ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19k05 |
|---|---|
| Clone Library Name | barley_pub |
>RAD23_ORYSA (Q40742) Putative DNA repair protein RAD23 (OsRAD23)| Length = 392 Score = 285 bits (729), Expect = 7e-77 Identities = 150/196 (76%), Positives = 160/196 (81%), Gaps = 3/196 (1%) Frame = +3 Query: 18 NLWSAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEP 197 N A SNLVAG LEATIQSILEMGGG WDRDIVL AL AAFNNPERAVEYLYSG+PE Sbjct: 144 NYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQ 203 Query: 198 MEIXXXXXXXXXXXXXXXXLATQPA---VASSGPNASPLDLFPQALPNASTNAAGEGNLD 368 M+I ATQPA + SSGPNASPLDLFPQALPNAST+AAG GNLD Sbjct: 204 MDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAGLGNLD 263 Query: 369 VLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDED 548 LRNNAQFR+LLSLVQANPQILQPLLQELGKQNPQILQLIQ+NQAEFL LINEPAEGD++ Sbjct: 264 ALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDE 323 Query: 549 ENLLEQFAEGVPQTIA 596 ENLL+QF E +PQTIA Sbjct: 324 ENLLDQFPEAMPQTIA 339
>RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4)| (AtRAD23-4) Length = 378 Score = 226 bits (575), Expect = 5e-59 Identities = 118/193 (61%), Positives = 144/193 (74%), Gaps = 5/193 (2%) Frame = +3 Query: 30 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 209 AASNLVAG TLE+T+Q IL+MGGG+WDRD V+RALRAAFNNPERAVEYLYSGIP EI Sbjct: 138 AASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIP 197 Query: 210 XXXXXXXXXXXXXXXLA-----TQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVL 374 LA PA A+ GPNA+PL+LFPQ +P A A G GNLD L Sbjct: 198 PVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQGMPAADAGA-GAGNLDFL 256 Query: 375 RNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDEN 554 RN+ QF++L ++VQANPQILQP+LQELGKQNPQ+++LIQ++QA+FLRLINEP EG +EN Sbjct: 257 RNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEG--EEN 314 Query: 555 LLEQFAEGVPQTI 593 ++EQ +PQ + Sbjct: 315 VMEQLEAAMPQAV 327
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 219 bits (559), Expect = 4e-57 Identities = 119/190 (62%), Positives = 140/190 (73%), Gaps = 4/190 (2%) Frame = +3 Query: 30 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 209 AASNL AG LE+TIQ IL+MGGGTWDR+ V+ ALRAAFNNPERAVEYLY+GIPE E+ Sbjct: 177 AASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP 236 Query: 210 XXXXXXXXXXXXXXXLAT--QPAVA-SSGPNASPLDLFPQALPNASTNAAGEGNLDVLRN 380 A QPA A +SGPNA+PLDLFPQ LPN N G G LD LRN Sbjct: 237 PVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNP-GAGTLDFLRN 295 Query: 381 NAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE-GDEDENL 557 + QF++L ++VQANPQ+LQP+LQELGKQNP +++LIQD+QA+FLRLINEP E G E NL Sbjct: 296 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 355 Query: 558 LEQFAEGVPQ 587 L Q A G+PQ Sbjct: 356 LGQMAAGMPQ 365
>RD23A_ARATH (Q84L33) Putative DNA repair protein RAD23-1 (RAD23-like protein 1)| (AtRAD23-1) Length = 371 Score = 194 bits (492), Expect = 2e-49 Identities = 102/189 (53%), Positives = 133/189 (70%), Gaps = 1/189 (0%) Frame = +3 Query: 30 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 209 AAS LV+G +LE +Q I+EMGGG+WD++ V RALRAA+NNPERAV+YLYSGIP+ E+ Sbjct: 138 AASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVA 197 Query: 210 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 389 A A AS GPN+SPLDLFPQ A+ + G L+ LRNN Q Sbjct: 198 VPVPEAQIAGSG----AAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQ 252 Query: 390 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDE-NLLEQ 566 F+ L ++V +NPQILQP+LQELGKQNPQ+L+LIQ+NQAEFL+L+NEP EG + E ++ +Q Sbjct: 253 FQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQ 312 Query: 567 FAEGVPQTI 593 + +P I Sbjct: 313 PEQEMPHAI 321
