ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19l22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472997.1| Oryza sativa (japonica cultivar-group), predic... 615 e-173
2dbj|AK060196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 6e-56
3dbj|AB108081.1| Phleum pratense DNA, SSR, microsatellite A01-D05 168 1e-38
4emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 163 7e-37
5emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4,... 163 7e-37
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 163 7e-37
7gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 76 1e-10
8ref|NM_128708.3| Arabidopsis thaliana ubiquitin-protein ligase/ ... 48 0.029
9emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16... 48 0.029
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12ref|NM_191096.1| Oryza sativa (japonica cultivar-group), predic... 44 0.46
13ref|XM_532349.2| PREDICTED: Canis familiaris similar to spermato... 44 0.46
14emb|BX510307.21| Zebrafish DNA sequence from clone DKEY-9F17 in ... 44 0.46
15gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete s... 44 0.46
16dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
17dbj|AK070254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
18dbj|AK066883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
19emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-19... 44 0.46
20emb|AL772210.8| Mouse DNA sequence from clone RP23-407G17 on chr... 44 0.46
21ref|XM_483571.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
22gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosom... 42 1.8
23ref|XM_385815.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 42 1.8
24emb|CR628336.1| Legionella pneumophila str. Paris complete genome 42 1.8
25gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85... 42 1.8
26gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, r... 42 1.8
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
28gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.8
29dbj|AK101429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
30emb|AJ544860.2|TSP544860 Thermotoga sp. RQ2 ORF1, ntpC gene, atp... 42 1.8
31gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17... 42 1.8
32gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
33gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complet... 42 1.8
34gb|AY489235.1| Bienertia cycloptera internal transcribed spacer ... 40 7.2
35ref|XM_493835.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
36ref|XM_640658.1| Dictyostelium discoideum hypothetical protein (... 40 7.2
37ref|XM_636564.1| Dictyostelium discoideum hypothetical protein (... 40 7.2
38gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, comp... 40 7.2
39gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delt... 40 7.2
40gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, co... 40 7.2
41gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
42ref|XM_849393.1| PREDICTED: Canis familiaris similar to CD9 anti... 40 7.2
43emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in... 40 7.2
44gb|AY181873.1| Bienertia cycloptera specimen-voucher Schuetze102... 40 7.2
45emb|AL672138.10| Human DNA sequence from clone RP13-313G19 on ch... 40 7.2
46gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 40 7.2
47emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in... 40 7.2
48gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.2
49gb|AC152929.2| Xenopus tropicalis clone ISB1-11B9, complete sequ... 40 7.2
50gb|AC159110.2| Pan troglodytes BAC clone CH251-533A11 from chrom... 40 7.2
51gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.2
52dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
54gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chrom... 40 7.2
55gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chrom... 40 7.2
56gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, comple... 40 7.2
57dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
58emb|BX640945.1|HSM807094 Homo sapiens mRNA; cDNA DKFZp686H20132 ... 40 7.2
59dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
60gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 7.2
61gb|AF139813.1|AF139813 Homo sapiens clone pDJ759j12 chromosome 1... 40 7.2
62gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone... 40 7.2
63emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate reg... 40 7.2
64dbj|AP006260.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.2
65dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.2
66gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromo... 40 7.2
67gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-3... 40 7.2
68gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 7.2
69ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 40 7.2 
>ref|XM_472997.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1770

 Score =  615 bits (310), Expect = e-173
 Identities = 475/530 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacatgcacgacgccaacgactcagcggacgacgacttctacagcggcggggaggctggg 60
           ||||||| |||||| |||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 16  gacatgctcgacgcgaacgactccgccgacgacgacttctacagcggcggggaggccggg 75

                                                                       
Query: 61  cttgccgccagcgatgacggcgacgccgactacgacttcgccgaccacgactctgacgac 120
           || | ||  ||||| ||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 76  ctcggcgggagcgacgacggggacgccgactacgacttcgccgaccacgactccgacgat 135

                                                                       
Query: 121 tcccccgagctcctctccctccggcagcagcaaaattactgcatattgagtgaagctggt 180
           ||| | ||||||||||| | ||||||||||||||||||| | ||||| |||||||| | |
Sbjct: 136 tccgcggagctcctctcgcaccggcagcagcaaaattacagtatattaagtgaagccgat 195

