ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence 252 9e-64
2gb|AY105873.1| Zea mays PCO094136 mRNA sequence 252 9e-64
3ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predic... 236 6e-59
4dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 6e-59
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
6dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
7dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
8gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9,... 42 1.7
9gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosom... 42 1.7
10gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete se... 42 1.7
11gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome... 42 1.7
12emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chr... 42 1.7
13ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-co... 40 6.6
14gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, com... 40 6.6
15gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, comp... 40 6.6
16gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, co... 40 6.6
17gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete s... 40 6.6
18emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chr... 40 6.6
19emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 ... 40 6.6
20emb|AJ606381.1| Staphylococcus aureus partial spa gene for prote... 40 6.6
21emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in... 40 6.6
22gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, comp... 40 6.6
23ref|XM_684436.1| PREDICTED: Danio rerio similar to apoptosis-ind... 40 6.6
24ref|XM_680044.1| PREDICTED: Danio rerio similar to apoptosis-ind... 40 6.6
25gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 40 6.6
26gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, comp... 40 6.6
27emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 ... 40 6.6
28emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in... 40 6.6
29gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.64... 40 6.6
30emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 6.6 
>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score =  252 bits (127), Expect = 9e-64
 Identities = 271/319 (84%)
 Strand = Plus / Plus

                                                                        
Query: 22   aagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaatcggag 81
            |||||| ||||||||||||| ||||||||||||||||||||  |||  ||||||||||||
Sbjct: 1071 aagcatcttgttcagcttcgatctggccttccatcacatacacataggtttgaatcggag 1130

                                                                        
Query: 82   ttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaatataaa 141
            || || ||||| || || ||| || | || || || ||||||||||| || |||||||||
Sbjct: 1131 ttagtcgaagtagatctggaaaaggatccccaaatccatgttggtcccctcaaatataaa 1190

                                                                        
Query: 142  actgaagagcggcatcacaaacaggaactgaccccagccccagttttacctcttattgtt 201
            ||||| ||||| ||||| || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 1191 actgaggagcgtcatcaaaagcaggaactgaccccagcaccagtttttccgcttattgtt 1250

                                                                        
Query: 202  ggagtttctgttgttacagtcgtgatcagtatgccaaggttgaaggacttgtaccagagc 261
            ||||||||||| ||| || | |||||||||||||||||||| || ||||| |||||||||
Sbjct: 1251 ggagtttctgtggttgcactggtgatcagtatgccaaggttaaatgacttataccagagc 1310

                                                                        
Query: 262  gctgtaggaatgacttccctaagttcaggaaacacaccgagcagaaaggaaccacggaag 321
            |||||||| |||||||| ||  ||||||| |   |||||| || |||||| ||||| |||
Sbjct: 1311 gctgtagggatgacttctctgggttcagggatggcaccgaccaaaaaggagccacgcaag 1370

                               
Query: 322  acaatattgagaaagagag 340
            |  ||||| ||||||||||
Sbjct: 1371 aatatattaagaaagagag 1389
to top
>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score =  252 bits (127), Expect = 9e-64
 Identities = 271/319 (84%)
 Strand = Plus / Plus

                                                                       
Query: 22  aagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaatcggag 81
           |||||| ||||||||||||| ||||||||||||||||||||  |||  ||||||||||||
Sbjct: 257 aagcatcttgttcagcttcgatctggccttccatcacatacacataggtttgaatcggag 316

                                                                       
Query: 82  ttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaatataaa 141
           || || ||||| || || ||| || | || || || ||||||||||| || |||||||||
Sbjct: 317 ttagtcgaagtagatctggaaaaggatccccaaatccatgttggtcccctcaaatataaa 376

                                                                       
Query: 142 actgaagagcggcatcacaaacaggaactgaccccagccccagttttacctcttattgtt 201
           ||||| ||||| ||||| || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 377 actgaggagcgtcatcaaaagcaggaactgaccccagcaccagtttttccgcttattgtt 436

                                                                       
Query: 202 ggagtttctgttgttacagtcgtgatcagtatgccaaggttgaaggacttgtaccagagc 261
           ||||||||||| ||| || | |||||||||||||||||||| || ||||| |||||||||
Sbjct: 437 ggagtttctgtggttgcactggtgatcagtatgccaaggttaaatgacttataccagagc 496

