ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19m14 |
|---|---|
| Clone Library Name | barley_pub |
>OPT3_ARATH (O23482) Probable oligopeptide transporter 3 (AtOPT3)| Length = 737 Score = 259 bits (662), Expect = 4e-69 Identities = 116/140 (82%), Positives = 125/140 (89%) Frame = +2 Query: 5 GCTGNLVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWL 184 G NLV F++GAVLPVPVW LS+ FP KKWI L+N+PVISYGFAGMPPATPTNIASWL Sbjct: 598 GMYRNLVGFFLIGAVLPVPVWALSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWL 657 Query: 185 VTGTVFNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVDH 364 VTGT+FN+FVF Y K WWQKYNYVLSAALDAGTAFMGVL+FFALQNA HDLKWWGTEVDH Sbjct: 658 VTGTIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHDLKWWGTEVDH 717 Query: 365 CPLATCPTAPGIVVKGCPVF 424 CPLA+CPTAPGI KGCPVF Sbjct: 718 CPLASCPTAPGIKAKGCPVF 737
>OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4)| Length = 729 Score = 180 bits (456), Expect = 3e-45 Identities = 81/142 (57%), Positives = 100/142 (70%), Gaps = 3/142 (2%) Frame = +2 Query: 5 GCTGNLV---WLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIA 175 G GN W F+ GA+ PV VW L +AFP++ WI LVN+PV+ A MPPAT N Sbjct: 587 GSQGNYAAMNWFFLGGALGPVIVWSLHKAFPKRSWIPLVNLPVLLGATAMMPPATAVNYN 646 Query: 176 SWLVTGTVFNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTE 355 SW++ GT+FN FVFRYRK WWQ+YNYVLSAA+DAG AFM VL++F++ L WWGT Sbjct: 647 SWILVGTIFNLFVFRYRKSWWQRYNYVLSAAMDAGVAFMAVLLYFSVGMEEKSLDWWGTR 706 Query: 356 VDHCPLATCPTAPGIVVKGCPV 421 +HC LA CPTA G++V GCPV Sbjct: 707 GEHCDLAKCPTARGVIVDGCPV 728
>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)| Length = 766 Score = 174 bits (441), Expect = 2e-43 Identities = 74/133 (55%), Positives = 97/133 (72%) Frame = +2 Query: 26 WLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTVFN 205 W F+VGA+ P+ VWL SR FP ++WI L+N+PV+ + MPPAT N +W++ G + Sbjct: 633 WFFLVGAIAPILVWLASRMFPRQEWIKLINMPVLISATSSMPPATAVNYTTWVLAGFLSG 692 Query: 206 FFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVDHCPLATCP 385 F VFRYR WQ+YNYVLS ALDAG AFMGVL++ L + L WWG E+D CPLA+CP Sbjct: 693 FVVFRYRPNLWQRYNYVLSGALDAGLAFMGVLLYMCLGLENVSLDWWGNELDGCPLASCP 752 Query: 386 TAPGIVVKGCPVF 424 TAPGI+V+GCP++ Sbjct: 753 TAPGIIVEGCPLY 765
>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)| Length = 753 Score = 174 bits (440), Expect = 2e-43 Identities = 79/135 (58%), Positives = 96/135 (71%), Gaps = 2/135 (1%) Frame = +2 Query: 26 WLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTVFN 205 W F++G + PVPVW +R FPEKKWI +++P+I G MP A + SW G VFN Sbjct: 619 WFFLIGFLAPVPVWFFARKFPEKKWIHQIHIPLIFSGANVMPMAKAVHYWSWFAVGIVFN 678 Query: 206 FFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDL-KWWGTE-VDHCPLAT 379 +++FR KGWW ++NY+LSAALDAGTA MGVLI+FALQN + L WWG E DHCPLA Sbjct: 679 YYIFRRYKGWWARHNYILSAALDAGTAVMGVLIYFALQNNNISLPDWWGNENTDHCPLAN 738 Query: 380 CPTAPGIVVKGCPVF 424 CPT GIV KGCPVF Sbjct: 739 CPTEKGIVAKGCPVF 753