                                                                       
Query: 181 ataaagcagcgccaagaggatgacataaatagggtttcaactgttctttcaatttcaaag 240
           ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 196 atacaacagcgccaagaggatgatataaatagggtttcaactgttctttcaatttcaaag 255

                                                                       
Query: 241 tcggaagcatgtgctcttcttcgcagctataactggagtgttagtaaggtgcatgatgaa 300
           || |||||||||| ||||||||| |  |||||||||||||| ||||||||||||||||||
Sbjct: 256 tcagaagcatgtgttcttcttcgtaattataactggagtgtcagtaaggtgcatgatgaa 315

                                                                       
Query: 301 tggttcgttgatgaagaacgtgttcgcaaggttgttggttttccggagaagcgcattgaa 360
           ||||| | ||||||||||| |||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 316 tggtttgctgatgaagaacatgttcgtaaggttgttggttttccggaaaagctcatcgaa 375

                                                                       
Query: 361 atgccaaatgacagagaactggcatgtggaatttgttttgaaaattgccctcatgcatca 420
           |||||||||||||||||| || |||||||||||||||| |||||||| |||| | | |||
Sbjct: 376 atgccaaatgacagagaattgacatgtggaatttgtttcgaaaattgtcctcgtacgtca 435

                                                                       
Query: 421 atgagtgctgccgcatgtggacatcctttctgtagtgtatgctggagaggttacattagc 480
           ||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||| ||||||
Sbjct: 436 atgagtgctgctgcatgtggccatccgttctgtagtgcatgttggagaggttatattagc 495

                                                             
Query: 481 actgctataaatgatggtccaggatgtctgatgttgagatgtcctgatcc 530
           ||| ||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 496 acttctataaatgatggtccaggatgcttgatgttaagatgtcctgatcc 545
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>dbj|AK060196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-F04, full
           insert sequence
          Length = 1838

 Score =  226 bits (114), Expect = 6e-56
 Identities = 174/194 (89%)
 Strand = Plus / Plus

                                                                       
Query: 337 ggttttccggagaagcgcattgaaatgccaaatgacagagaactggcatgtggaatttgt 396
           ||||||||||| |||| ||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 1   ggttttccggaaaagctcatcgaaatgccaaatgacagagaattgacatgtggaatttgt 60

                                                                       
Query: 397 tttgaaaattgccctcatgcatcaatgagtgctgccgcatgtggacatcctttctgtagt 456
           || |||||||| |||| | | |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 61  ttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccatccgttctgtagt 120

                                                                       
Query: 457 gtatgctggagaggttacattagcactgctataaatgatggtccaggatgtctgatgttg 516
           | ||| ||||||||||| ||||||||| ||||||||||||||||||||||  ||||||| 
Sbjct: 121 gcatgttggagaggttatattagcacttctataaatgatggtccaggatgcttgatgtta 180

                         
Query: 517 agatgtcctgatcc 530
           ||||||||||||||
Sbjct: 181 agatgtcctgatcc 194
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>dbj|AB108081.1| Phleum pratense DNA, SSR, microsatellite A01-D05
          Length = 548

 Score =  168 bits (85), Expect = 1e-38
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                       
Query: 148 cagcaaaattactgcatattgagtgaagctggtataaagcagcgccaagaggatgacata 207
           ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 345 cagcaaagttactgcatattgagtgaagctggtataacgcagcaccaagaggatgacata 286

                                                                       
Query: 208 aatagggtttcaactgttctttcaatttcaaagtcggaagcatgtgctcttcttcgcagc 267
           ||||| ||| ||||||||||||| ||||| ||||| |||||||||||||| ||||| || 
Sbjct: 285 aatagagttgcaactgttctttccatttcgaagtcagaagcatgtgctctccttcgtaga 226

                    
Query: 268 tataactgg 276
           |||||||||
Sbjct: 225 tataactgg 217
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>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16,
              complete sequence
          Length = 146313

 Score =  163 bits (82), Expect = 7e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      gacatgcacgacgccaacgactcagcggacgacgacttctacagcggcggggaggctggg 60
              ||||||| |||||| |||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 116625 gacatgctcgacgcgaacgactccgccgacgacgacttctacagcggcggggaggccggg 116684

