ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19k08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
2dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
3gb|AY109051.1| Zea mays PCO106076 mRNA sequence 100 8e-18
4gb|AY108057.1| Zea mays PCO106075 mRNA sequence 84 5e-13
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
7emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 72 2e-09
8ref|XM_469061.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
9dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
10dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11gb|AC091262.8| Mus musculus chromosome 9, clone RP23-38G1, compl... 46 0.11
12gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
13gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genom... 42 1.7
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
16ref|XM_509440.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 6.8
17gb|AC090691.16| Homo sapiens chromosome 8, clone RP11-338B22, co... 40 6.8
18gb|AC022559.12| Homo sapiens chromosome 8, clone RP11-404E12, co... 40 6.8
19gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome... 40 6.8
20gb|AC090805.7| Homo sapiens chromosome 8, clone RP11-55A15, comp... 40 6.8
21emb|AJ318529.1|PPU318529 Pseudomonas putida strain MU10-2 mercur... 40 6.8
22emb|CR792458.6| Zebrafish DNA sequence from clone RP71-47I2, com... 40 6.8
23gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, compl... 40 6.8
24gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, comp... 40 6.8
25gb|AC092306.2| Homo sapiens chromosome 19 clone LLNLR-231D4, com... 40 6.8
26gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, compl... 40 6.8
27gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 geno... 40 6.8
28dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
29gb|AF120977.1|AF120977 Sphingomonas paucimobilis strain 660H mer... 40 6.8
30gb|AF120976.1|AF120976 Sphingomonas paucimobilis strain 661H mer... 40 6.8
31gb|AC009474.4| Homo sapiens BAC clone RP11-179G23 from 2, comple... 40 6.8
32gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8 
>dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F01, full
            insert sequence
          Length = 2516

 Score =  139 bits (70), Expect = 1e-29
 Identities = 226/278 (81%)
 Strand = Plus / Plus

                                                                        
Query: 176  tggatgagttaaagcggcgcaaaacagctgctcgcagcatagcatctgtatgtgtggggg 235
            |||| |||| |||||| || ||| |||||| | |||||||| ||||||||||||| ||||
Sbjct: 1656 tggaggagtcaaagcgtcggaaagcagctgtttgcagcatatcatctgtatgtgtagggg 1715

                                                                        
Query: 236  ttctaatcctgacggcttcggcttctgtatcgttcctgccactcctggtgaggtgcttcg 295
            || |  |||| ||  |||| |||||| |  | ||| ||||| ||||  || | |||||| 
Sbjct: 1716 ttgtggtcctcacaacttcagcttctttcacattcttgccattccttttgcgatgcttct 1775

                                                                        
Query: 296  cctgcgtcttcggtggcctggtccttttagctggtctgggtgtgctctcctggatcgacc 355
             ||| || || ||||||||  ||||  |||| ||||| ||||| |||| ||  |||||||
Sbjct: 1776 tctgtgtttttggtggcctactcctcctagccggtctcggtgtcctctgctatatcgacc 1835

                                                                        
Query: 356  aagacgatggaaggcactcatttggtcattctggaggattcatctgcccattcgttccac 415
            |||| || || ||||||||||||||||| |||||||||||||||||||| ||||||||  
Sbjct: 1836 aagatgacgggaggcactcatttggtcactctggaggattcatctgccccttcgttccgt 1895

                                                  
Query: 416  tgctgccggtgatgtgcattctcataaacacatacttg 453
            || |||||||||||||||| ||| | ||||||||||||
Sbjct: 1896 tgttgccggtgatgtgcatcctcgtgaacacatacttg 1933



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                        
Query: 19   cgtcgttccgtttgagccaagnaatgtgatgaggaaaaggtggggagtcctcttggagat 78
            |||| |||||||||||||||| ||| |||||||||||||||  || |||||| || ||||
Sbjct: 1521 cgtcattccgtttgagccaag-aatatgatgaggaaaaggttaggggtcctcctgtagat 1579

                           
Query: 79   gggaaccatgaacag 93
            | ||| |||||||||
Sbjct: 1580 gcgaatcatgaacag 1594
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>dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D03, full
            insert sequence
          Length = 2272

