| Clone Name | baal19n18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450593.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1102 Score = 595 bits (300), Expect = e-167 Identities = 507/576 (88%) Strand = Plus / Plus Query: 3 ggggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacgg 62 |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 196 ggggaagaagcggaaggcggaggcggcgcggctggaggagacggacagggcgctgtacgg 255 Query: 63 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 122 |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 256 ggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcca 315 Query: 123 gaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctt 182 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 316 gaagctctccttccaggccggcgagcgccacgccatggaaaagctctatgaatggatctt 375 Query: 183 aagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagca 242 || ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| Sbjct: 376 gaggcagcatgaaaatggcttgaggctgacagttgctgatatagcctcgcacatccagca 435 Query: 243 tgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagcca 302 ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||||||| Sbjct: 436 cgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaagcca 495 Query: 303 aagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagctt 362 ||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | ||| Sbjct: 496 aagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaaactt 555 Query: 363 atttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgc 422 |||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| || || Sbjct: 556 atttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaaatgc 615 Query: 423 actatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgc 482 |||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| ||||| Sbjct: 616 actatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcgatgc 675 Query: 483 aggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatc 542 || ||||| || |||||| | |||||| | || | |||||||| ||||| ||||| Sbjct: 676 ggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgattcatc 735 Query: 543 catggacatgcattcggacagcccagctcacgactc 578 ||||||||||||||| |||||||||||||| ||||| Sbjct: 736 catggacatgcattcagacagcccagctcatgactc 771
>dbj|AK071395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095O09, full insert sequence Length = 1102 Score = 595 bits (300), Expect = e-167 Identities = 507/576 (88%) Strand = Plus / Plus Query: 3 ggggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacgg 62 |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 196 ggggaagaagcggaaggcggaggcggcgcggctggaggagacggacagggcgctgtacgg 255 Query: 63 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 122 |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 256 ggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcca 315 Query: 123 gaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctt 182 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 316 gaagctctccttccaggccggcgagcgccacgccatggaaaagctctatgaatggatctt 375 Query: 183 aagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagca 242 || ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| Sbjct: 376 gaggcagcatgaaaatggcttgaggctgacagttgctgatatagcctcgcacatccagca 435 Query: 243 tgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagcca 302 ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||||||| Sbjct: 436 cgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaagcca 495 Query: 303 aagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagctt 362 ||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | ||| Sbjct: 496 aagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaaactt 555 Query: 363 atttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgc 422 |||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| || || Sbjct: 556 atttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaaatgc 615 Query: 423 actatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgc 482 |||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| ||||| Sbjct: 616 actatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcgatgc 675 Query: 483 aggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatc 542 || ||||| || |||||| | |||||| | || | |||||||| ||||| ||||| Sbjct: 676 ggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgattcatc 735 Query: 543 catggacatgcattcggacagcccagctcacgactc 578 ||||||||||||||| |||||||||||||| ||||| Sbjct: 736 catggacatgcattcagacagcccagctcatgactc 771
>emb|AJ234562.1|HVU234562 Hordeum vulgare genomic DNA fragment; clone MWG0803 Length = 598 Score = 480 bits (242), Expect = e-132 Identities = 242/242 (100%) Strand = Plus / Plus Query: 372 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 68 Query: 432 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 128 Query: 492 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 188 Query: 552 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 248 Query: 612 aa 613 || Sbjct: 249 aa 250
>emb|AJ234450.1|HVU234450 Hordeum vulgare partial mRNA; clone cMWG0770 Length = 594 Score = 480 bits (242), Expect = e-132 Identities = 242/242 (100%) Strand = Plus / Plus Query: 372 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 62 Query: 432 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 122 Query: 492 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 182 Query: 552 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 242 Query: 612 aa 613 || Sbjct: 243 aa 244