                                                                          
Query: 61     cttgccgccagcgatgacggcgacgccgactacgacttcgccgaccacgactctgacgac 120
              || | ||  ||||| ||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 116685 ctcggcgggagcgacgacggggacgccgactacgacttcgccgaccacgactccgacgat 116744

                                            
Query: 121    tcccccgagctcctctccctccggcagcag 150
              ||| | ||||||||||| | ||||||||||
Sbjct: 116745 tccgcggagctcctctcgcaccggcagcag 116774



 Score =  153 bits (77), Expect = 7e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                          
Query: 148    cagcaaaattactgcatattgagtgaagctggtataaagcagcgccaagaggatgacata 207
              |||||||||||| | ||||| |||||||| | |||| | ||||||||||||||||| |||
Sbjct: 119041 cagcaaaattacagtatattaagtgaagccgatatacaacagcgccaagaggatgatata 119100

                                                                          
Query: 208    aatagggtttcaactgttctttcaatttcaaagtcggaagcatgtgctcttcttcgcagc 267
              ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |  
Sbjct: 119101 aatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttcttcttcgtaat 119160

                       
Query: 268    tataactgg 276
              |||||||||
Sbjct: 119161 tataactgg 119169



 Score =  143 bits (72), Expect = 7e-31
 Identities = 96/104 (92%)
 Strand = Plus / Plus

                                                                          
Query: 275    ggagtgttagtaaggtgcatgatgaatggttcgttgatgaagaacgtgttcgcaaggttg 334
              ||||||| ||||||||||||||||||||||| | ||||||||||| |||||| |||||||
Sbjct: 119750 ggagtgtcagtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttg 119809

                                                          
Query: 335    ttggttttccggagaagcgcattgaaatgccaaatgacagagaa 378
              ||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 119810 ttggttttccggaaaagctcatcgaaatgccaaatgacagagaa 119853



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                          
Query: 383    catgtggaatttgttttgaaaattgccctcatgcatcaatgagtgctgccgcatgtggac 442
              |||||||||||||||| |||||||| |||| | | |||||||||||||| |||||||| |
Sbjct: 120191 catgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggcc 120250

                                            
Query: 443    atcctttctgtagtgtatgctggagaggtt 472
              |||| |||||||||| ||| ||||||||||
Sbjct: 120251 atccgttctgtagtgcatgttggagaggtt 120280



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                          
Query: 468    aggttacattagcactgctataaatgatggtccaggatgtctgatgttgagatgtcctga 527
              |||||| ||||||||| ||||||||||||||||||||||  ||||||| |||||||||||
Sbjct: 120366 aggttatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctga 120425

                 
Query: 528    tcc 530
              |||
Sbjct: 120426 tcc 120428
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>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30,
             complete sequence
          Length = 88547

 Score =  163 bits (82), Expect = 7e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     gacatgcacgacgccaacgactcagcggacgacgacttctacagcggcggggaggctggg 60
             ||||||| |||||| |||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 12139 gacatgctcgacgcgaacgactccgccgacgacgacttctacagcggcggggaggccggg 12198

                                                                         
Query: 61    cttgccgccagcgatgacggcgacgccgactacgacttcgccgaccacgactctgacgac 120
             || | ||  ||||| ||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 12199 ctcggcgggagcgacgacggggacgccgactacgacttcgccgaccacgactccgacgat 12258

                                           
Query: 121   tcccccgagctcctctccctccggcagcag 150
             ||| | ||||||||||| | ||||||||||
Sbjct: 12259 tccgcggagctcctctcgcaccggcagcag 12288



 Score =  153 bits (77), Expect = 7e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                         
Query: 148   cagcaaaattactgcatattgagtgaagctggtataaagcagcgccaagaggatgacata 207
             |||||||||||| | ||||| |||||||| | |||| | ||||||||||||||||| |||
Sbjct: 14555 cagcaaaattacagtatattaagtgaagccgatatacaacagcgccaagaggatgatata 14614

                                                                         
Query: 208   aatagggtttcaactgttctttcaatttcaaagtcggaagcatgtgctcttcttcgcagc 267
             ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |  
Sbjct: 14615 aatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttcttcttcgtaat 14674

                      
Query: 268   tataactgg 276
             |||||||||
Sbjct: 14675 tataactgg 14683



 Score =  143 bits (72), Expect = 7e-31
 Identities = 96/104 (92%)
 Strand = Plus / Plus

