ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19i20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464397.1| Oryza sativa (japonica cultivar-group), mRNA 280 5e-72
2dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 5e-72
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
5dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
6gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence 218 2e-53
7ref|XM_467595.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
8dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
9ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.52
10ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.52
11ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.52
12gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.52
13gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.52
14emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 o... 44 0.52
15gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA,... 44 0.52
16emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta ... 44 0.52
17gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gam... 44 0.52
18dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibi... 44 0.52
19gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB... 42 2.0
20gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosom... 42 2.0
21gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.0
22gb|CP000088.1| Thermobifida fusca YX, complete genome 42 2.0
23emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for D... 42 2.0
24dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 2.0
25gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
26gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase... 40 8.1
27ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 8.1
28gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.1
29emb|AL450428.6| Human DNA sequence from clone RP11-264J11 on chr... 40 8.1
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.1
31emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.1
32emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 8.1
33emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 8.1
34emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 8.1
35emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 40 8.1
36gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, compl... 40 8.1
37gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence 40 8.1
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
39emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in ... 40 8.1
40dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
41emb|AL929374.7| Zebrafish DNA sequence from clone CH211-89M7 in ... 40 8.1
42emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, comp... 40 8.1
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
44emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 40 8.1 
>ref|XM_464397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 722

 Score =  280 bits (141), Expect = 5e-72
 Identities = 201/221 (90%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatcttccgg 257
           ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 320

                                                                       
Query: 258 cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 317
           || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 321 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 380

                                                                       
Query: 318 cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgc 377
            |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||||
Sbjct: 381 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 440

                                                    
Query: 378 cgcaggcgtatgatggatgatcgtaggttcccagaagacga 418
           ||||||||||||||||| || | ||||||||||||||||||
Sbjct: 441 cgcaggcgtatgatggaggagcctaggttcccagaagacga 481



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 91  tgagcgccctgctccagcttcccctggctccgttctcgggga 132
           ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 145 tgagcgcgctgctgcagcttcccctggccccgttctccggga 186
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>dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095G03, full
           insert sequence
          Length = 722

 Score =  280 bits (141), Expect = 5e-72
 Identities = 201/221 (90%)
 Strand = Plus / Plus

                                                                       
Query: 198 aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatcttccgg 257
           ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 320

                                                                       
Query: 258 cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 317
           || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 321 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 380

                                                                       
Query: 318 cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgc 377
            |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||||
Sbjct: 381 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 440

                                                    
Query: 378 cgcaggcgtatgatggatgatcgtaggttcccagaagacga 418
           ||||||||||||||||| || | ||||||||||||||||||
Sbjct: 441 cgcaggcgtatgatggaggagcctaggttcccagaagacga 481



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 91  tgagcgccctgctccagcttcccctggctccgttctcgggga 132
           ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 145 tgagcgcgctgctgcagcttcccctggccccgttctccggga 186
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Minus

                                                                           
Query: 198     aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatcttccgg 257
               ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4937537 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 4937478

                                                                           
Query: 258     cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 317
               || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 4937477 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 4937418

                                                                           
Query: 318     cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgc 377
                |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||||
Sbjct: 4937417 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 4937358

                     
Query: 378     cgcagg 383
               ||||||
Sbjct: 4937357 cgcagg 4937352



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                            
Query: 238      gggaggactccatcttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 297
                ||||||| |||||||||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 30358796 gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 30358854

                                         
Query: 298      agatcaagcgccgccgccggcacga 322
                ||||||| |||||||||||| ||||
Sbjct: 30358855 agatcaaacgccgccgccggtacga 30358879



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 379     gcaggcgtatgatggatgatcgtaggttcccagaagacga 418
               |||||||||||||||| || | ||||||||||||||||||
Sbjct: 4936807 gcaggcgtatgatggaggagcctaggttcccagaagacga 4936768



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 91      tgagcgccctgctccagcttcccctggctccgttctcgggga 132
               ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 4937653 tgagcgcgctgctgcagcttcccctggccccgttctccggga 4937612



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 353      ccgcgaggccggccgccgca 372
                ||||||||||||||||||||
Sbjct: 30358903 ccgcgaggccggccgccgca 30358922
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>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0031B09
          Length = 132729

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Minus

                                                                        
Query: 198  aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatcttccgg 257
            ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 8663 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 8604

                                                                        
Query: 258  cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 317
            || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 8603 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 8544

                                                                        
Query: 318  cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgc 377
             |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||||
Sbjct: 8543 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 8484

                  
Query: 378  cgcagg 383
            ||||||
Sbjct: 8483 cgcagg 8478



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 379  gcaggcgtatgatggatgatcgtaggttcccagaagacga 418
            |||||||||||||||| || | ||||||||||||||||||
Sbjct: 7933 gcaggcgtatgatggaggagcctaggttcccagaagacga 7894



