ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19k13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 6e-44
2dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 6e-44
3gb|AY106213.1| Zea mays PCO107956 mRNA sequence 174 6e-41
4ref|NM_193394.1| Oryza sativa (japonica cultivar-group), predic... 165 6e-38
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-35
6dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-35
7dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-35
8ref|NM_113023.3| Arabidopsis thaliana UBP7 (UBIQUITIN-SPECIFIC P... 54 2e-04
9emb|BX822226.1|CNS0A7SI Arabidopsis thaliana Full-length cDNA Co... 54 2e-04
10emb|BX824727.1|CNS0A6UW Arabidopsis thaliana Full-length cDNA Co... 54 2e-04
11gb|AF302661.1|AF302661 Arabidopsis thaliana ubiquitin-specific p... 54 2e-04
12gb|BT003992.1| Arabidopsis thaliana clone RAFL15-40-P05 (R20912)... 54 2e-04
13dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 54 2e-04
14dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 0.60
15gb|BT020530.1| Arabidopsis thaliana At3g17000 mRNA, complete cds 40 2.4
16ref|NM_112576.2| Arabidopsis thaliana ubiquitin conjugating enzy... 40 2.4
17gb|AF386935.1|AF386935 Arabidopsis thaliana Unknown protein (K14... 40 2.4
18emb|BX822676.1|CNS0A64H Arabidopsis thaliana Full-length cDNA Co... 40 2.4
19emb|BX823821.1|CNS0A5CS Arabidopsis thaliana Full-length cDNA Co... 40 2.4
20emb|BX825160.1|CNS0A54S Arabidopsis thaliana Full-length cDNA Co... 40 2.4
21dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 2.4
22gb|AC006961.16|AC006961 Homo sapiens chromosome 18, clone RP11-3... 40 2.4
23gb|DQ027045.1| Arabidopsis thaliana ubiquitinating enzyme (At3g1... 40 2.4
24gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, co... 38 9.3
25gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 9.3
26ref|XM_566529.1| Cryptococcus neoformans var. neoformans JEC21 R... 38 9.3
27ref|XM_802019.1| Trypanosoma cruzi strain CL Brener ubiquitin hy... 38 9.3
28ref|XM_803671.1| Trypanosoma cruzi strain CL Brener ubiquitin hy... 38 9.3
29ref|XM_797320.1| Trypanosoma cruzi strain CL Brener ubiquitin ca... 38 9.3
30ref|XM_851194.1| PREDICTED: Canis familiaris similar to Ubiquiti... 38 9.3
31ref|XM_851155.1| PREDICTED: Canis familiaris similar to Ubiquiti... 38 9.3
32ref|XM_851114.1| PREDICTED: Canis familiaris similar to Ubiquiti... 38 9.3
33ref|XM_851067.1| PREDICTED: Canis familiaris similar to Ubiquiti... 38 9.3
34ref|XM_537306.2| PREDICTED: Canis familiaris similar to Ubiquiti... 38 9.3
35emb|AL845433.4| Human DNA sequence from clone RP11-674N8 on chro... 38 9.3
36emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 38 9.3
37emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 38 9.3
38emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 38 9.3
39gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 38 9.3
40emb|AL928579.6| Mouse DNA sequence from clone RP23-302M15 on chr... 38 9.3
41emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 i... 38 9.3
42gb|AC104506.2| Homo sapiens chromosome 1 clone RP4-549L20, compl... 38 9.3
43gb|AC011357.5| Homo sapiens chromosome 5 clone CTC-362D12, compl... 38 9.3
44gb|AC011386.6| Homo sapiens chromosome 5 clone CTB-15P5, complet... 38 9.3
45gb|AC091937.2| Homo sapiens chromosome 5 clone RP11-327L20, comp... 38 9.3
46gb|AC091895.2| Homo sapiens chromosome 5 clone RP11-143A12, comp... 38 9.3
47dbj|AB041735.1| Moritella japonica genes for CadB, lysine decarb... 38 9.3
48dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 9.3
49gb|AE001439.1| Helicobacter pylori J99, complete genome 38 9.3
50gb|AC110565.7| Mus musculus chromosome 5, clone RP23-297N19, com... 38 9.3
51gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, co... 38 9.3
52emb|BX005345.12| Mouse DNA sequence from clone RP23-344C21 on ch... 38 9.3
53gb|AE000511.1| Helicobacter pylori 26695, complete genome 38 9.3
54gb|L37420.1|RABTRNAGT Oryctolagus cuniculus (clone R43) tRNA-gua... 38 9.3
55emb|AL731854.18| Mouse DNA sequence from clone RP23-120A20 on ch... 38 9.3 
>dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056M18, full
           insert sequence
          Length = 1835

