ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20a11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234416.1|HVU234416 Hordeum vulgare partial mRNA; clone cMWG0679.uni Length = 228 Score = 412 bits (208), Expect = e-112 Identities = 215/216 (99%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 73 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 133 Query: 122 ggcgatgatgaagaaggaggcangtgctggtgaacgcgagccgtggcccggtgatcgacg 181 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134 ggcgatgatgaagaaggaggca-gtgctggtgaacgcgagccgtggcccggtgatcgacg 192 Query: 182 aggttgcactggtggagcacctcaaggctaacccca 217 |||||||||||||||||||||||||||||||||||| Sbjct: 193 aggttgcactggtggagcacctcaaggctaacccca 228
>ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 329 bits (166), Expect = 6e-87 Identities = 319/369 (86%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 806 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 865 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 866 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 925 Query: 122 ggcgatgatgaagaaggaggcangtgctggtgaacgcgagccgtggcccggtgatcgacg 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || | Sbjct: 926 ggccatcatgaagaaggaagc-ggttcttgtgaatgcaagtcgaggaccggtgattgatg 984 Query: 182 aggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgttt 241 |||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 985 aggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgt 1044 Query: 242 ttgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtcgtgc 301 ||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| | Sbjct: 1045 ttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtcgtac 1104 Query: 302 ctcacattgcatctgcgtccaagtggacgcgtgaagggatggcaacactcgctgctctga 361 ||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 1105 ctcacatcgcatctgcctccaagtggacgcgcgaaggaatggcaacacttgctgctctaa 1164 Query: 362 acgtgcttg 370 |||| |||| Sbjct: 1165 acgttcttg 1173
>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full insert sequence Length = 1662 Score = 329 bits (166), Expect = 6e-87 Identities = 319/369 (86%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 807 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 866 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 867 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 926 Query: 122 ggcgatgatgaagaaggaggcangtgctggtgaacgcgagccgtggcccggtgatcgacg 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || | Sbjct: 927 ggccatcatgaagaaggaagc-ggttcttgtgaatgcaagtcgaggaccggtgattgatg 985 Query: 182 aggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgttt 241 |||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 986 aggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgt 1045 Query: 242 ttgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtcgtgc 301 ||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| | Sbjct: 1046 ttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtcgtac 1105 Query: 302 ctcacattgcatctgcgtccaagtggacgcgtgaagggatggcaacactcgctgctctga 361 ||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||| | Sbjct: 1106 ctcacatcgcatctgcctccaagtggacgcgcgaaggaatggcaacacttgctgctctaa 1165 Query: 362 acgtgcttg 370 |||| |||| Sbjct: 1166 acgttcttg 1174
>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full insert sequence Length = 2837 Score = 321 bits (162), Expect = 1e-84 Identities = 318/369 (86%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccgatgt 61 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| || Sbjct: 734 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccgacgt 793 Query: 62 gataagcctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggct 121 ||| || |||||||| ||| | |||||||| || ||||| ||||||||||| || |||| Sbjct: 794 gattagtctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggct 853 Query: 122 ggcgatgatgaagaaggaggcangtgctggtgaacgcgagccgtggcccggtgatcgacg 181 ||| || ||||||||||| || || || ||||| || || || || |||||||| || | Sbjct: 854 ggccatcatgaagaaggaagc-ggttcttgtgaatgcaagtcgaggaccggtgattgatg 912 Query: 182 aggttgcactggtggagcacctcaaggctaaccccatgttccgtgtcggcctcgatgttt 241 |||| ||||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 913 aggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtgt 972 Query: 242 ttgaggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtcgtgc 301 ||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| | Sbjct: 973 ttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtcgtcgtac 1032 Query: 302 ctcacattgcatctgcgtccaagtggacgcgtgaagggatggcaacactcgctgctctga 361 ||||||| |||||||| |||||||||||||| ||||| ||||||||||| | |||||| | Sbjct: 1033 ctcacatcgcatctgcctccaagtggacgcgcgaaggaatggcaacacttgttgctctaa 1092 Query: 362 acgtgcttg 370 |||| |||| Sbjct: 1093 acgttcttg 1101
