| Clone Name | baal19k11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence Length = 1415 Score = 1174 bits (592), Expect = 0.0 Identities = 641/656 (97%), Gaps = 1/656 (0%) Strand = Plus / Plus Query: 3 aaacttttagcagctcaagnaatatgcagtttcacagggtttgacagcgcctaggaatgt 62 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 567 aaacttttagcagctcaag-aatatgcagtctcacagggtttgacagcgcctaggaatgt 625 Query: 63 gctgattccacgaactaagggatttgtatcagctgtaagtatcatgcgtgactttgtccc 122 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 626 gctgattccacgaacaaagggatttgtatcagctgtaagtattatgcgtgactttgtccc 685 Query: 123 agctatctacgatacaacagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 agctatctacgatacaacagtgattattccggaagattcgcctaaaccaacaatgctgcg 745 Query: 183 tattcttcagggacaatcatcagttgttcatgtccgcataaaacgccattcaatgagtga 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tattcttcagggacaatcatcagttgttcatgtccgcataaaacgccattcaatgagtga 805 Query: 243 tatgcctaactcggatgaggatgtttcaaaatggtgcaaagatatatttgtagcaaagga 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 tatgcctaactcggatgaggatgtttcaaaatggtgcaaagatatatttgtagcaaagga 865 Query: 303 cgcgttattggacagacatataacaactggtacttttgatgaggaaattataccaattgg 362 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 866 cgcgttattggacaaacatatagcaactggtacttttgatgaggaaattataccaattgg 925 Query: 363 tcgtccagtgaaatctttgatggtggttctgtcttggtcatgtctcctcctatatggcgc 422 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 926 ccgtccagtgaaatctttgatggtggtcctgtcttggtcatgtctcctcctatatggtgc 985 Query: 423 tcatagattcttacagtggacccagctcttgtcaacgtggaaaggagtgatcctctttgc 482 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 986 tcatagattcttacagtggacccagctcttgtcgacgtggaaaggagtgatcctctttgc 1045 Query: 483 tactggattggcaatggtgaccgccgttatgcatgtattcatcatgttctcgcaggccga 542 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 ttctggattggcaatggtaaccgccgttatgcatgtattcatcatgttctcgcaggccga 1105 Query: 543 gcgctcaagctctgctaaagcagcaagggaccgagtgaagagggattgatagcccgtgtg 602 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1106 gcgctcaagctctgcgaaagcagcaagggaccgagtgaagaaggattgatagctcgtgtg 1165 Query: 603 aaattcagtctataggggaactgccaatttattatgttcagaatatatgtagacac 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 aaattcagtctataggggaactgccaatttattatgttcagaatatatgtagacac 1221
>gb|AF479037.1| Triticum aestivum 1-acy1-glycerol-3-phosphate acyltransferase mRNA, partial cds Length = 714 Score = 559 bits (282), Expect = e-156 Identities = 392/427 (91%), Gaps = 4/427 (0%) Strand = Plus / Plus Query: 3 aaacttttagcagctcaagnaatatgcagtttcacagggtttgacagcgcctaggaatgt 62 ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| Sbjct: 289 aaacttttagcagctcaag-aatatgcaatctcacagggtttgacagcgcctaggaatgt 347 Query: 63 gctgattccacgaactaagggatttgtatcagctgtaagtatcatgcgtgactttgtccc 122 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 348 gctgattccacgaacaaagggatttgtatcagctgtaagtattatgcgtgactttgtccc 407 Query: 123 agctatctacgatacaacagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 408 agctatctatgatacaacagtgattattccagaagattcgcctaaaccaacaatgctgcg 467 Query: 183 tattcttcagggacaatcatcagttgttcatgtccgcataaaacgccattcaatgagtga 242 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 468 tattcttcagggacaatcatcagttgtacatgtccgcataaaacgccattcaatgagtga 527 Query: 243 tatgcctaactcggatgaggatgtttcaaaatggtgcaaagatatatttgtagcaaagga 302 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 528 tatgcctaactcggatgaggatgtttcaaaatggtgcaaagacatatttgtagcaaanga 587 Query: 303 cgcgttatt-ggacagacatataacaactggtacttttgatgaggaaattataccaattg 361 ||| ||||| ||||| ||||||| |||||||| |||||||||| |||| ||| || ||| Sbjct: 588 cgccttattgggacaaacatatagcaactggt-cttttgatgangaaaatattcccattn 646 Query: 362 gtcgtccagtgaaatc-tttgatggtggttctgtcttggtcatgtctcctcctatatggc 420 | |||||| || || | |||||| | || | | | ||| ||||||||||||||||| | Sbjct: 647 ggcgtccaatgnaaacttttgatngnggnccnggcntggncatgtctcctcctatatngg 706 Query: 421 gctcata 427 ||||||| Sbjct: 707 gctcata 713
