| Clone Name | baal19o19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 375 bits (189), Expect = e-101 Identities = 305/341 (89%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 2 atcttccccgccgatgcc-tcgcaagggcca-gcactacctctccctcgcacccggcggc 59 |||||||||||||| ||| |||| |||||| |||||||||| || | |||||||| || Sbjct: 347 atcttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtgga 406 Query: 60 ttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttc 119 ||||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 407 ctaggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttc 466 Query: 120 attcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcc 179 || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 467 atcgagaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgcc 526 Query: 180 agcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttg 239 ||||||||||||||||||||||| || ||||||||||||| ||||| || |||||| || Sbjct: 527 agcaaaggtgtgatgcaaatgctgaataccattatcagaaatgagagagatgggattctg 586 Query: 240 gtccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctctt 299 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gttcctgttccacaatacccgctttattctgctgccatttccctctttggtggttctctc 646 Query: 300 gtcccatattatttggaagaagaggctaattggggacttga 340 || ||||| || || |||||||||||||| ||||||||||| Sbjct: 647 gtgccatactacttagaagaagaggctaactggggacttga 687 Score = 127 bits (64), Expect = 3e-26 Identities = 73/76 (96%) Strand = Plus / Plus Query: 375 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 434 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 722 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 781 Query: 435 caatgcctaagtgaag 450 |||||||| ||||||| Sbjct: 782 caatgccttagtgaag 797
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 367 bits (185), Expect = 2e-98 Identities = 304/341 (89%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 2 atcttccccgccgatgcc-tcgcaagggcca-gcactacctctccctcgcacccggcggc 59 |||||||||||||| ||| |||| |||||| |||||||||| || | |||||||| || Sbjct: 298 atcttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtgga 357 Query: 60 ttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttc 119 ||||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 358 ctaggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttc 417 Query: 120 attcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcc 179 || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 418 atcgagaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgcc 477 Query: 180 agcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttg 239 ||||||||||||||||||||||| || ||||||||||||| ||||| || |||||| || Sbjct: 478 agcaaaggtgtgatgcaaatgctgaataccattatcagaaatgagagagatgggattctg 537 Query: 240 gtccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctctt 299 || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 538 gttcctgttccacaatacccgctttattctgctgccatttccccctttggtggttctctc 597 Query: 300 gtcccatattatttggaagaagaggctaattggggacttga 340 || ||||| || || |||||||||||||| ||||||||||| Sbjct: 598 gtgccatactacttagaagaagaggctaactggggacttga 638 Score = 127 bits (64), Expect = 3e-26 Identities = 73/76 (96%) Strand = Plus / Plus Query: 375 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 434 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 673 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 732 Query: 435 caatgcctaagtgaag 450 |||||||| ||||||| Sbjct: 733 caatgccttagtgaag 748
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 367 bits (185), Expect = 2e-98 Identities = 304/341 (89%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 2 atcttccccgccgatgcc-tcgcaagggcca-gcactacctctccctcgcacccggcggc 59 |||||||||||||| ||| |||| |||||| |||||||||| || | |||||||| || Sbjct: 116 atcttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtgga 175 Query: 60 ttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttc 119 ||||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 176 ctaggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttc 235 Query: 120 attcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcc 179 || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 236 atcgagaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgcc 295 Query: 180 agcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttg 239 ||||||||||||||||||||||| || |||||||||||| ||||| || |||||| || Sbjct: 296 agcaaaggtgtgatgcaaatgctgaataccattatcagaagtgagagagatgggattctg 355 Query: 240 gtccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctctt 299 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gttcctgttccacaatacccgctttattctgctgccatttccctctttggtggttctctc 415 Query: 300 gtcccatattatttggaagaagaggctaattggggacttga 340 || ||||| || || |||||||||||||| ||||||||||| Sbjct: 416 gtgccatactacttagaagaagaggctaactggggacttga 456 Score = 127 bits (64), Expect = 3e-26 Identities = 73/76 (96%) Strand = Plus / Plus Query: 375 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 434 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 491 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 550 Query: 435 caatgcctaagtgaag 450 |||||||| ||||||| Sbjct: 551 caatgccttagtgaag 566
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 281 bits (142), Expect = 1e-72 Identities = 326/386 (84%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 67 cgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcaga 126 |||||||||||||||| || ||||| || ||||||||||||||||||| ||||| || | Sbjct: 1302 cgtacagtgactcccgcgg-atcccgggaatcaggaaggaagttgccgacttcatccaca 1244 Query: 127 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 186 ||||||||| ||||| |||||||| || || || ||||||||||| ||||||||||||| Sbjct: 1243 agcgtgatggatatcccagtgatccggaactcatctacctcacagacggtgccagcaaag 1184 Query: 187 gtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccctg 246 |||||||||| || || ||| |||| || |||||||||| ||||||||| |||||||||| Sbjct: 1183 gtgtgatgcagatcctgaacaccatcattagaaacgagatggacgggatcttggtccctg 1124 Query: 247 ttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtcccat 306 |||| || ||||| |||||||| || |||||||||||| |||||||||||| ||||| | Sbjct: 1123 ttcctcagtacccactttattccgccaccatttccctctatggtggttctctggtcccgt 1064 Query: 307 attatttggaagaagaggctaattggggacttgatcttgtcagtacccgccaatcagttg 366 | || ||||||||||||||||| ||| | || || ||| | || ||| ||| |||| | Sbjct: 1063 actacttggaagaagaggctaactggagcctcgactttgcaaatatccgacaagcagtgg 1004 Query: 367 cagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaacc 426 | || ||||| || ||||||||| |||||||||| |||||||| ||||| |||||||| | Sbjct: 1003 ccgaggcacgttcgaagggaatctctgttcgagcgatggtgatgataaatccaggaaatc 944 Query: 427 ctactggccaatgcctaagtgaagca 452 | |||||||| ||||| ||||||||| Sbjct: 943 ccactggccagtgccttagtgaagca 918
