ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 446 e-122
2gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 446 e-122
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 446 e-122
4dbj|AK121215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
5gb|BT017489.1| Zea mays clone EL01N0413B02.c mRNA sequence 48 0.029
6gb|AY596558.1| Saccharum officinarum clone SCVPRT2074F10, comple... 48 0.029
7gb|AY104704.1| Zea mays PCO133361 mRNA sequence 48 0.029
8gb|AY105502.1| Zea mays PCO135520 mRNA sequence 46 0.11
9gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete se... 44 0.45
10gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-3... 44 0.45
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
12dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
13gb|CP000097.1| Synechococcus sp. CC9902, complete genome 42 1.8
14ref|XM_416901.1| PREDICTED: Gallus gallus similar to Rev1S (LOC4... 42 1.8
15gb|AC121852.4| Mus musculus chromosome 3 clone RP24-93P18, compl... 42 1.8
16gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, comple... 42 1.8
17gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, comple... 42 1.8
18ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle be... 40 7.0
19gb|AC117812.9| Mus musculus chromosome 5, clone RP24-571E8, comp... 40 7.0
20ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (i... 40 7.0
21ref|NM_010427.2| Mus musculus hepatocyte growth factor (Hgf), mRNA 40 7.0
22ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (incl... 40 7.0
23gb|AY623113.1| Homo sapiens origin recognition complex, subunit ... 40 7.0
24gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome... 40 7.0
25gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, comp... 40 7.0
26gb|AC116420.8| Mus musculus chromosome 1, clone RP24-141B16, com... 40 7.0
27gb|AC113511.7| Mus musculus chromosome 1, clone RP23-378O19, com... 40 7.0
28gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome... 40 7.0
29emb|AL451126.18| Human DNA sequence from clone RP11-106G15 on ch... 40 7.0
30emb|AL354773.8| Human DNA sequence from clone RP5-855L24 on chro... 40 7.0
31gb|AF013185.1|AH005869S14 Homo sapiens beta-spectrin (HSpTB1) ge... 40 7.0
32emb|X72307.1|MMHGF M.musculus mRNA for hepatocyte growth factor 40 7.0
33emb|X59511.1|HSBSPEC3 H.sapiens mRNA for beta-spectrin (3' partial) 40 7.0
34emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 7.0
35emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on ch... 40 7.0
36gb|AC011462.4| Homo sapiens chromosome 19 clone CTC-435M10, comp... 40 7.0
37gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, co... 40 7.0
38gb|AF465439.1| Homo sapiens beta I spectrin form betaI sigma3 mR... 40 7.0
39gb|S71816.1| hepatocyte growth factor [mice, liver, mRNA Partial... 40 7.0
40dbj|AK042121.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.0
41gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's H... 40 7.0
42gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, r... 40 7.0
43gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, r... 40 7.0
44gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer ... 40 7.0
45gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, com... 40 7.0
46dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 7.0
47gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21... 40 7.0
48emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-4... 40 7.0
49emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chro... 40 7.0
50dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocyt... 40 7.0
51emb|X84046.1|MMHGFSF M.musculus mRNA for hepatocyte growth facto... 40 7.0
52gb|M37884.1|HUMSPC1 Human muscle beta spectrin mRNA, 3' end 40 7.0
53gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds 40 7.0
54dbj|D10213.1|MUSHGF2 Mouse mRNA for hepatocyte growth factor, co... 40 7.0
55dbj|D10212.1|MUSHGF1 Mouse mRNA for hepatocyte growth factor, co... 40 7.0
56gb|U00905.1|HSU00905 Human beta-spectrin (HSPTB1) gene, Humbspec... 40 7.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  446 bits (225), Expect = e-122
 Identities = 438/509 (86%)
 Strand = Plus / Plus

                                                                           
Query: 11      catctgaagacactgcagaaaaagaagccaaagccttcaaaaggaaaacatgatgctcaa 70
               |||||||||||||||||||| ||||| ||||||||| | ||||||||| |||||  ||||
Sbjct: 8653191 catctgaagacactgcagaagaagaaaccaaagcctcccaaaggaaaagatgatagtcaa 8653250

