ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464252.1| Oryza sativa (japonica cultivar-group), mRNA 345 9e-92
2dbj|AK069128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 9e-92
3gb|BT024113.1| Zea mays clone EL01N0515B10 mRNA sequence 256 6e-65
4gb|AY107910.1| Zea mays PCO130814 mRNA sequence 204 2e-49
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
6dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
7dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
8gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, comp... 42 1.7
9gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complet... 42 1.7
10emb|AL159974.21| Human DNA sequence from clone RP11-255E21 on ch... 42 1.7
11gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.9
13gb|AC067941.7| Homo sapiens BAC clone RP11-815K3 from 7, complet... 40 6.9
14gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome... 40 6.9
15gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, comple... 40 6.9
16gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, comp... 40 6.9
17emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chr... 40 6.9
18gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
19emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chro... 40 6.9
20gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chrom... 40 6.9
21gb|AC121763.1| Genomic sequence for Glycine max (soybean), clone... 40 6.9
22gb|AF391290.1| Branchiostoma floridae cosmid MPMGc117C0475, part... 40 6.9
23gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.9
24gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 40 6.9
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
26dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 6.9
27gb|AC002527.1|AC002527 Human BAC clone GS1-180J5 from 7q11, comp... 40 6.9
28emb|CR847539.12| Zebrafish DNA sequence from clone DKEY-96K10 in... 40 6.9
29gb|AC007059.1|AC007059 Homo sapiens chromosome 19, cosmid R26549... 40 6.9
30gb|AC006128.1|AC006128 Homo sapiens chromosome 19, cosmid F20900... 40 6.9
31gb|AC145929.4| Gallus gallus BAC clone CH261-31A6 from chromosom... 40 6.9
32dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.9 
>ref|XM_464252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4275

 Score =  345 bits (174), Expect = 9e-92
 Identities = 422/504 (83%), Gaps = 3/504 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 65
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 2322 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 2380

                                                                        
Query: 66   tcatcctcttatgaaacgatattaactgaactttctactctcataagcgacgtcgatttg 125
              ||||||||||||||| ||  |  ||||||||||||| ||||| || ||| | ||||||
Sbjct: 2381 --atcctcttatgaaactattattgctgaactttctacgctcattagtgacatggatttg 2438

                                                                        
Query: 126  catatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaagatccgtt 185
            || ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |||| | 
Sbjct: 2439 cacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaatccatc 2498

                                                                        
Query: 186  aaaaatgttggtttagctgtgatacataaagttttgcctgaggcccttactttgatcagg 245
             ||||||||||| | || ||||   | || ||||||||  ||||||||| ||||||||||
Sbjct: 2499 caaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttgatcagg 2558

                                                                        
Query: 246  agtgctctgttgcaaggacaagcactacaggcgctccagaagttttttgctgcactggtg 305
            |||||||| |||||||| || ||||||||||| || ||||  ||||||||| ||||||| 
Sbjct: 2559 agtgctctcttgcaagggcaggcactacaggcactgcagagattttttgcttcactggtc 2618

                                                                        
Query: 306  cagtctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaacca 365
            ||||||||||||| ||||||||| ||||||||| | || |||||||| ||||| ||||||
Sbjct: 2619 cagtctgcaaatacaagctttgacactttgttggattctcttatttctactgctaaacca 2678

                                                                        
Query: 366  tcacagtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtg 425
            || |||||||| || ||| |||| || ||| | |  || |||||||||||||||||||||
Sbjct: 2679 tcgcagtcaggtggacttgccaaacaagcattgtcttccattgcacagtgtgttgctgtg 2738

                                                                        
Query: 426  ctatgcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcatc 485
             | |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| 
Sbjct: 2739 ttgtgcttagcagctggggatcagaagtgtgcctcaactattgaaatgcttaaaggcatt 2798

                                    
Query: 486  ctaaatgatgacagttctactaat 509
             |||| ||||||||  ||||||||
Sbjct: 2799 ttaaaagatgacagcactactaat 2822
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>dbj|AK069128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N20, full
            insert sequence
          Length = 4275

 Score =  345 bits (174), Expect = 9e-92
 Identities = 422/504 (83%), Gaps = 3/504 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 65
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 2322 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 2380

                                                                        
Query: 66   tcatcctcttatgaaacgatattaactgaactttctactctcataagcgacgtcgatttg 125
              ||||||||||||||| ||  |  ||||||||||||| ||||| || ||| | ||||||
Sbjct: 2381 --atcctcttatgaaactattattgctgaactttctacgctcattagtgacatggatttg 2438