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 190 bits (96), Expect = 4e-45 Identities = 141/156 (90%) Strand = Plus / Minus Query: 169 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 228 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 80881 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 80822 Query: 229 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 288 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 80821 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 80762 Query: 289 gccgtcgtcgtgcctcacattgcatctgcgtccaag 324 ||||||||||| |||||||| |||||||| |||||| Sbjct: 80761 gccgtcgtcgtacctcacatcgcatctgcctccaag 80726 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 81273 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 81217 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 323 agtggacgcgtgaagggatggcaacactcgctgctctgaacgtgcttgt 371 |||||||||| ||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 80526 agtggacgcgcgaaggaatggcaacacttgctgctctaaacgttcttgt 80478 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 81095 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 81036 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 81035 atgaagaagg 81026 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 17096205 ttcctccgtttcacaatataagac 17096182 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 10240162 tagtacttcctccgtttcacaatataag 10240135
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 190 bits (96), Expect = 4e-45 Identities = 141/156 (90%) Strand = Plus / Minus Query: 169 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 228 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 75490 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 75431 Query: 229 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 288 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 75430 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 75371 Query: 289 gccgtcgtcgtgcctcacattgcatctgcgtccaag 324 ||||||||||| |||||||| |||||||| |||||| Sbjct: 75370 gccgtcgtcgtacctcacatcgcatctgcctccaag 75335 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 75882 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 75826 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 323 agtggacgcgtgaagggatggcaacactcgctgctctgaacgtgcttgt 371 |||||||||| ||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 75135 agtggacgcgcgaaggaatggcaacacttgctgctctaaacgttcttgt 75087 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 75704 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 75645 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 75644 atgaagaagg 75635
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 190 bits (96), Expect = 4e-45 Identities = 141/156 (90%) Strand = Plus / Minus Query: 169 ccggtgatcgacgaggttgcactggtggagcacctcaaggctaaccccatgttccgtgtc 228 |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 29908 ccggtgattgatgaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtc 29849 Query: 229 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 288 || || ||||| |||||||||||||||||||||||||| || || ||||| ||||||||| Sbjct: 29848 ggtcttgatgtgtttgaggatgagccttacatgaagcccggcctcgctgacatgaagaat 29789 Query: 289 gccgtcgtcgtgcctcacattgcatctgcgtccaag 324 ||||||||||| |||||||| |||||||| |||||| Sbjct: 29788 gccgtcgtcgtacctcacatcgcatctgcctccaag 29753 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 2 gcagcccgtgacatggaagagggcttccagcatggaggaggtcctcagggaggccga 58 |||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||| Sbjct: 30300 gcagcctgtgacatggaagagagccgccaccatggaggatgtcctcagggaggccga 30244 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 323 agtggacgcgtgaagggatggcaacactcgctgctctgaacgtgcttgt 371 |||||||||| ||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 29553 agtggacgcgcgaaggaatggcaacacttgctgctctaaacgttcttgt 29505 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 69 ctgcacccggtgcttgacaagacgacgtaccacctgataaacccagagcggctggcgatg 128 |||||||| ||| | |||||||| || ||||| ||||||||||| || ||||||| || Sbjct: 30122 ctgcaccctgtgttggacaagaccacttaccatctgataaacccggaaaggctggccatc 30063 Query: 129 atgaagaagg 138 |||||||||| Sbjct: 30062 atgaagaagg 30053
>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete cds Length = 1576 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 217 atgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctggct 276 |||||||| || ||||| ||||| || ||||| || |||||||||||||||||||| || Sbjct: 905 atgttccgggttggccttgatgtcttcgaggacgaaccttacatgaagccagggcttgcc 964 Query: 277 gagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacgcgtgaa 336 || |||||||||||| | |||||||| |||||||| ||||| || |||||||| || ||| Sbjct: 965 gacatgaagaatgccattgtcgtgccccacattgcttctgcttcaaagtggactcgcgaa 1024 Query: 337 gggatggcaacactcgctgctctgaa 362 || ||||| || || ||||||||||| Sbjct: 1025 ggaatggcgactctagctgctctgaa 1050
>gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1414 Score = 109 bits (55), Expect = 1e-20 Identities = 133/159 (83%) Strand = Plus / Plus Query: 210 taaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagg 269 |||||| ||||| || || ||||| ||||| |||||||| ||||| |||||||| || || Sbjct: 906 taacccaatgtttcgagtaggccttgatgtgtttgaggaagagccctacatgaaacctgg 965 Query: 270 gctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggac 329 ||| || ||| ||||||||||| | || || || |||||||||||||| ||||||||||| Sbjct: 966 gcttgcagagttgaagaatgccattgtggtaccccacattgcatctgcctccaagtggac 1025 Query: 330 gcgtgaagggatggcaacactcgctgctctgaacgtgct 368 ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1026 tcgtgagggaatggctacactagcagctctaaacgtgct 1064
>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC 1.1.1.29) Length = 1437 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 214 cccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctg 273 |||||||| || || ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 908 cccatgtttcgagttggccttgatgtttttgaggatgaaccatacatgaaacctggactt 967 Query: 274 gctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacgcgt 333 ||||| |||||||| || || | || ||||||||||| ||||| ||||||||||| || Sbjct: 968 gctgatatgaagaacgcgatcattgttcctcacattgcttctgcttccaagtggactcgc 1027 Query: 334 gaagggatggcaacactcgctgctct 359 ||||| ||||||||||| |||||||| Sbjct: 1028 gaaggaatggcaacactggctgctct 1053
>gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1492 Score = 99.6 bits (50), Expect = 1e-17 Identities = 131/158 (82%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| ||||| || || ||||| || || |||||||| ||||| |||||||| || ||| Sbjct: 909 aacccgatgtttcgagtaggccttgacgtgtttgaggaagagccctacatgaaacccggg 968 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || || ||| ||||||||||| | || || || |||||||||||||| ||||||||||| Sbjct: 969 cttgcagagttgaagaatgccattgtggtaccccacattgcatctgcctccaagtggact 1028 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgtgct 368 ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1029 cgtgagggaatggctacactagcagctctaaacgtgct 1066
>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1362 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 229 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 288 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 289 gccgtcgtcgtgcctcacattgcatctgcgtccaagtggacgcgtgaagggatggc 344 || || | || ||||||||||| || || ||||||||||| |||||||| ||||| Sbjct: 973 gcgatcattgtacctcacattgcttccgcttccaagtggactcgtgaaggaatggc 1028
>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1269 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 229 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaagaat 288 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 289 gccgtcgtcgtgcctcacattgcatctgcgtccaagtggacgcgtgaagggatggc 344 || || | || ||||||||||| || || ||||||||||| |||||||| ||||| Sbjct: 973 gcgatcattgtacctcacattgcttccgcttccaagtggactcgtgaaggaatggc 1028
>dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate reductase, complete cds Length = 1428 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 945 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 1004 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| ||||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 1005 cttgctgatatgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 1064 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 1065 cgtgaaggaatggctacgcttgcagctctcaacgt 1099 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 767 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 823
>ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT1G68010 (HPR) mRNA, complete cds Length = 1494 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 930 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 989 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 990 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 1049 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 1050 cgtgaaggaatggctacgcttgcagctctcaacgt 1084 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 752 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 808
>gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate reductase (At1g68010) mRNA, complete cds Length = 1192 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 865 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 924 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 925 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 984 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 985 cgtgaaggaatggctacgcttgcagctctcaacgt 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 687 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 743
>gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate reductase HPR (At1g68010) mRNA, complete cds Length = 1417 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 930 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 989 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 990 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 1049 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 1050 cgtgaaggaatggctacgcttgcagctctcaacgt 1084 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 752 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 808
>gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1376 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 922 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 981 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 982 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 1041 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 1042 cgtgaaggaatggctacgcttgcagctctcaacgt 1076 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 744 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 800
>gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1194 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 865 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 924 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 925 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 984 Query: 331 cgtgaagggatggcaacactcgctgctctgaacgt 365 |||||||| ||||| || || || ||||| ||||| Sbjct: 985 cgtgaaggaatggctacgcttgcagctctcaacgt 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 687 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 743
>emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 211 aaccccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccaggg 270 ||||| |||||||| || || |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 895 aacccgatgttccgagttggtctcgatgtgttcgaggaagagccattcatgaaaccaggg 954 Query: 271 ctggctgagatgaagaatgccgtcgtcgtgcctcacattgcatctgcgtccaagtggacg 330 || ||||| | ||| || || | || || ||||||||||| ||||| ||||||||||| Sbjct: 955 cttgctgatacgaaaaacgctattgttgttcctcacattgcttctgcttccaagtggact 1014 Query: 331 cgtgaagggatgg 343 |||||||| |||| Sbjct: 1015 cgtgaaggaatgg 1027 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 32 catggaggaggtcctcagggaggccgatgtgataagcctgcacccggtgcttgacaa 88 |||||||||||| || | ||||| ||| ||||||| || ||||||||||| ||||| Sbjct: 717 catggaggaggtgctgcgtgaggctgatctgataagtcttcacccggtgctggacaa 773
>gb|AY286093.1| Triticum aestivum chalcone synthase (CHS) gene, complete cds Length = 1394 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 449 cgtctcacaatataagacgtttttgcaagcta 480 |||||||||||||||||||||||||||||||| Sbjct: 331 cgtctcacaatataagacgtttttgcaagcta 300 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 451 tctcacaatataagacgtttttgcaagcta 480 ||||| |||||||||||||||||||||||| Sbjct: 364 tctcataatataagacgtttttgcaagcta 335
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttttgca 475 ||||||||| |||||||||||||| |||||||| Sbjct: 118494 ttcctccgtttcacaatataagacctttttgca 118462
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttttgca 475 ||||||||| |||||||||||||| |||||||| Sbjct: 59426 ttcctccgtttcacaatataagacctttttgca 59394
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttttgca 475 ||||||||| |||||||||||||| |||||||| Sbjct: 24930380 ttcctccgtttcacaatataagacctttttgca 24930348 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 24425822 ttcctccgtttcacaatataagacttttt 24425850 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 25094657 ttcctccgtttcacaatataagac 25094680 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataaga 465 |||| ||||||||||||| ||||||||| Sbjct: 21723227 agtacttcctccgtctcataatataaga 21723200 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 19198118 ttcctccgtttcacaatataagac 19198095
>gb|AY196347.1| Hordeum vulgare subsp. vulgare MLA12 (Mla12) gene, complete cds Length = 6604 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataagacgtttttgcaag 477 |||||||| |||||||||||| ||||||||||| Sbjct: 5555 cctccgtcccacaatataagatgtttttgcaag 5523
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttttgca 475 ||||||||| |||||||||||||| |||||||| Sbjct: 25241968 ttcctccgtttcacaatataagacctttttgca 25241936 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 24737491 ttcctccgtttcacaatataagacttttt 24737519 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 25405676 ttcctccgtttcacaatataagac 25405699 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataaga 465 |||| ||||||||||||| ||||||||| Sbjct: 22033426 agtacttcctccgtctcataatataaga 22033399 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 19357667 ttcctccgtttcacaatataagac 19357644
>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12, complete sequence Length = 135323 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataagacgtttt 471 ||||||||||||||||||||| ||||| Sbjct: 113466 cctccgtctcacaatataagatgtttt 113440
>gb|AY266443.1| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE element Lauren, partial sequence; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 18901 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataagacgtttttgcaagct 479 |||||||| |||||| ||||| ||||||||||||| Sbjct: 17951 cctccgtcccacaatttaagatgtttttgcaagct 17917
>gb|AY266442.1| Hordeum vulgare LINE element Lauren, partial sequence; MLA6-2 (Mla6-2) gene, complete cds, alternatively spliced; Copia/Ty1-like retrotransposon HORPIA-4 and Copia/Ty1-like retrotransposon HORPIA-5, complete sequence Length = 17053 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataagacgtttttgcaagct 479 |||||||| |||||| ||||| ||||||||||||| Sbjct: 16687 cctccgtcccacaatttaagatgtttttgcaagct 16653