                                                                           
Query: 71      ggagaggaagcatttgttattgtagaagcatccaagttcaagagggttggaaggaagacc 130
               |||||||| || || ||| | || ||  ||||||||||||||||||||||||| ||||| 
Sbjct: 8653251 ggagaggaggccttcgttgtagtggagccatccaagttcaagagggttggaagaaagact 8653310

                                                                           
Query: 131     acattgcgtcaggatttggccaatgcccttgatataagggccttcgagaggacgacaaag 190
               || ||||| |||||  | || ||||||||||||||||| ||||| ||||  |||||||||
Sbjct: 8653311 accttgcggcaggaccttgctaatgcccttgatataagagcctttgagaaaacgacaaag 8653370

                                                                           
Query: 191     cttggccactgtgatgtcgagcttctgaggaaagagatgaatgagactgatgtccctgta 250
               ||||||| |||||| |  ||||||||||||||||||||||| ||||||||||||||  ||
Sbjct: 8653371 cttggccgctgtgacgcggagcttctgaggaaagagatgaacgagactgatgtccccata 8653430

                                                                           
Query: 251     tcgtactcaggcacgggcatcccagagaagtcgatcaggaaagcagctcttgaggttatt 310
               || ||||||||| | |||| |||||||||||| ||  ||||||||||||| |||||||||
Sbjct: 8653431 tcctactcaggcgctggcaacccagagaagtcaatacggaaagcagctctcgaggttatt 8653490

                                                                           
Query: 311     cttcgcaggctcctatctttcctcaagccagacaccttccagggtgcagtgaaggcaatg 370
               || | ||||||||||||||||||||||||||| ||||| |||||| | |||||||| || 
Sbjct: 8653491 ctccacaggctcctatctttcctcaagccagatacctttcagggttctgtgaaggcgatt 8653550

                                                                           
Query: 371     aatgaaagaattctctctgtccttgatgcttctggctctggccgcgttgatctcgggatg 430
               || |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 8653551 aacgaaagaatcctctccgtccttgatgcctctggttctggccgtgttgaccttgggatg 8653610

                                                                           
Query: 431     ttctttgccatcattgctccaatctgttctggtccagtggataggcgcaagcgtgtcgtt 490
               |||||||| || || || ||||| ||||||||||| ||||||| ||||||||| || || 
Sbjct: 8653611 ttctttgctattatcgccccaatttgttctggtcctgtggataagcgcaagcgggttgtc 8653670

                                            
Query: 491     ttcgatgcactcctttggcgtcctgcaag 519
               || |||||||| ||||||||||| |||||
Sbjct: 8653671 tttgatgcacttctttggcgtccggcaag 8653699
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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score =  446 bits (225), Expect = e-122
 Identities = 438/509 (86%)
 Strand = Plus / Plus

                                                                          
Query: 11     catctgaagacactgcagaaaaagaagccaaagccttcaaaaggaaaacatgatgctcaa 70
              |||||||||||||||||||| ||||| ||||||||| | ||||||||| |||||  ||||
Sbjct: 134163 catctgaagacactgcagaagaagaaaccaaagcctcccaaaggaaaagatgatagtcaa 134222

                                                                          
Query: 71     ggagaggaagcatttgttattgtagaagcatccaagttcaagagggttggaaggaagacc 130
              |||||||| || || ||| | || ||  ||||||||||||||||||||||||| ||||| 
Sbjct: 134223 ggagaggaggccttcgttgtagtggagccatccaagttcaagagggttggaagaaagact 134282

                                                                          
Query: 131    acattgcgtcaggatttggccaatgcccttgatataagggccttcgagaggacgacaaag 190
              || ||||| |||||  | || ||||||||||||||||| ||||| ||||  |||||||||
Sbjct: 134283 accttgcggcaggaccttgctaatgcccttgatataagagcctttgagaaaacgacaaag 134342

                                                                          
Query: 191    cttggccactgtgatgtcgagcttctgaggaaagagatgaatgagactgatgtccctgta 250
              ||||||| |||||| |  ||||||||||||||||||||||| ||||||||||||||  ||
Sbjct: 134343 cttggccgctgtgacgcggagcttctgaggaaagagatgaacgagactgatgtccccata 134402

