ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 353 bits (178), Expect = 4e-94 Identities = 248/270 (91%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 219 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 278 Query: 341 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 400 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 279 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 338 Query: 401 caccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 460 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 339 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 398 Query: 461 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgcttcg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 399 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgc-tcg 457 Query: 521 gagaccgcggcaggttcgtcgacgagcagc 550 | ||||||||||| ||||||||||| |||| Sbjct: 458 gcgaccgcggcagcttcgtcgacgaccagc 487 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 152 tggcgctgttcggcaggtccaagaccaaggccgcgcc 188 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 572 tcggcttcaccaaggccaacgagctgttcgtcggccg 608
>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full insert sequence Length = 1055 Score = 353 bits (178), Expect = 4e-94 Identities = 248/270 (91%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363 Query: 341 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 400 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423 Query: 401 caccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 460 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483 Query: 461 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgcttcg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 484 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgc-tcg 542 Query: 521 gagaccgcggcaggttcgtcgacgagcagc 550 | ||||||||||| ||||||||||| |||| Sbjct: 543 gcgaccgcggcagcttcgtcgacgaccagc 572 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full insert sequence Length = 1057 Score = 353 bits (178), Expect = 4e-94 Identities = 248/270 (91%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 366 Query: 341 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 400 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 367 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 426 Query: 401 caccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 460 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 427 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 486 Query: 461 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgcttcg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 487 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgc-tcg 545 Query: 521 gagaccgcggcaggttcgtcgacgagcagc 550 | ||||||||||| ||||||||||| |||| Sbjct: 546 gcgaccgcggcagcttcgtcgacgaccagc 575 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 240 tggcgctgttcggcaggtccaagaccaaggccgcgcc 276 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 660 tcggcttcaccaaggccaacgagctgttcgtcggccg 696
>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full insert sequence Length = 1064 Score = 353 bits (178), Expect = 4e-94 Identities = 248/270 (91%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363 Query: 341 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 400 ||| |||||||| ||||| |||||| | || || |||||||||||| |||| |||||||| Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423 Query: 401 caccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 460 |||||| ||||| |||||| | ||||||||||| ||||| || ||||||||||||||||| Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483 Query: 461 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgcttcg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 484 ggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgc-tcg 542 Query: 521 gagaccgcggcaggttcgtcgacgagcagc 550 | ||||||||||| ||||||||||| |||| Sbjct: 543 gcgaccgcggcagcttcgtcgacgaccagc 572 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
>gb|AY104328.1| Zea mays PCO078649 mRNA sequence Length = 1252 Score = 331 bits (167), Expect = 1e-87 Identities = 293/334 (87%), Gaps = 7/334 (2%) Strand = Plus / Plus Query: 219 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 278 |||||||||||||| |||||| |||| |||||||||| ||||||| | |||||||||| Sbjct: 346 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 405 Query: 279 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 332 |||||| || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 406 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 465 Query: 333 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 392 ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| | | ||| Sbjct: 466 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 525 Query: 393 gaggccatcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatc 452 |||||||| ||||| ||||||||||| ||||||||||||| ||||| |||||||| ||| Sbjct: 526 gaggccattaccgggaagggcatccttgcccagctgaacctcgagacgggcatccccatc 585 Query: 453 tacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggc 512 |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 586 tacgaggcggagcctctcctcctgttcttcatcctcttcaccctccttggcgccatcggc 645 Query: 513 gcgcttcggagaccgcggcaggttcgtcgacgag 546 || | |||| ||||||||| | |||||||||||| Sbjct: 646 gctc-tcggggaccgcggccgcttcgtcgacgag 678