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataagacgtttt 471 ||||| ||||||||| |||||||||||||| |||| Sbjct: 84927 tagtacttcctccgtttcacaatataagacttttt 84961
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 453 tcacaatataagacgtttttgcaagct 479 |||||||||||||||||||| |||||| Sbjct: 82773 tcacaatataagacgtttttacaagct 82747
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataagacgtttt 471 ||||| ||||||||| |||||||||||||| |||| Sbjct: 19431363 tagtacttcctccgtttcacaatataagacttttt 19431397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 7492566 tccagcatggaggaggtcct 7492585
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 440 tagttcctccgtctcacaatataagac 466 |||||||||||| |||||||||||||| Sbjct: 4120167 tagttcctccgtttcacaatataagac 4120141 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 434 aagtagtagttcctccgtctcacaatataagacgttt 470 |||||||| | ||||||| |||||||||||| ||||| Sbjct: 22103234 aagtagtactccctccgtttcacaatataagccgttt 22103270 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 19961066 tagtacttcctccgtttcacaatataag 19961093 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 13378415 cctccgtctcacaatataag 13378396
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataagacgtttt 471 ||||||||||||||||||||| ||||| Sbjct: 11543972 cctccgtctcacaatataagatgtttt 11543946 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 28439799 ttcctccgtttcacaatataagac 28439822 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 26930378 cctccgtctcacaatataag 26930397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 16830316 cctccgtctcacaatataag 16830335 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 2760450 cctccgtctcacaatataag 2760469
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 440 tagttcctccgtctcacaatataagac 466 |||||||||||| |||||||||||||| Sbjct: 103648 tagttcctccgtttcacaatataagac 103622
>gb|AY842251.1| Chlamydomonas reinhardtii hydroxypyruvate reductase mRNA, partial cds Length = 931 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 175 atcgacgaggttgcactggtggagcacctcaaggctaacccc 216 |||||||||| || ||||||| |||||||||||| |||||| Sbjct: 694 atcgacgaggcggcgctggtggcgcacctcaaggccaacccc 735
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 agtagttcctccgtctcacaatataagacgtttt 471 |||||||||||| ||||| ||||||||| ||||| Sbjct: 117045 agtagttcctccatctcagaatataagaagtttt 117078
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 435 agtagtagttcctccgtctcacaatataag 464 ||||||| ||||||||| |||||||||||| Sbjct: 13062838 agtagtacttcctccgtttcacaatataag 13062867 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 2585879 ttcctccgtttcacaatataagacttttt 2585907 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 34919199 ttcctccgtttcacaatataagac 34919176 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 30994945 cctccgtctcacaatataag 30994926 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ctccgtctcacaatataaga 465 |||||||||||||||||||| Sbjct: 28568038 ctccgtctcacaatataaga 28568057 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 14545720 ttcctccgtttcacaatataagac 14545697 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 4622982 cctccgtctcacaatataag 4623001 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 2360494 ttcctccgtttcacaatataagac 2360517
>gb|AC109442.3| Homo sapiens chromosome 5 clone CTC-345B2, complete sequence Length = 71075 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 48212 agcatggaggaggtcctcaggg 48233
>gb|AC106752.3| Homo sapiens chromosome 5 clone RP11-166J22, complete sequence Length = 95926 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 5141 agcatggaggaggtcctcaggg 5162
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 agtagttcctccgtctcacaatataagacgtttt 471 |||||||||||| ||||| ||||||||| ||||| Sbjct: 4002277 agtagttcctccatctcagaatataagaagtttt 4002310 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 22414512 ttcctccgtttcacaatataagac 22414535 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 5958111 ttcctccgtttcacaatataagac 5958134 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 2533880 ttcctccgtttcacaatataagac 2533857
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataagac 466 ||||| ||||||||||||| |||||||||| Sbjct: 27769855 tagtacttcctccgtctcataatataagac 27769826 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 13159212 ttcctccgtttcacaatataagacttttt 13159240 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 2356320 ttcctccgtttcacaatataagacttttt 2356348 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 26710280 tagtacttcctccgtttcacaatataag 26710307 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 15915328 ttcctccgtttcacaatataagac 15915305 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 4913917 ttcctccgtttcacaatataagac 4913940
