ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal19l10 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 322 bits (826), Expect = 3e-88 Identities = 159/160 (99%), Positives = 159/160 (99%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 234 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60 Query: 235 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 414 WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG Sbjct: 61 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120 Query: 415 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG Sbjct: 121 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 160
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 290 bits (741), Expect = 2e-78 Identities = 144/162 (88%), Positives = 151/162 (93%), Gaps = 2/162 (1%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 231 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59 Query: 232 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 408 +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM Sbjct: 60 DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119 Query: 409 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 GGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQG Sbjct: 120 GGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQG 161
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 253 bits (646), Expect = 2e-67 Identities = 129/166 (77%), Positives = 144/166 (86%), Gaps = 6/166 (3%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 222 MAAAFSSTVGAPASTPT +FLGKKL K QV++AV YHGKSS +N RF MAA+ +DE + Sbjct: 1 MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60 Query: 223 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 396 TD +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F Sbjct: 61 QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120 Query: 397 DNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 DN M GFYIA FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQG Sbjct: 121 DNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQG 166
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 244 bits (624), Expect = 8e-65 Identities = 125/164 (76%), Positives = 139/164 (84%), Gaps = 4/164 (2%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 228 MA+AFSSTVGAPASTPT FLGKK+K YHG + +R VMAA+ +D+ + T Sbjct: 1 MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54 Query: 229 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 402 D +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN Sbjct: 55 DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114 Query: 403 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 TM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQG Sbjct: 115 TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQG 158
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 202 bits (513), Expect = 6e-52 Identities = 102/155 (65%), Positives = 120/155 (77%) Frame = +1 Query: 70 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 249 S V APAST FLGKK V + + + K+N + A D++ + D+W+GLA Sbjct: 23 SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75 Query: 250 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 429 YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAP Sbjct: 76 YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135 Query: 430 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 AFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQG Sbjct: 136 AFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQG 170
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 200 bits (509), Expect = 2e-51 Identities = 101/157 (64%), Positives = 121/157 (77%), Gaps = 2/157 (1%) Frame = +1 Query: 70 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 243 SS+ P+ST FLG LKK VN +SK + ++ ++DE + TDK WKG Sbjct: 22 SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73 Query: 244 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 423 LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI Sbjct: 74 LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133 Query: 424 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQG Sbjct: 134 APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQG 170
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 199 bits (505), Expect = 5e-51 Identities = 102/171 (59%), Positives = 126/171 (73%), Gaps = 11/171 (6%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 204 MAAA+S TVGA P + G + + + + G S K + F ++A E Sbjct: 1 MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59 Query: 205 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 381 + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGL Sbjct: 60 ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119 Query: 382 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQG Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQG 170
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 199 bits (505), Expect = 5e-51 Identities = 102/171 (59%), Positives = 126/171 (73%), Gaps = 11/171 (6%) Frame = +1 Query: 55 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 204 MAAA+S TVGA P + G + + + + G S K + F ++A E Sbjct: 1 MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59 Query: 205 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 381 + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGL Sbjct: 60 ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119 Query: 382 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQG Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQG 170
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 194 bits (494), Expect = 1e-49 Identities = 103/170 (60%), Positives = 120/170 (70%), Gaps = 16/170 (9%) Frame = +1 Query: 73 STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 210 ST+GA TP T F GK LKK V+ ++K+ R V ++ Sbjct: 6 STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64 Query: 211 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 384 D K+ TD +WKGL D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124 Query: 385 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQG Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQG 174
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 192 bits (487), Expect = 6e-49 Identities = 98/161 (60%), Positives = 118/161 (73%), Gaps = 4/161 (2%) Frame = +1 Query: 64 AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 231 + +++V + T F GK LKK V+ NR +AAE + D K+ T D Sbjct: 17 SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73 Query: 232 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 411 +WKGL D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ Sbjct: 74 RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133 Query: 412 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQG Sbjct: 134 GFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQG 174
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 191 bits (484), Expect = 1e-48 Identities = 96/154 (62%), Positives = 121/154 (78%), Gaps = 3/154 (1%) Frame = +1 Query: 82 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 252 G AS P++ F G LKK ++S V + K + + V A + I+E + T D+W+GLAY Sbjct: 22 GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80 Query: 253 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 432 D+SDDQQDITRGKG+VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPA Sbjct: 81 DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140 Query: 433 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQG Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQG 174
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 189 bits (479), Expect = 5e-48 Identities = 99/151 (65%), Positives = 111/151 (73%), Gaps = 1/151 (0%) Frame = +1 Query: 85 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 261 A AS PT+ FLG LKK SS+ TV AAEN E++NTDKW LA D S Sbjct: 23 AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77 Query: 262 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 441 DDQ DI RGKG+VDSLFQAP GTH + SS+EY SQGLRKYD DN +G FYIAPAFMD Sbjct: 78 DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137 Query: 442 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 KLVVH++KNF+ LPNIKIPLILG+WGGKGQG Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQG 168