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 165 bits (83), Expect = 2e-37 Identities = 215/259 (83%) Strand = Plus / Plus Query: 61 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 120 ||||||| || |||||||| |||||| | ||||| | ||||||||||| || ||||||| Sbjct: 299 taggtgcttatagtgactctcgaggtcttcctggaataaggaaggaagtggcagagttca 358 Query: 121 ttcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcca 180 || |||||||||||||||||| |||||||||||||| || | ||||| |||||||||| Sbjct: 359 ttgggaggcgtgatgggtatccaagtgatccagagctcatatttctcacggatggtgcca 418 Query: 181 gcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttgg 240 ||||||| || ||||| || | || | |||||| | || ||||| |||||||||| Sbjct: 419 gcaaaggagtaatgcagattttgaatacaattatccgtggtgaaagggatgggattttgg 478 Query: 241 tccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttg 300 | ||||| |||||||| |||||||| || ||||| || || ||||||||||||||||||| Sbjct: 479 ttcctgtcccacaatatccgctttactcagctgcaatatctctctttggtggttctcttg 538 Query: 301 tcccatattatttggaaga 319 | ||||||||| ||||||| Sbjct: 539 ttccatattatctggaaga 557 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 360 tcagttgcagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaaccca 419 |||||||||| ||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 598 tcagttgcagcagctcgctccaaaggaataactgtccgagcaatggtgattataaaccct 657 Query: 420 ggaaaccctactggccaatgcctaagtgaagc 451 ||||| |||||||| || || || |||||||| Sbjct: 658 ggaaatcctactggtcagtgtcttagtgaagc 689
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 157 bits (79), Expect = 4e-35 Identities = 214/259 (82%) Strand = Plus / Plus Query: 61 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 120 ||||||| || |||||||| |||||| | ||||| | ||||||||||| || ||||||| Sbjct: 299 taggtgcttatagtgactctcgaggtcttcctggaataaggaaggaagtggcagagttca 358 Query: 121 ttcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcca 180 || |||||||||||||||||| |||||||||||||| || | ||||| |||||||||| Sbjct: 359 ttgggaggcgtgatgggtatccaagtgatccagagctcatatttctcacggatggtgcca 418 Query: 181 gcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttgg 240 ||||||| || ||||| || | || | |||||| | || ||||| |||||||||| Sbjct: 419 gcaaaggagtaatgcagattttgaatacaattatccgtggtgaaagggatgggattttgg 478 Query: 241 tccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttg 300 | ||||| |||||||| |||||||| || ||||| || || |||| |||||||||||||| Sbjct: 479 ttcctgtcccacaatatccgctttactcagctgcaatatctctctatggtggttctcttg 538 Query: 301 tcccatattatttggaaga 319 | ||||||||| ||||||| Sbjct: 539 ttccatattatctggaaga 557 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 360 tcagttgcagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaaccca 419 |||||||||| ||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 598 tcagttgcagcagctcgctccaaaggaataactgtccgagcaatggtgattataaaccct 657 Query: 420 ggaaaccctactggccaatgcctaagtgaagc 451 ||||| |||||||| || || || |||||||| Sbjct: 658 ggaaatcctactggtcagtgtcttagtgaagc 689
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 292 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449184 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 449125 Query: 293 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 340 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 449124 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 449077 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 144 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 203 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449386 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 449327 Query: 204 aacgccattatcagaaacgagag 226 || ||||||||||||| ||||| Sbjct: 449326 aataccattatcagaaatgagag 449304 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 393 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 450 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 448298 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaag 448241 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 62 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 121 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 449575 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 449516 Query: 122 tcagaggcgtgatgggtatcc 142 ||||||||||||| ||||| Sbjct: 449515 cgagaggcgtgatggttatcc 449495 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggtcaaagggaatcactgt 394 |||||||||||||||||||| Sbjct: 449042 cggtcaaagggaatcactgt 449023
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 292 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51348 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 51289 Query: 293 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 340 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 51288 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 51241 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 144 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 203 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51550 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 51491 Query: 204 aacgccattatcagaaacgagag 226 || ||||||||||||| ||||| Sbjct: 51490 aataccattatcagaaatgagag 51468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 393 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 450 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 50462 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaag 50405 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 62 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 121 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 51739 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 51680 Query: 122 tcagaggcgtgatgggtatcc 142 ||||||||||||| ||||| Sbjct: 51679 cgagaggcgtgatggttatcc 51659 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggtcaaagggaatcactgt 394 |||||||||||||||||||| Sbjct: 51206 cggtcaaagggaatcactgt 51187