>emb|Z29518.1|ZM1AG3PAT Z.mays (Black Mexican Sweet) mRNA for 1-acyl-glycerol-3-phosphate acyltransferase (putative) Length = 1518 Score = 198 bits (100), Expect = 2e-47 Identities = 277/336 (82%) Strand = Plus / Plus Query: 52 cctaggaatgtgctgattccacgaactaagggatttgtatcagctgtaagtatcatgcgt 111 ||||| ||||| || |||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 718 cctagaaatgtacttattccacgtaccaagggatttgtatctgctgtaagtattatgcga 777 Query: 112 gactttgtcccagctatctacgatacaacagtgattattccggaagattcgcctaaacca 171 || ||||| ||||| || || |||||||| || || | || ||||||| ||| ||||| Sbjct: 778 gattttgttccagccatttatgatacaactgtaatagtccctaaagattcccctcaacca 837 Query: 172 acaatgctgcgtattcttcagggacaatcatcagttgttcatgtccgcataaaacgccat 231 ||||||||||| ||| | | || ||||||||||| | ||||||||||| ||||| ||| Sbjct: 838 acaatgctgcggattttgaaagggcaatcatcagtgatacatgtccgcatgaaacgtcat 897 Query: 232 tcaatgagtgatatgcctaactcggatgaggatgtttcaaaatggtgcaaagatatattt 291 |||||||||| ||||| || || ||||||||||||||||||||||| ||||| || ||| Sbjct: 898 gcaatgagtgagatgccaaaatcagatgaggatgtttcaaaatggtgtaaagacattttt 957 Query: 292 gtagcaaaggacgcgttattggacagacatataacaactggtacttttgatgaggaaatt 351 || |||||||| || ||| |||||| ||| | |||| || ||||| |||||||| ||| Sbjct: 958 gtggcaaaggatgccttactggacaagcatttggcaacaggcactttcgatgaggagatt 1017 Query: 352 ataccaattggtcgtccagtgaaatctttgatggtg 387 | ||| ||||| |||||||||||||| ||| ||||| Sbjct: 1018 agacctattggccgtccagtgaaatcattgctggtg 1053 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 511 atgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 |||||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 1177 atgcatgtcttcatcatgttctcccaggctgagcggtcgagctc 1220
>gb|BT016275.1| Zea mays clone Contig108 mRNA sequence Length = 1026 Score = 184 bits (93), Expect = 2e-43 Identities = 279/341 (81%) Strand = Plus / Plus Query: 47 cagcgcctaggaatgtgctgattccacgaactaagggatttgtatcagctgtaagtatca 106 |||| ||||| ||||| || |||||||| || |||||||||||||| || |||||||| | Sbjct: 148 cagctcctagaaatgtacttattccacgtaccaagggatttgtatctgccgtaagtatta 207 Query: 107 tgcgtgactttgtcccagctatctacgatacaacagtgattattccggaagattcgccta 166 |||| || ||||| ||||| || ||||||||||| || || |||| ||||||| ||| Sbjct: 208 tgcgagattttgttccagccatttacgatacaactgtaatagttcctaaagattcccctc 267 Query: 167 aaccaacaatgctgcgtattcttcagggacaatcatcagttgttcatgtccgcataaaac 226 |||||||||||||||| ||| | | || ||||||||||| | ||||||||||| |||| Sbjct: 268 aaccaacaatgctgcggattttgaaagggcaatcatcagtgatacatgtccgcatgaaac 327 Query: 227 gccattcaatgagtgatatgcctaactcggatgaggatgtttcaaaatggtgcaaagata 286 | ||| |||||||||| ||||| || || ||||| || |||||||||||||| ||||| | Sbjct: 328 gtcatgcaatgagtgagatgccaaaatcagatgatgacgtttcaaaatggtgtaaagaca 387 Query: 287 tatttgtagcaaaggacgcgttattggacagacatataacaactggtacttttgatgagg 346 | ||||| |||||||| || ||| |||||| |||| | |||| || ||||| ||||||| Sbjct: 388 tttttgtggcaaaggatgccttactggacaaacatttggcaacaggcactttcgatgagg 447 Query: 347 aaattataccaattggtcgtccagtgaaatctttgatggtg 387 | |||| ||| || || || ||||||||||| ||| ||||| Sbjct: 448 agattagacctatcggccgcccagtgaaatcattgctggtg 488 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 511 atgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 612 atgcacgtcttcatcatgttctcccaggctgagcggtcgagctc 655