>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)| Length = 733 Score = 170 bits (430), Expect = 3e-42 Identities = 75/136 (55%), Positives = 94/136 (69%) Frame = +2 Query: 17 NLVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGT 196 N+ W FV GA+ P V+L SR FP KKWI+ +++PV+ A MPPA+ N SWLV Sbjct: 598 NINWFFVGGAIAPALVYLASRLFPNKKWISDIHIPVLIGATAIMPPASAVNFTSWLVMAF 657 Query: 197 VFNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVDHCPLA 376 VF FVF+YR+ WWQ+YNYVLS +DAGT FM VL+F ALQ + + WWG + CP+A Sbjct: 658 VFGHFVFKYRREWWQRYNYVLSGGMDAGTGFMSVLLFLALQRSEIAIDWWGNSGEGCPVA 717 Query: 377 TCPTAPGIVVKGCPVF 424 CPTA G+VV GCPVF Sbjct: 718 KCPTAKGVVVHGCPVF 733
>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)| Length = 736 Score = 169 bits (427), Expect = 7e-42 Identities = 73/138 (52%), Positives = 98/138 (71%), Gaps = 2/138 (1%) Frame = +2 Query: 17 NLVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGT 196 N+ W F+VGA+ P+ VWL ++ FP + WIA +++PV+ A MPPAT N SWL+ Sbjct: 599 NVNWFFLVGAIAPLLVWLATKMFPAQTWIAKIHIPVLVGATAMMPPATAVNFTSWLIVAF 658 Query: 197 VFNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGT--EVDHCP 370 +F F+F+YR+ WW KYNYVLS LDAG+AFM +L+F AL +++WWG + D CP Sbjct: 659 IFGHFIFKYRRVWWTKYNYVLSGGLDAGSAFMTILLFLALGRKGIEVQWWGNSGDRDTCP 718 Query: 371 LATCPTAPGIVVKGCPVF 424 LA+CPTA G+VVKGCPVF Sbjct: 719 LASCPTAKGVVVKGCPVF 736
>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)| Length = 755 Score = 168 bits (426), Expect = 9e-42 Identities = 76/135 (56%), Positives = 95/135 (70%), Gaps = 2/135 (1%) Frame = +2 Query: 26 WLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTVFN 205 W F++G + PVP W LS+ FPEKKW+ ++VP+I + MP A + SW + G VFN Sbjct: 621 WFFLIGLLAPVPFWYLSKKFPEKKWLKQIHVPLIFSAVSAMPQAKAVHYWSWAIVGVVFN 680 Query: 206 FFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDL-KWWGTE-VDHCPLAT 379 +++FR K WW ++NY+LSAALDAGTA MGVLIFFA QN L WWG E DHCPLA Sbjct: 681 YYIFRRFKTWWARHNYILSAALDAGTAIMGVLIFFAFQNNDISLPDWWGLENSDHCPLAH 740 Query: 380 CPTAPGIVVKGCPVF 424 CP A G+VV+GCPVF Sbjct: 741 CPLAKGVVVEGCPVF 755
>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)| Length = 722 Score = 167 bits (423), Expect = 2e-41 Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 1/136 (0%) Frame = +2 Query: 20 LVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTV 199 L W F+ G + PV VWLL +AFP K WI+ +N+PV+ A MPPAT N W++ G + Sbjct: 561 LNWFFLGGLIGPVLVWLLQKAFPTKTWISQINLPVLLGATAAMPPATSVNFNCWIIVGVI 620 Query: 200 FNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFAL-QNAHHDLKWWGTEVDHCPLA 376 FN+FVF+Y K WWQ+YNYVLSAALDAG AFMGVL++F+L N WWG + ++CPLA Sbjct: 621 FNYFVFKYCKKWWQRYNYVLSAALDAGLAFMGVLLYFSLTMNGISINHWWGAKGENCPLA 680 Query: 377 TCPTAPGIVVKGCPVF 424 +CPTAPG++V VF Sbjct: 681 SCPTAPGVLVDDFTVF 696
>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)| Length = 741 Score = 150 bits (379), Expect = 2e-36 Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 2/134 (1%) Frame = +2 Query: 26 WLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTVFN 205 W F+VGA+ P VWL ++AFP KWI+ ++ PVI + MPPA N SW + VF Sbjct: 607 WFFLVGAIAPFFVWLATKAFPAHKWISKIHFPVILGATSMMPPAMAVNFTSWCIVAFVFG 666 Query: 206 FFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVD--HCPLAT 379 F+++Y++ WW+KYNYVLS LDAGTAFM +LIF ++ L WWG D +C LA+ Sbjct: 667 HFLYKYKRQWWKKYNYVLSGGLDAGTAFMTILIFLSVGRKGIGLLWWGNADDSTNCSLAS 726 Query: 380 CPTAPGIVVKGCPV 421 CPTA G+++ GCPV Sbjct: 727 CPTAKGVIMHGCPV 740