>RD23B_ARATH (Q84L32) Putative DNA repair protein RAD23-2 (RAD23-like protein 2)| (AtRAD23-2) Length = 368 Score = 191 bits (485), Expect = 1e-48 Identities = 106/200 (53%), Positives = 138/200 (69%), Gaps = 3/200 (1%) Frame = +3 Query: 3 TRRSRNLWSAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYS 182 T +S AAS LV+G ++E +Q I+EMGGG+WD++ V RALRAA+NNPERAV+YLYS Sbjct: 127 TAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYS 186 Query: 183 GIPEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGE-- 356 GIPE + I L P S GPN+SPLDLFPQ A ++AAG Sbjct: 187 GIPETVTIPATNLSGVGSGRE---LTAPPP--SGGPNSSPLDLFPQ---EAVSDAAGGDL 238 Query: 357 GNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE 536 G L+ LR N QF+ L S+V +NPQILQP+LQELGKQNPQ+L+LIQ+NQAEFL+L+NEP E Sbjct: 239 GTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYE 298 Query: 537 G-DEDENLLEQFAEGVPQTI 593 G D D ++ +Q + +P ++ Sbjct: 299 GSDGDVDIFDQPDQEMPHSV 318
>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 416 Score = 110 bits (275), Expect = 3e-24 Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 1/177 (0%) Frame = +3 Query: 9 RSRNLWSAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGI 188 RS A S LV G + E + I+ MG ++R+ V+ ALRA+FNNP+RAVEYL GI Sbjct: 173 RSNLFEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGI 229 Query: 189 PEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGN-L 365 P E + P S+G SP A A+T G+ L Sbjct: 230 PGDRE-------------SQAVVDPPPQAVSTGTPQSPAVAAAAATTTATTTTTSGGHPL 276 Query: 366 DVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE 536 + LRN QF+ + ++Q NP +L LLQ++G++NPQ+LQ I +Q F++++NEP + Sbjct: 277 EFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQ 333
>RD23B_HUMAN (P54727) UV excision repair protein RAD23 homolog B (hHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 409 Score = 109 bits (273), Expect = 5e-24 Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 2/178 (1%) Frame = +3 Query: 9 RSRNLWSAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGI 188 RS A S LV G + E + I+ MG ++R+ V+ ALRA+FNNP+RAVEYL GI Sbjct: 173 RSNLFEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGI 229 Query: 189 PEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGN-- 362 P E + P AS+G S A A+T G Sbjct: 230 PGDRE--------------SQAVVDPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHP 275 Query: 363 LDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE 536 L+ LRN QF+ + ++Q NP +L LLQ++G++NPQ+LQ I +Q F++++NEP + Sbjct: 276 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQ 333
>RD23A_MOUSE (P54726) UV excision repair protein RAD23 homolog A (mHR23A)| Length = 363 Score = 103 bits (256), Expect = 5e-22 Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 4/190 (2%) Frame = +3 Query: 30 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 209 AAS LV G E + I+ MG ++R+ V+ ALRA++NNP RAVEYL +GIP E Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE-- 207 Query: 210 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 389 A QPA T AAGE L+ LR+ Q Sbjct: 208 -----PEHGSVQESQRAEQPA----------------------TEAAGENPLEFLRDQPQ 240 Query: 390 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEP----AEGDEDENL 557 F+++ ++Q NP +L LLQ+LG++NPQ+LQ I +Q +F++++NEP A+ + E Sbjct: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300 Query: 558 LEQFAEGVPQ 587 + E PQ Sbjct: 301 VGAIGEEAPQ 310
>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)| Length = 363 Score = 103 bits (256), Expect = 5e-22 Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 4/190 (2%) Frame = +3 Query: 30 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 209 AAS LV G E + I+ MG ++R+ V+ ALRA++NNP RAVEYL +GIP E Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPEPE 209 Query: 210 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 389 + Q + S P +T AAGE L+ LR+ Q Sbjct: 210 HG--------------SVQESQVSEQP---------------ATEAAGENPLEFLRDQPQ 240 Query: 390 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEP----AEGDEDENL 557 F+++ ++Q NP +L LLQ+LG++NPQ+LQ I +Q +F++++NEP A+ + E Sbjct: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300 Query: 558 LEQFAEGVPQ 587 + E PQ Sbjct: 301 VGAIGEEAPQ 310