                                                                        
Query: 126  catatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaagatccgtt 185
            || ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |||| | 
Sbjct: 2439 cacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaatccatc 2498

                                                                        
Query: 186  aaaaatgttggtttagctgtgatacataaagttttgcctgaggcccttactttgatcagg 245
             ||||||||||| | || ||||   | || ||||||||  ||||||||| ||||||||||
Sbjct: 2499 caaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttgatcagg 2558

                                                                        
Query: 246  agtgctctgttgcaaggacaagcactacaggcgctccagaagttttttgctgcactggtg 305
            |||||||| |||||||| || ||||||||||| || ||||  ||||||||| ||||||| 
Sbjct: 2559 agtgctctcttgcaagggcaggcactacaggcactgcagagattttttgcttcactggtc 2618

                                                                        
Query: 306  cagtctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaacca 365
            ||||||||||||| ||||||||| ||||||||| | || |||||||| ||||| ||||||
Sbjct: 2619 cagtctgcaaatacaagctttgacactttgttggattctcttatttctactgctaaacca 2678

                                                                        
Query: 366  tcacagtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtg 425
            || |||||||| || ||| |||| || ||| | |  || |||||||||||||||||||||
Sbjct: 2679 tcgcagtcaggtggacttgccaaacaagcattgtcttccattgcacagtgtgttgctgtg 2738

                                                                        
Query: 426  ctatgcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcatc 485
             | |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| 
Sbjct: 2739 ttgtgcttagcagctggggatcagaagtgtgcctcaactattgaaatgcttaaaggcatt 2798

                                    
Query: 486  ctaaatgatgacagttctactaat 509
             |||| ||||||||  ||||||||
Sbjct: 2799 ttaaaagatgacagcactactaat 2822
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>gb|BT024113.1| Zea mays clone EL01N0515B10 mRNA sequence
          Length = 1856

 Score =  256 bits (129), Expect = 6e-65
 Identities = 285/337 (84%)
 Strand = Plus / Plus

                                                                       
Query: 148 aactgtgttgcacaataatggtcgacagaagatccgttaaaaatgttggtttagctgtga 207
           |||| ||||||||||||||||| ||||||| |||  ||  ||| |||||||||||||| |
Sbjct: 11  aactttgttgcacaataatggttgacagaaaatctattctaaacgttggtttagctgtta 70

                                                                       
Query: 208 tacataaagttttgcctgaggcccttactttgatcaggagtgctctgttgcaaggacaag 267
            | |||||||||||||| ||||||||  ||||||||||||||| ||||||||||| || |
Sbjct: 71  gagataaagttttgcctcaggcccttgttttgatcaggagtgccctgttgcaagggcagg 130

                                                                       
Query: 268 cactacaggcgctccagaagttttttgctgcactggtgcagtctgcaaatataagctttg 327
           |||| ||||| || |||| |||||||||  |||| || || ||||||||||  |||||||
Sbjct: 131 cactgcaggctcttcagaggttttttgcatcacttgttcaatctgcaaatactagctttg 190

                                                                       
Query: 328 aaactttgttgaactcccttatttccactgccaaaccatcacagtcaggcggtctttcca 387
           |  |||||||| | |||||||||||  |||| || |||||||| |||||  ||||| | |
Sbjct: 191 atgctttgttggagtcccttatttctgctgctaagccatcacattcaggtagtcttgcta 250

                                                                       
Query: 388 agcaggcactattctctattgcacagtgtgttgctgtgctatgcttagcagctggtgata 447
           |||| ||||| |  ||||||||  ||||||||||||| ||||||||||||||||||||  
Sbjct: 251 agcaagcactgtcttctattgctaagtgtgttgctgttctatgcttagcagctggtgacc 310

                                                
Query: 448 agaagtgtgcatcaactattgaaatgcttaaaggcat 484
           ||||||||||||| || ||||||||||||||||||||
Sbjct: 311 agaagtgtgcatctacaattgaaatgcttaaaggcat 347
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>gb|AY107910.1| Zea mays PCO130814 mRNA sequence
          Length = 1777

 Score =  204 bits (103), Expect = 2e-49
 Identities = 249/295 (84%), Gaps = 2/295 (0%)
 Strand = Plus / Plus