                                                                         
Query: 275   ggagtgttagtaaggtgcatgatgaatggttcgttgatgaagaacgtgttcgcaaggttg 334
             ||||||| ||||||||||||||||||||||| | ||||||||||| |||||| |||||||
Sbjct: 15264 ggagtgtcagtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttg 15323

                                                         
Query: 335   ttggttttccggagaagcgcattgaaatgccaaatgacagagaa 378
             ||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 15324 ttggttttccggaaaagctcatcgaaatgccaaatgacagagaa 15367



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                         
Query: 383   catgtggaatttgttttgaaaattgccctcatgcatcaatgagtgctgccgcatgtggac 442
             |||||||||||||||| |||||||| |||| | | |||||||||||||| |||||||| |
Sbjct: 15705 catgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggcc 15764

                                           
Query: 443   atcctttctgtagtgtatgctggagaggtt 472
             |||| |||||||||| ||| ||||||||||
Sbjct: 15765 atccgttctgtagtgcatgttggagaggtt 15794



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 468   aggttacattagcactgctataaatgatggtccaggatgtctgatgttgagatgtcctga 527
             |||||| ||||||||| ||||||||||||||||||||||  ||||||| |||||||||||
Sbjct: 15880 aggttatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctga 15939

                
Query: 528   tcc 530
             |||
Sbjct: 15940 tcc 15942
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  163 bits (82), Expect = 7e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        gacatgcacgacgccaacgactcagcggacgacgacttctacagcggcggggaggctggg 60
                ||||||| |||||| |||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 24556994 gacatgctcgacgcgaacgactccgccgacgacgacttctacagcggcggggaggccggg 24557053

                                                                            
Query: 61       cttgccgccagcgatgacggcgacgccgactacgacttcgccgaccacgactctgacgac 120
                || | ||  ||||| ||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 24557054 ctcggcgggagcgacgacggggacgccgactacgacttcgccgaccacgactccgacgat 24557113

                                              
Query: 121      tcccccgagctcctctccctccggcagcag 150
                ||| | ||||||||||| | ||||||||||
Sbjct: 24557114 tccgcggagctcctctcgcaccggcagcag 24557143



 Score =  153 bits (77), Expect = 7e-34
 Identities = 116/129 (89%)
 Strand = Plus / Plus

                                                                            
Query: 148      cagcaaaattactgcatattgagtgaagctggtataaagcagcgccaagaggatgacata 207
                |||||||||||| | ||||| |||||||| | |||| | ||||||||||||||||| |||
Sbjct: 24559410 cagcaaaattacagtatattaagtgaagccgatatacaacagcgccaagaggatgatata 24559469

                                                                            
Query: 208      aatagggtttcaactgttctttcaatttcaaagtcggaagcatgtgctcttcttcgcagc 267
                ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |  
Sbjct: 24559470 aatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttcttcttcgtaat 24559529

                         
Query: 268      tataactgg 276
                |||||||||
Sbjct: 24559530 tataactgg 24559538



 Score =  143 bits (72), Expect = 7e-31
 Identities = 96/104 (92%)
 Strand = Plus / Plus

                                                                            
Query: 275      ggagtgttagtaaggtgcatgatgaatggttcgttgatgaagaacgtgttcgcaaggttg 334
                ||||||| ||||||||||||||||||||||| | ||||||||||| |||||| |||||||
Sbjct: 24560119 ggagtgtcagtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttg 24560178

                                                            
Query: 335      ttggttttccggagaagcgcattgaaatgccaaatgacagagaa 378
                ||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 24560179 ttggttttccggaaaagctcatcgaaatgccaaatgacagagaa 24560222



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                            
Query: 383      catgtggaatttgttttgaaaattgccctcatgcatcaatgagtgctgccgcatgtggac 442
                |||||||||||||||| |||||||| |||| | | |||||||||||||| |||||||| |
Sbjct: 24560560 catgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggcc 24560619

                                              
Query: 443      atcctttctgtagtgtatgctggagaggtt 472
                |||| |||||||||| ||| ||||||||||
Sbjct: 24560620 atccgttctgtagtgcatgttggagaggtt 24560649



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 468      aggttacattagcactgctataaatgatggtccaggatgtctgatgttgagatgtcctga 527
                |||||| ||||||||| ||||||||||||||||||||||  ||||||| |||||||||||
Sbjct: 24560735 aggttatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctga 24560794