>gb|AY107736.1| Zea mays PCO090313 mRNA sequence Length = 1090 Score = 400 bits (202), Expect = e-108 Identities = 490/586 (83%) Strand = Plus / Plus Query: 4 gggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacggc 63 ||||||||||| |||||||||||||| || ||||| |||||||||||||| | ||||| Sbjct: 243 gggaagaagcgcaaggcggaggcggcacgcctggaggagacggaccgggcgctctacggg 302 Query: 64 gcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccag 123 || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 303 gccttccggggcgccgccaactcgctctcgcagctctacacgctcggcatgggcgcgcag 362 Query: 124 aagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctta 183 ||| ||||||||| |||||||| || |||||||||||||| || |||||||||||| | Sbjct: 363 aaggcctccttccacgccggcgaacgtcacgccatggaaaaactttatgaatggatcctg 422 Query: 184 agacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcat 243 || ||||| |||||||| |||||||| ||||| | |||| ||||||| || |||||||| Sbjct: 423 aggcagcacgaaaatggtttgaggctaacagttgctgatgtagcctcccatatccagcat 482 Query: 244 gagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagccaa 303 ||||||||||||||||| |||||| | | ||||||||||| |||||||| | |||||| Sbjct: 483 gagattcagtatggaggtgacaatgcatcagcctctccaaggtcacaataccctagccaa 542 Query: 304 agcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagctta 363 |||||| | || |||| || ||||||||||||| |||||||||||| | |||||| Sbjct: 543 agcactgcaccgacaatgcacattcccaacacaagcaaccagcaaccatcgccaagctta 602 Query: 364 tttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgca 423 ||||| ||||||||| |||||||| ||| ||||||| || ||||||||| | |||| Sbjct: 603 tttgcttcaggaaaccctgggttgacacagtccaagaattccatggtcttttcaagcgca 662 Query: 424 ctatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgca 483 ||||||||||| | || ||| |||||| ||| ||||| || || |||| ||||||||| Sbjct: 663 ttatccagccccatccggcggagcctgccaccttaccacctagagcaggacggggatgca 722 Query: 484 ggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatcc 543 || ||||| |||||||| |||||| ||| ||||||||||| || || || ||| Sbjct: 723 gggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgattcgtcc 782 Query: 544 atggacatgcattcggacagcccagctcacgactcctcctgagcag 589 ||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 783 atggacatgcactcggacagcccagctcatgactcctactgagcag 828
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 250 bits (126), Expect = 5e-63 Identities = 150/158 (94%) Strand = Plus / Plus Query: 3 ggggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacgg 62 |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 11681805 ggggaagaagcggaaggcggaggcggcgcggctggaggagacggacagggcgctgtacgg 11681864 Query: 63 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 122 |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 11681865 ggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcca 11681924 Query: 123 gaagctctccttccaggccggcgagcgccacgccatgg 160 |||||||||||||||||||||||||||||||||||||| Sbjct: 11681925 gaagctctccttccaggccggcgagcgccacgccatgg 11681962 Score = 238 bits (120), Expect = 2e-59 Identities = 285/340 (83%) Strand = Plus / Plus Query: 239 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 298 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 11685796 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 11685855 Query: 299 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 358 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 11685856 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 11685915 Query: 359 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 418 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 11685916 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 11685975 Query: 419 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 478 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 11685976 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 11686035 Query: 479 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 538 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 11686036 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 11686095 Query: 539 catccatggacatgcattcggacagcccagctcacgactc 578 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 11686096 catccatggacatgcattcagacagcccagctcatgactc 11686135 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 159 ggaaaagctgtatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtggg 218 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 11684237 ggaaaagctctatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgc 11684296 Query: 219 tgatatagcctcgcacgtccag 240 |||||||||||||||| ||||| Sbjct: 11684297 tgatatagcctcgcacatccag 11684318