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 435 agtagtagttcctccgtctcacaatataag 464 ||||||| ||||||||| |||||||||||| Sbjct: 13059613 agtagtacttcctccgtttcacaatataag 13059642 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 2585989 ttcctccgtttcacaatataagacttttt 2586017 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 35009271 ttcctccgtttcacaatataagac 35009248 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 31085468 cctccgtctcacaatataag 31085449 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ctccgtctcacaatataaga 465 |||||||||||||||||||| Sbjct: 28659362 ctccgtctcacaatataaga 28659381 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 14540695 ttcctccgtttcacaatataagac 14540672 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 4623097 cctccgtctcacaatataag 4623116 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 2360604 ttcctccgtttcacaatataagac 2360627
>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence Length = 149172 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 agcatggaggaggtcctcaggg 51 |||||||||||||||||||||| Sbjct: 107563 agcatggaggaggtcctcaggg 107584
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 435 agtagtagttcctccgtctcacaatataag 464 ||||||| ||||||||| |||||||||||| Sbjct: 140536 agtagtacttcctccgtttcacaatataag 140565
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataagac 466 ||||| ||||||||||||| |||||||||| Sbjct: 62234 tagtacttcctccgtctcataatataagac 62205
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataagac 466 ||||| ||||||||||||| |||||||||| Sbjct: 148957 tagtacttcctccgtctcataatataagac 148928
>dbj|AK120281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049I08, full insert sequence Length = 4359 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 435 agtagtagttcctccgtctcacaatataag 464 ||||||| ||||||||| |||||||||||| Sbjct: 3535 agtagtacttcctccgtttcacaatataag 3506
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 agtagttcctccgtctcacaatataagacgtttt 471 |||||||||||| ||||| ||||||||| ||||| Sbjct: 4002198 agtagttcctccatctcagaatataagaagtttt 4002231 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 22426580 ttcctccgtttcacaatataagac 22426603 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 5959297 ttcctccgtttcacaatataagac 5959320 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 2533831 ttcctccgtttcacaatataagac 2533808
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 438 agtagttcctccgtctcacaatataagacgtttt 471 |||||||||||| ||||| ||||||||| ||||| Sbjct: 56177 agtagttcctccatctcagaatataagaagtttt 56210
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataagacgtttttg 473 ||||| ||||| ||||||||||||||||| Sbjct: 2141 cctccatctcaaaatataagacgtttttg 2169
>gb|AC104846.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0004C07, complete sequence Length = 135425 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 26913 ttcctccgtttcacaatataagacttttt 26941
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 tcgatgtttttgaggatgagcctta 257 |||||||||||||||| |||||||| Sbjct: 1676855 tcgatgtttttgaggaagagcctta 1676879
>emb|X58542.1|CSHPRAG C.sativus hpr-A gene for NADH-dependent hydroxypyruvate reductase Length = 6740 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 323 agtggacgcgtgaagggatggcaacactcgctgctct 359 ||||||| || ||||| ||||||||||| |||||||| Sbjct: 4538 agtggactcgcgaaggaatggcaacactggctgctct 4574 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 245 aggatgagccttacatgaagccagggctggctgagatgaagaatgccgtcgtcgtgcctc 304 ||||||| || |||||||| || || || ||||| |||||||| || || | || |||| Sbjct: 4381 aggatgaaccatacatgaaacctggacttgctgatatgaagaacgcgatcattgttcctc 4440 Query: 305 acattgcatctgcgtccaag 324 ||||||| ||||| |||||| Sbjct: 4441 acattgcttctgcttccaag 4460
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 84215 ttcctccgtttcacaatataagacttttt 84187
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 10566223 ttcctccgtttcacaatataagacttttt 10566195 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 17762308 ttcctccgtttcacaatataagac 17762285 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 6361234 ttcctccgtttcacaatataagac 6361211
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataagac 466 |||| ||||||||| |||||||||||||| Sbjct: 20369048 agtacttcctccgtttcacaatataagac 20369020 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataagacgt 468 |||||||| ||||||||||||||| Sbjct: 32608290 cctccgtcccacaatataagacgt 32608313 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 28286103 ttcctccgtttcacaatataagac 28286126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 28149156 cctccgtctcacaatataag 28149175 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 26566256 ttcctccgtttcacaatataagac 26566233
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataagac 466 |||| ||||||||| |||||||||||||| Sbjct: 25163 agtacttcctccgtttcacaatataagac 25135
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataagac 466 |||| ||||||||| |||||||||||||| Sbjct: 135081 agtacttcctccgtttcacaatataagac 135053
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ggaggtcctcagggaggccga 58 ||||||||||||||||||||| Sbjct: 318954 ggaggtcctcagggaggccga 318974
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 77539 ttcctccgtttcacaatataagacttttt 77567