                                                                       
Query: 262 gctgtaggaatgacttccctaagttcaggaaacacaccgagcagaaaggaaccacggaag 321
           |||||||| |||||||| ||  ||||||| |   |||||| || |||||| ||||| |||
Sbjct: 497 gctgtagggatgacttctctgggttcagggatggcaccgaccaaaaaggagccacgcaag 556

                              
Query: 322 acaatattgagaaagagag 340
           |  ||||| ||||||||||
Sbjct: 557 aatatattaagaaagagag 575
to top
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score =  236 bits (119), Expect = 6e-59
 Identities = 233/271 (85%)
 Strand = Plus / Plus

                                                                        
Query: 17   aaggaaagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaat 76
            ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| |||||| |
Sbjct: 3254 aaggaaagcatcttgttcagcttcgttctggtcttccatcacatacccatagatttgagt 3313

                                                                        
Query: 77   cggagttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaat 136
            | ||| | |||||||||||| | ||  |||||||||||||||||||||||||||||||||
Sbjct: 3314 cagagatagttgaagttgacttggacaagcaacctcagattcatgttggtcctcttaaat 3373

                                                                        
Query: 137  ataaaactgaagagcggcatcacaaacaggaactgaccccagccccagttttacctctta 196
            ||||||| |||||||| ||||||||||||||| | || |||||||| || || |||||||
Sbjct: 3374 ataaaaccgaagagcgacatcacaaacaggaattaactccagcccctgtatttcctctta 3433

                                                                        
Query: 197  ttgttggagtttctgttgttacagtcgtgatcagtatgccaaggttgaaggacttgtacc 256
            |||| |||||||| ||  || || | || ||||| ||||||||| | || ||||||||||
Sbjct: 3434 ttgtcggagtttccgtgattgcattggtcatcagcatgccaaggctaaaagacttgtacc 3493

                                           
Query: 257  agagcgctgtaggaatgacttccctaagttc 287
            | || ||||| ||||||||| ||||| ||||
Sbjct: 3494 aaagtgctgtgggaatgactaccctaggttc 3524
to top
>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full
            insert sequence
          Length = 1629

 Score =  236 bits (119), Expect = 6e-59
 Identities = 233/271 (85%)
 Strand = Plus / Plus

                                                                        
Query: 17   aaggaaagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaat 76
            ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| |||||| |
Sbjct: 913  aaggaaagcatcttgttcagcttcgttctggtcttccatcacatacccatagatttgagt 972

                                                                        
Query: 77   cggagttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaat 136
            | ||| | |||||||||||| | ||  |||||||||||||||||||||||||||||||||
Sbjct: 973  cagagatagttgaagttgacttggacaagcaacctcagattcatgttggtcctcttaaat 1032

                                                                        
Query: 137  ataaaactgaagagcggcatcacaaacaggaactgaccccagccccagttttacctctta 196
            ||||||| |||||||| ||||||||||||||| | || |||||||| || || |||||||
Sbjct: 1033 ataaaaccgaagagcgacatcacaaacaggaattaactccagcccctgtatttcctctta 1092

                                                                        
Query: 197  ttgttggagtttctgttgttacagtcgtgatcagtatgccaaggttgaaggacttgtacc 256
            |||| |||||||| ||  || || | || ||||| ||||||||| | || ||||||||||
Sbjct: 1093 ttgtcggagtttccgtgattgcattggtcatcagcatgccaaggctaaaagacttgtacc 1152

                                           
Query: 257  agagcgctgtaggaatgacttccctaagttc 287
            | || ||||| ||||||||| ||||| ||||
Sbjct: 1153 aaagtgctgtgggaatgactaccctaggttc 1183
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Minus

                                                                            
Query: 17       aaggaaagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaat 76
                ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| |||||| |
Sbjct: 11024626 aaggaaagcatcttgttcagcttcgttctggtcttccatcacatacccatagatttgagt 11024567

                                                                            
Query: 77       cggagttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaat 136
                | ||| | |||||||||||| | ||  |||||||||||||||||||||||||||||||||
Sbjct: 11024566 cagagatagttgaagttgacttggacaagcaacctcagattcatgttggtcctcttaaat 11024507

                                              
Query: 137      ataaaactgaagagcggcatcacaaacagg 166
                ||||||| |||||||| |||||||||||||
Sbjct: 11024506 ataaaaccgaagagcgacatcacaaacagg 11024477