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 250 bits (126), Expect = 5e-63 Identities = 150/158 (94%) Strand = Plus / Plus Query: 3 ggggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacgg 62 |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 116439 ggggaagaagcggaaggcggaggcggcgcggctggaggagacggacagggcgctgtacgg 116498 Query: 63 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 122 |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 116499 ggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcca 116558 Query: 123 gaagctctccttccaggccggcgagcgccacgccatgg 160 |||||||||||||||||||||||||||||||||||||| Sbjct: 116559 gaagctctccttccaggccggcgagcgccacgccatgg 116596 Score = 238 bits (120), Expect = 2e-59 Identities = 285/340 (83%) Strand = Plus / Plus Query: 239 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 298 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 120430 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 120489 Query: 299 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 358 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 120490 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 120549 Query: 359 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 418 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 120550 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 120609 Query: 419 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 478 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 120610 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 120669 Query: 479 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 538 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 120670 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 120729 Query: 539 catccatggacatgcattcggacagcccagctcacgactc 578 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 120730 catccatggacatgcattcagacagcccagctcatgactc 120769 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 159 ggaaaagctgtatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtggg 218 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 118871 ggaaaagctctatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgc 118930 Query: 219 tgatatagcctcgcacgtccag 240 |||||||||||||||| ||||| Sbjct: 118931 tgatatagcctcgcacatccag 118952
>gb|BT018115.1| Zea mays clone EL01N0553H03.c mRNA sequence Length = 1357 Score = 236 bits (119), Expect = 7e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 4 gggaagaagcggaaggcggaggcggcgcggctggacgagacggaccgggccatgtacggc 63 ||||||||||| |||||||||||||| || ||||| |||||||||||||| | ||||| Sbjct: 195 gggaagaagcgcaaggcggaggcggcacgcctggaggagacggaccgggcgctctacggg 254 Query: 64 gcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccag 123 || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 255 gccttccggggcgccgccaactcgctctcgcagctctacacgctcggcatgggcgcgcag 314 Query: 124 aagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctta 183 ||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||| | Sbjct: 315 aaggcctccttccacgccggcgaacgccacgccatggaaaaactttatgaatggatcctg 374 Query: 184 agacagcatgaaaatggcttgaggctgacagtgggtgatatagcctc 230 || ||||| |||||||| |||||||| ||||| | |||| ||||||| Sbjct: 375 aggcagcacgaaaatggtttgaggctaacagttgctgatgtagcctc 421 Score = 196 bits (99), Expect = 6e-47 Identities = 288/351 (82%) Strand = Plus / Plus Query: 239 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 298 |||||||||||||||||||||| |||||| | | ||||||||||| |||||||| | | Sbjct: 770 agcatgagattcagtatggaggtgacaatgcatcagcctctccaaggtcacaatacccta 829 Query: 299 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 358 ||||||||||| | || |||| || ||||||||||||| |||||||||||| | | Sbjct: 830 gccaaagcactgcaccgacaatgcacattcccaacacaagcaaccagcaaccatcgccaa 889 Query: 359 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 418 |||||||||| | ||||||||| |||||||| ||| ||||||| || ||||||||| | Sbjct: 890 gcttatttgctccaggaaaccctgggttgacacagtccaagaattccatggtcttttcaa 949 Query: 419 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 478 |||| ||||||||||| | || ||| |||||||||| ||||| || || |||| |||| Sbjct: 950 gcgcattatccagccccatccggcggagcctgcaaccttaccacctagagcaggacgggg 1009 Query: 479 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 538 ||||||| ||||| |||||||| |||||| ||| ||||||||||| || || | Sbjct: 1010 atgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgatt 1069 Query: 539 catccatggacatgcattcggacagcccagctcacgactcctcctgagcag 589 | |||||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 1070 cgtccatggacatgcactcggacagcccagctcatgactcctactgagcag 1120
>ref|XM_482242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 78 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 137 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 138 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 197 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 198 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 257 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 258 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 317 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 318 atccagcacgagattgagtatggaggtgacaat 350
>ref|XM_507223.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1009 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 99 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 158 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 159 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 218 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 219 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 278 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 279 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 338 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 339 atccagcacgagattgagtatggaggtgacaat 371
