>FRAT1_MOUSE (P70339) Proto-oncogene FRAT1 (Frequently rearranged in advanced|
           T-cell lymphomas) (Frat-1)
          Length = 274

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +2

Query: 23  RELRLVRDGDAGVRAP-GAVRHVAGERRRQLRRSAD---AAAAYGEDLLPRQPQL 175
           R LR     + G  AP GAVR V GER R   RSA    A  + G   LP+QP L
Sbjct: 88  RLLRPTGSAETGNPAPPGAVRCVLGERGRVRGRSAPYCVAEISPGASALPQQPGL 142

>TIM54_ASHGO (Q758C9) Mitochondrial import inner membrane translocase subunit|
           TIM54
          Length = 472

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 71  GAVRHVAGERRRQLRRSADAAAAYGEDLLPRQPQLRHVRA 190
           G +RH   ER RQLRR   AA A  +  L  +  L  +R+
Sbjct: 135 GVIRHEVAERVRQLRRDIAAAEAAEQRALDEKRWLNRMRS 174

>GAT24_ARATH (Q5HZ36) GATA transcription factor 24|
          Length = 398

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
 Frame = +2

Query: 53  AGVRAPGAVRHVAGERRRQLRRSADAAAAYGED----------LLPRQPQLRHVRAQRQG 202
           +G R P ++ +  G R+R+ RR+A AAAA   D           LP + +L++ + +  G
Sbjct: 245 SGPRGPKSLCNACGIRQRKARRAAMAAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNG 304

Query: 203 G 205
           G
Sbjct: 305 G 305

>KCNQ1_RAT (Q9Z0N7) Potassium voltage-gated channel subfamily KQT member 1|
           (Voltage-gated potassium channel subunit Kv7.1) (IKs
           producing slow voltage-gated potassium channel alpha
           subunit KvLQT1) (KQT-like 1)
          Length = 669

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 54  PGYAPPVPYGMSQVNVDGNCGGRP-MPPQPTVKIYCRANPNYAMSVRNGKV 203
           PG APP+   +S V    + G RP +   P V IY    P  A +   G+V
Sbjct: 60  PGLAPPMSPPVSPVPAPADLGPRPRVSLDPRVSIYSTRRPLLARTHIQGRV 110

>YHO0_YEAST (P38800) Hypothetical 149.7 kDa protein in IRE1-KSP1 intergenic|
           region
          Length = 1345

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 127 IGRPPQLPSTFTCDMPYGTG 68
           IG+P  LP     D PYGTG
Sbjct: 718 IGKPEDLPMPLQTDTPYGTG 737

>VGLC_BHV1C (P14378) Glycoprotein GIII precursor|
          Length = 521

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = +3

Query: 48  ATPGYAPPV---PYGMSQVNVDG--NCGGRPMPPQPT 143
           +TP  APP    P G    + DG  + GGRP PP+P+
Sbjct: 94  STPPPAPPEDGRPGGAGNASRDGRPSGGGRPRPPRPS 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,684,032
Number of Sequences: 219361
Number of extensions: 414009
Number of successful extensions: 1534
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)