>gb|AY109624.1| Zea mays CL2286_1 mRNA sequence Length = 1592 Score = 174 bits (88), Expect = 2e-40 Identities = 273/336 (81%) Strand = Plus / Plus Query: 52 cctaggaatgtgctgattccacgaactaagggatttgtatcagctgtaagtatcatgcgt 111 ||||| ||||| || |||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 797 cctagaaatgtacttattccacgtaccaagggatttgtatctgctgtaagtattatgcga 856 Query: 112 gactttgtcccagctatctacgatacaacagtgattattccggaagattcgcctaaacca 171 || ||||| ||||| || || |||||||| || || | || ||||||| ||| ||||| Sbjct: 857 gattttgttccagccatttatgatacaactgtaatagtccctaaagattcccctcaacca 916 Query: 172 acaatgctgcgtattcttcagggacaatcatcagttgttcatgtccgcataaaacgccat 231 ||||||||||| ||| | | || ||||||||||| | ||||||||||| ||||| ||| Sbjct: 917 acaatgctgcggattttgaaagggcaatcatcagtgatacatgtccgcatgaaacgtcat 976 Query: 232 tcaatgagtgatatgcctaactcggatgaggatgtttcaaaatggtgcaaagatatattt 291 |||||||||| ||||| || || ||||||||||||||||||||||| ||||| | Sbjct: 977 gcaatgagtgagatgccaaaatcagatgaggatgtttcaaaatggtgtaaagacannann 1036 Query: 292 gtagcaaaggacgcgttattggacagacatataacaactggtacttttgatgaggaaatt 351 || |||||||| || ||| |||||| ||| | |||| || ||||| |||||||| ||| Sbjct: 1037 gtggcaaaggatgccttactggacaagcatttggcaacaggcactttcgatgaggagatt 1096 Query: 352 ataccaattggtcgtccagtgaaatctttgatggtg 387 | ||| ||||| |||||||||||||| ||| ||||| Sbjct: 1097 agacctattggccgtccagtgaaatcattgctggtg 1132
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 80 agggatttgtatcagctgtaagtatcatgcgtgactttgtcccagctatctacgatacaa 139 ||||||||||||||||||||| ||| ||||| || ||||| |||||||| || ||||||| Sbjct: 147031 agggatttgtatcagctgtaactattatgcgggattttgttccagctatttatgatacaa 146972 Query: 140 cagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 |||| |||||||| ||||||| ||| |||||||||||||||| Sbjct: 146971 cagtaattattccaaaagattcacctcaaccaacaatgctgcg 146929 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 211 catgtccgcataaaacgccattcaatgagtgatatgcctaactcggatgaggatgtttca 270 ||||| ||||| ||||| ||| |||||||||| ||||| || || || || ||||||||| Sbjct: 146721 catgttcgcatgaaacgtcatgcaatgagtgagatgccaaagtcagaagacgatgtttca 146662 Query: 271 aaatggtgcaaagatatatttgtagcaaagg 301 |||||||||||||| || ||||||||||||| Sbjct: 146661 aaatggtgcaaagacatctttgtagcaaagg 146631 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 497 tggtgaccgccgttatgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 ||||||| || || |||||||| |||||||||||||||||| | ||||| || ||||| Sbjct: 145657 tggtgacggcggtcatgcatgtcttcatcatgttctcgcagtcagagcgatcgagctc 145600 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 334 acttttgatgaggaaattataccaattggtcgtccagtgaaatctttgatggt 386 |||||||||||||| |||| ||||||||| || ||||| ||||| ||| |||| Sbjct: 146483 acttttgatgaggagattagaccaattggccgcccagtaaaatcattgctggt 146431 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 25 tatgcagtttcacagggtttgacagcgcctaggaatgtgctgattccacg 74 ||||| ||||||||||||||| |||| || || ||||| |||||||||| Sbjct: 148322 tatgctgtttcacagggtttgccagcacccagaaatgtattgattccacg 148273