>RHP23_SCHPO (O74803) UV excision repair protein rhp23 (RAD23 homolog)| Length = 368 Score = 100 bits (250), Expect = 2e-21 Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 6/176 (3%) Frame = +3 Query: 33 ASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIXX 212 A+ L G +++++EMG ++R V RA+RAAFNNP+RAVEYL +GIPE + + Sbjct: 138 ANTLAVGAQRNVAVENMVEMG---YERSEVERAMRAAFNNPDRAVEYLLTGIPEDI-LNR 193 Query: 213 XXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNAS------TNAAGEGNLDVL 374 + A S+G P +LF QA + + +N G+ L L Sbjct: 194 QREESAAALAAQQQQSEALAPTSTG---QPANLFEQAALSENENQEQPSNTVGDDPLGFL 250 Query: 375 RNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGD 542 R+ QF+ L +VQ NPQ+L+ +LQ++G+ +P + Q I N FL+L+ E AEG+ Sbjct: 251 RSIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLLAEGAEGE 306
>RAD23_YEAST (P32628) UV excision repair protein RAD23| Length = 398 Score = 79.7 bits (195), Expect = 6e-15 Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 14/193 (7%) Frame = +3 Query: 27 SAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEI 206 ++ V G TI+ I+EMG + R+ V RALRAAFNNP+RAVEYL GIPE + Sbjct: 137 ASTPGFVVGTERNETIERIMEMG---YQREEVERALRAAFNNPDRAVEYLLMGIPENLR- 192 Query: 207 XXXXXXXXXXXXXXXXLATQPA-VASSGPNASPLDLFPQALP--NASTNAAGE--GNLDV 371 A QP+ A++ + DLF QA NAS+ A G G D Sbjct: 193 ------QPEPQQQTAAAAEQPSTAATTAEQPAEDDLFAQAAQGGNASSGALGTTGGATDA 246 Query: 372 LRNN---------AQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLIN 524 + SL +V NP+ L PLL+ + + PQ+ + I N F+ ++ Sbjct: 247 AQGGPPGSIGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIMANPEVFVSMLL 306 Query: 525 EPAEGDEDENLLE 563 E A GD ++++E Sbjct: 307 E-AVGDNMQDVME 318
>FOXP4_HUMAN (Q8IVH2) Forkhead box protein P4 (Fork head-related protein-like A)| Length = 680 Score = 33.5 bits (75), Expect = 0.48 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = +3 Query: 303 LDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQ 482 L + Q L ++ + GN D ++ + + +S+ +PQ+L P + PQ+ Sbjct: 70 LQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQQMQQILSPPQLQA 129 Query: 483 LIQDNQAEFLRLINEPAEGDEDE---NLLEQFAEGVPQ 587 L+Q QA L+ + E + +++ LL Q G PQ Sbjct: 130 LLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQAGKPQ 167
>UBP5_MOUSE (P56399) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T) Length = 858 Score = 33.1 bits (74), Expect = 0.62 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = +3 Query: 63 EATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPE 194 E + +I+ MG + RD L+ALRA N+ ERAV++++S I + Sbjct: 725 EDCVTTIVSMG---FSRDQALKALRATNNSLERAVDWIFSHIDD 765
>UBP5_HUMAN (P45974) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T) Length = 858 Score = 33.1 bits (74), Expect = 0.62 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = +3 Query: 63 EATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPE 194 E + +I+ MG + RD L+ALRA N+ ERAV++++S I + Sbjct: 725 EDCVTTIVSMG---FSRDQALKALRATNNSLERAVDWIFSHIDD 765
>PFLA_HAEIN (P43751) Pyruvate formate-lyase 1-activating enzyme (EC 1.97.1.4)| (PFL-activating enzyme) (Formate-C-acetyltransferase-activating enzyme 1) Length = 245 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +3 Query: 399 LLSLVQANPQILQPLLQELGKQNPQILQLIQD-NQAEFLRLINEPA--EGDEDENLLEQF 569 LL L + N Q+ Q L+ K+ + + +Q NQ ++R + P + D D +LL QF Sbjct: 127 LLDLKELNDQVHQNLIGVPNKRTLEFAKYLQKRNQHTWIRYVVVPGYTDSDHDVHLLGQF 186 Query: 570 AEGV 581 EG+ Sbjct: 187 IEGM 190
>BIOF_HAEIN (P44422) 8-amino-7-oxononanoate synthase (EC 2.3.1.47) (AONS)| (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase) Length = 380 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Frame = +1 Query: 34 LQTLLREAP*RQQFSQFLKWAVEHGTEIL----CFVPYVL 141 L L +E +Q S FL+ VEH T+I+ C VPY+L Sbjct: 286 LPQLSKERTHLEQLSAFLRQEVEHRTQIMPSQTCIVPYIL 325
>UBC2_DEBHA (Q6BU36) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 168 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 12/101 (11%) Frame = +3 Query: 288 PNASPLDLFPQALPNASTNAAGEGNLDVLRN----NAQFRSLLSLVQA---NPQILQPLL 446 PN P F + + + A+GE LD+L+N S+L+ +Q+ +P I P Sbjct: 64 PNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSP-- 121 Query: 447 QELGKQNPQILQLIQDNQAEFLRLINEPAEG-----DEDEN 554 N + L +D+++++++ + E E DEDE+ Sbjct: 122 -----ANVEAANLYKDHRSQYIKRVRETVENSWNEDDEDED 157