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 434 aagtagtagttcctccgtctcacaatataagacgttt 470 |||||||| | ||||||| |||||||||||| ||||| Sbjct: 24727 aagtagtactccctccgtttcacaatataagccgttt 24763
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 142837 ttcctccgtttcacaatataagacttttt 142809
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 102930 ttcctccgtttcacaatataagacttttt 102902
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 434 aagtagtagttcctccgtctcacaatataagacgttt 470 |||||||| | ||||||| |||||||||||| ||||| Sbjct: 145298 aagtagtactccctccgtttcacaatataagccgttt 145334
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagacgtttt 471 ||||||||| |||||||||||||| |||| Sbjct: 59328 ttcctccgtttcacaatataagacttttt 59356
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agcatggaggaggtcctcag 49 |||||||||||||||||||| Sbjct: 15559 agcatggaggaggtcctcag 15540
>gb|AC159409.1| Trypanosoma brucei chromosome 7 clone RPCI93-15M23, complete sequence Length = 157301 Score = 40.1 bits (20), Expect = 8.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 agaaggaggcangtgctggtgaa 155 ||||||||||| ||||||||||| Sbjct: 45944 agaaggaggcaggtgctggtgaa 45922
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 42812 cctccgtctcacaatataag 42831
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 38776 cctccgtctcacaatataag 38795
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 8.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 agaaggaggcangtgctggtgaa 155 ||||||||||| ||||||||||| Sbjct: 1803959 agaaggaggcaggtgctggtgaa 1803937
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 66906 ttcctccgtttcacaatataagac 66883
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 cctcaaggctaaccccatgttccg 224 ||||||||||| |||||||||||| Sbjct: 37215 cctcaaggctagccccatgttccg 37192
>gb|AC168276.3| Mus musculus BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 cctcaaggctaaccccatgttccg 224 ||||||||||| |||||||||||| Sbjct: 151118 cctcaaggctagccccatgttccg 151095
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 33121 ttcctccgtttcacaatataagac 33144
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 74723 ttcctccgtttcacaatataagac 74746
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 82810 cctccgtctcacaatataag 82829
>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence Length = 232770 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tgatctgaacctgaggagtaagtg 539 |||||||| ||||||||||||||| Sbjct: 35263 tgatctgatcctgaggagtaagtg 35240
>ref|XM_818577.1| Trypanosoma brucei TREU927 clone RPCI93-15M23 hypothetical protein (Tb927.7.6600) partial mRNA Length = 807 Score = 40.1 bits (20), Expect = 8.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 133 agaaggaggcangtgctggtgaa 155 ||||||||||| ||||||||||| Sbjct: 557 agaaggaggcaggtgctggtgaa 579
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tgatctgaacctgaggagtaagtg 539 |||||||| ||||||||||||||| Sbjct: 178042 tgatctgatcctgaggagtaagtg 178019
>gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complete sequence Length = 168515 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccagcatggaggaggtcctcaggg 51 |||| ||||||||||||||||||| Sbjct: 48844 ccaggatggaggaggtcctcaggg 48821
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 438 agtagttcctccgtctcacaatataaga 465 |||| ||||||||||||| ||||||||| Sbjct: 75280 agtacttcctccgtctcataatataaga 75253
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 101119 cctccgtctcacaatataag 101138
>emb|CR653454.2|CNS0F36C Tetraodon nigroviridis full-length cDNA Length = 723 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gctggcgatgatgaagaaggaggc 142 ||||||| |||||||||||||||| Sbjct: 419 gctggcggtgatgaagaaggaggc 442
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone OSJNBb0026K11, complete sequence Length = 129643 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 1345 ttcctccgtttcacaatataagac 1368
>gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 map 4, complete sequence Length = 244349 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aaacccagagcggctggcgatgat 130 ||||||| |||||||||||||||| Sbjct: 211050 aaacccacagcggctggcgatgat 211073
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 111991 ttcctccgtttcacaatataagac 112014
>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11, complete sequence Length = 149085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 138919 tccagcatggaggaggtcct 138938
>emb|BX088577.3| Mouse DNA sequence from clone RP23-58H16 on chromosome 4, complete sequence Length = 228379 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 aaacccagagcggctggcgatgat 130 ||||||| |||||||||||||||| Sbjct: 96858 aaacccacagcggctggcgatgat 96835
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 108202 ttcctccgtttcacaatataagac 108179
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 99079 ttcctccgtttcacaatataagac 99056
>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence Length = 185904 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 36760 ttcctccgtttcacaatataagac 36737