 Score =  184 bits (93), Expect = 6e-44
 Identities = 160/181 (88%), Gaps = 1/181 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgccgccgattcgncagccatgctgacggtatgcataaaatggcagaagcaggtctttc 60
           |||||||||||||| ||||||||| ||| ||| || | |||||||||||| ||  ||| |
Sbjct: 112 gcgccgccgattcg-cagccatgccgaccgtaagcgtgaaatggcagaaggagaccttcc 170

                                                                       
Query: 61  caggcatagagattgatactagccagccgcctgtggttttcaagacccagttgtacacac 120
           ||||||||||||| || || |||||||||||||| || || ||||||||| | ||||| |
Sbjct: 171 caggcatagagatagacaccagccagccgcctgttgtctttaagacccagctatacactc 230

                                                                       
Query: 121 tgactggtgtaccccctgaacggcaaaaaattatggtgaagggtggaatattgaaggatg 180
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tgactggtgtaccacctgaaaggcaaaaaattatggtgaagggtggaatattgaaggatg 290

            
Query: 181 a 181
           |
Sbjct: 291 a 291
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>dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F09, full
           insert sequence
          Length = 1629

 Score =  184 bits (93), Expect = 6e-44
 Identities = 160/181 (88%), Gaps = 1/181 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgccgccgattcgncagccatgctgacggtatgcataaaatggcagaagcaggtctttc 60
           |||||||||||||| ||||||||| ||| ||| || | |||||||||||| ||  ||| |
Sbjct: 39  gcgccgccgattcg-cagccatgccgaccgtaagcgtgaaatggcagaaggagaccttcc 97

                                                                       
Query: 61  caggcatagagattgatactagccagccgcctgtggttttcaagacccagttgtacacac 120
           ||||||||||||| || || |||||||||||||| || || ||||||||| | ||||| |
Sbjct: 98  caggcatagagatagacaccagccagccgcctgttgtctttaagacccagctatacactc 157

                                                                       
Query: 121 tgactggtgtaccccctgaacggcaaaaaattatggtgaagggtggaatattgaaggatg 180
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgactggtgtaccacctgaaaggcaaaaaattatggtgaagggtggaatattgaaggatg 217

            
Query: 181 a 181
           |
Sbjct: 218 a 218
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>gb|AY106213.1| Zea mays PCO107956 mRNA sequence
          Length = 1770

 Score =  174 bits (88), Expect = 6e-41
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                       
Query: 39  aaatggcagaagcaggtctttccaggcatagagattgatactagccagccgcctgtggtt 98
           |||||||||||| || |||||||||||||||||||||| ||||||||||| ||  | |||
Sbjct: 79  aaatggcagaaggagctctttccaggcatagagattgacactagccagcctccgattgtt 138

                                                                       
Query: 99  ttcaagacccagttgtacacactgactggtgtaccccctgaacggcaaaaaattatggtg 158
           |||||||| |||||||||||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 139 ttcaagactcagttgtacacactaactggtgtgccacctgaacgccaaaaaattatggtg 198

                               
Query: 159 aagggtggaatattgaagga 178
           ||||| ||||||||||||||
Sbjct: 199 aagggaggaatattgaagga 218
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>ref|NM_193394.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1512

 Score =  165 bits (83), Expect = 6e-38
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                       
Query: 39  aaatggcagaagcaggtctttccaggcatagagattgatactagccagccgcctgtggtt 98
           |||||||||||| ||  ||| |||||||||||||| || || |||||||||||||| || 
Sbjct: 193 aaatggcagaaggagaccttcccaggcatagagatagacaccagccagccgcctgttgtc 252

                                                                       
Query: 99  ttcaagacccagttgtacacactgactggtgtaccccctgaacggcaaaaaattatggtg 158
           || ||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 253 tttaagacccagctatacactctgactggtgtaccacctgaaaggcaaaaaattatggtg 312

                                  
Query: 159 aagggtggaatattgaaggatga 181
           |||||||||||||||||||||||
Sbjct: 313 aagggtggaatattgaaggatga 335
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 1e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                            
Query: 39       aaatggcagaagcaggtctttccaggcatagagattgatactagccagccgcctgtggtt 98
                |||||||||||| ||  ||| |||||||||||||| || || |||||||||||||| || 
Sbjct: 20583706 aaatggcagaaggagaccttcccaggcatagagatagacaccagccagccgcctgttgtc 20583647

                                                                            
Query: 99       ttcaagacccagttgtacacactgactggtgtaccccctgaacggcaaaaaattatggtg 158
                || ||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 20583646 tttaagacccagctatacactctgactggtgtaccacctgaaaggcaaaaaattatggtg 20583587