                                                                          
Query: 251    tcgtactcaggcacgggcatcccagagaagtcgatcaggaaagcagctcttgaggttatt 310
              || ||||||||| | |||| |||||||||||| ||  ||||||||||||| |||||||||
Sbjct: 134403 tcctactcaggcgctggcaacccagagaagtcaatacggaaagcagctctcgaggttatt 134462

                                                                          
Query: 311    cttcgcaggctcctatctttcctcaagccagacaccttccagggtgcagtgaaggcaatg 370
              || | ||||||||||||||||||||||||||| ||||| |||||| | |||||||| || 
Sbjct: 134463 ctccacaggctcctatctttcctcaagccagatacctttcagggttctgtgaaggcgatt 134522

                                                                          
Query: 371    aatgaaagaattctctctgtccttgatgcttctggctctggccgcgttgatctcgggatg 430
              || |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 134523 aacgaaagaatcctctccgtccttgatgcctctggttctggccgtgttgaccttgggatg 134582

                                                                          
Query: 431    ttctttgccatcattgctccaatctgttctggtccagtggataggcgcaagcgtgtcgtt 490
              |||||||| || || || ||||| ||||||||||| ||||||| ||||||||| || || 
Sbjct: 134583 ttctttgctattatcgccccaatttgttctggtcctgtggataagcgcaagcgggttgtc 134642

                                           
Query: 491    ttcgatgcactcctttggcgtcctgcaag 519
              || |||||||| ||||||||||| |||||
Sbjct: 134643 tttgatgcacttctttggcgtccggcaag 134671
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  446 bits (225), Expect = e-122
 Identities = 438/509 (86%)
 Strand = Plus / Plus

                                                                           
Query: 11      catctgaagacactgcagaaaaagaagccaaagccttcaaaaggaaaacatgatgctcaa 70
               |||||||||||||||||||| ||||| ||||||||| | ||||||||| |||||  ||||
Sbjct: 8651026 catctgaagacactgcagaagaagaaaccaaagcctcccaaaggaaaagatgatagtcaa 8651085

                                                                           
Query: 71      ggagaggaagcatttgttattgtagaagcatccaagttcaagagggttggaaggaagacc 130
               |||||||| || || ||| | || ||  ||||||||||||||||||||||||| ||||| 
Sbjct: 8651086 ggagaggaggccttcgttgtagtggagccatccaagttcaagagggttggaagaaagact 8651145

                                                                           
Query: 131     acattgcgtcaggatttggccaatgcccttgatataagggccttcgagaggacgacaaag 190
               || ||||| |||||  | || ||||||||||||||||| ||||| ||||  |||||||||
Sbjct: 8651146 accttgcggcaggaccttgctaatgcccttgatataagagcctttgagaaaacgacaaag 8651205

                                                                           
Query: 191     cttggccactgtgatgtcgagcttctgaggaaagagatgaatgagactgatgtccctgta 250
               ||||||| |||||| |  ||||||||||||||||||||||| ||||||||||||||  ||
Sbjct: 8651206 cttggccgctgtgacgcggagcttctgaggaaagagatgaacgagactgatgtccccata 8651265

                                                                           
Query: 251     tcgtactcaggcacgggcatcccagagaagtcgatcaggaaagcagctcttgaggttatt 310
               || ||||||||| | |||| |||||||||||| ||  ||||||||||||| |||||||||
Sbjct: 8651266 tcctactcaggcgctggcaacccagagaagtcaatacggaaagcagctctcgaggttatt 8651325

                                                                           
Query: 311     cttcgcaggctcctatctttcctcaagccagacaccttccagggtgcagtgaaggcaatg 370
               || | ||||||||||||||||||||||||||| ||||| |||||| | |||||||| || 
Sbjct: 8651326 ctccacaggctcctatctttcctcaagccagatacctttcagggttctgtgaaggcgatt 8651385

                                                                           
Query: 371     aatgaaagaattctctctgtccttgatgcttctggctctggccgcgttgatctcgggatg 430
               || |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 8651386 aacgaaagaatcctctccgtccttgatgcctctggttctggccgtgttgaccttgggatg 8651445