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 91   tgagcgccctgctccagcttcccctggctccgttctcgggga 132
            ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 8779 tgagcgcgctgctgcagcttcccctggccccgttctccggga 8738
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>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Minus

                                                                         
Query: 198   aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatcttccgg 257
             ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 82276 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 82217

                                                                         
Query: 258   cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 317
             || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 82216 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 82157

                                                                         
Query: 318   cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgc 377
              |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||||
Sbjct: 82156 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 82097

                   
Query: 378   cgcagg 383
             ||||||
Sbjct: 82096 cgcagg 82091



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 379   gcaggcgtatgatggatgatcgtaggttcccagaagacga 418
             |||||||||||||||| || | ||||||||||||||||||
Sbjct: 81546 gcaggcgtatgatggaggagcctaggttcccagaagacga 81507



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 91    tgagcgccctgctccagcttcccctggctccgttctcgggga 132
             ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 82392 tgagcgcgctgctgcagcttcccctggccccgttctccggga 82351
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>gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence
          Length = 632

 Score =  218 bits (110), Expect = 2e-53
 Identities = 197/226 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 tggccgctaagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactcca 249
           ||||||| ||||| ||||| |||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 151 tggccgccaaggggtacaatgtgcggatcctggtggacgagaacgagggggaggagtcca 210

                                                                       
Query: 250 tcttccggcgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgcc 309
           |||||||||| |||||||||| |||||||  ||||||| |||| ||||||||||||||||
Sbjct: 211 tcttccggcggttccggcggggggtgatgcgggccggcgtgctgcaggagatcaagcgcc 270

                                                                       
Query: 310 gccgccggcacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgcc 369
           | ||  || | |||| ||  | |||| ||||||  |||||||| ||||||||||| ||||
Sbjct: 271 gtcggaggtatgagagcaagacggacgagaagaagcgcaaggcgcgcgaggccgggcgcc 330

                                                         
Query: 370 gcaaccgccgcaggcgtatgatggatgatcgtaggttcccagaaga 415
           |||||||||||||||||||||||||||| |  ||||||||||||||
Sbjct: 331 gcaaccgccgcaggcgtatgatggatgagccgaggttcccagaaga 376
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>ref|XM_467595.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1551

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 238 gggaggactccatcttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 297
           ||||||| |||||||||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 60  gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 118

                                    
Query: 298 agatcaagcgccgccgccggcacga 322
           ||||||| |||||||||||| ||||
Sbjct: 119 agatcaaacgccgccgccggtacga 143



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 ccgcgaggccggccgccgca 372
           ||||||||||||||||||||
Sbjct: 167 ccgcgaggccggccgccgca 186
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                         
Query: 238   gggaggactccatcttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 297
             ||||||| |||||||||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 39656 gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 39714

                                      
Query: 298   agatcaagcgccgccgccggcacga 322
             ||||||| |||||||||||| ||||
Sbjct: 39715 agatcaaacgccgccgccggtacga 39739



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ccgcgaggccggccgccgca 372
             ||||||||||||||||||||
Sbjct: 39763 ccgcgaggccggccgccgca 39782
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>ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 3, mRNA
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 504 agggagactcagaggctgtgag 525
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>ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 1, mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 609 agggagactcagaggctgtgag 630
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>ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 2, mRNA
          Length = 1206

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 357 agggagactcagaggctgtgag 378
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>gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126458
           IMAGE:40035945), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 345 agggagactcagaggctgtgag 366
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>gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126459
           IMAGE:40035946), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 345 agggagactcagaggctgtgag 366
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>emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 on chromosome 20 Contains the 3'
              end of the C20orf121 gene for chromosome 20 open reading
              frame 121, the TDE1 gene for tumour differentially
              expressed 1, the PKIG gene for protein kinase
              (cAMP-dependent, catalytic) inhibitor gamma, the 3' end of
              the ADA gene for adenosine deaminase and two CpG islands,
              complete sequence
          Length = 147708

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 418    agggagactcagaggctgtgag 439
              ||||||||||||||||||||||
Sbjct: 131542 agggagactcagaggctgtgag 131563
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>gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA, complete cds
          Length = 1185

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 333 agggagactcagaggctgtgag 354
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>emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1124

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 303 agggagactcagaggctgtgag 324
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>gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gamma (PKIG) mRNA, complete
           cds
          Length = 1073

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 225 agggagactcagaggctgtgag 246
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>dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibitor gamma, complete
           cds
          Length = 923

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 418 agggagactcagaggctgtgag 439
           ||||||||||||||||||||||
Sbjct: 84  agggagactcagaggctgtgag 105
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>gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB) gene, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 261  ttccggcgggaggtgatgaaggccg 285
            ||||||||||||| |||||||||||
Sbjct: 1031 ttccggcgggaggggatgaaggccg 1007
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>gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosome 18, complete
             sequence
          Length = 153492