>ref|XM_507222.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1358 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 184 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 243 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 244 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 303 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 304 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 363 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 364 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 423 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 424 atccagcacgagattgagtatggaggtgacaat 456
>dbj|AK109817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A02, full insert sequence Length = 1358 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 184 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 243 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 244 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 303 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 304 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 363 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 364 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 423 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 424 atccagcacgagattgagtatggaggtgacaat 456
>dbj|AK098973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E18, full insert sequence Length = 913 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 78 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 137 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 138 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 197 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 198 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 257 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 258 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 317 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 318 atccagcacgagattgagtatggaggtgacaat 350
>dbj|AK060114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D12, full insert sequence Length = 1009 Score = 139 bits (70), Expect = 1e-29 Identities = 222/273 (81%), Gaps = 6/273 (2%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 99 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 158 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 159 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 218 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaa 174 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 219 gcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctaccag 278 Query: 175 tggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcac 234 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || ||| Sbjct: 279 tggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatcccac 338 Query: 235 gtccagcatgagattcagtatggaggcgacaat 267 ||||||| |||||| |||||||||| |||||| Sbjct: 339 atccagcacgagattgagtatggaggtgacaat 371
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 6e-16 Identities = 133/162 (82%), Gaps = 6/162 (3%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 18949745 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 18949804 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 18949805 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 18949864 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgcc 156 | | |||| ||||||||||| ||||| |||||||||||| Sbjct: 18949865 gcccaccagcgcctctccttccacgccggtgagcgccacgcc 18949906 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 gacagcatgaaaatggcttgaggctgacagt 215 |||||||||||| |||||||||||| ||||| Sbjct: 18951508 gacagcatgaaattggcttgaggctcacagt 18951538
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 93.7 bits (47), Expect = 6e-16 Identities = 133/162 (82%), Gaps = 6/162 (3%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggaggcggcgcggctgg------acgagacggaccgggcc 54 ||||||| ||||||||||||||||||||||||| || | ||| | |||||||| Sbjct: 34665 gcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggcg 34724 Query: 55 atgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatg 114 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 34725 ctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccggt 34784 Query: 115 ggcggccagaagctctccttccaggccggcgagcgccacgcc 156 | | |||| ||||||||||| ||||| |||||||||||| Sbjct: 34785 gcccaccagcgcctctccttccacgccggtgagcgccacgcc 34826 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 185 gacagcatgaaaatggcttgaggctgacagt 215 |||||||||||| |||||||||||| ||||| Sbjct: 36428 gacagcatgaaattggcttgaggctcacagt 36458
>ref|NM_192567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 76 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 135 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 136 ttccaggccggcgagcgccac 156
>dbj|AK061874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A07, full insert sequence Length = 977 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 175 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 234 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 235 ttccaggccggcgagcgccac 255
>dbj|AB110176.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPG014 Length = 1095 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 210 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 269 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 270 ttccaggccggcgagcgccac 290
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 22994226 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 22994167 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 22994166 ttccaggccggcgagcgccac 22994146 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 64 gcgttccggggcgccgccaactcgctctcgcag 96 |||||| |||||||||||||| |||| |||||| Sbjct: 4325748 gcgttcaggggcgccgccaacgcgctgtcgcag 4325780
