFCRTAKCEPACRHG 646
>SPON1_HUMAN (Q9HCB6) Spondin-1 precursor (F-spondin) (Vascular smooth muscle| cell growth-promoting factor) Length = 807 Score = 29.3 bits (64), Expect = 7.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 233 QSCLYTAVSPWDFLSSTTCREG 168 ++C+Y+ SPW SS+TC +G Sbjct: 441 ETCIYSNWSPWSACSSSTCDKG 462
>SPON1_BOVIN (Q9GLX9) Spondin-1 precursor (F-spondin) (Vascular smooth muscle| cell growth-promoting factor) Length = 807 Score = 29.3 bits (64), Expect = 7.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 233 QSCLYTAVSPWDFLSSTTCREG 168 ++C+Y+ SPW SS+TC +G Sbjct: 441 ETCIYSNWSPWSACSSSTCDKG 462
>REV_HV1C4 (P05865) REV protein (Anti-repression transactivator protein)| (ART/TRS) Length = 116 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 66 PCSESA*QAQNNRQLQWTEQPHTILSLCRGV*AWPLSACCG 188 P E QA+ NR+ +W E+ I S+ AW LS C G Sbjct: 29 PKPEGTRQARRNRRRRWRERQRRIHSIS----AWLLSTCLG 65
>DNAK2_SYNPX (Q7U3C4) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat| shock 70 kDa protein 2) (HSP70-2) Length = 637 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C ++ E G PTV + RT PSVV T Sbjct: 14 SCVSVMEGGKPTVIANAEGFRTTPSVVAYT 43
>POLG_BTMV (Q6XW15) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral gen Length = 3085 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -3 Query: 194 LSSTTCREGPSSNTSAQTKNGVGLFGPL 111 +SS CR SN +AQT GVG FGPL Sbjct: 2060 ISSVVCRLTNDSNGNAQTLYGVG-FGPL 2086
>ALM1_SCHPO (Q9UTK5) Abnormal long morphology protein 1 (Sp8)| Length = 1727 Score = 28.9 bits (63), Expect = 9.2 Identities = 27/92 (29%), Positives = 41/92 (44%) Frame = -3 Query: 386 TSCQLGYLQHSTHHKATSGVAALLSKLGRLSSNCDPIPKILSIPRSLEILSQSCLYTAVS 207 T +L L S + S VAAL KL S + + + L+ + ++S++ L Sbjct: 283 TQKRLTALWESKSSELQSEVAALQEKLTSQQSLYNNVTEELNNNKQQLLISENSLRELQE 342 Query: 206 PWDFLSSTTCREGPSSNTSAQTKNGVGLFGPL 111 +D + S + NTS GVGLF PL Sbjct: 343 KYDSVVSELQVVKENKNTSVSA--GVGLFSPL 372
>DNAK_THIDA (Q3SIN4) Chaperone protein dnaK (Heat shock protein 70) (Heat| shock 70 kDa protein) (HSP70) Length = 639 Score = 28.9 bits (63), Expect = 9.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVV 11 +C A+ E+G+P V + RT PS+V Sbjct: 14 SCVAVMENGSPKVIENAEGARTTPSIV 40
>DNAK_ZYMMO (Q5NPS6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 635 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 91 ACYALSEHGTPTVSRTLQSCRTNPSVVVLT 2 +C A+ E G P V + RT PS+V T Sbjct: 14 SCVAVMEGGQPKVIENAEGARTTPSIVAFT 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,222,979 Number of Sequences: 219361 Number of extensions: 1578713 Number of successful extensions: 5052 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4877 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5048 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