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   acaccaaggacaagaagattc 345
             |||||||||||||||||||||
Sbjct: 48238 acaccaaggacaagaagattc 48258
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 213     cagatcgtggtggacgagaac 233
               |||||||||||||||||||||
Sbjct: 5144815 cagatcgtggtggacgagaac 5144835
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 278     gaaggccggcctgctccaggagatc 302
               ||||||| |||||||||||||||||
Sbjct: 2410754 gaaggcccgcctgctccaggagatc 2410730
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>emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for DNA gyrase subunit
           B, type strain DSM 14217
          Length = 1101

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 cgcaaggcccgcgaggccggccgccgcaa 373
           ||||||||||||||| ||| |||||||||
Sbjct: 812 cgcaaggcccgcgagaccgcccgccgcaa 840
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 299    gatcaagcgccgccgccggcacgag 323
              ||||| |||||||||||||||||||
Sbjct: 699261 gatcatgcgccgccgccggcacgag 699285
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   cccgcgaggccggccgccgc 371
             ||||||||||||||||||||
Sbjct: 80700 cccgcgaggccggccgccgc 80719
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>gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase beta subunit (rpoB)
            gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  aggccggcctgctccaggag 299
            ||||||||||||||||||||
Sbjct: 3662 aggccggcctgctccaggag 3643
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>ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03110.4) partial mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 207 aacgtgcagatcgtggtggacgag 230
           |||||||||||||| |||||||||
Sbjct: 490 aacgtgcagatcgtcgtggacgag 513
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     tgatgaaggccggcctgctc 293
               ||||||||||||||||||||
Sbjct: 1921226 tgatgaaggccggcctgctc 1921245
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>emb|AL450428.6| Human DNA sequence from clone RP11-264J11 on chromosome 9, complete
             sequence
          Length = 84808

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   cttttcttttgcctgcatgg 569
             ||||||||||||||||||||
Sbjct: 63522 cttttcttttgcctgcatgg 63541
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 363     ggccgccgcaaccgccgcaggcgt 386
               |||||||||||||||||| |||||
Sbjct: 2304609 ggccgccgcaaccgccgccggcgt 2304586
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    aggcccgcgaggccggccgc 368
              ||||||||||||||||||||
Sbjct: 175622 aggcccgcgaggccggccgc 175641
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   aggcccgcgaggccggccgc 368
             ||||||||||||||||||||
Sbjct: 87615 aggcccgcgaggccggccgc 87634
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  aggcccgcgaggccggccgc 368
            ||||||||||||||||||||
Sbjct: 9164 aggcccgcgaggccggccgc 9183
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ccgcgaggccggccgccgca 372
             ||||||||||||||||||||
Sbjct: 90580 ccgcgaggccggccgccgca 90561
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>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
            glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 352  cccgcgaggccggccgccgcaacc 375
            ||||||||| ||||||||||||||
Sbjct: 1524 cccgcgaggtcggccgccgcaacc 1501
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>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence
          Length = 110184

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gctccagcttcccctggctc 120
             ||||||||||||||||||||
Sbjct: 55345 gctccagcttcccctggctc 55364
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>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence
          Length = 184706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 104   ccagcttcccctggctccgttctc 127
             ||||||||||| ||||||||||||
Sbjct: 61580 ccagcttccccaggctccgttctc 61557
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 352      cccgcgaggccggccgccgc 371
                ||||||||||||||||||||
Sbjct: 18814810 cccgcgaggccggccgccgc 18814829
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>emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in linkage group 1,
             complete sequence
          Length = 148904

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   accttttcttttgcctgcat 567
             ||||||||||||||||||||
Sbjct: 22317 accttttcttttgcctgcat 22298
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>dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037B09, full
            insert sequence
          Length = 1917

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  cccgcgaggccggccgccgc 371
            ||||||||||||||||||||
Sbjct: 1540 cccgcgaggccggccgccgc 1521
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>emb|AL929374.7| Zebrafish DNA sequence from clone CH211-89M7 in linkage group 5,
             complete sequence
          Length = 179521

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   accttttcttttgcctgcat 567
             ||||||||||||||||||||
Sbjct: 54491 accttttcttttgcctgcat 54472
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>emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, complete sequence
          Length = 38950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   accttttcttttgcctgcat 567
             ||||||||||||||||||||
Sbjct: 12796 accttttcttttgcctgcat 12815
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 352      cccgcgaggccggccgccgc 371
                ||||||||||||||||||||
Sbjct: 18975506 cccgcgaggccggccgccgc 18975525
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>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
              sequence
          Length = 136540

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    gctccaggagatcaagcgcc 309
              ||||||||||||||||||||
Sbjct: 119529 gctccaggagatcaagcgcc 119510


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,616,183
Number of Sequences: 3902068
Number of extensions: 4616183
Number of successful extensions: 93934
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93175
Number of HSP's gapped (non-prelim): 755
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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