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 64632 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 64573 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 64572 ttccaggccggcgagcgccac 64552
>dbj|AK099494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027F04, full insert sequence Length = 1095 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 228 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 287 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 288 ttccaggccggcgagcgccac 308
>dbj|AK066191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051C07, full insert sequence Length = 2598 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 195 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 254 Query: 133 ttccaggccggcgagcgccac 153 ||||||||||||||||||||| Sbjct: 255 ttccaggccggcgagcgccac 275
>gb|AF479038.1| Triticum aestivum holocarboxylase synthetase mRNA, partial cds Length = 627 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 73 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 132 ||||||||||| || ||||| ||||| ||| | | ||||||| | |||||||||||| Sbjct: 100 ggcgccgccaattccctctcccagctatactcccaggccatggcccagcagaagctctcc 159 Query: 133 ttccaggccggcgagcgccacgccatggaaaagct 167 |||||||| |||||||| |||||| | |||||||| Sbjct: 160 ttccaggctggcgagcggcacgccctcgaaaagct 194
>ref|NM_125874.2| Arabidopsis thaliana unknown protein AT5G64780 mRNA, complete cds Length = 839 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 53 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 101 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 223 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 271
>gb|AY091256.1| Arabidopsis thaliana unknown protein (At5g64780) mRNA, complete cds Length = 559 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 53 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 101 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 53 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 101
>gb|AY074385.1| Arabidopsis thaliana unknown protein (At5g64780) mRNA, complete cds Length = 886 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 53 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 101 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 223 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 271
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7 Length = 39645 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 53 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 101 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 38883 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 38835
>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence Length = 185393 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 189 gcatgaaaatggcttgaggctga 211 ||||||||||||||||||||||| Sbjct: 132570 gcatgaaaatggcttgaggctga 132548
>ref|XM_550412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 64 gcgttccggggcgccgccaactcgctctcgcag 96 |||||| |||||||||||||| |||| |||||| Sbjct: 73 gcgttcaggggcgccgccaacgcgctgtcgcag 105
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 Length = 207355 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 cttccaggccggcgagcgcca 152 ||||||||||||||||||||| Sbjct: 124344 cttccaggccggcgagcgcca 124324
>gb|AC098861.2| Homo sapiens BAC clone RP11-297J2 from 4, complete sequence Length = 185791 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 aaaagctgtatgaatggatct 181 ||||||||||||||||||||| Sbjct: 112631 aaaagctgtatgaatggatct 112611
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggcggaggcggcgcggctgga 38 ||||||||||||||||||||| Sbjct: 12785904 ggcggaggcggcgcggctgga 12785884
>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome Length = 11930 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 ccttccaggccggcgagcgcc 151 ||||||||||||||||||||| Sbjct: 3277 ccttccaggccggcgagcgcc 3257
>gb|AY085304.1| Arabidopsis thaliana clone 144066 mRNA, complete sequence Length = 779 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 53 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 101 ||||||| | |||||| || ||||| || || ||||||||||||||||| Sbjct: 162 ccatgtatgacgcgtttcgaggcgctgctaattcgctctcgcagctcta 210
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 64 gcgttccggggcgccgccaactcgctctcgcag 96 |||||| |||||||||||||| |||| |||||| Sbjct: 105518 gcgttcaggggcgccgccaacgcgctgtcgcag 105550
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ggcggaggcggcgcggctgga 38 ||||||||||||||||||||| Sbjct: 44028 ggcggaggcggcgcggctgga 44008
>emb|X84647.1|ATLEUCD A.teichomyceticus leuC and leuD genes Length = 2982 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ccggcgagcgccacgccatgg 160 ||||||||||||||||||||| Sbjct: 554 ccggcgagcgccacgccatgg 534
>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence Length = 182866 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 gctgctacacagagatggaa 610 |||||||||||||||||||| Sbjct: 128727 gctgctacacagagatggaa 128746
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 ccttccaggccggcgagcgccacg 154 |||||||||||||||||| ||||| Sbjct: 107606 ccttccaggccggcgagctccacg 107583