 Score =  139 bits (70), Expect = 1e-29
 Identities = 226/278 (81%)
 Strand = Plus / Plus

                                                                        
Query: 176  tggatgagttaaagcggcgcaaaacagctgctcgcagcatagcatctgtatgtgtggggg 235
            |||| |||| |||||| || ||| |||||| | |||||||| ||||||||||||| ||||
Sbjct: 1412 tggaggagtcaaagcgtcggaaagcagctgtttgcagcatatcatctgtatgtgtagggg 1471

                                                                        
Query: 236  ttctaatcctgacggcttcggcttctgtatcgttcctgccactcctggtgaggtgcttcg 295
            || |  |||| ||  |||| |||||| |  | ||| ||||| ||||  || | |||||| 
Sbjct: 1472 ttgtggtcctcacaacttcagcttctttcacattcttgccattccttttgcgatgcttct 1531

                                                                        
Query: 296  cctgcgtcttcggtggcctggtccttttagctggtctgggtgtgctctcctggatcgacc 355
             ||| || || ||||||||  ||||  |||| ||||| ||||| |||| ||  |||||||
Sbjct: 1532 tctgtgtttttggtggcctactcctcctagccggtctcggtgtcctctgctatatcgacc 1591

                                                                        
Query: 356  aagacgatggaaggcactcatttggtcattctggaggattcatctgcccattcgttccac 415
            |||| || || ||||||||||||||||| |||||||||||||||||||| ||||||||  
Sbjct: 1592 aagatgacgggaggcactcatttggtcactctggaggattcatctgccccttcgttccgt 1651

                                                  
Query: 416  tgctgccggtgatgtgcattctcataaacacatacttg 453
            || |||||||||||||||| ||| | ||||||||||||
Sbjct: 1652 tgttgccggtgatgtgcatcctcgtgaacacatacttg 1689



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                        
Query: 19   cgtcgttccgtttgagccaagnaatgtgatgaggaaaaggtggggagtcctcttggagat 78
            |||| |||||||||||||||| ||| |||||||||||||||  || |||||| || ||||
Sbjct: 1277 cgtcattccgtttgagccaag-aatatgatgaggaaaaggttaggggtcctcctgtagat 1335

                           
Query: 79   gggaaccatgaacag 93
            | ||| |||||||||
Sbjct: 1336 gcgaatcatgaacag 1350
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>gb|AY109051.1| Zea mays PCO106076 mRNA sequence
          Length = 1172

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                       
Query: 338 tgctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggaggattca 397
           |||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||
Sbjct: 598 tgctctcctggatcgaccaagatgctggcaggcactcttttggtcattctggaggattca 657

                                                         
Query: 398 tctgcccattcgttccactgctgccggtgatgtgcattctcataaa 443
             ||||| || |||||| ||||||| ||  ||||||| || |||||
Sbjct: 658 catgcccttttgttccagtgctgccagttttgtgcatcctgataaa 703
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>gb|AY108057.1| Zea mays PCO106075 mRNA sequence
          Length = 668

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 338 tgctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggaggattca 397
           |||||||||||||||||||||| | ||| |||||||| ||||||||||| ||||||||||
Sbjct: 165 tgctctcctggatcgaccaagatgctggcaggcactcttttggtcattccggaggattca 224

                                 
Query: 398 tctgcccattcgttccactgct 419
             ||||| || |||||| ||||
Sbjct: 225 catgcccttttgttccagtgct 246
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 390      aggattcatctgcccattcgttccactgctgccggtgatgtgcattctcataaacacata 449
                ||||||||||||||| ||||||||  || |||||||||||||||| ||| | ||||||||
Sbjct: 26655506 aggattcatctgccccttcgttccgttgttgccggtgatgtgcatcctcgtgaacacata 26655447

                    
Query: 450      cttg 453
                ||||
Sbjct: 26655446 cttg 26655443



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 19       cgtcgttccgtttgagccaagnaatgtgatgaggaaaaggtggggagtcctcttggagat 78
                |||| |||||||||||||||| ||| |||||||||||||||  || |||||| || ||||
Sbjct: 26656132 cgtcattccgtttgagccaag-aatatgatgaggaaaaggttaggggtcctcctgtagat 26656074