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 247      gacttgtaccagagcgctgtaggaatgacttccctaagttc 287
                ||||||||||| || ||||| ||||||||| ||||| ||||
Sbjct: 11024010 gacttgtaccaaagtgctgtgggaatgactaccctaggttc 11023970



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                            
Query: 175      ccagccccagttttacctcttattgttggagtttctgttgttacagtcgtgatcagtatg 234
                |||||||| || || ||||||||||| |||||||| ||  || || | || ||||| |||
Sbjct: 11024176 ccagcccctgtatttcctcttattgtcggagtttccgtgattgcattggtcatcagcatg 11024117

                        
Query: 235      ccaaggtt 242
                ||||||||
Sbjct: 11024116 ccaaggtt 11024109
to top
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Minus

                                                                         
Query: 17    aaggaaagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaat 76
             ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| |||||| |
Sbjct: 53508 aaggaaagcatcttgttcagcttcgttctggtcttccatcacatacccatagatttgagt 53449

                                                                         
Query: 77    cggagttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaat 136
             | ||| | |||||||||||| | ||  |||||||||||||||||||||||||||||||||
Sbjct: 53448 cagagatagttgaagttgacttggacaagcaacctcagattcatgttggtcctcttaaat 53389

                                           
Query: 137   ataaaactgaagagcggcatcacaaacagg 166
             ||||||| |||||||| |||||||||||||
Sbjct: 53388 ataaaaccgaagagcgacatcacaaacagg 53359



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 247   gacttgtaccagagcgctgtaggaatgacttccctaagttc 287
             ||||||||||| || ||||| ||||||||| ||||| ||||
Sbjct: 52892 gacttgtaccaaagtgctgtgggaatgactaccctaggttc 52852



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 175   ccagccccagttttacctcttattgttggagtttctgttgttacagtcgtgatcagtatg 234
             |||||||| || || ||||||||||| |||||||| ||  || || | || ||||| |||
Sbjct: 53058 ccagcccctgtatttcctcttattgtcggagtttccgtgattgcattggtcatcagcatg 52999

                     
Query: 235   ccaaggtt 242
             ||||||||
Sbjct: 52998 ccaaggtt 52991
to top
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Minus

                                                                          
Query: 17     aaggaaagcattttgttcagcttcggtctggccttccatcacataccaatatatttgaat 76
              ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| |||||| |
Sbjct: 127468 aaggaaagcatcttgttcagcttcgttctggtcttccatcacatacccatagatttgagt 127409

                                                                          
Query: 77     cggagttggttgaagttgacctagaagagcaacctcagattcatgttggtcctcttaaat 136
              | ||| | |||||||||||| | ||  |||||||||||||||||||||||||||||||||
Sbjct: 127408 cagagatagttgaagttgacttggacaagcaacctcagattcatgttggtcctcttaaat 127349

                                            
Query: 137    ataaaactgaagagcggcatcacaaacagg 166
              ||||||| |||||||| |||||||||||||
Sbjct: 127348 ataaaaccgaagagcgacatcacaaacagg 127319



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 247    gacttgtaccagagcgctgtaggaatgacttccctaagttc 287
              ||||||||||| || ||||| ||||||||| ||||| ||||
Sbjct: 126852 gacttgtaccaaagtgctgtgggaatgactaccctaggttc 126812



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                          
Query: 175    ccagccccagttttacctcttattgttggagtttctgttgttacagtcgtgatcagtatg 234
              |||||||| || || ||||||||||| |||||||| ||  || || | || ||||| |||
Sbjct: 127018 ccagcccctgtatttcctcttattgtcggagtttccgtgattgcattggtcatcagcatg 126959

                      
Query: 235    ccaaggtt 242
              ||||||||
Sbjct: 126958 ccaaggtt 126951
to top
>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10
          Length = 1772

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 285 ttcaggaaacacaccgagcag 305
           |||||||||||||||||||||
Sbjct: 42  ttcaggaaacacaccgagcag 22
to top
>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence
          Length = 187416

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 197    ttgttggagtttctgttgtta 217
              |||||||||||||||||||||
Sbjct: 153756 ttgttggagtttctgttgtta 153736
to top
>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 464    tttgtaccattgttgactaatattt 488
              |||||| ||||||||||||||||||
Sbjct: 101319 tttgtaacattgttgactaatattt 101295
to top
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence
          Length = 200505