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 80 agggatttgtatcagctgtaagtatcatgcgtgactttgtcccagctatctacgatacaa 139 ||||||||||||||||||||| ||| ||||| || ||||| |||||||| || ||||||| Sbjct: 63067 agggatttgtatcagctgtaactattatgcgggattttgttccagctatttatgatacaa 63126 Query: 140 cagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 |||| |||||||| ||||||| ||| |||||||||||||||| Sbjct: 63127 cagtaattattccaaaagattcacctcaaccaacaatgctgcg 63169 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 211 catgtccgcataaaacgccattcaatgagtgatatgcctaactcggatgaggatgtttca 270 ||||| ||||| ||||| ||| |||||||||| ||||| || || || || ||||||||| Sbjct: 63377 catgttcgcatgaaacgtcatgcaatgagtgagatgccaaagtcagaagacgatgtttca 63436 Query: 271 aaatggtgcaaagatatatttgtagcaaagg 301 |||||||||||||| || ||||||||||||| Sbjct: 63437 aaatggtgcaaagacatctttgtagcaaagg 63467 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 497 tggtgaccgccgttatgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 ||||||| || || |||||||| |||||||||||||||||| | ||||| || ||||| Sbjct: 64441 tggtgacggcggtcatgcatgtcttcatcatgttctcgcagtcagagcgatcgagctc 64498 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 334 acttttgatgaggaaattataccaattggtcgtccagtgaaatctttgatggt 386 |||||||||||||| |||| ||||||||| || ||||| ||||| ||| |||| Sbjct: 63615 acttttgatgaggagattagaccaattggccgcccagtaaaatcattgctggt 63667 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 25 tatgcagtttcacagggtttgacagcgcctaggaatgtgctgattccacg 74 ||||| ||||||||||||||| |||| || || ||||| |||||||||| Sbjct: 61776 tatgctgtttcacagggtttgccagcacccagaaatgtattgattccacg 61825
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 80 agggatttgtatcagctgtaagtatcatgcgtgactttgtcccagctatctacgatacaa 139 ||||||||||||||||||||| ||| ||||| || ||||| |||||||| || ||||||| Sbjct: 24345922 agggatttgtatcagctgtaactattatgcgggattttgttccagctatttatgatacaa 24345863 Query: 140 cagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 |||| |||||||| ||||||| ||| |||||||||||||||| Sbjct: 24345862 cagtaattattccaaaagattcacctcaaccaacaatgctgcg 24345820 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 211 catgtccgcataaaacgccattcaatgagtgatatgcctaactcggatgaggatgtttca 270 ||||| ||||| ||||| ||| |||||||||| ||||| || || || || ||||||||| Sbjct: 24345612 catgttcgcatgaaacgtcatgcaatgagtgagatgccaaagtcagaagacgatgtttca 24345553 Query: 271 aaatggtgcaaagatatatttgtagcaaagg 301 |||||||||||||| || ||||||||||||| Sbjct: 24345552 aaatggtgcaaagacatctttgtagcaaagg 24345522 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 497 tggtgaccgccgttatgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 ||||||| || || |||||||| |||||||||||||||||| | ||||| || ||||| Sbjct: 24344548 tggtgacggcggtcatgcatgtcttcatcatgttctcgcagtcagagcgatcgagctc 24344491 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 334 acttttgatgaggaaattataccaattggtcgtccagtgaaatctttgatggt 386 |||||||||||||| |||| ||||||||| || ||||| ||||| ||| |||| Sbjct: 24345374 acttttgatgaggagattagaccaattggccgcccagtaaaatcattgctggt 24345322 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 25 tatgcagtttcacagggtttgacagcgcctaggaatgtgctgattccacg 74 ||||| ||||||||||||||| |||| || || ||||| |||||||||| Sbjct: 24347213 tatgctgtttcacagggtttgccagcacccagaaatgtattgattccacg 24347164
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 80 agggatttgtatcagctgtaagtatcatgcgtgactttgtcccagctatctacgatacaa 139 ||||||||||||||||||||| ||| ||||| || ||||| |||||||| || ||||||| Sbjct: 24657591 agggatttgtatcagctgtaactattatgcgggattttgttccagctatttatgatacaa 24657532 Query: 140 cagtgattattccggaagattcgcctaaaccaacaatgctgcg 182 |||| |||||||| ||||||| ||| |||||||||||||||| Sbjct: 24657531 cagtaattattccaaaagattcacctcaaccaacaatgctgcg 24657489 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 211 catgtccgcataaaacgccattcaatgagtgatatgcctaactcggatgaggatgtttca 270 ||||| ||||| ||||| ||| |||||||||| ||||| || || || || ||||||||| Sbjct: 24657281 catgttcgcatgaaacgtcatgcaatgagtgagatgccaaagtcagaagacgatgtttca 