                               
Query: 79       gggaaccatgaacag 93
                | ||| |||||||||
Sbjct: 26656073 gcgaatcatgaacag 26656059



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 323      tagctggtctgggtgtgctctcctggatcgaccaagacgatggaaggcactcatttggtc 382
                |||| ||||| ||||| |||| ||  ||||||||||| || || ||||||||||||||||
Sbjct: 26655671 tagccggtctcggtgtcctctgctatatcgaccaagatgacgggaggcactcatttggtc 26655612

                          
Query: 383      attctggagg 392
                | ||||||||
Sbjct: 26655611 actctggagg 26655602



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 176      tggatgagttaaagcggcgcaaaacagctgctcgcagcatagcatctgtatgtgtggggg 235
                |||| |||| |||||| || ||| |||||| | |||||||| ||||||||||||| ||||
Sbjct: 26655910 tggaggagtcaaagcgtcggaaagcagctgtttgcagcatatcatctgtatgtgtagggg 26655851

                  
Query: 236      tt 237
                ||
Sbjct: 26655850 tt 26655849
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 390      aggattcatctgcccattcgttccactgctgccggtgatgtgcattctcataaacacata 449
                ||||||||||||||| ||||||||  || |||||||||||||||| ||| | ||||||||
Sbjct: 26583675 aggattcatctgccccttcgttccgttgttgccggtgatgtgcatcctcgtgaacacata 26583616

                    
Query: 450      cttg 453
                ||||
Sbjct: 26583615 cttg 26583612



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 19       cgtcgttccgtttgagccaagnaatgtgatgaggaaaaggtggggagtcctcttggagat 78
                |||| |||||||||||||||| ||| |||||||||||||||  || |||||| || ||||
Sbjct: 26584301 cgtcattccgtttgagccaag-aatatgatgaggaaaaggttaggggtcctcctgtagat 26584243

                               
Query: 79       gggaaccatgaacag 93
                | ||| |||||||||
Sbjct: 26584242 gcgaatcatgaacag 26584228



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 323      tagctggtctgggtgtgctctcctggatcgaccaagacgatggaaggcactcatttggtc 382
                |||| ||||| ||||| |||| ||  ||||||||||| || || ||||||||||||||||
Sbjct: 26583840 tagccggtctcggtgtcctctgctatatcgaccaagatgacgggaggcactcatttggtc 26583781

                          
Query: 383      attctggagg 392
                | ||||||||
Sbjct: 26583780 actctggagg 26583771



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 176      tggatgagttaaagcggcgcaaaacagctgctcgcagcatagcatctgtatgtgtggggg 235
                |||| |||| |||||| || ||| |||||| | |||||||| ||||||||||||| ||||
Sbjct: 26584079 tggaggagtcaaagcgtcggaaagcagctgtttgcagcatatcatctgtatgtgtagggg 26584020

                  
Query: 236      tt 237
                ||
Sbjct: 26584019 tt 26584018
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 390   aggattcatctgcccattcgttccactgctgccggtgatgtgcattctcataaacacata 449
             ||||||||||||||| ||||||||  || |||||||||||||||| ||| | ||||||||
Sbjct: 74376 aggattcatctgccccttcgttccgttgttgccggtgatgtgcatcctcgtgaacacata 74317

                 
Query: 450   cttg 453
             ||||
Sbjct: 74316 cttg 74313



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                         
Query: 19    cgtcgttccgtttgagccaagnaatgtgatgaggaaaaggtggggagtcctcttggagat 78
             |||| |||||||||||||||| ||| |||||||||||||||  || |||||| || ||||
Sbjct: 75002 cgtcattccgtttgagccaag-aatatgatgaggaaaaggttaggggtcctcctgtagat 74944

                            
Query: 79    gggaaccatgaacag 93
             | ||| |||||||||
Sbjct: 74943 gcgaatcatgaacag 74929



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 323   tagctggtctgggtgtgctctcctggatcgaccaagacgatggaaggcactcatttggtc 382
             |||| ||||| ||||| |||| ||  ||||||||||| || || ||||||||||||||||
Sbjct: 74541 tagccggtctcggtgtcctctgctatatcgaccaagatgacgggaggcactcatttggtc 74482