                                                                           
Query: 431     ttctttgccatcattgctccaatctgttctggtccagtggataggcgcaagcgtgtcgtt 490
               |||||||| || || || ||||| ||||||||||| ||||||| ||||||||| || || 
Sbjct: 8651446 ttctttgctattatcgccccaatttgttctggtcctgtggataagcgcaagcgggttgtc 8651505

                                            
Query: 491     ttcgatgcactcctttggcgtcctgcaag 519
               || |||||||| ||||||||||| |||||
Sbjct: 8651506 tttgatgcacttctttggcgtccggcaag 8651534
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>dbj|AK121215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089O12, full
            insert sequence
          Length = 3172

 Score =  446 bits (225), Expect = e-122
 Identities = 438/509 (86%)
 Strand = Plus / Plus

                                                                        
Query: 11   catctgaagacactgcagaaaaagaagccaaagccttcaaaaggaaaacatgatgctcaa 70
            |||||||||||||||||||| ||||| ||||||||| | ||||||||| |||||  ||||
Sbjct: 1756 catctgaagacactgcagaagaagaaaccaaagcctcccaaaggaaaagatgatagtcaa 1815

                                                                        
Query: 71   ggagaggaagcatttgttattgtagaagcatccaagttcaagagggttggaaggaagacc 130
            |||||||| || || ||| | || ||  ||||||||||||||||||||||||| ||||| 
Sbjct: 1816 ggagaggaggccttcgttgtagtggagccatccaagttcaagagggttggaagaaagact 1875

                                                                        
Query: 131  acattgcgtcaggatttggccaatgcccttgatataagggccttcgagaggacgacaaag 190
            || ||||| |||||  | || ||||||||||||||||| ||||| ||||  |||||||||
Sbjct: 1876 accttgcggcaggaccttgctaatgcccttgatataagagcctttgagaaaacgacaaag 1935

                                                                        
Query: 191  cttggccactgtgatgtcgagcttctgaggaaagagatgaatgagactgatgtccctgta 250
            ||||||| |||||| |  ||||||||||||||||||||||| ||||||||||||||  ||
Sbjct: 1936 cttggccgctgtgacgcggagcttctgaggaaagagatgaacgagactgatgtccccata 1995

                                                                        
Query: 251  tcgtactcaggcacgggcatcccagagaagtcgatcaggaaagcagctcttgaggttatt 310
            || ||||||||| | |||| |||||||||||| ||  ||||||||||||| |||||||||
Sbjct: 1996 tcctactcaggcgctggcaacccagagaagtcaatacggaaagcagctctcgaggttatt 2055

                                                                        
Query: 311  cttcgcaggctcctatctttcctcaagccagacaccttccagggtgcagtgaaggcaatg 370
            || | ||||||||||||||||||||||||||| ||||| |||||| | |||||||| || 
Sbjct: 2056 ctccacaggctcctatctttcctcaagccagatacctttcagggttctgtgaaggcgatt 2115

                                                                        
Query: 371  aatgaaagaattctctctgtccttgatgcttctggctctggccgcgttgatctcgggatg 430
            || |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 2116 aacgaaagaatcctctccgtccttgatgcctctggttctggccgtgttgaccttgggatg 2175

                                                                        
Query: 431  ttctttgccatcattgctccaatctgttctggtccagtggataggcgcaagcgtgtcgtt 490
            |||||||| || || || ||||| ||||||||||| ||||||| ||||||||| || || 
Sbjct: 2176 ttctttgctattatcgccccaatttgttctggtcctgtggataagcgcaagcgggttgtc 2235

                                         
Query: 491  ttcgatgcactcctttggcgtcctgcaag 519
            || |||||||| ||||||||||| |||||
Sbjct: 2236 tttgatgcacttctttggcgtccggcaag 2264
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>gb|BT017489.1| Zea mays clone EL01N0413B02.c mRNA sequence
          Length = 1134