                   
Query: 528      tcc 530
                |||
Sbjct: 24560795 tcc 24560797
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>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 288   ggtgcatgatgaatggttcgttgatgaagaacgtgttcgcaaggttgttggttt 341
             |||||||||||||||||| |  ||||||||||||||||| ||||||||||||||
Sbjct: 26944 ggtgcatgatgaatggtttgcagatgaagaacgtgttcgaaaggttgttggttt 26997
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>ref|NM_128708.3| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
           AT2G31510 mRNA, complete cds
          Length = 1993

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 436 tgtggacatcctttctgtagtgtatgctggagaggttacattagcactgctataaatgat 495
           ||||| ||||||||||| | |  |||||||| |||||| || |||||  | || ||||||
Sbjct: 460 tgtggccatcctttctgcactacatgctggacaggttatatcagcacaaccattaatgat 519

                                           
Query: 496 ggtccaggatgtctgatgttgagatgtcctga 527
           || || |||||| ||||| | |||||||||||
Sbjct: 520 ggcccgggatgtttgatgctaagatgtcctga 551
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>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3,
            complete sequence
          Length = 126881

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 459  atgctggagaggttacattagcactgctataaatgatggtccaggatgtctgatgttgag 518
            |||||||||||| || ||| ||||  | || || |||||||| |||||  ||||| ||||
Sbjct: 4999 atgctggagaggatatattggcacctcaatcaacgatggtccgggatgcttgatgctgag 4940

                        
Query: 519  atgtcctgatcc 530
            ||||||||||||
Sbjct: 4939 atgtcctgatcc 4928



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 459   atgctggagaggttacattagcactgctataaatgatggtccaggatgtctgatgttgag 518
             ||||||| |||| || ||| ||||| | || || |||||||  |||||  ||||| ||||
Sbjct: 20120 atgctggggaggatatattggcacttcaatcaacgatggtctgggatgcttgatgctgag 20061

                         
Query: 519   atgtcctgatcc 530
             ||||||||||||
Sbjct: 20060 atgtcctgatcc 20049
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 30       cgacgacttctacagcggcggggaggc 56
                |||||||||||||||| ||||||||||
Sbjct: 21269383 cgacgacttctacagctgcggggaggc 21269409



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 127      gagctcctctccctccggcagc 148
                ||||||||||||||||||||||
Sbjct: 34862167 gagctcctctccctccggcagc 34862188
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>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1064G04
          Length = 186704

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 30     cgacgacttctacagcggcggggaggc 56
              |||||||||||||||| ||||||||||
Sbjct: 166892 cgacgacttctacagctgcggggaggc 166918
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>ref|NM_191096.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 127 gagctcctctccctccggcagc 148
           ||||||||||||||||||||||
Sbjct: 873 gagctcctctccctccggcagc 852
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>ref|XM_532349.2| PREDICTED: Canis familiaris similar to spermatogenesis and
           centriole associated 1 (LOC475119), mRNA
          Length = 1457

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 42  cagcggcggggaggctgggctt 63
           ||||||||||||||||||||||
Sbjct: 801 cagcggcggggaggctgggctt 822
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>emb|BX510307.21| Zebrafish DNA sequence from clone DKEY-9F17 in linkage group 5,
             complete sequence
          Length = 102019

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 270   taactggagtgttagtaaggtgcatgatga 299
             ||||||||||||  ||||||||||||||||
Sbjct: 12911 taactggagtgtgtgtaaggtgcatgatga 12940
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>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence
          Length = 142649

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 493   gatggtccaggatgtctgatgttgagatgtcctgatcc 530
             |||||||| |||||  ||||| ||||||||||||||||
Sbjct: 79240 gatggtcctggatgcttgatgctgagatgtcctgatcc 79203
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0454H12
          Length = 161004

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 127    gagctcctctccctccggcagc 148
              ||||||||||||||||||||||
Sbjct: 121339 gagctcctctccctccggcagc 121360
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>dbj|AK070254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043N09, full
            insert sequence
          Length = 1851

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 127  gagctcctctccctccggcagc 148
            ||||||||||||||||||||||
Sbjct: 1434 gagctcctctccctccggcagc 1413
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>dbj|AK066883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085B03, full
           insert sequence
          Length = 1042