                       
Query: 383   attctggagg 392
             | ||||||||
Sbjct: 74481 actctggagg 74472



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 176   tggatgagttaaagcggcgcaaaacagctgctcgcagcatagcatctgtatgtgtggggg 235
             |||| |||| |||||| || ||| |||||| | |||||||| ||||||||||||| ||||
Sbjct: 74780 tggaggagtcaaagcgtcggaaagcagctgtttgcagcatatcatctgtatgtgtagggg 74721

               
Query: 236   tt 237
             ||
Sbjct: 74720 tt 74719
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>ref|XM_469061.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 340  ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggaggattcatc 399
            |||| ||||||||||||||| ||||| ||||| || || || || ||||||||||| |  
Sbjct: 1636 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggaggatttaca 1695

                                                                        
Query: 400  tgcccattcgttccactgctgccggtgatgtgcattctcataaacacatacttgctcata 459
            ||||| ||||||||||| ||||| ||  |||  || ||| ||||||||||| || | |||
Sbjct: 1696 tgccctttcgttccacttctgccagtcttgtctatcctcgtaaacacatacctgttgata 1755

                 
Query: 460  aatct 464
            |||||
Sbjct: 1756 aatct 1760
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>dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A08, full
            insert sequence
          Length = 2110

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 340  ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggaggattcatc 399
            |||| ||||||||||||||| ||||| ||||| || || || || ||||||||||| |  
Sbjct: 1545 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggaggatttaca 1604

                                                                        
Query: 400  tgcccattcgttccactgctgccggtgatgtgcattctcataaacacatacttgctcata 459
            ||||| ||||||||||| ||||| ||  |||  || ||| ||||||||||| || | |||
Sbjct: 1605 tgccctttcgttccacttctgccagtcttgtctatcctcgtaaacacatacctgttgata 1664

                 
Query: 460  aatct 464
            |||||
Sbjct: 1665 aatct 1669
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>dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063A11, full
            insert sequence
          Length = 2455

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 340  ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggaggattcatc 399
            |||| ||||||||||||||| ||||| ||||| || || || || ||||||||||| |  
Sbjct: 1900 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggaggatttaca 1959

                                                                        
Query: 400  tgcccattcgttccactgctgccggtgatgtgcattctcataaacacatacttgctcata 459
            ||||| ||||||||||| ||||| ||  |||  || ||| ||||||||||| || | |||
Sbjct: 1960 tgccctttcgttccacttctgccagtcttgtctatcctcgtaaacacatacctgttgata 2019

                 
Query: 460  aatct 464
            |||||
Sbjct: 2020 aatct 2024
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>gb|AC091262.8| Mus musculus chromosome 9, clone RP23-38G1, complete sequence
          Length = 157984

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 55    aaggtggggagtcctcttggagatggg 81
             |||||||||| ||||||||||||||||
Sbjct: 44304 aaggtggggaatcctcttggagatggg 44330
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>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01,
              complete sequence
          Length = 161741

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 340    ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggagg 392
              |||| ||||||||||||||| ||||| ||||| || || || || ||||||||
Sbjct: 114833 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggagg 114781
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>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 340   ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggagg 392
             |||| ||||||||||||||| ||||| ||||| || || || || ||||||||
Sbjct: 83914 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggagg 83966
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 340      ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggagg 392
                |||| ||||||||||||||| ||||| ||||| || || || || ||||||||
Sbjct: 25218794 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggagg 25218742
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 340      ctctcctggatcgaccaagacgatggaaggcactcatttggtcattctggagg 392
                |||| ||||||||||||||| ||||| ||||| || || || || ||||||||
Sbjct: 25310166 ctctgctggatcgaccaagatgatggcaggcattctttcggccaatctggagg 25310114
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>ref|XM_509440.1| PREDICTED: Pan troglodytes similar to hypothetical protein
           B930074I24 (LOC452322), mRNA
          Length = 649