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 51  aaggaaaacatgatgctcaaggag 74
           ||||||||||||||||||||||||
Sbjct: 654 aaggaaaacatgatgctcaaggag 677
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>gb|AY596558.1| Saccharum officinarum clone SCVPRT2074F10, complete sequence
          Length = 1366

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 51  aaggaaaacatgatgctcaaggag 74
           ||||||||||||||||||||||||
Sbjct: 498 aaggaaaacatgatgctcaaggag 475
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>gb|AY104704.1| Zea mays PCO133361 mRNA sequence
          Length = 1333

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 51  aaggaaaacatgatgctcaaggag 74
           ||||||||||||||||||||||||
Sbjct: 856 aaggaaaacatgatgctcaaggag 879
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>gb|AY105502.1| Zea mays PCO135520 mRNA sequence
          Length = 835

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 44  ccttcaaaaggaaaacatgatgctcaa 70
           |||||| ||||||||||||||||||||
Sbjct: 276 ccttcataaggaaaacatgatgctcaa 302
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>gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete sequence
          Length = 130213

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 35     aagccaaagccttcaaaaggaa 56
              ||||||||||||||||||||||
Sbjct: 103774 aagccaaagccttcaaaaggaa 103795
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>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence
          Length = 219769

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 89     attgtagaagcatccaagttcaagag 114
              |||||||| |||||||||||||||||
Sbjct: 134483 attgtagatgcatccaagttcaagag 134458
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 46       ttcaaaaggaaaacatgatgctcaag 71
                ||||||||||||||||||||| ||||
Sbjct: 13838787 ttcaaaaggaaaacatgatgcacaag 13838762
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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 46    ttcaaaaggaaaacatgatgctcaag 71
             ||||||||||||||||||||| ||||
Sbjct: 88271 ttcaaaaggaaaacatgatgcacaag 88246
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 24      tgcagaaaaagaagccaaagc 44
               |||||||||||||||||||||
Sbjct: 1624996 tgcagaaaaagaagccaaagc 1625016
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>ref|XM_416901.1| PREDICTED: Gallus gallus similar to Rev1S (LOC418704), mRNA
          Length = 2280

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 285 tcaggaaagcagctcttgaggttat 309
           |||||||||||||||| ||||||||
Sbjct: 641 tcaggaaagcagctctggaggttat 665
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>gb|AC121852.4| Mus musculus chromosome 3 clone RP24-93P18, complete sequence
          Length = 206414

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 368   atgaatgaaagaattctctct 388
             |||||||||||||||||||||
Sbjct: 46860 atgaatgaaagaattctctct 46840
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>gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, complete sequence
          Length = 173940

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 26     cagaaaaagaagccaaagccttcaa 50
              |||||||||||| ||||||||||||
Sbjct: 156530 cagaaaaagaaggcaaagccttcaa 156506
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>gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, complete sequence
          Length = 205323

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    atgaatgaaagaattctctct 388
              |||||||||||||||||||||
Sbjct: 202048 atgaatgaaagaattctctct 202028
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>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin
            (LOC452970), mRNA
          Length = 7365

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 6351 gaggaaagagatgaatgaga 6370
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>gb|AC117812.9| Mus musculus chromosome 5, clone RP24-571E8, complete sequence
          Length = 127532

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tgaatgagactgatgtccct 247
              ||||||||||||||||||||
Sbjct: 126669 tgaatgagactgatgtccct 126650
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>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
            clinical type I) (SPTB), transcript variant 1, mRNA
          Length = 10064

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 6024 gaggaaagagatgaatgaga 6043
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>ref|NM_010427.2| Mus musculus hepatocyte growth factor (Hgf), mRNA
          Length = 2757

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  tgaatgagactgatgtccct 247
            ||||||||||||||||||||
Sbjct: 1004 tgaatgagactgatgtccct 1023
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>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
            clinical type I) (SPTB), transcript variant 2, mRNA
          Length = 6695

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 6024 gaggaaagagatgaatgaga 6043
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>gb|AY623113.1| Homo sapiens origin recognition complex, subunit 3-like (yeast) (ORC3L)
             gene, complete cds
          Length = 81082