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 127 gagctcctctccctccggcagc 148
           ||||||||||||||||||||||
Sbjct: 546 gagctcctctccctccggcagc 525
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>emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-198L24 on chromosome 4,
             complete sequence
          Length = 160432

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   tttcaactgttctttcaatttc 236
             ||||||||||||||||||||||
Sbjct: 92878 tttcaactgttctttcaatttc 92857
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>emb|AL772210.8| Mouse DNA sequence from clone RP23-407G17 on chromosome 4, complete
             sequence
          Length = 143653

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 385   tgtggaatttgttttgaaaatt 406
             ||||||||||||||||||||||
Sbjct: 79459 tgtggaatttgttttgaaaatt 79480
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>ref|XM_483571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2486

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 459 atgctggagaggttacattagcactgctataaatgatggtccaggatgt 507
           |||||||  |||||| |||||  |||| |||| ||||||||||||||||
Sbjct: 705 atgctgggaaggttatattagtgctgcaataagtgatggtccaggatgt 753
to top
>gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosome 8, complete sequence
          Length = 229851

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    ttgagtgaagctggtataaag 186
              |||||||||||||||||||||
Sbjct: 205772 ttgagtgaagctggtataaag 205752
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>ref|XM_385815.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05639.1)
            partial mRNA
          Length = 1425

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 497  gtccaggatgtctgatgttga 517
            |||||||||||||||||||||
Sbjct: 1072 gtccaggatgtctgatgttga 1052
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 394     tgttttgaaaattgccctcat 414
               |||||||||||||||||||||
Sbjct: 1564002 tgttttgaaaattgccctcat 1563982
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>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone
              BACR48A14, complete sequence
          Length = 188337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     gcgatgacggcgacgccgact 91
              |||||||||||||||||||||
Sbjct: 137833 gcgatgacggcgacgccgact 137853
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>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone
             BACR03F16, complete sequence
          Length = 204681

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    gcgatgacggcgacgccgact 91
             |||||||||||||||||||||
Sbjct: 54050 gcgatgacggcgacgccgact 54070
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 377      aactggcatgtggaatttgttttga 401
                |||||||||||||||||| ||||||
Sbjct: 11943554 aactggcatgtggaattttttttga 11943578
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 64      gccgccagcgatgacggcgacgccg 88
               |||||| ||||||||||||||||||
Sbjct: 1185806 gccgcccgcgatgacggcgacgccg 1185782
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>dbj|AK101429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038J15, full
           insert sequence
          Length = 2486

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 459 atgctggagaggttacattagcactgctataaatgatggtccaggatgt 507
           |||||||  |||||| |||||  |||| |||| ||||||||||||||||
Sbjct: 705 atgctgggaaggttatattagtgctgcaataagtgatggtccaggatgt 753
to top
>emb|AJ544860.2|TSP544860 Thermotoga sp. RQ2 ORF1, ntpC gene, atpI gene, atpE gene, ntpG gene,
             ntpE gene, ntpA gene, ntpB gene, ntpD gene, ORF2, ORF3 and
             ORF4 (partial)
          Length = 11736

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   ttcaactgttctttcaatttc 236
             |||||||||||||||||||||
Sbjct: 10329 ttcaactgttctttcaatttc 10309
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>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the
             complete sequence
          Length = 216994

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    gcgatgacggcgacgccgact 91
             |||||||||||||||||||||
Sbjct: 89697 gcgatgacggcgacgccgact 89677
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 377      aactggcatgtggaatttgttttga 401
                |||||||||||||||||| ||||||
Sbjct: 11972392 aactggcatgtggaattttttttga 11972416
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>gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complete sequence
          Length = 199454

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   ttgagtgaagctggtataaag 186
             |||||||||||||||||||||
Sbjct: 75706 ttgagtgaagctggtataaag 75686
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>gb|AY489235.1| Bienertia cycloptera internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 644

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 atgaagaacgtgttcgcaag 330
           ||||||||||||||||||||
Sbjct: 43  atgaagaacgtgttcgcaag 24
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>ref|XM_493835.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 504