24657222 Query: 271 aaatggtgcaaagatatatttgtagcaaagg 301 |||||||||||||| || ||||||||||||| Sbjct: 24657221 aaatggtgcaaagacatctttgtagcaaagg 24657191 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 497 tggtgaccgccgttatgcatgtattcatcatgttctcgcaggccgagcgctcaagctc 554 ||||||| || || |||||||| |||||||||||||||||| | ||||| || ||||| Sbjct: 24656217 tggtgacggcggtcatgcatgtcttcatcatgttctcgcagtcagagcgatcgagctc 24656160 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 334 acttttgatgaggaaattataccaattggtcgtccagtgaaatctttgatggt 386 |||||||||||||| |||| ||||||||| || ||||| ||||| ||| |||| Sbjct: 24657043 acttttgatgaggagattagaccaattggccgcccagtaaaatcattgctggt 24656991 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 25 tatgcagtttcacagggtttgacagcgcctaggaatgtgctgattccacg 74 ||||| ||||||||||||||| |||| || || ||||| |||||||||| Sbjct: 24658882 tatgctgtttcacagggtttgccagcacccagaaatgtattgattccacg 24658833
>dbj|AB218780.1| Prunus mume Pm22 mRNA for 1-acyl-sn-glycerol-3-phosphate acyltransferase, complete cds Length = 1741 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 256 gatgaggatgtttcaaaatggtgcaaagatatatttgtagcaaaggacgcgttattggac 315 ||||||| |||| || ||||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 987 gatgaggctgttgcacaatggtgtaaagatatatttgtagccaaggatgcattgttggac 1046 Query: 316 a 316 | Sbjct: 1047 a 1047
>gb|AF213937.1|AF213937 Prunus dulcis 1-acyl-sn-glycerol-3-phosphate acyltransferase mRNA, complete cds Length = 1396 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 256 gatgaggatgtttcaaaatggtgcaaagatatatttgtagcaaaggacgcgttattggac 315 ||||||| |||| || ||||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 734 gatgaggctgttgcacaatggtgtaaagatatatttgtagccaaggatgcattgttggac 793 Query: 316 a 316 | Sbjct: 794 a 794
>ref|XM_660146.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20376) partial mRNA Length = 1587 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 629 atttattatgttcagaatatat 650 |||||||||||||||||||||| Sbjct: 204 atttattatgttcagaatatat 183
>ref|XM_626541.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3540), partial mRNA Length = 7338 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 629 atttattatgttcagaatatat 650 |||||||||||||||||||||| Sbjct: 207 atttattatgttcagaatatat 186
>emb|Z48730.1|LDAGPATMR L.douglasii mRNA for 1-acyl-sn-glycerol-3-phosphate acyltransferase (putative) Length = 1486 Score = 44.1 bits (22), Expect = 0.58 Identities = 61/74 (82%) Strand = Plus / Plus Query: 58 aatgtgctgattccacgaactaagggatttgtatcagctgtaagtatcatgcgtgacttt 117 ||||| |||||||| || || ||||| ||||| ||||| || |||| |||||| ||| Sbjct: 759 aatgttctgattcctcgtacgaagggctttgtgtcagccgttagtaacatgcgctcattt 818 Query: 118 gtcccagctatcta 131 |||||||||||||| Sbjct: 819 gtcccagctatcta 832
>emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chromosome X, complete sequence Length = 188048 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 atataacaactggtacttttga 341 |||||||||||||||||||||| Sbjct: 148253 atataacaactggtacttttga 148274
>gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complete sequence Length = 190165 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 28181 cagtggacccagctcttgtca 28201
>gb|AC121897.2| Mus musculus BAC clone RP24-160L24 from 3, complete sequence Length = 143234 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 66847 cagtggacccagctcttgtca 66867
>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence Length = 200968 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 agcgctcaagctctgctaaag 562 ||||||||||||||||||||| Sbjct: 22507 agcgctcaagctctgctaaag 22487
>gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70009 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 agcgctcaagctctgctaaag 562 ||||||||||||||||||||| Sbjct: 26459 agcgctcaagctctgctaaag 26479
>gb|AC073866.16| Homo sapiens 12q BAC RP11-120B18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153756 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 agcgctcaagctctgctaaag 562 ||||||||||||||||||||| Sbjct: 35659 agcgctcaagctctgctaaag 35679
>dbj|AK155807.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730224K17 product:adenosine A3 receptor, full insert sequence Length = 1664 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 45 cagtggacccagctcttgtca 25
>dbj|AK154312.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630018K21 product:adenosine A3 receptor, full insert sequence Length = 1799 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 320 cagtggacccagctcttgtca 300
>ref|NM_009631.1| Mus musculus adenosine A3 receptor (Adora3), mRNA Length = 1733 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 254 cagtggacccagctcttgtca 234
>dbj|AK013534.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900016D13 product:A3 ADENOSINE RECEPTOR, full insert sequence Length = 2372 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 317 cagtggacccagctcttgtca 297
>gb|AF069778.1|AF069778 Mus musculus A3 adenosine receptor gene, complete cds Length = 5886 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 2258 cagtggacccagctcttgtca 2238
>gb|AC025786.16| Mus musculus chromosome 3, clone RP23-169H9, complete sequence Length = 181293 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cagtggacccagctcttgtca 456 ||||||||||||||||||||| Sbjct: 162238 cagtggacccagctcttgtca 162258
>gb|AC002070.1|HSAC002070 Human BAC clone 7E17 from 12q, complete sequence Length = 165197 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 agcgctcaagctctgctaaag 562 ||||||||||||||||||||| Sbjct: 78244 agcgctcaagctctgctaaag 78224
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gctctgctaaagcagcaagg 570 |||||||||||||||||||| Sbjct: 70220 gctctgctaaagcagcaagg 70201
>gb|AC008334.8| Drosophila melanogaster clone BACR08K05, complete sequence Length = 154336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 ttattatgttcagaatatat 650 |||||||||||||||||||| Sbjct: 84131 ttattatgttcagaatatat 84150
>gb|AC112258.4| Mus musculus BAC clone RP23-169M10 from 8, complete sequence Length = 203519 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gtcaacgtggaaaggagtga 472 |||||||||||||||||||| Sbjct: 1207 gtcaacgtggaaaggagtga 1226
>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4 Contains part of a novel gene, complete sequence Length = 166715 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 gagcgctcaagctctgctaa 560 |||||||||||||||||||| Sbjct: 20843 gagcgctcaagctctgctaa 20824
>emb|BX664608.6| Human DNA sequence from clone RP11-1082I11 on chromosome 9 Contains an S-phase kinase-associated protein 1A (p19A) (SKP1A) pseudogene, a novel protein and two CpG islands, complete sequence Length = 168113 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 257 atgaggatgttt-caaaatggtgcaaag 283 |||||||||||| ||||||||||||||| Sbjct: 123460 atgaggatgtttgcaaaatggtgcaaag 123487