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 gccactcctggtgaggtgct 292
           ||||||||||||||||||||
Sbjct: 330 gccactcctggtgaggtgct 311
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>gb|AC090691.16| Homo sapiens chromosome 8, clone RP11-338B22, complete sequence
          Length = 180766

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ccactcctggtgaggtgctt 293
             ||||||||||||||||||||
Sbjct: 97487 ccactcctggtgaggtgctt 97468
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>gb|AC022559.12| Homo sapiens chromosome 8, clone RP11-404E12, complete sequence
          Length = 151033

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     agtcctcttggagatgggaa 83
              ||||||||||||||||||||
Sbjct: 107473 agtcctcttggagatgggaa 107454
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>gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome 12, complete sequence
          Length = 149712

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tatacacaaataaattggat 180
              ||||||||||||||||||||
Sbjct: 105432 tatacacaaataaattggat 105451
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>gb|AC090805.7| Homo sapiens chromosome 8, clone RP11-55A15, complete sequence
          Length = 97951

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    agtcctcttggagatgggaa 83
             ||||||||||||||||||||
Sbjct: 37547 agtcctcttggagatgggaa 37528
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>emb|AJ318529.1|PPU318529 Pseudomonas putida strain MU10-2 mercury resistance cassette mer2
            (inserted into a Tn5041 variant, Tn5041D)
          Length = 8208

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  gcctgcgtcttcggtggcct 314
            ||||||||||||||||||||
Sbjct: 1397 gcctgcgtcttcggtggcct 1378
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>emb|CR792458.6| Zebrafish DNA sequence from clone RP71-47I2, complete sequence
          Length = 186632

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    aatcctgacggcttcggctt 259
              ||||||||||||||||||||
Sbjct: 112892 aatcctgacggcttcggctt 112873
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>gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, complete sequence
          Length = 137411

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     ggggagtcctcttggagatgggaa 83
              |||||| |||||||||||||||||
Sbjct: 135678 ggggaggcctcttggagatgggaa 135655
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>gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, complete sequence
          Length = 142093

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   atctgtatgtgtgggggttc 238
             ||||||||||||||||||||
Sbjct: 45591 atctgtatgtgtgggggttc 45572
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>gb|AC092306.2| Homo sapiens chromosome 19 clone LLNLR-231D4, complete sequence
          Length = 35144

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   ggggagtcctcttggagatgggaa 83
            |||||| |||||||||||||||||
Sbjct: 2564 ggggaggcctcttggagatgggaa 2541
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>gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, complete sequence
          Length = 77686

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    tggagatgggaaccatgaac 91
             ||||||||||||||||||||
Sbjct: 64071 tggagatgggaaccatgaac 64052
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>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
             sequence
          Length = 138824

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   tatgtgtgggggttctaatc 243
             ||||||||||||||||||||
Sbjct: 81144 tatgtgtgggggttctaatc 81163
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 224      tatgtgtgggggttctaatc 243
                ||||||||||||||||||||
Sbjct: 20679692 tatgtgtgggggttctaatc 20679711
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>gb|AF120977.1|AF120977 Sphingomonas paucimobilis strain 660H mercury resistance operon 11,
           partial sequence
          Length = 842

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 gcctgcgtcttcggtggcct 314
           ||||||||||||||||||||
Sbjct: 735 gcctgcgtcttcggtggcct 716
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>gb|AF120976.1|AF120976 Sphingomonas paucimobilis strain 661H mercury resistance operon 11,
           partial sequence
          Length = 842

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 gcctgcgtcttcggtggcct 314
           ||||||||||||||||||||
Sbjct: 735 gcctgcgtcttcggtggcct 716
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>gb|AC009474.4| Homo sapiens BAC clone RP11-179G23 from 2, complete sequence
          Length = 168651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   tctgggtgtgctctcctgga 349
             ||||||||||||||||||||
Sbjct: 50865 tctgggtgtgctctcctgga 50846
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 224      tatgtgtgggggttctaatc 243
                ||||||||||||||||||||
Sbjct: 20690964 tatgtgtgggggttctaatc 20690983


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,801,376
Number of Sequences: 3902068
Number of extensions: 3801376
Number of successful extensions: 66923
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66767
Number of HSP's gapped (non-prelim): 151
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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