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 292 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3096 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 3037 Query: 293 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 340 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 3036 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 2989 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 144 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 203 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3298 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 3239 Query: 204 aacgccattatcagaaacgagag 226 || ||||||||||||| ||||| Sbjct: 3238 aataccattatcagaaatgagag 3216 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 393 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 450 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 2210 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaag 2153 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 62 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 121 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 3487 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 3428 Query: 122 tcagaggcgtgatgggtatcc 142 ||||||||||||| ||||| Sbjct: 3427 cgagaggcgtgatggttatcc 3407 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cggtcaaagggaatcactgt 394 |||||||||||||||||||| Sbjct: 2954 cggtcaaagggaatcactgt 2935
>gb|DQ226853.1| Boechera divaricarpa isolate SLW-C-D09 mRNA sequence Length = 646 Score = 99.6 bits (50), Expect = 8e-18 Identities = 122/146 (83%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| ||||||||||| |||| || || || || ||||| || ||||| Sbjct: 407 ggcggtttaggtgcttacagtgactcaagaggcattccaggagttaggaaagaggttgct 466 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 467 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatatttctcactgat 526 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 527 ggagctagcaaaggtgtgatgcaaat 552
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 594 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 653 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 654 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 713 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 714 ggagctagcaaaggtgtgatgcaaat 739 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 939 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 991
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 628 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 687 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 688 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 747 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 748 ggagctagcaaaggtgtgatgcaaat 773 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 973 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 1025
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 411 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 637 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 689
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 416 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 475 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 476 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 535 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 536 ggagctagcaaaggtgtgatgcaaat 561 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 761 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 813
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 517 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 743 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 795
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 382 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 441 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 442 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 501 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 502 ggagctagcaaaggtgtgatgcaaat 527
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 439 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 498 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 499 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 558 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 559 ggagctagcaaaggtgtgatgcaaat 584 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 784 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 836
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 99 aggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagagctt 158 ||||| || ||||| ||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 32 aggaaagaggttgctgagttcattcaacggcgtgatgggtatccaagtgacccagaactc 91 Query: 159 atttacctcacagatggtgccagcaaaggtgtgatgcaaat 199 || | ||||| ||||| || |||||||||||||||||||| Sbjct: 92 atctttctcactgatggagctagcaaaggtgtgatgcaaat 132 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 332 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 384
>gb|AY108756.1| Zea mays PCO087866 mRNA sequence Length = 1198 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 372 gcacggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctact 431 |||||||| ||||||||| |||||||| | |||||||| ||||| |||| ||| || ||| Sbjct: 69 gcacggtccaagggaatctctgttcgaccgatggtgatgataaatccagnaaatcccact 128 Query: 432 ggccaatgcctaagtgaagc 451 ||||||||||| |||||||| Sbjct: 129 ggccaatgccttagtgaagc 148