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    gaggaagcatttgttattgt 93
             ||||||||||||||||||||
Sbjct: 39739 gaggaagcatttgttattgt 39758
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>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence
          Length = 177231

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gacaaagcttggccactgtg 203
              ||||||||||||||||||||
Sbjct: 166788 gacaaagcttggccactgtg 166807
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>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence
          Length = 157001

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgaatgagactgatgtccct 247
             ||||||||||||||||||||
Sbjct: 94215 tgaatgagactgatgtccct 94234
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>gb|AC116420.8| Mus musculus chromosome 1, clone RP24-141B16, complete sequence
          Length = 191497

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    gaaagaattctctctgtccttgat 397
              ||||||| ||||||||||||||||
Sbjct: 167308 gaaagaactctctctgtccttgat 167285
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>gb|AC113511.7| Mus musculus chromosome 1, clone RP23-378O19, complete sequence
          Length = 223985

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    gaaagaattctctctgtccttgat 397
              ||||||| ||||||||||||||||
Sbjct: 204158 gaaagaactctctctgtccttgat 204181
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>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence
          Length = 234330

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    cactgcagaaaaagaagccaaagc 44
             |||| |||||||||||||||||||
Sbjct: 97169 cactacagaaaaagaagccaaagc 97192
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>emb|AL451126.18| Human DNA sequence from clone RP11-106G15 on chromosome 6 Contains the
             5' end of a gene for a novel protein similar to
             arginyl-tRNA synthetase (arginine-tRNA ligase, EC
             6.1.1.19) and the 5' end of the ORC3L gene for origin
             recognition complex, subunit 3-like (yeast), complete
             sequence
          Length = 106700

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    gaggaagcatttgttattgt 93
             ||||||||||||||||||||
Sbjct: 85187 gaggaagcatttgttattgt 85206
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>emb|AL354773.8| Human DNA sequence from clone RP5-855L24 on chromosome 20 Contains part
             of the C20orf133 gene, complete sequence
          Length = 117609

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   aaagagatgaatgagactga 240
             ||||||||||||||||||||
Sbjct: 98022 aaagagatgaatgagactga 98041
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>gb|AF013185.1|AH005869S14 Homo sapiens beta-spectrin (HSpTB1) gene, exon 29
          Length = 250

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gaggaaagagatgaatgaga 236
           ||||||||||||||||||||
Sbjct: 134 gaggaaagagatgaatgaga 153
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>emb|X72307.1|MMHGF M.musculus mRNA for hepatocyte growth factor
          Length = 2320

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgaatgagactgatgtccct 247
           ||||||||||||||||||||
Sbjct: 942 tgaatgagactgatgtccct 961
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>emb|X59511.1|HSBSPEC3 H.sapiens mRNA for beta-spectrin (3' partial)
          Length = 954

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gaggaaagagatgaatgaga 236
           ||||||||||||||||||||
Sbjct: 246 gaggaaagagatgaatgaga 265
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    ttgccatcattgctccaatc 454
              ||||||||||||||||||||
Sbjct: 261008 ttgccatcattgctccaatc 261027
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>emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on chromosome 11 Contains the
              Lcp2 gene for lymphocyte cytosolic protein 2,  the 5' end
              of a novel gene and a novel gene, complete sequence
          Length = 186087

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     agaagccaaagccttcaaaa 52
              ||||||||||||||||||||
Sbjct: 110568 agaagccaaagccttcaaaa 110549
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>gb|AC011462.4| Homo sapiens chromosome 19 clone CTC-435M10, complete sequence
          Length = 148841

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     gatgctcaaggagaggaagc 81
              ||||||||||||||||||||
Sbjct: 127288 gatgctcaaggagaggaagc 127307
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>gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, complete sequence
          Length = 159791

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ccaaagccttcaaaaggaaa 57
             ||||||||||||||||||||
Sbjct: 63974 ccaaagccttcaaaaggaaa 63993
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>gb|AF465439.1| Homo sapiens beta I spectrin form betaI sigma3 mRNA, partial cds;
            alternatively spliced
          Length = 3456

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 1965 gaggaaagagatgaatgaga 1984
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>gb|S71816.1| hepatocyte growth factor [mice, liver, mRNA Partial, 2281 nt]
          Length = 2281

