| Clone Name | baal19k20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | XYLX_PSEPU (P23099) Toluate 1,2-dioxygenase alpha subunit (EC 1.... | 30 | 3.6 | 2 | TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein) | 29 | 8.1 | 3 | GAT6A_XENLA (Q91678) GATA-binding factor 6-A (Transcription fact... | 29 | 8.1 |
|---|
>XYLX_PSEPU (P23099) Toluate 1,2-dioxygenase alpha subunit (EC 1.14.12.-)| Length = 454 Score = 30.0 bits (66), Expect = 3.6 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 4 TRQKNG----WLYTCSFYSHRLCSLALFDEATSPCSFHGMT 114 TR K+G ++ CS LC ++AT CSFHG T Sbjct: 78 TRNKDGELNAFVNACSHRGATLCRFRSGNKATHTCSFHGWT 118
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +3 Query: 99 LPRHDGSALHRVKHPHAAPSLIPPKSGSAPKSNFS 203 L RH S LH + HP +P PK AP S Sbjct: 24 LRRHSASNLHALAHPVPSPGSCSPKFPGAPNGGGS 58
>GAT6A_XENLA (Q91678) GATA-binding factor 6-A (Transcription factor xGATA-6A)| Length = 391 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/40 (30%), Positives = 17/40 (42%) Frame = +1 Query: 205 AHTDNGHWLLHNNDKHDGLNEXXXXXXXXASPPSPDLHDG 324 AH+ N HW ++ N PPSP +H+G Sbjct: 58 AHSVNSHWSQATSESSSFNNSSPHTSSRYHYPPSPPMHNG 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,706,013 Number of Sequences: 219361 Number of extensions: 1644039 Number of successful extensions: 4914 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4611 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4909 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)