ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20a17 |
|---|---|
| Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 426 bits (1094), Expect = e-119 Identities = 196/207 (94%), Positives = 198/207 (95%), Gaps = 1/207 (0%) Frame = +2 Query: 26 QKPYMVEAATRE-GLANTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRF 202 +KPYMV + E NTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRF Sbjct: 115 KKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRF 174 Query: 203 CVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPE 382 CVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPE Sbjct: 175 CVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPE 234 Query: 383 GRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGG 562 GRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGG Sbjct: 235 GRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGG 294 Query: 563 SHLSSYTTXIPKWSIFRDHDYGFTKLT 643 SHLSSYTT IPKWSIFRDHDYGFTKLT Sbjct: 295 SHLSSYTTAIPKWSIFRDHDYGFTKLT 321
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 65.9 bits (159), Expect = 1e-10 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 11/174 (6%) Frame = +2 Query: 140 YYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAH 319 Y +++ + FWY + V S + + TPQYK++E+ L V+R PWLI H Sbjct: 254 YKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMH 313 Query: 320 RVLGYSSNSWYADQG-SFEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERTCPLYQSQCV 493 + WY + E E + + W +Y+VD+ + GHVH YER+ + Sbjct: 314 -------SPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERS-----ERVS 361 Query: 494 NADKTHYSG------TMNGTIFVVAGGGGS---HLSSYTTXIPKWSIFRDHDYG 628 N +G + +++ G GG+ ++ T PK+S FR+ +G Sbjct: 362 NVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFG 415
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 62.8 bits (151), Expect = 8e-10 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 1/110 (0%) Frame = +2 Query: 140 YYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAH 319 Y +++ + FWY + V S + GTPQY ++++ L V R PWLI H Sbjct: 227 YEASQSTSPFWYSIKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMH 286 Query: 320 RVLGYSSNSWYADQGSFEEPEGRESLQKLW-QRYRVDIAYFGHVHNYERT 466 L S N F E E + + W +Y+VD+ + GHVH YER+ Sbjct: 287 SPLYNSYNH------HFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS 330
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 58.5 bits (140), Expect = 2e-08 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 9/162 (5%) Frame = +2 Query: 170 WYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSW 349 WY + V + TPQYK++E+ L V+R PWLI H YSS Sbjct: 270 WYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPF-YSSYVH 328 Query: 350 YADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTM- 526 + +G R ++ + +Y+VD+ + GHVH YER+ + N +G Sbjct: 329 HYMEGE----TLRVMYEQWFVKYKVDVVFAGHVHAYERS-----ERVSNIAYNIVNGLCE 379 Query: 527 -----NGTIFVVAGGGGSHLSSYTTXI---PKWSIFRDHDYG 628 + I++ G GG+ T + PK+S FR+ +G Sbjct: 380 PISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFG 421
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 56.2 bits (134), Expect = 8e-08 Identities = 52/212 (24%), Positives = 79/212 (37%), Gaps = 52/212 (24%) Frame = +2 Query: 164 NFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEEC------------------------- 268 NFWY DYG+ F D E D+ +P++ F E+ Sbjct: 372 NFWYSFDYGLAHFVSIDGETDFAN-SPEWNFAEDVTGNETLPSESETFITDSGPFGNVNG 430 Query: 269 -----------------LSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESL 397 L+ VDR PW+I +HR + S+ S Y + RE+ Sbjct: 431 SVHETKSYEQWHWLQQDLAKVDRSKTPWVIVMSHRPMYSSAYSSY-------QLHVREAF 483 Query: 398 QKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAGGGG 562 + L +Y VD GH+H YER PL + ++ + T+Y+ ++ G G Sbjct: 484 EGLLLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAG 543 Query: 563 -----SHLSSYTTXIPKWSIFRDHDYGFTKLT 643 S S ++ YGF+KLT Sbjct: 544 NIESHSEFSDGEGLTNITALLDKVHYGFSKLT 575
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 45.1 bits (105), Expect = 2e-04 Identities = 57/265 (21%), Positives = 94/265 (35%), Gaps = 59/265 (22%) Frame = +2 Query: 14 RTRRQKPYMVEAATREGLANTGG--------FFDVKDSGGECGVPAETMYYYPAENRANF 169 R+ R +P+M A E G +F V DSG + Sbjct: 240 RSARYRPWMPAAGNHENEVGNGPIGYDAYQTYFAVPDSGS-------------SPQLRGL 286 Query: 170 WYKVDYGMFRF--------CVGDSEHDW---REGTPQYKFIEECLSTVDRKHQ-PWLIFT 313 WY G R C D + + G Q ++++ L+ R + W++ Sbjct: 287 WYSFTAGSVRVISLHNDDVCYQDGGNSYVRGYSGGEQRRWLQAELANARRDSEIDWVVVC 346 Query: 314 AHRV-LGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQC 490 H+ + + ++ AD G R+ L+ +Y+VD+ GH H+YER+ PL + Sbjct: 347 MHQTAISTADDNNGADLGI------RQEWLPLFDQYQVDLVVCGHEHHYERSHPLRGALG 400 Query: 491 VNA-------DKTHYSGTMNGTIFVVAGGGGSHLSSYTTXIPK----------------- 598 + ++ + GT+ +V GGGG+ + P+ Sbjct: 401 TDTRTPIPVDTRSDLIDSTRGTVHLVIGGGGTSKPTNALLFPQPRCQVITGVGDFDPAIR 460 Query: 599 ------------WSIFRDHD--YGF 631 WS FRD D YGF Sbjct: 461 RKPSIFVLEDAPWSAFRDRDNPYGF 485
>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC| 3.1.3.2) (Acid phosphatase PII) Length = 436 Score = 34.7 bits (78), Expect = 0.25 Identities = 21/87 (24%), Positives = 36/87 (41%) Frame = +2 Query: 164 NFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSN 343 NFWY DYG+ F D E D+ +P++ F E+ T + L + Sbjct: 247 NFWYSFDYGLAHFVSIDGETDF-ANSPEWNFAED--------------VTGNETLPSEAE 291 Query: 344 SWYADQGSFEEPEGRESLQKLWQRYRV 424 ++ D G F G K ++++ + Sbjct: 292 TFITDSGPFGNVNGSVHETKSYEQWHL 318
>GLGB_LACAC (Q5FL68) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 638 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 116 GVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEE 265 G P E + A ++ N D+ FC+ D + +GTP Y+F E+ Sbjct: 211 GTPRELQDFVEACHKENIGVLADWVPGHFCINDDALAYYDGTPCYEFSEK 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,454,025 Number of Sequences: 219361 Number of extensions: 1469731 Number of successful extensions: 4350 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4345 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