                                                                       
Query: 192 gttggtttagctgtgatacataaagttttgcctgaggcccttactttgatcaggagtgct 251
           |||||||||||||| | | |||||||||||||| ||||||||  ||||||||||||||| 
Sbjct: 15  gttggtttagctgttagagataaagttttgcctcaggcccttgttttgatcaggagtgcc 74

                                                                       
Query: 252 ctgttgcaaggacaag-cactacagg-cgctccagaagttttttgctgcactggtgcagt 309
           ||||||||||| | || |||| |||| | || |||| |||||||||  |||| || || |
Sbjct: 75  ctgttgcaagggccaggcactgcagggctcttcagaggttttttgcatcacttgttcaat 134

                                                                       
Query: 310 ctgcaaatataagctttgaaactttgttgaactcccttatttccactgccaaaccatcac 369
           |||||||||  ||||||||  |||||||| | |||||||||||  |||| || |||||||
Sbjct: 135 ctgcaaatactagctttgatgctttgttggagtcccttatttctgctgctaagccatcac 194

                                                                       
Query: 370 agtcaggcggtctttccaagcaggcactattctctattgcacagtgtgttgctgtgctat 429
           | |||||  ||||| | ||||| ||||| |  ||||||||  ||||||||||||| ||||
Sbjct: 195 attcaggtagtcttgctaagcaagcactgtcttctattgctaagtgtgttgctgttctat 254

                                                                  
Query: 430 gcttagcagctggtgataagaagtgtgcatcaactattgaaatgcttaaaggcat 484
           ||||||||||||||||  ||||||||||||| || ||||||||||||||||||||
Sbjct: 255 gcttagcagctggtgaccagaagtgtgcatctacaattgaaatgcttaaaggcat 309
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                           
Query: 288     ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 347
               ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 3662420 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 3662361

                                                                           
Query: 348     atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 407
               ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 3662360 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 3662301

                                                                           
Query: 408     gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 467
               |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 3662300 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 3662241

                                                         
Query: 468     gaaatgcttaaaggcatcctaaatgatgacagttctactaat 509
               |||||||||||||||||  |||| ||||||||  ||||||||
Sbjct: 3662240 gaaatgcttaaaggcattttaaaagatgacagcactactaat 3662199



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 120     gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 179
               |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 3662666 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 3662607

                                                                           
Query: 180     tccgttaaaaatgttggtttagctgtgatacataaagttttgcctgaggcccttactttg 239
               ||| |  ||||||||||| | || ||||   | || ||||||||  ||||||||| ||||
Sbjct: 3662606 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 3662547

                                                    
Query: 240     atcaggagtgctctgttgcaaggacaagcactacagg 276
               |||||||||||||| |||||||| || ||||||||||
Sbjct: 3662546 atcaggagtgctctcttgcaagggcaggcactacagg 3662510



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                           
Query: 6       aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 65
               |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 3662851 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 3662793

                                                           
Query: 66      tcatcctcttatgaaacgatattaactgaactttctactctcat 109
                 ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 3662792 --atcctcttatgaaactattattgctgaactttctacgctcat 3662751
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0669G09
          Length = 140067

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                        
Query: 288  ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 347
            ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 2737 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 2678

                                                                        
Query: 348  atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 407
            ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 2677 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 2618

                                                                        
Query: 408  gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 467
            |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 2617 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 2558

                                                      
Query: 468  gaaatgcttaaaggcatcctaaatgatgacagttctactaat 509
            |||||||||||||||||  |||| ||||||||  ||||||||
Sbjct: 2557 gaaatgcttaaaggcattttaaaagatgacagcactactaat 2516



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 179
            |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 2983 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 2924

                                                                        
Query: 180  tccgttaaaaatgttggtttagctgtgatacataaagttttgcctgaggcccttactttg 239
            ||| |  ||||||||||| | || ||||   | || ||||||||  ||||||||| ||||
Sbjct: 2923 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 2864

                                                 
Query: 240  atcaggagtgctctgttgcaaggacaagcactacagg 276
            |||||||||||||| |||||||| || ||||||||||
Sbjct: 2863 atcaggagtgctctcttgcaagggcaggcactacagg 2827



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                        
Query: 6    aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 65
            |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 3168 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 3110

                                                        
Query: 66   tcatcctcttatgaaacgatattaactgaactttctactctcat 109
              ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 3109 --atcctcttatgaaactattattgctgaactttctacgctcat 3068
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score =  202 bits (102), Expect = 8e-49
 Identities = 192/222 (86%)
 Strand = Plus / Minus