>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 323 bits (163), Expect = 3e-85 Identities = 292/334 (87%), Gaps = 7/334 (2%) Strand = Plus / Plus Query: 219 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 278 |||||||||||||| |||||| |||| |||||||||| ||||||| | |||||||||| Sbjct: 156 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 215 Query: 279 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 332 |||||| || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 216 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 275 Query: 333 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 392 ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| | | ||| Sbjct: 276 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 335 Query: 393 gaggccatcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatc 452 |||||||| ||||| ||||||||||| | ||||||||||| ||||| |||||||| ||| Sbjct: 336 gaggccattaccgggaagggcatccttgcgcagctgaacctggagacgggcatccccatc 395 Query: 453 tacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggc 512 ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 396 tacgaagcggaacccctcctcctgttcttcatcctcttcaccctccttggcgccatcggc 455 Query: 513 gcgcttcggagaccgcggcaggttcgtcgacgag 546 || | |||||||||||||| | |||||||||||| Sbjct: 456 gctc-tcggagaccgcggccgcttcgtcgacgag 488
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 232 bits (117), Expect = 1e-57 Identities = 160/173 (92%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 378 gcgtcgatcttgggagaggccatcaccggcaagggcatcctgtcccagctgaaccttgag 437 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 37692178 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 37692237 Query: 438 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 497 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37692238 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 37692297 Query: 498 ctcggcgccatcggcgcgcttcggagaccgcggcaggttcgtcgacgagcagc 550 ||||||||||||||||||| |||| ||||||||||| ||||||||||| |||| Sbjct: 37692298 ctcggcgccatcggcgcgc-tcggcgaccgcggcagcttcgtcgacgaccagc 37692349 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 37690702 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 37690761 Query: 341 gctcttcgtcggccgtgttgccatg 365 ||| |||||||| ||||| |||||| Sbjct: 37690762 gctgttcgtcgggcgtgtcgccatg 37690786 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 37690519 tggcgctgttcggcaggtccaagaccaaggccgcgcc 37690555 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 7516479 cctcctcctcttcttcatcctc 7516458 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 37692434 tcggcttcaccaaggccaacgagctgttcgtcggccg 37692470 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 400 tcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatccc 448 |||||||||||||| |||| ||||| ||| |||||||||||||||| Sbjct: 33384157 tcaccggcaagggcgccctggggcagctcaacattgagaccggcatccc 33384205 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gctcgcgctctcctcctcctcggc 175 ||||||| |||||||||||||||| Sbjct: 29416860 gctcgcggtctcctcctcctcggc 29416883
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 232 bits (117), Expect = 1e-57 Identities = 160/173 (92%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 378 gcgtcgatcttgggagaggccatcaccggcaagggcatcctgtcccagctgaaccttgag 437 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 152652 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 152711 Query: 438 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 497 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152712 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 152771 Query: 498 ctcggcgccatcggcgcgcttcggagaccgcggcaggttcgtcgacgagcagc 550 ||||||||||||||||||| |||| ||||||||||| ||||||||||| |||| Sbjct: 152772 ctcggcgccatcggcgcgc-tcggcgaccgcggcagcttcgtcgacgaccagc 152823 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151176 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 151235 Query: 341 gctcttcgtcggccgtgttgccatg 365 ||| |||||||| ||||| |||||| Sbjct: 151236 gctgttcgtcgggcgtgtcgccatg 151260 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 150993 tggcgctgttcggcaggtccaagaccaaggccgcgcc 151029 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 152908 tcggcttcaccaaggccaacgagctgttcgtcggccg 152944
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 232 bits (117), Expect = 1e-57 Identities = 160/173 (92%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 378 gcgtcgatcttgggagaggccatcaccggcaagggcatcctgtcccagctgaaccttgag 437 ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| ||| Sbjct: 20479 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 20538 Query: 438 accggcatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 497 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20539 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctc 20598 Query: 498 ctcggcgccatcggcgcgcttcggagaccgcggcaggttcgtcgacgagcagc 550 ||||||||||||||||||| |||| ||||||||||| ||||||||||| |||| Sbjct: 20599 ctcggcgccatcggcgcgc-tcggcgaccgcggcagcttcgtcgacgaccagc 20650 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 281 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 340 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19003 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 19062 Query: 341 gctcttcgtcggccgtgttgccatg 365 ||| |||||||| ||||| |||||| Sbjct: 19063 gctgttcgtcgggcgtgtcgccatg 19087 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 217 tggccctgttcggcaagtccaagaccaaggccgcgcc 253 |||| |||||||||| ||||||||||||||||||||| Sbjct: 18820 tggcgctgttcggcaggtccaagaccaaggccgcgcc 18856 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgtcggccg 355 |||| |||||||||| |||||||| ||||||||||| Sbjct: 20735 tcggcttcaccaaggccaacgagctgttcgtcggccg 20771
>ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 168 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 227 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 228 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 287 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 288 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 347 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 348 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 398 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 509 tcgggttcaccaaggcgaacgagctcttcgt 539 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 588 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 647 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 648 gatcgagccgctcctcctcttcaacatcctcttc 681
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 35372522 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 35372581 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 35372582 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 35372641 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 35372642 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 35372701 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 35372702 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 35372752 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 35372863 tcgggttcaccaaggcgaacgagctcttcgt 35372893 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 35372942 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 35373001 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 35373002 gatcgagccgctcctcctcttcaacatcctcttc 35373035 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gctcgcgctctcctcctcctcg 173 |||||||||||||||||||||| Sbjct: 26671091 gctcgcgctctcctcctcctcg 26671112 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcc 498 |||||||||| || ||||| |||||||||||| Sbjct: 21803246 cctcctcctcatcatcatcgtcttcaccctcc 21803277 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ctcgcgctctcctcctcctc 172 |||||||||||||||||||| Sbjct: 13677175 ctcgcgctctcctcctcctc 13677194
>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa protein of photosystem II precursor, complete cds Length = 1108 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 316 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 375 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 376 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 435 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 436 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 495 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 496 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 546 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 657 tcgggttcaccaaggcgaacgagctcttcgt 687 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 736 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 795 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 796 gatcgagccgctcctcctcttcaacatcctcttc 829
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 168366 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 168425 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 168426 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 168485 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 168486 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 168545 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 168546 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 168596 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 168707 tcgggttcaccaaggcgaacgagctcttcgt 168737 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 168786 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 168845 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 168846 gatcgagccgctcctcctcttcaacatcctcttc 168879
>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full insert sequence Length = 1116 Score = 196 bits (99), Expect = 5e-47 Identities = 198/231 (85%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 332 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 391 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | | ||||| ||||||| Sbjct: 392 cgtggggagggtggccatgctggggttcgcggcgtccctcctcagcgaggcggtcaccgg 451 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 452 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 511 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 512 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 562 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 673 tcgggttcaccaaggcgaacgagctcttcgt 703 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 752 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 811 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 812 gatcgagccgctcctcctcttcaacatcctcttc 845