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 75.8 bits (38), Expect = 1e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 517 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 743 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 795
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 75.8 bits (38), Expect = 1e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 54 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 113 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 114 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 173 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 411 Query: 174 ggtgccagcaaaggtgtgatgcaaat 199 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 637 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 689
>emb|AM260496.1| Platanus acerifolia partial mRNA for alanine aminotransferase (at gene) Length = 568 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 384 ggaatcactgttcgagcaatggtgataataaacccaggaaaccctactgg 433 ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 137 ggaattactgtccgagccatggtgattataaacccaggaaaccctactgg 186 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 287 tggtggttctcttgtcccatattatttggaaga 319 ||||||||||||||| ||||||| | ||||||| Sbjct: 40 tggtggttctcttgttccatattttctggaaga 72
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 398 agcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 450 |||||||||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 79721 agcaatggtgatcataaatcctggaaaccctactggtcaatgccttagtgaag 79669 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 99 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 142 ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 80405 aggaaagaagtggcagagtttatacagaggcgtgatggttatcc 80362
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 448 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 507 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 508 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 567 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 568 aaaggtgtgatgcaaat 584 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 784 gcaatggtgattattaaccccggaaacccaactggcca 821
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 466 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 525 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 526 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 585 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 586 aaaggtgtgatgcaaat 602 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 802 gcaatggtgattattaaccccggaaacccaactggcca 839
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 482 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 541 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 542 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 601 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 602 aaaggtgtgatgcaaat 618 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 818 gcaatggtgattattaaccccggaaacccaactggcca 855
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 301 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 360 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 361 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 420 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 421 aaaggtgtgatgcaaat 437 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 637 gcaatggtgattattaaccccggaaacccaactggcca 674
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 63 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 122 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 320 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 379 Query: 123 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 182 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 380 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 439 Query: 183 aaaggtgtgatgcaaat 199 ||||||||||||||||| Sbjct: 440 aaaggtgtgatgcaaat 456 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 656 gcaatggtgattattaaccccggaaacccaactggcca 693
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 61 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 120 ||||||| || |||||||||||||| | || || || ||| ||||||| || ||||||| Sbjct: 35227 taggtgcttatagtgactcccgaggccttccaggagtgaggcaggaagtggcagagttca 35168 Query: 121 ttcagaggcgtgatgggtatcc 142 | || ||||||||||| ||||| Sbjct: 35167 tacaaaggcgtgatggttatcc 35146 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 398 agcaatggtgataataaacccaggaaaccctactggccaatg 439 |||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 34255 agcaatggtgatcataaaccctggaaatcctactggtcaatg 34214 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 144 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgca 196 |||||||||||||| || || || || |||||||||||||| | ||||||||| Sbjct: 35022 agtgatccagagctcatatatcttactgatggtgccagcaaggctgtgatgca 34970
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 127 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 186 |||||||||| ||||| || |||||||| || || | || || ||||| || ||||||| Sbjct: 490 ggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagcaaag 549 Query: 187 gtgtgatgcaaat 199 ||||||||||||| Sbjct: 550 gtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 99 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 142 ||||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 46944 aggaaagaggttgctgagttcattcaacggcgtgatgggtatcc 46901 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 165 ctcacagatggtgccagcaaaggtgtgatgcaaat 199 ||||| ||||| || |||||||||||||||||||| Sbjct: 46795 ctcactgatggagctagcaaaggtgtgatgcaaat 46761 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 399 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagc 451 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| Sbjct: 46392 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagc 46340