                                   
Query: 159      aagggtggaatattgaagg 177
                |||||||||||||||||||
Sbjct: 20583586 aagggtggaatattgaagg 20583568
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score =  157 bits (79), Expect = 1e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                         
Query: 39    aaatggcagaagcaggtctttccaggcatagagattgatactagccagccgcctgtggtt 98
             |||||||||||| ||  ||| |||||||||||||| || || |||||||||||||| || 
Sbjct: 45682 aaatggcagaaggagaccttcccaggcatagagatagacaccagccagccgcctgttgtc 45623

                                                                         
Query: 99    ttcaagacccagttgtacacactgactggtgtaccccctgaacggcaaaaaattatggtg 158
             || ||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 45622 tttaagacccagctatacactctgactggtgtaccacctgaaaggcaaaaaattatggtg 45563

                                
Query: 159   aagggtggaatattgaagg 177
             |||||||||||||||||||
Sbjct: 45562 aagggtggaatattgaagg 45544
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>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score =  157 bits (79), Expect = 1e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                          
Query: 39     aaatggcagaagcaggtctttccaggcatagagattgatactagccagccgcctgtggtt 98
              |||||||||||| ||  ||| |||||||||||||| || || |||||||||||||| || 
Sbjct: 107528 aaatggcagaaggagaccttcccaggcatagagatagacaccagccagccgcctgttgtc 107469

                                                                          
Query: 99     ttcaagacccagttgtacacactgactggtgtaccccctgaacggcaaaaaattatggtg 158
              || ||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 107468 tttaagacccagctatacactctgactggtgtaccacctgaaaggcaaaaaattatggtg 107409

                                 
Query: 159    aagggtggaatattgaagg 177
              |||||||||||||||||||
Sbjct: 107408 aagggtggaatattgaagg 107390
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>ref|NM_113023.3| Arabidopsis thaliana UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7);
           cysteine-type endopeptidase/ ubiquitin thiolesterase/
           ubiquitin-specific protease AT3G21280 (UBP7) mRNA,
           complete cds
          Length = 1811

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 69  gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
           |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 247 gagattgatactagccagcctccttttgttttcaaggctcagttgta 293
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>emb|BX822226.1|CNS0A7SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZA01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1357

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 69  gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
           |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 103 gagattgatactagccagcctccttttgttttcaaggctcagttgta 149
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>emb|BX824727.1|CNS0A6UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH68ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1809

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 69  gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
           |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 248 gagattgatactagccagcctccttttgttttcaaggctcagttgta 294
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>gb|AF302661.1|AF302661 Arabidopsis thaliana ubiquitin-specific protease 7 (UBP7) gene,
           complete cds
          Length = 1587

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 69  gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
           |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 124 gagattgatactagccagcctccttttgttttcaaggctcagttgta 170
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>gb|BT003992.1| Arabidopsis thaliana clone RAFL15-40-P05 (R20912) putative
           ubiquitin-specific protease 7 (UBP7) (At3g21280) mRNA,
           complete cds
          Length = 1685

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 69  gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
           |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 123 gagattgatactagccagcctccttttgttttcaaggctcagttgta 169
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>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
          Length = 85599

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 69    gagattgatactagccagccgcctgtggttttcaagacccagttgta 115
             |||||||||||||||||||| ||| | ||||||||| | ||||||||
Sbjct: 63363 gagattgatactagccagcctccttttgttttcaaggctcagttgta 63317
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     tatgcataaaatggcagaagc 51
              |||||||||||||||||||||
Sbjct: 137451 tatgcataaaatggcagaagc 137471
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>gb|BT020530.1| Arabidopsis thaliana At3g17000 mRNA, complete cds
          Length = 930

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 466 cctgaacggcaaaaaattat 485
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>ref|NM_112576.2| Arabidopsis thaliana ubiquitin conjugating enzyme AT3G17000 mRNA,
           complete cds
          Length = 1263

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 583 cctgaacggcaaaaaattat 602
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>gb|AF386935.1|AF386935 Arabidopsis thaliana Unknown protein (K14A17.7) mRNA, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 582 cctgaacggcaaaaaattat 601
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>emb|BX822676.1|CNS0A64H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 515 cctgaacggcaaaaaattat 534
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>emb|BX823821.1|CNS0A5CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS7ZD11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1128

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 528 cctgaacggcaaaaaattat 547
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>emb|BX825160.1|CNS0A54S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL17ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1195

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 547 cctgaacggcaaaaaattat 566
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>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17
          Length = 92620