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 196 bits (99), Expect = 5e-47 Identities = 198/231 (85%) Strand = Plus / Plus Query: 287 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 346 ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || || Sbjct: 4352 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgaactgtt 4411 Query: 347 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 406 ||| || | || |||||| | || ||||| ||||| || | || ||||| ||||||| Sbjct: 4412 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 4471 Query: 407 caagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 466 ||||||||||||| | ||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 4472 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 4531 Query: 467 cctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgct 517 || ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 4532 gctgctcctcttcttcatcctcttcacgctgctgggcgccatcggcgcgct 4582 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 319 tcggtttcaccaaggagaacgagctcttcgt 349 |||| |||||||||| ||||||||||||||| Sbjct: 4693 tcgggttcaccaaggcgaacgagctcttcgt 4723 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Plus Query: 398 catcaccggcaagggcatcctgtcccagctgaaccttgagaccggcatcccgatctacga 457 ||||||||| |||||| ||| | ||||| ||| | ||||||||| |||| ||| |||| Sbjct: 4772 catcaccgggaagggcgcgctggcgcagctcaacatcgagaccggcgtccccatcaacga 4831 Query: 458 ggcggagcccctcctcctcttcttcatcctcttc 491 | ||||| |||||||||||| |||||||||| Sbjct: 4832 gatcgagccgctcctcctcttcaacatcctcttc 4865
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 490 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 7553031 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 7552985
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 490 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 131345 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 131299
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctctt 490 |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 58441 atcccgatctacgaggtggagcccctcctcatcttcttcatcctctt 58395
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggc 503 ||||| ||||| |||| |||||| ||||||||||| |||| ||||||||||||||||||| Sbjct: 154363 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 154422 Query: 504 gccat 508 |||| Sbjct: 154423 accat 154427
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggc 503 ||||| ||||| |||| |||||| ||||||||||| |||| ||||||||||||||||||| Sbjct: 13239 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 13298 Query: 504 gccat 508 |||| Sbjct: 13299 accat 13303
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 444 atcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggc 503 ||||| ||||| |||| |||||| ||||||||||| |||| ||||||||||||||||||| Sbjct: 4643896 atcccaatctatgaggtggagcctctcctcctcttgttcaacctcttcaccctcctcggc 4643955 Query: 504 gccat 508 |||| Sbjct: 4643956 accat 4643960
>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence Length = 161504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||||| ||||||| Sbjct: 38489 tcctcctcttcttcatcctcttcatcctcctc 38520
>ref|XM_987483.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC671507), mRNA Length = 1254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||||| ||||||| Sbjct: 701 tcctcctcttcttcatcctcttcatcctcctc 670
>ref|XM_986380.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC666836), mRNA Length = 1254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||||| ||||||| Sbjct: 701 tcctcctcttcttcatcctcttcatcctcctc 670
>emb|AL450463.20| Human DNA sequence from clone RP13-299C14 on chromosome 20, complete sequence Length = 27854 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| |||||||| |||||||| Sbjct: 27160 cccctcctcctcttcttcctcctcttccccctcctc 27195
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||||||||||||||||||| |||| Sbjct: 41783 cctcctcctcttcttcatcctcttcatcctc 41813
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||||| Sbjct: 24503 cccctcctcctcttcttcatcctcttc 24529
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||||||||| |||||||||||||| Sbjct: 960794 cctcctcctcttcttcctcctcttcaccctc 960764
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||| |||||||| ||||| Sbjct: 1251092 cctcctcctcttcttcatcttcttcaccgtcctc 1251125
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||| ||| ||||||| Sbjct: 228827 cctcctcctcttcttcatcctcatcatcctcctc 228794 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctc 488 |||||||||||||||||||| Sbjct: 233411 tcctcctcttcttcatcctc 233392
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||| ||||||||| |||||||||||||||| Sbjct: 105181 cctcctcatcttcttcaccctcttcaccctcctc 105214 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||| ||||||||| |||||||||||||||| Sbjct: 105139 cctcctcatcttcttcaccctcttcaccctcctc 105172 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||| ||||||||| |||||||||||||||| Sbjct: 105097 cctcctcatcttcttcaccctcttcaccctcctc 105130 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcct 499 ||||||| ||||||||| ||||||||||||||| Sbjct: 105307 cctcctcatcttcttcaccctcttcaccctcct 105339 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcct 499 ||||||| ||||||||| ||||||||||||||| Sbjct: 105265 cctcctcatcttcttcaccctcttcaccctcct 105297 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 ||||||| ||||||||| ||||||||||||| Sbjct: 105223 cctcctcatcttcttcaccctcttcaccctc 105253