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 122 cccccgagctcc-tctccctccggcagc 148
           |||||||||||| |||||||||||||||
Sbjct: 197 cccccgagctccatctccctccggcagc 170
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>ref|XM_640658.1| Dictyostelium discoideum hypothetical protein (DDB0216823), partial
           mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 tggaatttgttttgaaaatt 406
           ||||||||||||||||||||
Sbjct: 681 tggaatttgttttgaaaatt 662
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>ref|XM_636564.1| Dictyostelium discoideum hypothetical protein (DDB0218171), partial
           mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 tggaatttgttttgaaaatt 406
           ||||||||||||||||||||
Sbjct: 924 tggaatttgttttgaaaatt 905
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>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence
          Length = 244130

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   caaaattactgcatattgag 170
             ||||||||||||||||||||
Sbjct: 87787 caaaattactgcatattgag 87806
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>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to
             501670 (section 2 of 5) of the Complete Nucleotide
             Sequence
          Length = 251199

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   tttgttttgaaaattgccct 411
             ||||||||||||||||||||
Sbjct: 24641 tttgttttgaaaattgccct 24622
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>gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, complete sequence
          Length = 170533

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  atttgttttgaaaattgccc 410
            ||||||||||||||||||||
Sbjct: 3890 atttgttttgaaaattgccc 3909
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                           
Query: 122     cccccgagctcc-tctccctccggcagc 148
               |||||||||||| |||||||||||||||
Sbjct: 9640372 cccccgagctccatctccctccggcagc 9640345
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>ref|XM_849393.1| PREDICTED: Canis familiaris similar to CD9 antigen (p24) (Leukocyte
           antigen MIC3) (Motility-related protein) (MRP-1)
           (Tetraspanin-29) (Tspan-29) (LOC611695), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 384 atgtggaatttgttttgaaa 403
           ||||||||||||||||||||
Sbjct: 539 atgtggaatttgttttgaaa 520
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>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete
              sequence
          Length = 230648

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 271    aactggagtgttagtaaggtgcatgatg 298
              |||||| |||| ||||||||||||||||
Sbjct: 177735 aactggtgtgtgagtaaggtgcatgatg 177762
to top
>gb|AY181873.1| Bienertia cycloptera specimen-voucher Schuetze1027 internal
           transcribed spacer 1, 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, complete sequence
          Length = 643

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 atgaagaacgtgttcgcaag 330
           ||||||||||||||||||||
Sbjct: 43  atgaagaacgtgttcgcaag 24
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>emb|AL672138.10| Human DNA sequence from clone RP13-313G19 on chromosome X Contains the
             5' end of the OPHN1 gene for oligophrenin, a nudE nuclear
             distribution gene E homolog like 1 (NDEL1) pseudogene, the
             5' end of the gene for a novel protein (MGC21416) and two
             CpG islands, complete sequence
          Length = 174534

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   ttgttttgaaaattgccctc 412
             ||||||||||||||||||||
Sbjct: 82684 ttgttttgaaaattgccctc 82665
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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 122   cccccgagctcc-tctccctccggcagc 148
             |||||||||||| |||||||||||||||
Sbjct: 61271 cccccgagctccatctccctccggcagc 61244
to top
>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16,
             complete sequence
          Length = 132039

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ttgaaatgccaaatgacaga 375
             ||||||||||||||||||||
Sbjct: 85294 ttgaaatgccaaatgacaga 85275
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      atttgttttgaaaattgccc 410
                ||||||||||||||||||||
Sbjct: 13098078 atttgttttgaaaattgccc 13098097



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     atttgttttgaaaattgccc 410
               ||||||||||||||||||||
Sbjct: 4801374 atttgttttgaaaattgccc 4801355



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     atttgttttgaaaattgccc 410
               ||||||||||||||||||||
Sbjct: 1146058 atttgttttgaaaattgccc 1146039
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>gb|AC152929.2| Xenopus tropicalis clone ISB1-11B9, complete sequence
          Length = 68368

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   catcctttctgtagtgtatg 461
             ||||||||||||||||||||
Sbjct: 50558 catcctttctgtagtgtatg 50577
to top
>gb|AC159110.2| Pan troglodytes BAC clone CH251-533A11 from chromosome y, complete
              sequence
          Length = 174450