                                                                          
Query: 288    ttttttgctgcactggtgcagtctgcaaatataagctttgaaactttgttgaactccctt 347
              ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| | || |||
Sbjct: 143710 ttttttgcttcactggtccagtctgcaaatacaagctttgacactttgttggattctctt 143651

                                                                          
Query: 348    atttccactgccaaaccatcacagtcaggcggtctttccaagcaggcactattctctatt 407
              ||||| ||||| |||||||| |||||||| || ||| |||| || ||| | |  || |||
Sbjct: 143650 atttctactgctaaaccatcgcagtcaggtggacttgccaaacaagcattgtcttccatt 143591

                                                                          
Query: 408    gcacagtgtgttgctgtgctatgcttagcagctggtgataagaagtgtgcatcaactatt 467
              |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||||||||
Sbjct: 143590 gcacagtgtgttgctgtgttgtgcttagcagctggggatcagaagtgtgcctcaactatt 143531

                                                        
Query: 468    gaaatgcttaaaggcatcctaaatgatgacagttctactaat 509
              |||||||||||||||||  |||| ||||||||  ||||||||
Sbjct: 143530 gaaatgcttaaaggcattttaaaagatgacagcactactaat 143489



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                          
Query: 120    gatttgcatatggccgctcttgcattggaactgtgttgcacaataatggtcgacagaaga 179
              |||||||| ||| | ||||||||  ||||||| |||||||| || |||||||| |||| |
Sbjct: 143956 gatttgcacatgactgctcttgcgctggaactttgttgcacgatcatggtcgatagaaaa 143897

                                                                          
Query: 180    tccgttaaaaatgttggtttagctgtgatacataaagttttgcctgaggcccttactttg 239
              ||| |  ||||||||||| | || ||||   | || ||||||||  ||||||||| ||||
Sbjct: 143896 tccatccaaaatgttggtcttgcagtgaggtacaaggttttgccccaggcccttattttg 143837

                                                   
Query: 240    atcaggagtgctctgttgcaaggacaagcactacagg 276
              |||||||||||||| |||||||| || ||||||||||
Sbjct: 143836 atcaggagtgctctcttgcaagggcaggcactacagg 143800



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 87/104 (83%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                          
Query: 6      aggcaggcaacattgggaaccctaaattctctggttgtcacatatgggagtcaaattggc 65
              |||||||| ||||||||||| ||||||||||| |||||  | |||||  |||||||||| 
Sbjct: 144141 aggcaggctacattgggaacactaaattctcttgttgttgcgtatggtggtcaaattgg- 144083

                                                          
Query: 66     tcatcctcttatgaaacgatattaactgaactttctactctcat 109
                ||||||||||||||| ||  |  ||||||||||||| |||||
Sbjct: 144082 --atcctcttatgaaactattattgctgaactttctacgctcat 144041
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>gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, complete sequence
          Length = 167484

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   aactttgttgaactcccttat 349
             |||||||||||||||||||||
Sbjct: 58371 aactttgttgaactcccttat 58351
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>gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complete sequence
          Length = 159044

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   aactttgttgaactcccttat 349
             |||||||||||||||||||||
Sbjct: 51954 aactttgttgaactcccttat 51934
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>emb|AL159974.21| Human DNA sequence from clone RP11-255E21 on chromosome 13 Contains the
             3' end of the C13orf10 gene for chromosome 13 open reading
             frame 10, complete sequence
          Length = 165326

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 340   actcccttatttccactgccaaacc 364
             ||||||||| |||||||||||||||
Sbjct: 75148 actcccttaattccactgccaaacc 75172
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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   taactgaactttctactctc 107
            ||||||||||||||||||||
Sbjct: 3300 taactgaactttctactctc 3319
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       taactgaactttctactctc 107
                ||||||||||||||||||||
Sbjct: 15741500 taactgaactttctactctc 15741519



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 200     agctgtgatacataaagttt 219
               ||||||||||||||||||||
Sbjct: 2202810 agctgtgatacataaagttt 2202829
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>gb|AC067941.7| Homo sapiens BAC clone RP11-815K3 from 7, complete sequence
          Length = 215994

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    cataaagttttgcctgaggc 229
              ||||||||||||||||||||
Sbjct: 178923 cataaagttttgcctgaggc 178942
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>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete
            sequence
          Length = 183076

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tttgttgaactcccttattt 351
            ||||||||||||||||||||
Sbjct: 9456 tttgttgaactcccttattt 9437
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>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    tgccaaaccatcacagtcag 375
              ||||||||||||||||||||
Sbjct: 203564 tgccaaaccatcacagtcag 203583
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>gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, complete sequence
          Length = 198097