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 66535 ttcctccgtttcacaatataagac 66558
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggcctcgatgtttttgaggatgagcctt 256 ||||||||||||| |||||||| ||||| Sbjct: 647519 ggcctcgatgtttgtgaggatgggcctt 647546
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 107140 cctccgtctcacaatataag 107121
>tpg|BK000366.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M86 transposase gene, complete cds Length = 24489 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 22423 ttcctccgtttcacaatataagac 22400
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 10426831 ttcctccgtttcacaatataagac 10426854
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 77336 ttcctccgtttcacaatataagac 77359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 21840442 ttcctccgtttcacaatataagac 21840419
>gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, complete sequence Length = 169286 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ttttgcaagctatgtttattacta 492 ||||| |||||||||||||||||| Sbjct: 144588 ttttggaagctatgtttattacta 144611
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 96281 ttcctccgtttcacaatataagac 96304
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctccgtctcacaatataaga 465 |||||||||||||||||||| Sbjct: 130858 ctccgtctcacaatataaga 130839
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataagacgt 468 |||||||| ||||||||||||||| Sbjct: 71085 cctccgtcccacaatataagacgt 71108
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 120610 ttcctccgtttcacaatataagac 120633
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 33150 cctccgtctcacaatataag 33169
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 1203 ttcctccgtttcacaatataagac 1226
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 39970 ttcctccgtttcacaatataagac 39947
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 17705 tagtacttcctccgtttcacaatataag 17732
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 32730 ttcctccgtttcacaatataagac 32707
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 28178 ttcctccgtttcacaatataagac 28155
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 77578 ttcctccgtttcacaatataagac 77555
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 35214 tagtacttcctccgtttcacaatataag 35241
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 57137 tagtacttcctccgtttcacaatataag 57164
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 154842 ttcctccgtttcacaatataagac 154819
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 99401 ttcctccgtttcacaatataagac 99424
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 112528 tagtacttcctccgtttcacaatataag 112501
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 5972 tagtacttcctccgtttcacaatataag 5945
>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025E03 Length = 156806 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 49759 cctccgtctcacaatataag 49740
>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3 Length = 42356 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 ttgtgagtttccttggatcgatga 391 ||||||||| |||||||||||||| Sbjct: 20019 ttgtgagttaccttggatcgatga 20042
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 120025 ttcctccgtttcacaatataagac 120002
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 41111 ttcctccgtttcacaatataagac 41088
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 437 tagtagttcctccgtctcacaatataag 464 ||||| ||||||||| |||||||||||| Sbjct: 127884 tagtacttcctccgtttcacaatataag 127911
>ref|NM_208920.1| Eremothecium gossypii ACR165Wp (ACR165W), mRNA Length = 3420 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggcctcgatgtttttgaggatgagcctt 256 ||||||||||||| |||||||| ||||| Sbjct: 3291 ggcctcgatgtttgtgaggatgggcctt 3318
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 147 gctggtgaacgcgagccgtggcccggtg 174 |||||| ||||| ||||||||||||||| Sbjct: 2415924 gctggtaaacgccagccgtggcccggtg 2415951
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 10426713 ttcctccgtttcacaatataagac 10426736
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 ttcctccgtctcacaatataagac 466 ||||||||| |||||||||||||| Sbjct: 79332 ttcctccgtttcacaatataagac 79355
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccagcatggaggaggtcct 46 |||||||||||||||||||| Sbjct: 15039 tccagcatggaggaggtcct 15058
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cttgacaagacgacgtacca 100 |||||||||||||||||||| Sbjct: 1934180 cttgacaagacgacgtacca 1934161
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cctccgtctcacaatataag 464 |||||||||||||||||||| Sbjct: 63937 cctccgtctcacaatataag 63956 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,327,993 Number of Sequences: 3902068 Number of extensions: 4327993 Number of successful extensions: 78864 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76950 Number of HSP's gapped (non-prelim): 1910 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