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   cctgaacggcaaaaaattat 154
             ||||||||||||||||||||
Sbjct: 30286 cctgaacggcaaaaaattat 30305
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>gb|AC006961.16|AC006961 Homo sapiens chromosome 18, clone RP11-31P16, complete sequence
          Length = 171419

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   tctttccaggcatagagatt 74
            ||||||||||||||||||||
Sbjct: 3290 tctttccaggcatagagatt 3309
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>gb|DQ027045.1| Arabidopsis thaliana ubiquitinating enzyme (At3g17000) mRNA,
           complete cds
          Length = 822

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 cctgaacggcaaaaaattat 154
           ||||||||||||||||||||
Sbjct: 466 cctgaacggcaaaaaattat 485
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>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence
          Length = 214638

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 118   cactgactggtgtaccccctgaa 140
             |||||||||||| ||||||||||
Sbjct: 35693 cactgactggtgaaccccctgaa 35671
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 100    tcaagacccagttgtacac 118
              |||||||||||||||||||
Sbjct: 276462 tcaagacccagttgtacac 276444
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>ref|XM_566529.1| Cryptococcus neoformans var. neoformans JEC21 RVB1 (CNA00990) partial
            mRNA
          Length = 1515

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 100  tcaagacccagttgtacac 118
            |||||||||||||||||||
Sbjct: 1181 tcaagacccagttgtacac 1199
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>ref|XM_802019.1| Trypanosoma cruzi strain CL Brener ubiquitin hydrolase
           (Tc00.1047053504443.10) partial mRNA
          Length = 1395

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 138 gaacggcaaaaaattatgg 156
           |||||||||||||||||||
Sbjct: 115 gaacggcaaaaaattatgg 133
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>ref|XM_803671.1| Trypanosoma cruzi strain CL Brener ubiquitin hydrolase
           (Tc00.1047053506569.10) partial mRNA
          Length = 1395

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 138 gaacggcaaaaaattatgg 156
           |||||||||||||||||||
Sbjct: 115 gaacggcaaaaaattatgg 133
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>ref|XM_797320.1| Trypanosoma cruzi strain CL Brener ubiquitin carboxyl-terminal
           hydrolase (Tc00.1047053509953.9) partial mRNA
          Length = 623

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 138 gaacggcaaaaaattatgg 156
           |||||||||||||||||||
Sbjct: 262 gaacggcaaaaaattatgg 280
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>ref|XM_851194.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
           hydrolase 14 (Ubiquitin thiolesterase 14)
           (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14), transcript variant 7
           (LOC480182), mRNA
          Length = 2284

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 338 ttatggtgaaaggaggaacattgaaggatga 368
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>ref|XM_851155.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
           hydrolase 14 (Ubiquitin thiolesterase 14)
           (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14), transcript variant 6
           (LOC480182), mRNA
          Length = 2272

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 338 ttatggtgaaaggaggaacattgaaggatga 368
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>ref|XM_851114.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
           hydrolase 14 (Ubiquitin thiolesterase 14)
           (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14), transcript variant 5
           (LOC480182), mRNA
          Length = 2281

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 338 ttatggtgaaaggaggaacattgaaggatga 368
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>ref|XM_851067.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
           hydrolase 14 (Ubiquitin thiolesterase 14)
           (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14), transcript variant 4
           (LOC480182), mRNA
          Length = 2260

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 338 ttatggtgaaaggaggaacattgaaggatga 368
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>ref|XM_537306.2| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
           hydrolase 14 (Ubiquitin thiolesterase 14)
           (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14), transcript variant 2
           (LOC480182), mRNA
          Length = 3590

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 338 ttatggtgaaaggaggaacattgaaggatga 368
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>emb|AL845433.4| Human DNA sequence from clone RP11-674N8 on chromosome X Contains a
              chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5)
              pseudogene, the 5' end of the NHS gene for Nance-Horan
              syndrome (congenital cataracts and dental anomalies) and
              two CpG islands, complete sequence
          Length = 200476

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 144    caaaaaattatggtgaagg 162
              |||||||||||||||||||
Sbjct: 178417 caaaaaattatggtgaagg 178399
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 43     ggcagaagcaggtctttccaggc 65
              ||||| |||||||||||||||||
Sbjct: 296924 ggcagcagcaggtctttccaggc 296946
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 43     ggcagaagcaggtctttccaggc 65
              ||||| |||||||||||||||||
Sbjct: 194140 ggcagcagcaggtctttccaggc 194162
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>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 95    ggttttcaagacccagttgtacacact 121
             ||||||||||| |||||||||| ||||
Sbjct: 51259 ggttttcaagagccagttgtacgcact 51285
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 155    ggtgaagggtggaatattgaagg 177
              |||||||||||||| ||||||||
Sbjct: 178690 ggtgaagggtggaaaattgaagg 178712
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>emb|AL928579.6| Mouse DNA sequence from clone RP23-302M15 on chromosome 4, complete
             sequence
          Length = 184057