>ISP4_SCHPO (P40900) Sexual differentiation process protein isp4| Length = 785 Score = 87.0 bits (214), Expect = 3e-17 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Frame = +2 Query: 20 LVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTV 199 L + ++ G + + W L + +P+K W L N P+I G +PPATP N +W G Sbjct: 644 LQYFWLAGVLGTILFWALWKKWPQKWWGQL-NGPLIFGGTGYIPPATPVNYLAWSGIGLF 702 Query: 200 FNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDL-KWWGTE 355 FN+++ + WWQKYN+ LSAALD GT +++FF LQ + WWG + Sbjct: 703 FNYYLKKIFADWWQKYNFTLSAALDTGTQLSVIILFFCLQLPMVNFPDWWGND 755
>OPT1_YEAST (P40897) Oligopeptide transporter 1| Length = 799 Score = 81.3 bits (199), Expect = 2e-15 Identities = 38/113 (33%), Positives = 61/113 (53%) Frame = +2 Query: 20 LVWLFVVGAVLPVPVWLLSRAFPEKKWIALVNVPVISYGFAGMPPATPTNIASWLVTGTV 199 L+W F++G + P+ V+ + FP+ K+ ++ PV G +PP+TP N + + Sbjct: 661 LMWFFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFC 720 Query: 200 FNFFVFRYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEV 358 N R+R W+ KYN+V+ A ++AG A V+IF +Q L WWG V Sbjct: 721 LNLIRKRWR-AWFNKYNFVMGAGVEAGVAISVVIIFLCVQYPGGKLSWWGNNV 772
>DIP2_DROME (Q9W0S9) Disco-interacting protein 2| Length = 1773 Score = 33.5 bits (75), Expect = 0.44 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -2 Query: 178 AGDVGGRGRRHPGEAVGDDGHVDERDPFLLRERPAQQPHRHRQHGADHKQPH 23 AG G R G AVGD G+ + R+P + + + +HRQ K H Sbjct: 126 AGAPGYENMRPQGGAVGDPGYQNTREPSAFQNQQSTNNSQHRQRRTQRKVTH 177
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 32.3 bits (72), Expect = 0.97 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +1 Query: 271 RCRHRLHGGAHLLRAPERAPRPQVVGHRGRPLPARHLPHCARHRRQGLPG----LLSTEL 438 R RHR ++ +P R P P+ R P R +P RHRR PG S L Sbjct: 297 RRRHRSRSRSY---SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASL 353 Query: 439 AGASDSA 459 +G+S S+ Sbjct: 354 SGSSSSS 360
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 31.2 bits (69), Expect = 2.2 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = +1 Query: 280 HRLHG-GAHLLRAPERAPRPQVVG-----HRGRPLPARHLPHCARHRRQGL 414 HR HG H R+P AP PQ H P P +H+ H H+ Q L Sbjct: 385 HRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTL 435
>MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 308 Score = 30.4 bits (67), Expect = 3.7 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Frame = -2 Query: 196 GASDEPAGDVGGRGRRHPGEAVGDDGHVDER--DPFLLRERPAQQPHRHRQHGADHKQPH 23 GA DE A GG G PGE G G +P +QP + Q A+ Q Sbjct: 183 GAKDEAAAAAGGEGAAAPGEQAGGAGAEGAAGGEPREAEAAEPEQPEQPEQPAAEEPQAE 242 Query: 22 Q 20 + Sbjct: 243 E 243
>KRE1_YEAST (P17260) Protein KRE1 precursor| Length = 313 Score = 29.6 bits (65), Expect = 6.3 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 2/139 (1%) Frame = -3 Query: 432 SAQKTGQPLTTMPGAVGQVASGQWSTSV--PHHLRSWCAFWSAKKMSTPMKAVPASSAAD 259 S TG+ TT+P A ++SG + ++V + L + S+ ASS+ Sbjct: 99 STSSTGKTTTTVPTATSSLSSGLYLSTVTTTNDLGTTVTLTQTFTHSSTSATSSASSSVS 158 Query: 258 ST*LYFCHHPLRYXXXXXXXTVPVTSQLAMLVGVAGGIPAKP*EMTGTLTSAIHFFSGNA 79 S+ +V T+ V G P + T SA+ S ++ Sbjct: 159 SS----------VSSSGSSSSVKTTTSTGSAVAETGTRPDPSTDFTEPPVSAVTSLSIDS 208 Query: 78 RLSSHTGTGSTAPTTNSHT 22 ++ GT ST TT + T Sbjct: 209 YITITEGTTSTYTTTRAPT 227