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgaatgagactgatgtccct 247
           ||||||||||||||||||||
Sbjct: 881 tgaatgagactgatgtccct 900
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>dbj|AK042121.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630060C16 product:hepatocyte growth
            factor, full insert sequence
          Length = 2757

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  tgaatgagactgatgtccct 247
            ||||||||||||||||||||
Sbjct: 1004 tgaatgagactgatgtccct 1023
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>gb|AC142129.4| Rattus norvegicus  BAC CH230-183M21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 215272

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tccttgatgcttctggctct 409
              ||||||||||||||||||||
Sbjct: 109253 tccttgatgcttctggctct 109234
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>gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, region 85D-85E, BAC clone
              BACR19N07, complete sequence
          Length = 176933

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     agccaaagccttcaaaagga 55
              ||||||||||||||||||||
Sbjct: 171779 agccaaagccttcaaaagga 171798
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>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone
             BACR30F01, complete sequence
          Length = 177028

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    agccaaagccttcaaaagga 55
             ||||||||||||||||||||
Sbjct: 45088 agccaaagccttcaaaagga 45107
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>gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112405

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   tctttcctcaagccagacac 345
             ||||||||||||||||||||
Sbjct: 13786 tctttcctcaagccagacac 13767
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>gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, complete sequence
          Length = 116803

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ccaaagccttcaaaaggaaa 57
             ||||||||||||||||||||
Sbjct: 14834 ccaaagccttcaaaaggaaa 14815
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    ttgccatcattgctccaatc 454
              ||||||||||||||||||||
Sbjct: 318130 ttgccatcattgctccaatc 318149
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>gb|AE003683.3| Drosophila melanogaster chromosome 3R, section 21 of 118 of the complete
              sequence
          Length = 243348

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     agccaaagccttcaaaagga 55
              ||||||||||||||||||||
Sbjct: 200946 agccaaagccttcaaaagga 200965
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>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171030

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   gaggaaagagatgaatgaga 236
             ||||||||||||||||||||
Sbjct: 64880 gaggaaagagatgaatgaga 64899
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>emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chromosome 17, complete
              sequence
          Length = 212052

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gacaaagcttggccactgtg 203
              ||||||||||||||||||||
Sbjct: 108632 gacaaagcttggccactgtg 108651
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>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes
            spherocytosis, clinical type I) variant protein
          Length = 7481

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 6113 gaggaaagagatgaatgaga 6132
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>emb|X84046.1|MMHGFSF M.musculus mRNA for hepatocyte growth factor/scatter factor
          Length = 2540

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgaatgagactgatgtccct 247
           ||||||||||||||||||||
Sbjct: 921 tgaatgagactgatgtccct 940
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>gb|M37884.1|HUMSPC1 Human muscle beta spectrin mRNA, 3' end
          Length = 4190

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 2808 gaggaaagagatgaatgaga 2827
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>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds
          Length = 6765

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggaaagagatgaatgaga 236
            ||||||||||||||||||||
Sbjct: 6065 gaggaaagagatgaatgaga 6084
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>dbj|D10213.1|MUSHGF2 Mouse mRNA for hepatocyte growth factor, complete cds
          Length = 2189

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgaatgagactgatgtccct 247
           ||||||||||||||||||||
Sbjct: 866 tgaatgagactgatgtccct 885
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>dbj|D10212.1|MUSHGF1 Mouse mRNA for hepatocyte growth factor, complete cds
          Length = 2204

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgaatgagactgatgtccct 247
           ||||||||||||||||||||
Sbjct: 881 tgaatgagactgatgtccct 900
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>gb|U00905.1|HSU00905 Human beta-spectrin (HSPTB1) gene, Humbspec.29 exon sequence
          Length = 301

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gaggaaagagatgaatgaga 236
           ||||||||||||||||||||
Sbjct: 134 gaggaaagagatgaatgaga 153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,253,195
Number of Sequences: 3902068
Number of extensions: 5253195
Number of successful extensions: 107551
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107328
Number of HSP's gapped (non-prelim): 219
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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