>MDR12_ARATH (Q9C7F2) Multidrug resistance protein 12 (P-glycoprotein 14)| Length = 1247 Score = 30.8 bits (68), Expect = 3.1 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +3 Query: 294 ASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQE----LGK 461 A+ D F ++LPN GEG + Q ++ V NP+IL LL E L Sbjct: 486 AANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL--LLDEATSALDA 543 Query: 462 QNPQILQLIQDNQAE 506 ++ +I+Q DN E Sbjct: 544 ESEKIVQQALDNVME 558
>MDR15_ARATH (Q9C7F8) Putative multidrug resistance protein 15 (P-glycoprotein| 13) Length = 1245 Score = 30.8 bits (68), Expect = 3.1 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +3 Query: 294 ASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQE----LGK 461 A+ D F ++LPN GEG + Q ++ V NP+IL LL E L Sbjct: 485 AANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL--LLDEATSALDA 542 Query: 462 QNPQILQLIQDNQAE 506 ++ +I+Q DN E Sbjct: 543 ESEKIVQQALDNVME 557
>ARCA_STAEQ (Q5HKU2) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine| dihydrolase) (AD) Length = 411 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +3 Query: 438 PLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGV 581 P L+ +++ Q++QD E L L A+ ED N+ EQF + V Sbjct: 44 PFLKVAQQEHDHFAQVLQDEGIEVLYLEKLAAQSIEDSNVREQFIDDV 91
>ARCA2_STAES (Q8CMW1) Arginine deiminase 2 (EC 3.5.3.6) (ADI 2) (Arginine| dihydrolase 2) (AD 2) Length = 411 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +3 Query: 438 PLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGV 581 P L+ +++ Q++QD E L L A+ ED N+ EQF + V Sbjct: 44 PFLKVAQQEHDHFAQVLQDEGIEVLYLEKLAAQSIEDSNVREQFIDDV 91
>UBC2_SCHPO (P23566) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (RAD6 homolog) Length = 151 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = +3 Query: 288 PNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQN 467 PN PL F + + + A GE LD+L+N ++ + + Q L N Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPAN 123 Query: 468 PQILQLIQDNQAEFLRLINEPAE 536 + QL ++N+ E++R + + E Sbjct: 124 AEAAQLHRENKKEYVRRVRKTVE 146
>MAON_MOUSE (Q8BMF3) NADP-dependent malic enzyme, mitochondrial precursor (EC| 1.1.1.40) (NADP-ME) (Malic enzyme 3) Length = 604 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = +3 Query: 420 NPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGV 581 NPQ P+L ++G N ++L+ ++ L ++ G+E ++LL++F + V Sbjct: 219 NPQQCLPVLLDVGTNNEELLR-----DPLYIGLKHQRVRGEEYDDLLDEFMQAV 267
>NOG2_HUMAN (Q13823) Nucleolar GTP-binding protein 2 (Autoantigen NGP-1)| Length = 731 Score = 29.6 bits (65), Expect = 6.9 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 16/76 (21%) Frame = +3 Query: 288 PNASPLDLFPQALPNAS----------------TNAAGEGNLDVLRNNAQFRSLLSLVQA 419 PNA PL + PQ LP++S T AGEG+ +++ + S Sbjct: 463 PNAEPL-VAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTE 521 Query: 420 NPQILQPLLQELGKQN 467 QIL + Q GK N Sbjct: 522 MQQILTRVRQNFGKIN 537
>CITXG_HAEIN (P44458) Protein citXG [Includes: Apo-citrate lyase| phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) (Holo-ACP synthase) (Holo-citrate lyase synthase) (Apo-ACP nucleodityltransferase); 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A sy Length = 465 Score = 29.3 bits (64), Expect = 9.0 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = +1 Query: 4 RGEAETYGRLLQTLLREAP*RQQFSQFLKWAVEHGTEILCFVPYVLHSTT----RSGLLS 171 RGEAE L+QTLL QF ++ + EH IL ++S T R GL Sbjct: 351 RGEAENGFNLIQTLL------PQFDEYHQLEWEHRLLILLLNLMAINSDTNVVHRGGLAG 404 Query: 172 IYILVFRSRWRFLHQHQV 225 +Y + ++ QH V Sbjct: 405 LYFIQQTAQDLLTDQHLV 422
>VGLI_BHV1S (Q08102) Glycoprotein I| Length = 380 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/77 (29%), Positives = 29/77 (37%) Frame = +3 Query: 126 RALRAAFNNPERAVEYLYSGIPEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPL 305 RA RA PER + E E+ L T PA ++ P ASP Sbjct: 222 RAARAGPRRPER--------VDETTEVEAATRAGSAFA-----LTTPPAGPTASPAASPS 268 Query: 306 DLFPQALPNASTNAAGE 356 F A P A+ AG+ Sbjct: 269 RAFSAAAPAAAAQPAGD 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,307,252 Number of Sequences: 219361 Number of extensions: 1481798 Number of successful extensions: 4694 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4565 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4678 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