>IRK10_RAT (P49655) ATP-sensitive inward rectifier potassium channel 10| (Potassium channel, inwardly rectifying subfamily J member 10) (ATP-sensitive inward rectifier potassium channel KAB-2) (Kir4.1) (BIR10) (Brain-specific inwardly rectifying K(+) chann Length = 379 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +2 Query: 215 FRYRKGWWQ-------KYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVDHCP 370 F Y K W +Y +L +A AGT F+ ++++ + AH DL G +H P Sbjct: 49 FLYLKDLWTTFIDMQWRYKLLLFSATFAGTWFLFGVVWYLVAVAHGDLLELGPPANHTP 107
>IRK10_MOUSE (Q9JM63) ATP-sensitive inward rectifier potassium channel 10| (Potassium channel, inwardly rectifying subfamily J member 10) (Inward rectifier K(+) channel Kir4.1) Length = 379 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +2 Query: 215 FRYRKGWWQ-------KYNYVLSAALDAGTAFMGVLIFFALQNAHHDLKWWGTEVDHCP 370 F Y K W +Y +L +A AGT F+ ++++ + AH DL G +H P Sbjct: 49 FLYLKDLWTTFIDMQWRYKLLLFSATFAGTWFLFGVVWYLVAVAHGDLLELGPPANHTP 107
>ZN500_HUMAN (O60304) Zinc finger protein 500| Length = 480 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 193 ASDEPAGDVGGRGRRHPGEAVGDDGHVDERDPFLLRERPAQQPHR 59 + DE +GG+ +H EA +D ++E F ++ PAQ HR Sbjct: 144 SDDEVPLGIGGQFLKHQAEAQPEDLSLEEEARFSSQQPPAQLSHR 188
>NARU_SALTY (P37593) Nitrite extrusion protein 2 (Nitrite facilitator 2)| Length = 462 Score = 29.6 bits (65), Expect = 6.3 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Frame = +2 Query: 41 GAVLPVPVWLLSRAFPEKKWIALVNV----PVISYGFAGMPPATPTNI 172 GA+L VP + F +KW L V P GFA PATP + Sbjct: 83 GAILRVPYSFMVPLFGGRKWTVLSTVILIIPCAWLGFAVQNPATPFGV 130
>YOPH_YEREN (P15273) Tyrosine-protein phosphatase yopH (EC 3.1.3.48) (Virulence| protein) Length = 468 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Frame = +1 Query: 232 VVAEVQLRAVGGARCRHRLHGGAHLLRAPERAPRPQVVGH---RGRPLPARHLPHCARHR 402 V+ E LR GAR H + +L AP R + H R PLP R PH + H Sbjct: 115 VLLEAALRQESGARGHVSSHSHS-VLHAPGTPVREGLRSHLDPRTPPLPPRERPHTSGHH 173 Query: 403 RQG 411 G Sbjct: 174 GAG 176
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +1 Query: 271 RCRHRLHGGAHLLRAPERAPRPQVVGHRGRPLPARHLPHCARHRRQGLP----GLLSTEL 438 R RHR ++ +P R P P+ R P R +P RHRR P S L Sbjct: 299 RRRHRSRSRSY---SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASL 355 Query: 439 AGASDSA 459 +G+S S+ Sbjct: 356 SGSSSSS 362
>PSAA_PROMM (Q7V510) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)| Length = 776 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 402 TMPGAVGQVASGQWSTSVPHHLRSWCAF 319 T G V V WST V HH +W F Sbjct: 292 TNNGGVNPVTGALWSTDVAHHHLAWAVF 319
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 29.3 bits (64), Expect = 8.2 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +1 Query: 271 RCRHRLHGGAHLLRAPERAPRPQVVGHRGRPLPARHLPHCARHRRQGLP----GLLSTEL 438 R RHR ++ +P R P P+ R P R +P RHRR P S L Sbjct: 299 RRRHRSRSRSY---SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASL 355 Query: 439 AGASDSA 459 +G+S S+ Sbjct: 356 SGSSSSS 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,804,971 Number of Sequences: 219361 Number of extensions: 1713023 Number of successful extensions: 5986 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5685 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5973 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
