| Clone Name | baal19m18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds Length = 1560 Score = 145 bits (73), Expect = 3e-32 Identities = 96/104 (92%) Strand = Plus / Plus Query: 1 accatggggcagaggctcctcttantggtgaccacttgtctgtgggccatttcatgcgcc 60 |||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| Sbjct: 20 accatggggcagaggctcctattactggtgaccacctgtctgtgggctctttcatgcgcc 79 Query: 61 gtgccgcaccatgcttcctcgcgtgacggactgctaaggatcaa 104 ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 80 gtgccgcaccacgcttcctcgcgtgatggactgcttaggatcaa 123
>gb|AC131746.3| Mus musculus BAC clone RP23-62F20 from 3, complete sequence Length = 201620 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cacttgtctgtgggccatttc 53 ||||||||||||||||||||| Sbjct: 87402 cacttgtctgtgggccatttc 87382
>gb|AC153661.4| Mus musculus BAC clone RP23-152L5 from chromosome 3, complete sequence Length = 203476 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cacttgtctgtgggccatttc 53 ||||||||||||||||||||| Sbjct: 186088 cacttgtctgtgggccatttc 186068
>ref|XM_475576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 38.2 bits (19), Expect = 4.6 Identities = 57/70 (81%) Strand = Plus / Plus Query: 11 agaggctcctcttantggtgaccacttgtctgtgggccatttcatgcgccgtgccgcacc 70 |||||| |||||| ||||||| |||||| ||||||| | ||||| ||| ||| || | Sbjct: 8 agaggcacctcttgttggtgacaacttgtttgtgggctctgtcatgtgccttgctgcttc 67 Query: 71 atgcttcctc 80 |||||||||| Sbjct: 68 atgcttcctc 77
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 gtgccgcaccatgcttcct 79 ||||||||||||||||||| Sbjct: 174221 gtgccgcaccatgcttcct 174239
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 4.6 Identities = 57/70 (81%) Strand = Plus / Plus Query: 11 agaggctcctcttantggtgaccacttgtctgtgggccatttcatgcgccgtgccgcacc 70 |||||| |||||| ||||||| |||||| ||||||| | ||||| ||| ||| || | Sbjct: 2115264 agaggcacctcttgttggtgacaacttgtttgtgggctctgtcatgtgccttgctgcttc 2115323 Query: 71 atgcttcctc 80 |||||||||| Sbjct: 2115324 atgcttcctc 2115333
>dbj|AK065206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F13, full insert sequence Length = 1900 Score = 38.2 bits (19), Expect = 4.6 Identities = 57/70 (81%) Strand = Plus / Plus Query: 11 agaggctcctcttantggtgaccacttgtctgtgggccatttcatgcgccgtgccgcacc 70 |||||| |||||| ||||||| |||||| ||||||| | ||||| ||| ||| || | Sbjct: 160 agaggcacctcttgttggtgacaacttgtttgtgggctctgtcatgtgccttgctgcttc 219 Query: 71 atgcttcctc 80 |||||||||| Sbjct: 220 atgcttcctc 229 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 523,551 Number of Sequences: 3902068 Number of extensions: 523551 Number of successful extensions: 33776 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33759 Number of HSP's gapped (non-prelim): 17 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)