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 64504 gcaatggtgattattaaccccggaaacccaactggcca 64541 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 171 gatggtgccagcaaaggtgtgatgcaaat 199 ||||| || |||||||||||||||||||| Sbjct: 63896 gatggagcgagcaaaggtgtgatgcaaat 63924
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 399 gcaatggtgataataaacccaggaaaccctactggcca 436 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 89998 gcaatggtgattattaaccccggaaacccaactggcca 89961 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 gatggtgccagcaaaggtgtgatgcaaat 199 ||||| || |||||||||||||||||||| Sbjct: 90606 gatggagcgagcaaaggtgtgatgcaaat 90578
>gb|AY105956.1| Zea mays PCO123780 mRNA sequence Length = 1000 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 388 tcactgttcgagcaatggtgataataaacccaggaaaccctactgg 433 |||||||| |||| |||||| ||||||| || || ||||||||||| Sbjct: 729 tcactgttagagctatggtggtaataaatcccggcaaccctactgg 774
>gb|BC116486.1| Danio rerio cDNA clone IMAGE:7432378, partial cds Length = 1596 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 ggtcaaagggaatcactgttc 396 ||||||||||||||||||||| Sbjct: 728 ggtcaaagggaatcactgttc 748
>gb|BC096812.1| Danio rerio sb:cb620, mRNA (cDNA clone IMAGE:7225022), partial cds Length = 2509 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 ggtcaaagggaatcactgttc 396 ||||||||||||||||||||| Sbjct: 710 ggtcaaagggaatcactgttc 730
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 cccatattatttggaagaaga 322 ||||||||||||||||||||| Sbjct: 91227 cccatattatttggaagaaga 91207
>ref|XM_689815.1| PREDICTED: Danio rerio similar to MGC81939 protein (LOC566540), mRNA Length = 996 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 ggtcaaagggaatcactgttc 396 ||||||||||||||||||||| Sbjct: 686 ggtcaaagggaatcactgttc 706
>emb|BX294181.5| Zebrafish DNA sequence from clone CH211-284E13 in linkage group 5, complete sequence Length = 171388 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 ggtcaaagggaatcactgttc 396 ||||||||||||||||||||| Sbjct: 21389 ggtcaaagggaatcactgttc 21369
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gctttattctgctgccattt 279 |||||||||||||||||||| Sbjct: 130335 gctttattctgctgccattt 130354
>ref|XM_775420.1| PREDICTED: Strongylocentrotus purpuratus similar to PRP3 pre-mRNA processing factor 3 homolog (LOC575001), mRNA Length = 1716 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctctttggtggttctcttg 300 |||||||||||||||||||| Sbjct: 112 cctctttggtggttctcttg 93
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 791217 ttccacaatacccgctttat 791236
>emb|BX294140.1| Pirellula sp. strain 1 complete genome; segment 8/24 Length = 307050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ccgccaatcagttgcagaag 372 |||||||||||||||||||| Sbjct: 205832 ccgccaatcagttgcagaag 205813
>emb|BX470212.6| Zebrafish DNA sequence from clone CH211-229H7 in linkage group 14, complete sequence Length = 94121 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 atggtgataataaacccaggaaac 425 |||||||||| ||||||||||||| Sbjct: 3093 atggtgataaaaaacccaggaaac 3116
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 821262 ttccacaatacccgctttat 821281
>gb|AC078935.5| Staphylococcus aureus clone sabac-7, complete sequence Length = 53354 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 20568 ttccacaatacccgctttat 20587
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 829669 ttccacaatacccgctttat 829688
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 741076 ttccacaatacccgctttat 741095
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 808068 ttccacaatacccgctttat 808087
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 agcacggtcaaagggaatca 390 |||||||||||||||||||| Sbjct: 28860087 agcacggtcaaagggaatca 28860068 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaata 256 ||||||||||||||||| |||||| Sbjct: 14752462 gattttggtccctgttctacaata 14752439
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaata 256 ||||||||||||||||| |||||| Sbjct: 6400 gattttggtccctgttctacaata 6377
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 792789 ttccacaatacccgctttat 792808
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 797069 ttccacaatacccgctttat 797088
>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200061 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 agagcttatttacctcacag 171 |||||||||||||||||||| Sbjct: 106374 agagcttatttacctcacag 106355
>emb|AJ328439.1|HSA328439 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4-AD9RS Length = 715 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cggcggcttaggtgcgtaca 72 |||||||||||||||||||| Sbjct: 11 cggcggcttaggtgcgtaca 30
>emb|AL136501.4|CNS01DW8 Human chromosome 14 DNA sequence BAC R-804L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180583 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tctgctgccatttccctctt 286 |||||||||||||||||||| Sbjct: 46821 tctgctgccatttccctctt 46840
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 835458 ttccacaatacccgctttat 835477
>emb|BX005218.6| Zebrafish DNA sequence from clone CH211-127L12 in linkage group 14, complete sequence Length = 183670 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 atggtgataataaacccaggaaac 425 |||||||||| ||||||||||||| Sbjct: 53021 atggtgataaaaaacccaggaaac 53044
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 agcacggtcaaagggaatca 390 |||||||||||||||||||| Sbjct: 72249 agcacggtcaaagggaatca 72230
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gattttggtccctgttccacaata 256 ||||||||||||||||| |||||| Sbjct: 92116 gattttggtccctgttctacaata 92093
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttccacaatacccgctttat 266 |||||||||||||||||||| Sbjct: 762048 ttccacaatacccgctttat 762067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,353,235 Number of Sequences: 3902068 Number of extensions: 3353235 Number of successful extensions: 57575 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57297 Number of HSP's gapped (non-prelim): 274 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)