>ref|XM_523884.1| PREDICTED: Pan troglodytes similar to Transcription factor GATA-6 (GATA binding factor-6) (LOC468495), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcggaggcggcgcggctgg 37 |||||||||||||||||||| Sbjct: 667 ggcggaggcggcgcggctgg 686
>ref|XM_873057.1| PREDICTED: Bos taurus hypothetical protein LOC613525 (LOC613525), mRNA Length = 995 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 gggaagaagcggaaggcggaggcggcgc 31 |||| |||||||||||| |||||||||| Sbjct: 428 gggaggaagcggaaggccgaggcggcgc 455
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gaggcggcgcggctggacga 41 |||||||||||||||||||| Sbjct: 12096702 gaggcggcgcggctggacga 12096721
>ref|XM_543327.2| PREDICTED: Canis familiaris similar to kinesin family member 1B (LOC486202), mRNA Length = 5076 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cggaggcggcgcggctggac 39 |||||||||||||||||||| Sbjct: 2392 cggaggcggcgcggctggac 2373
>emb|BX548019.36| Zebrafish DNA sequence from clone DKEY-20D1 in linkage group 6, complete sequence Length = 202848 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 aagacagcatgaaaatggct 202 |||||||||||||||||||| Sbjct: 121819 aagacagcatgaaaatggct 121800
>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tccaagatcacaatatgcaa 298 |||||||||||||||||||| Sbjct: 112070 tccaagatcacaatatgcaa 112051
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 ccttccaggccggcgagcgccacg 154 |||||||||||||||||| ||||| Sbjct: 35404 ccttccaggccggcgagctccacg 35381
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccgtgcgccggggcctgcaaccat 457 ||||||||||||||||||| |||| Sbjct: 715484 ccgtgcgccggggcctgcacccat 715507
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ggctgacagtgggtgatata 225 |||||||||||||||||||| Sbjct: 135741 ggctgacagtgggtgatata 135722
>gb|AC016919.15| Homo sapiens 3 BAC RP11-220J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gcaagccaaagcactcaggc 314 |||||||||||||||||||| Sbjct: 140245 gcaagccaaagcactcaggc 140226
>emb|X82362.1|AOHIS2B A.officinalis mRNA for histone 2B Length = 492 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 gcggggaagaagcggaaggcggag 24 ||||||||||||| |||||||||| Sbjct: 84 gcggggaagaagccgaaggcggag 107
>emb|X58831.1|CSGDHANC C.sorokiniana gdhANC gene for NADP-specific glutamate dehydrogenase (ANC=Ammonium-inducible, Nuclear encoded, Chloroplastic isoenzyme) Length = 9872 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 cgactcatccatggacatgc 553 |||||||||||||||||||| Sbjct: 9375 cgactcatccatggacatgc 9356
>gb|AE005970.1| Caulobacter crescentus CB15 section 296 of 359 of the complete genome Length = 12680 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggcggaggcggcgcggctgg 37 |||||||||||||||||||| Sbjct: 12126 ggcggaggcggcgcggctgg 12107
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgcggctggacgagacgg 46 |||||||||||||||||||| Sbjct: 3057143 ggcgcggctggacgagacgg 3057124
>emb|BX571699.10| Zebrafish DNA sequence from clone DKEYP-116G9 in linkage group 6, complete sequence Length = 173467 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 aagacagcatgaaaatggct 202 |||||||||||||||||||| Sbjct: 22637 aagacagcatgaaaatggct 22656
>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds Length = 11462 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcggaggcggcgcggctgg 37 |||||||||||||||||||| Sbjct: 6209 ggcggaggcggcgcggctgg 6228
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gaggcggcgcggctggacga 41 |||||||||||||||||||| Sbjct: 12093465 gaggcggcgcggctggacga 12093484
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gaggcggcgcggctggacga 41 |||||||||||||||||||| Sbjct: 117282 gaggcggcgcggctggacga 117301
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttccaggccggcgagcgcca 152 |||||||||||||||||||| Sbjct: 2734348 ttccaggccggcgagcgcca 2734329
>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence Length = 185967 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ggaaggcggaggcggcgcgg 33 |||||||||||||||||||| Sbjct: 84978 ggaaggcggaggcggcgcgg 84959
>emb|BX004878.8| Zebrafish DNA sequence from clone DKEY-11H2 in linkage group 6, complete sequence Length = 254657 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 aagacagcatgaaaatggct 202 |||||||||||||||||||| Sbjct: 184424 aagacagcatgaaaatggct 184443
>gb|U84003.1|HSTSBIN5 Homo sapiens bridging integrator protein-1 (BIN1) gene, exons 7-12 Length = 8310 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ggaaggcggaggcggcgcgg 33 |||||||||||||||||||| Sbjct: 4258 ggaaggcggaggcggcgcgg 4277
>dbj|AK116758.1| Ciona intestinalis cDNA, clone:ciad081o15, full insert sequence Length = 1921 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ccatggaaaagctgtatgaa 174 |||||||||||||||||||| Sbjct: 1381 ccatggaaaagctgtatgaa 1400
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gaggctgacagtgggtgata 223 |||||||||||||||||||| Sbjct: 159286 gaggctgacagtgggtgata 159267
>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13, complete sequence Length = 96887 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gaggctgacagtgggtgata 223 |||||||||||||||||||| Sbjct: 60479 gaggctgacagtgggtgata 60460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,189,132 Number of Sequences: 3902068 Number of extensions: 4189132 Number of successful extensions: 85422 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84755 Number of HSP's gapped (non-prelim): 660 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)