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 197    ttgttggagtttctgttgtta 217
              |||||||||||||||||||||
Sbjct: 170711 ttgttggagtttctgttgtta 170731
to top
>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete
             sequence
          Length = 126358

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   ttcaggaaacacaccgagcag 305
             |||||||||||||||||||||
Sbjct: 11140 ttcaggaaacacaccgagcag 11160
to top
>ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-containing protein
            (DDB0220518), partial mRNA
          Length = 9210

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 198  tgttggagtttctgttgttacagt 221
            |||||||||| |||||||||||||
Sbjct: 8862 tgttggagttactgttgttacagt 8839
to top
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ggaagacaatattgagaaag 336
             ||||||||||||||||||||
Sbjct: 11983 ggaagacaatattgagaaag 12002
to top
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ggaagacaatattgagaaag 336
              ||||||||||||||||||||
Sbjct: 195753 ggaagacaatattgagaaag 195772
to top
>gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, complete sequence
          Length = 232054

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    ttgacctagaagagcaacctcaga 115
             ||||||||||||||||||| ||||
Sbjct: 75398 ttgacctagaagagcaaccacaga 75421
to top
>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence
          Length = 114996

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   attcatgttggtcctcttaaatat 138
             |||||| |||||||||||||||||
Sbjct: 34821 attcattttggtcctcttaaatat 34798
to top
>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the
             5' end of the BTBD4 gene for BTB (POZ) domain containing
             4, part of a gene for a tissue plasminogen activator
             protein and two CpG islands, complete sequence
          Length = 41932

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   aaacacaccgagcagaaagg 310
             ||||||||||||||||||||
Sbjct: 12441 aaacacaccgagcagaaagg 12460
to top
>emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 in linkage group 21,
             complete sequence
          Length = 205143

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aaactgaagagcggcatcac 159
             ||||||||||||||||||||
Sbjct: 50910 aaactgaagagcggcatcac 50891
to top
>emb|AJ606381.1| Staphylococcus aureus partial spa gene for protein A, strain M3
          Length = 936

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 21 aaagcattttgttcagcttc 40
          ||||||||||||||||||||
Sbjct: 32 aaagcattttgttcagcttc 13
to top
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18,
              complete sequence
          Length = 164758

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    gagaaagagagcctgaaaca 349
              ||||||||||||||||||||
Sbjct: 128415 gagaaagagagcctgaaaca 128434
to top
>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence
          Length = 68440

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   gaaagagagcctgaaacata 351
             ||||||||||||||||||||
Sbjct: 64810 gaaagagagcctgaaacata 64829
to top
>ref|XM_684436.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like
           isoform 1 (LOC561033), partial mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 aaactgaagagcggcatcac 159
           ||||||||||||||||||||
Sbjct: 829 aaactgaagagcggcatcac 848
to top
>ref|XM_680044.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like
           isoform 2 (LOC557064), mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 aaactgaagagcggcatcac 159
           ||||||||||||||||||||
Sbjct: 898 aaactgaagagcggcatcac 917
to top
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    catcacaaacaggaactgac 173
              ||||||||||||||||||||
Sbjct: 106977 catcacaaacaggaactgac 106996
to top
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  gaaagagagcctgaaacata 351
            ||||||||||||||||||||
Sbjct: 2665 gaaagagagcctgaaacata 2684
to top
>emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 in linkage group 20,
              complete sequence
          Length = 159094

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    aaactgaagagcggcatcac 159
              ||||||||||||||||||||
Sbjct: 136416 aaactgaagagcggcatcac 136435
to top
>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gagaaagagagcctgaaaca 349
             ||||||||||||||||||||
Sbjct: 91207 gagaaagagagcctgaaaca 91226
to top
>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tcctcttaaatataaaactg 145
             ||||||||||||||||||||
Sbjct: 26643 tcctcttaaatataaaactg 26662
to top
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   accattgttgactaatattt 488
             ||||||||||||||||||||
Sbjct: 59710 accattgttgactaatattt 59691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,160,553
Number of Sequences: 3902068
Number of extensions: 5160553
Number of successful extensions: 89581
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89487
Number of HSP's gapped (non-prelim): 92
length of query: 489
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 467
effective length of database: 17,147,199,772
effective search space: 8007742293524
effective search space used: 8007742293524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top