>emb|BX248098.7| Human DNA sequence from clone CTD-2173L22 on chromosome 9 Contains a novel gene, a zinc finger protein pseudogene, a S-phase kinase-associated protein 1A (p19A) (SKP1A) pseudogene and two CpG islands, complete sequence Length = 119184 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 257 atgaggatgttt-caaaatggtgcaaag 283 |||||||||||| ||||||||||||||| Sbjct: 58929 atgaggatgtttgcaaaatggtgcaaag 58956
>emb|AL954139.7| Human DNA sequence from clone RP11-100J16 on chromosome 9 Contains a novel gene, a novel zinc finger pseudogene, S-phase kinase-associated protein 1A (SKP1A) pseudogene, a pseudogene similar to part of 6-pyruvoyltetrahydropterin synthase (PTS) and a CpG island, complete sequence Length = 159990 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 257 atgaggatgttt-caaaatggtgcaaag 283 |||||||||||| ||||||||||||||| Sbjct: 135527 atgaggatgtttgcaaaatggtgcaaag 135500
>emb|AL450313.9| Human DNA sequence from clone RP13-259N13 on chromosome 10 Contains a novel gene, complete sequence Length = 43981 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 gagcgctcaagctctgctaa 560 |||||||||||||||||||| Sbjct: 12599 gagcgctcaagctctgctaa 12580
>emb|BX664609.6| Human DNA sequence from clone RP11-111O3 on chromosome 9 Contains a S-phase kinase-associated protein 1A (p19A) (SKP1A) pseudogene and a pseduogene similar to part of a novel protein, complete sequence Length = 157893 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 257 atgaggatgttt-caaaatggtgcaaag 283 |||||||||||| ||||||||||||||| Sbjct: 116662 atgaggatgtttgcaaaatggtgcaaag 116689
>dbj|AK140684.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930089B07 product:unclassifiable, full insert sequence Length = 1754 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttcagaatatatgtagaca 657 |||||||||||||||||||| Sbjct: 1440 gttcagaatatatgtagaca 1459
>dbj|AK138093.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130090I24 product:protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, full insert sequence Length = 4596 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttcagaatatatgtagaca 657 |||||||||||||||||||| Sbjct: 3823 gttcagaatatatgtagaca 3842
>dbj|AK148789.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120446L02 product:protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, full insert sequence Length = 1370 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttcagaatatatgtagaca 657 |||||||||||||||||||| Sbjct: 1079 gttcagaatatatgtagaca 1098
>gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186703 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttcagaatatatgtagaca 657 |||||||||||||||||||| Sbjct: 136440 gttcagaatatatgtagaca 136459
>gb|AC012489.8| Homo sapiens BAC clone RP11-93I3 from 2, complete sequence Length = 120776 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ctgtcttggtcatgtctcct 410 |||||||||||||||||||| Sbjct: 89298 ctgtcttggtcatgtctcct 89279
>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete sequence Length = 299868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 ttattatgttcagaatatat 650 |||||||||||||||||||| Sbjct: 268680 ttattatgttcagaatatat 268699
>gb|AC155170.3| Mus musculus BAC clone RP23-116K3 from chromosome 8, complete sequence Length = 228121 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gtcaacgtggaaaggagtga 472 |||||||||||||||||||| Sbjct: 81010 gtcaacgtggaaaggagtga 81029 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,987,395 Number of Sequences: 3902068 Number of extensions: 4987395 Number of successful extensions: 88787 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 88635 Number of HSP's gapped (non-prelim): 151 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)