| Clone Name | baal20a14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068D19, full insert sequence Length = 801 Score = 137 bits (69), Expect = 9e-30 Identities = 98/108 (90%) Strand = Plus / Plus Query: 24 cctcaagggcgtcgcccttatcagcggcggtggcgccgacagcgctgtcgccggcgccct 83 |||||||||||||||||| ||| |||||| |||| | ||||||| |||||||||||||| Sbjct: 17 cctcaagggcgtcgccctcatcggcggcgccggcggcaacagcgcggtcgccggcgccct 76 Query: 84 ccacttcntccaagacccctcctccgggtataccgaggtgagggggag 131 ||||||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 77 ccacttcttccaggacccctccaccgggtataccgaggtgagggggag 124
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 95.6 bits (48), Expect = 3e-17 Identities = 77/87 (88%) Strand = Plus / Minus Query: 24 cctcaagggcgtcgcccttatcagcggcggtggcgccgacagcgctgtcgccggcgccct 83 |||||||||||||||||| ||| |||||| |||| | ||||||| |||||||||||||| Sbjct: 6243600 cctcaagggcgtcgccctcatcggcggcgccggcggcaacagcgcggtcgccggcgccct 6243541 Query: 84 ccacttcntccaagacccctcctccgg 110 ||||||| |||| ||||||||| |||| Sbjct: 6243540 ccacttcttccaggacccctccaccgg 6243514 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 gggtataccgaggtgagggggag 131 ||||||||||||||||||||||| Sbjct: 6243387 gggtataccgaggtgagggggag 6243365
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 95.6 bits (48), Expect = 3e-17 Identities = 77/87 (88%) Strand = Plus / Minus Query: 24 cctcaagggcgtcgcccttatcagcggcggtggcgccgacagcgctgtcgccggcgccct 83 |||||||||||||||||| ||| |||||| |||| | ||||||| |||||||||||||| Sbjct: 6242813 cctcaagggcgtcgccctcatcggcggcgccggcggcaacagcgcggtcgccggcgccct 6242754 Query: 84 ccacttcntccaagacccctcctccgg 110 ||||||| |||| ||||||||| |||| Sbjct: 6242753 ccacttcttccaggacccctccaccgg 6242727 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 gggtataccgaggtgagggggag 131 ||||||||||||||||||||||| Sbjct: 6242600 gggtataccgaggtgagggggag 6242578
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 95.6 bits (48), Expect = 3e-17 Identities = 77/87 (88%) Strand = Plus / Minus Query: 24 cctcaagggcgtcgcccttatcagcggcggtggcgccgacagcgctgtcgccggcgccct 83 |||||||||||||||||| ||| |||||| |||| | ||||||| |||||||||||||| Sbjct: 82211 cctcaagggcgtcgccctcatcggcggcgccggcggcaacagcgcggtcgccggcgccct 82152 Query: 84 ccacttcntccaagacccctcctccgg 110 ||||||| |||| ||||||||| |||| Sbjct: 82151 ccacttcttccaggacccctccaccgg 82125 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 gggtataccgaggtgagggggag 131 ||||||||||||||||||||||| Sbjct: 81998 gggtataccgaggtgagggggag 81976
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 95.6 bits (48), Expect = 3e-17 Identities = 77/87 (88%) Strand = Plus / Minus Query: 24 cctcaagggcgtcgcccttatcagcggcggtggcgccgacagcgctgtcgccggcgccct 83 |||||||||||||||||| ||| |||||| |||| | ||||||| |||||||||||||| Sbjct: 56808 cctcaagggcgtcgccctcatcggcggcgccggcggcaacagcgcggtcgccggcgccct 56749 Query: 84 ccacttcntccaagacccctcctccgg 110 ||||||| |||| ||||||||| |||| Sbjct: 56748 ccacttcttccaggacccctccaccgg 56722 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 gggtataccgaggtgagggggag 131 ||||||||||||||||||||||| Sbjct: 56595 gggtataccgaggtgagggggag 56573
>gb|DQ417491.1| Chlamydomonas reinhardtii DP1 mRNA, complete cds Length = 1707 Score = 42.1 bits (21), Expect = 0.39 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 tcagcggcggtggcgccgacagcgc 68 |||||||||||||||||| |||||| Sbjct: 1645 tcagcggcggtggcgccgccagcgc 1621
>gb|AY104697.1| Zea mays PCO073524 mRNA sequence Length = 595 Score = 42.1 bits (21), Expect = 0.39 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 cacttcntccaagacccctcctccgggtataccgaggtgagggg 128 |||||| || | ||||||||| || |||| |||||||||||||| Sbjct: 114 cacttcttcgaggacccctccaccaggtacaccgaggtgagggg 157
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 agcggcggtggcgccgacag 65 |||||||||||||||||||| Sbjct: 29087 agcggcggtggcgccgacag 29106
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tggcgccgacagcgctgtcg 73 |||||||||||||||||||| Sbjct: 1437583 tggcgccgacagcgctgtcg 1437602
>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide synthesis gene cluster, partial sequence Length = 124311 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 54 tggcgccgacagcgctgtcgccg 76 |||||||||||||||| |||||| Sbjct: 99394 tggcgccgacagcgctatcgccg 99372
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 cgcccttatcagcggcggtggcg 58 |||||| |||||||||||||||| Sbjct: 6036829 cgccctcatcagcggcggtggcg 6036807
>dbj|AP006527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0603H10 Length = 137828 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 cgcccttatcagcggcggtggcg 58 |||||| |||||||||||||||| Sbjct: 34403 cgccctcatcagcggcggtggcg 34381
>dbj|AB078606.1| Phanerochaete sordida mnp3 gene for manganese peroxidase isoform 3, complete cds Length = 2979 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cagcggcggtggcgccgac 63 ||||||||||||||||||| Sbjct: 1401 cagcggcggtggcgccgac 1419 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 637,792 Number of Sequences: 3902068 Number of extensions: 637792 Number of successful extensions: 49238 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48990 Number of HSP's gapped (non-prelim): 248 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)