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 106   cccagttgtacacactgactggt 128
             |||||||||| ||||||||||||
Sbjct: 18458 cccagttgtaaacactgactggt 18436
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>emb|BX950225.10| Zebrafish DNA sequence from clone CH211-173B8 in linkage group 19,
             complete sequence
          Length = 105707

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 143   gcaaaaaattatggtgaag 161
             |||||||||||||||||||
Sbjct: 45811 gcaaaaaattatggtgaag 45829
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>gb|AC104506.2| Homo sapiens chromosome 1 clone RP4-549L20, complete sequence
          Length = 131769

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    atgcataaaatggcagaag 50
             |||||||||||||||||||
Sbjct: 33514 atgcataaaatggcagaag 33532
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>gb|AC011357.5| Homo sapiens chromosome 5 clone CTC-362D12, complete sequence
          Length = 138533

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 146   aaaaattatggtgaagggt 164
             |||||||||||||||||||
Sbjct: 88200 aaaaattatggtgaagggt 88218
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>gb|AC011386.6| Homo sapiens chromosome 5 clone CTB-15P5, complete sequence
          Length = 192530

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 146    aaaaattatggtgaagggt 164
              |||||||||||||||||||
Sbjct: 162900 aaaaattatggtgaagggt 162882
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>gb|AC091937.2| Homo sapiens chromosome 5 clone RP11-327L20, complete sequence
          Length = 119906

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 163   gtggaatattgaaggatga 181
             |||||||||||||||||||
Sbjct: 33375 gtggaatattgaaggatga 33393
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>gb|AC091895.2| Homo sapiens chromosome 5 clone RP11-143A12, complete sequence
          Length = 127329

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 163   gtggaatattgaaggatga 181
             |||||||||||||||||||
Sbjct: 23089 gtggaatattgaaggatga 23071
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>dbj|AB041735.1| Moritella japonica genes for CadB, lysine decarboxylase, complete cds
          Length = 4367

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 61   caggcatagagattgatac 79
            |||||||||||||||||||
Sbjct: 2494 caggcatagagattgatac 2476
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 43      ggcagaagcaggtctttcc 61
               |||||||||||||||||||
Sbjct: 1082489 ggcagaagcaggtctttcc 1082507
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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 33      tgcataaaatggcagaagc 51
               |||||||||||||||||||
Sbjct: 1245797 tgcataaaatggcagaagc 1245779
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>gb|AC110565.7| Mus musculus chromosome 5, clone RP23-297N19, complete sequence
          Length = 194214

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 118    cactgactggtgtaccccctgaa 140
              |||||||||||| ||||||||||
Sbjct: 169948 cactgactggtgaaccccctgaa 169926
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>gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, complete sequence
          Length = 146712

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 106   cccagttgtacacactgactggt 128
             |||||||||| ||||||||||||
Sbjct: 73994 cccagttgtaaacactgactggt 73972
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>emb|BX005345.12| Mouse DNA sequence from clone RP23-344C21 on chromosome X, complete
            sequence
          Length = 208344

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 106  cccagttgtacacactgactggt 128
            |||||||||| ||||||||||||
Sbjct: 3624 cccagttgtaaacactgactggt 3646
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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 33      tgcataaaatggcagaagc 51
               |||||||||||||||||||
Sbjct: 1267447 tgcataaaatggcagaagc 1267429
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>gb|L37420.1|RABTRNAGT Oryctolagus cuniculus (clone R43) tRNA-guanine transglycosylase,
           complete cds
          Length = 1731

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 151 ttatggtgaagggtggaatattgaaggatga 181
           |||||||||| || |||| ||||||||||||
Sbjct: 239 ttatggtgaaaggaggaacattgaaggatga 269
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>emb|AL731854.18| Mouse DNA sequence from clone RP23-120A20 on chromosome 2, complete
             sequence
          Length = 208762

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 166   gaatattgaaggatgacac 184
             |||||||||||||||||||
Sbjct: 82842 gaatattgaaggatgacac 82824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,611,978
Number of Sequences: 3902068
Number of extensions: 1611978
Number of successful extensions: 101678
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101472
Number of HSP's gapped (non-prelim): 204
length of query: 189
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 167
effective length of database: 17,147,199,772
effective search space: 2863582361924
effective search space used: 2863582361924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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