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   tgccaaaccatcacagtcag 375
             ||||||||||||||||||||
Sbjct: 40826 tgccaaaccatcacagtcag 40845
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>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
             novel genes, the gene for a novel zinc finger protein
             (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 148816

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   tgaggcccttactttgatca 243
             ||||||||||||||||||||
Sbjct: 36960 tgaggcccttactttgatca 36941
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   agctgtgatacataaagttt 219
             ||||||||||||||||||||
Sbjct: 93104 agctgtgatacataaagttt 93123
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>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a
             pseudogene similar to part of ribosomal protein S2 (Rps2),
             a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7)
             (Mrps7) pseudogene, a pseudogene similar to part of a
             novel protein, a novel gene and a eukaryotic translation
             initiation factor pseudogene, complete sequence
          Length = 196006

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   aaagttttgcctgaggccct 232
             ||||||||||||||||||||
Sbjct: 46195 aaagttttgcctgaggccct 46176
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>gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chromosome 7, complete
             sequence
          Length = 162580

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   cataaagttttgcctgaggc 229
             ||||||||||||||||||||
Sbjct: 77475 cataaagttttgcctgaggc 77494
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>gb|AC121763.1| Genomic sequence for Glycine max (soybean), clone UMb001-26P13,
             complete sequence
          Length = 69692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     taggcaggcaacattgggaa 24
             ||||||||||||||||||||
Sbjct: 14974 taggcaggcaacattgggaa 14955
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>gb|AF391290.1| Branchiostoma floridae cosmid MPMGc117C0475, partial sequence
          Length = 47933

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  cacagtcaggcggtctttcc 386
            ||||||||||||||||||||
Sbjct: 9175 cacagtcaggcggtctttcc 9156
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>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    agctgtgatacataaagttt 219
              ||||||||||||||||||||
Sbjct: 123246 agctgtgatacataaagttt 123227
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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
              sequence
          Length = 178748

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     taactgaactttctactctc 107
              ||||||||||||||||||||
Sbjct: 151454 taactgaactttctactctc 151473
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       taactgaactttctactctc 107
                ||||||||||||||||||||
Sbjct: 15736034 taactgaactttctactctc 15736053



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 200     agctgtgatacataaagttt 219
               ||||||||||||||||||||
Sbjct: 2202822 agctgtgatacataaagttt 2202841
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 173    cagaagatccgttaaaaatgttgg 196
              ||||||||||| ||||||||||||
Sbjct: 986972 cagaagatccggtaaaaatgttgg 986995
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>gb|AC002527.1|AC002527 Human BAC clone GS1-180J5 from 7q11, complete sequence
          Length = 92651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   cataaagttttgcctgaggc 229
             ||||||||||||||||||||
Sbjct: 19982 cataaagttttgcctgaggc 19963
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>emb|CR847539.12| Zebrafish DNA sequence from clone DKEY-96K10 in linkage group 7,
             complete sequence
          Length = 104861

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ctggtgcagtctgcaaatat 319
             ||||||||||||||||||||
Sbjct: 59966 ctggtgcagtctgcaaatat 59985
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>gb|AC007059.1|AC007059 Homo sapiens chromosome 19, cosmid R26549, complete sequence
          Length = 32303

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   tggttgtcacatatgggagt 56
            ||||||||||||||||||||
Sbjct: 4740 tggttgtcacatatgggagt 4721
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>gb|AC006128.1|AC006128 Homo sapiens chromosome 19, cosmid F20900, complete sequence
          Length = 39852

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    tggttgtcacatatgggagt 56
             ||||||||||||||||||||
Sbjct: 26697 tggttgtcacatatgggagt 26678
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>gb|AC145929.4| Gallus gallus BAC clone CH261-31A6 from chromosome unknown, complete
             sequence
          Length = 172539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   gcactggtgcagtctgcaaa 316
             ||||||||||||||||||||
Sbjct: 50512 gcactggtgcagtctgcaaa 50493
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>dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1036E20, complete
              sequences
          Length = 190904

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 455    tgcatcaactattgaaatgcttaa 478
              ||||||||||||||||||| ||||
Sbjct: 133062 tgcatcaactattgaaatgattaa 133085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,524,566
Number of Sequences: 3902068
Number of extensions: 4524566
Number of successful extensions: 73658
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73445
Number of HSP's gapped (non-prelim): 192
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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