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 189 bits (479), Expect = 5e-48 Identities = 97/172 (56%), Positives = 118/172 (68%), Gaps = 14/172 (8%) Frame = +1 Query: 61 AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 198 AA ST+GA + P T F GK LKK V+ +NR + Sbjct: 2 AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58 Query: 199 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 378 A+ +DE + D+WKGL + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ Sbjct: 59 AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117 Query: 379 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 L+ Y DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQG Sbjct: 118 LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQG 169
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 188 bits (478), Expect = 7e-48 Identities = 101/154 (65%), Positives = 117/154 (75%), Gaps = 3/154 (1%) Frame = +1 Query: 82 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 252 GA AS PT+ F G LKK V S V + K + + V A + I+E + T D+WKGLAY Sbjct: 22 GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80 Query: 253 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 432 DISDDQQDITRGKG+VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPA Sbjct: 81 DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138 Query: 433 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQG Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQG 172
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 187 bits (475), Expect = 2e-47 Identities = 97/172 (56%), Positives = 118/172 (68%), Gaps = 14/172 (8%) Frame = +1 Query: 61 AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 198 AA ST+GA T N FLG +LK V+ +SK F ++A Sbjct: 2 AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55 Query: 199 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 378 ++ +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G Sbjct: 56 EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115 Query: 379 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 LR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQG Sbjct: 116 LRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQG 167
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 128 bits (321), Expect = 1e-29 Identities = 63/109 (57%), Positives = 80/109 (73%), Gaps = 3/109 (2%) Frame = +1 Query: 217 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 387 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 388 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQG Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQG 143
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 62.4 bits (150), Expect = 8e-10 Identities = 25/40 (62%), Positives = 34/40 (85%) Frame = +1 Query: 415 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+G Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEG 42
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 61.6 bits (148), Expect = 1e-09 Identities = 24/40 (60%), Positives = 34/40 (85%) Frame = +1 Query: 415 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+G Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEG 42
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 1.9 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -1 Query: 420 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 244 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -2 Query: 332 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 186 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +1 Query: 85 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 264 +PA+ P+ +G+K++ V+ ++ G K++ + + KR T ++ G + +SD Sbjct: 35 SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89 Query: 265 D--QQDITRGKGIVDSLFQAPTGDG 333 D ++ + R K +D + + T DG Sbjct: 90 DTIRRMVRRRKERIDIIMPSKTKDG 114
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 3.2 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 277 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 447 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 448 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 3.2 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -1 Query: 525 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 346 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 345 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 241 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 4.2 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 492 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 328 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 327 ARGRLEERVHDALPSGDVLLVVG 259 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 4.2 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 277 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 447 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 448 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 4.2 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 277 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 447 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 448 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 4.2 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 277 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 447 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 448 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 534 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 5.5 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +1 Query: 151 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 330 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 331 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 489 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 7.2 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 492 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 328 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISSPEALQNPVHLVIANILLAPLI 233 Query: 327 ARGRLEERVHDALPSGDVLLVVG 259 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 7.2 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -1 Query: 492 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 328 + +G H ++DN+ + ++S+ A+H + + P+AL + L+ A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISTPEALQNPVHLIIANILLAPLI 233 Query: 327 ARGRLEERVHDALPSGDVLLVVG 259 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 29.3 bits (64), Expect = 7.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 253 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 387 D S +D RGKG+ THEA LS +V++GL K Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239
>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107| Length = 1070 Score = 29.3 bits (64), Expect = 7.2 Identities = 14/53 (26%), Positives = 28/53 (52%) Frame = +1 Query: 163 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 321 K + + +++ E++ K++TDK+ L +SD+ I K V+S + P Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740
>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related| protein) (Fragment) Length = 255 Score = 29.3 bits (64), Expect = 7.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 31 QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 138 QG PS + + G+PA P+ FLGK +K V Sbjct: 52 QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 28.9 bits (63), Expect = 9.3 Identities = 23/83 (27%), Positives = 36/83 (43%) Frame = -1 Query: 501 EWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAEDGLVGAVAR 322 +W + G+G E +N L + S+ + S G + DV G E G V+ Sbjct: 83 DWAEEGGEGSVAVEETENSLESQDVSEGDESEG------DASEGDVSEGDES--EGDVSE 134 Query: 321 GRLEERVHDALPSGDVLLVVGDI 253 G + ER PS + L VG++ Sbjct: 135 GAVSERAEFPEPSEEAKLFVGNL 157
>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 421 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 220 RNTDKWKGLAYDISDDQQDITRGKGI 297 R+ K KG A++ISDD + + KGI Sbjct: 46 RDVKKHKGYAFEISDDLESVIEDKGI 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,743,292 Number of Sequences: 219361 Number of extensions: 1369428 Number of successful extensions: 5069 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5057 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