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    atttgttttgaaaattgccc 410
              ||||||||||||||||||||
Sbjct: 164901 atttgttttgaaaattgccc 164920
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      cggcgacgccgactacgact 97
               ||||||||||||||||||||
Sbjct: 2778572 cggcgacgccgactacgact 2778591
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 468      aggttacattagcactgctataaatgatggtccaggatgt 507
                |||||| |||||  |||| |||| ||||||||||||||||
Sbjct: 27042849 aggttatattagtgctgcaataagtgatggtccaggatgt 27042888
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                           
Query: 122     cccccgagctcc-tctccctccggcagc 148
               |||||||||||| |||||||||||||||
Sbjct: 9638493 cccccgagctccatctccctccggcagc 9638466
to top
>gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chromosome y, complete
              sequence
          Length = 175247

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    atttgttttgaaaattgccc 410
              ||||||||||||||||||||
Sbjct: 171356 atttgttttgaaaattgccc 171337
to top
>gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chromosome y, complete
             sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   atttgttttgaaaattgccc 410
             ||||||||||||||||||||
Sbjct: 75188 atttgttttgaaaattgccc 75169
to top
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence
          Length = 170801

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    cattagcactgctataaatg 493
              ||||||||||||||||||||
Sbjct: 161752 cattagcactgctataaatg 161771
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>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0666G10
          Length = 150761

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 468    aggttacattagcactgctataaatgatggtccaggatgt 507
              |||||| |||||  |||| |||| ||||||||||||||||
Sbjct: 144249 aggttatattagtgctgcaataagtgatggtccaggatgt 144288
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>emb|BX640945.1|HSM807094 Homo sapiens mRNA; cDNA DKFZp686H20132 (from clone DKFZp686H20132)
          Length = 8185

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 49   ggggaggctgggcttgccgccagc 72
            ||||||||||||||||| ||||||
Sbjct: 1900 ggggaggctgggcttgcagccagc 1877
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 468   aggttacattagcactgctataaatgatggtccaggatgt 507
             |||||| |||||  |||| |||| ||||||||||||||||
Sbjct: 13936 aggttatattagtgctgcaataagtgatggtccaggatgt 13975
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 449     tctgtagtgtatgctggaga 468
               ||||||||||||||||||||
Sbjct: 1412256 tctgtagtgtatgctggaga 1412275
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>gb|AF139813.1|AF139813 Homo sapiens clone pDJ759j12 chromosome 11 map 11q13, complete sequence
          Length = 142092

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     ggggaggctgggcttgccgccagc 72
              ||||||||||||||||| ||||||
Sbjct: 131596 ggggaggctgggcttgcagccagc 131619
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>gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone pDJ519o13 containing human
             gene for ferritin heavy chain (FTH), complete sequence
          Length = 196080

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    ggggaggctgggcttgccgccagc 72
             ||||||||||||||||| ||||||
Sbjct: 85202 ggggaggctgggcttgcagccagc 85179
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>emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 358K12 of
             library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 168571

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aaattactgcatattgagtg 172
             ||||||||||||||||||||
Sbjct: 76154 aaattactgcatattgagtg 76135
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>dbj|AP006260.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-61G16, complete
             sequence
          Length = 163024

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    ggggaggctgggcttgccgccagc 72
             ||||||||||||||||| ||||||
Sbjct: 18265 ggggaggctgggcttgcagccagc 18242
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>dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-467L20, complete
              sequence
          Length = 188788

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     ggggaggctgggcttgccgccagc 72
              ||||||||||||||||| ||||||
Sbjct: 177090 ggggaggctgggcttgcagccagc 177067
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>gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromosome y, complete
             sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   atttgttttgaaaattgccc 410
             ||||||||||||||||||||
Sbjct: 93056 atttgttttgaaaattgccc 93075
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>gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the
             hFEN1 gene, complete sequence
          Length = 185035

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    ggggaggctgggcttgccgccagc 72
             ||||||||||||||||| ||||||
Sbjct: 24279 ggggaggctgggcttgcagccagc 24302
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 388     ggaatttgttttgaaaattg 407
               ||||||||||||||||||||
Sbjct: 1587284 ggaatttgttttgaaaattg 1587303
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tttgttttgaaaattgccct 411
              ||||||||||||||||||||
Sbjct: 275112 tttgttttgaaaattgccct 275093


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,702,557
Number of Sequences: 3902068
Number of extensions: 4702557
Number of successful extensions: 92302
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 91719
Number of HSP's gapped (non-prelim): 593
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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