>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4, complete sequence Length = 92140 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 471 ctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||| ||||||| Sbjct: 41924 ctcctcttcttcatcctcttcatcctcctc 41953
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttc 491 |||||||||||||||||||||||||| Sbjct: 79816 ccctcctcctcttcttcatcctcttc 79841
>ref|XM_641716.1| Dictyostelium discoideum nucleomorphin (DDB0231257), partial mRNA Length = 1023 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 430 cctcctcctcttcttcatcctcttc 406
>gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93599 IMAGE:7132958), complete cds Length = 2256 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 659 tcctcctcttcctcatcctcttcatcctcctcg 627
>gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:72533 IMAGE:5623285), complete cds Length = 1214 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 647 tcctcctcttcctcatcctcttcatcctcctcg 615
>gb|AF140042.2| Dictyostelium discoideum putative calmodulin-binding protein CaM-BP38 mRNA, complete cds Length = 1557 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 916 cctcctcctcttcttcatcctcttc 892
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 23761 cctcctcctcttcttcatcctcttc 23785 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||| |||||||| ||||||| Sbjct: 227060 ctcctcctcttcttcctcctcttcttcctcctc 227092
>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence Length = 172853 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 97038 tcctcctcttcctcatcctcttcatcctcctcg 97070
>ref|XM_380871.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00695.1) partial mRNA Length = 1965 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 1666 cctcctcctcttcttcatcctcttc 1642
>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence Length = 180177 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 42152 cctcctcctcttcttcatcctcttc 42128
>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence Length = 173042 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 124355 tcctcctcttcctcatcctcttcatcctcctcg 124387
>emb|X00271.1|RNGCRY Rat gene for lens gamma-crystallin (gamma 3-1) Length = 3425 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||| |||||||| |||||||| Sbjct: 1473 ctcctcctcttcttcctcctcttctccctcctc 1505
>ref|XM_573095.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC497907), mRNA Length = 1297 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 722 tcctcctcttcctcatcctcttcatcctcctcg 690
>ref|XM_575891.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC500530), mRNA Length = 1226 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 725 tcctcctcttcctcatcctcttcatcctcctcg 693
>ref|XM_345376.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC366086), mRNA Length = 1410 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 1367 tcctcctcttcctcatcctcttcatcctcctcg 1335
>ref|XM_574476.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (LOC499183), mRNA Length = 2295 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 734 tcctcctcttcctcatcctcttcatcctcctcg 702
>ref|XM_574383.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC499092), mRNA Length = 1269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 703 tcctcctcttcctcatcctcttcatcctcctcg 671
>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence Length = 166967 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 155814 tcctcctcttcctcatcctcttcatcctcctcg 155782
>gb|AF275734.1|AF275734 Rattus norvegicus amphoterin mRNA, complete cds Length = 1245 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 691 tcctcctcttcctcatcctcttcatcctcctcg 659
>gb|AY631855.1| Dictyostelium discoideum nucleomorphin B (numB) mRNA, complete cds Length = 2318 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 1678 cctcctcctcttcttcatcctcttc 1654
>ref|NG_005431.1| Mus musculus high mobility group protein 1-like (LOC433238) pseudogene on chromosome 19 Length = 1463 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 821 tcctcctcttcctcatcctcttcatcctcctcg 789
>emb|Y00463.1|RNHMG1 Rat mRNA for high mobility group protein HMG1 Length = 825 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 629 tcctcctcttcctcatcctcttcatcctcctcg 597
>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence Length = 241046 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||||| Sbjct: 181080 cctcctcctcttcttcatcctcttc 181104
>gb|BC088402.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93598 IMAGE:7128547), complete cds Length = 1361 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 735 tcctcctcttcctcatcctcttcatcctcctcg 703
>ref|NM_012963.2| Rattus norvegicus high mobility group box 1 (Hmgb1), mRNA Length = 2256 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 659 tcctcctcttcctcatcctcttcatcctcctcg 627
>gb|M63852.1|SYNHMG1 Rat high mobility group 1 protein synthetic gene, complete cds Length = 924 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 690 tcctcctcttcctcatcctcttcatcctcctcg 658
>gb|M19359.1|RATCRYG Rat gamma-crystallin gene cluster, encoding gamma-A (gamma 1-1), gamma-B (gamma 1-2), gamma-C (gamma 2-1), gamma-D (gamma 2-2), and gamma-E (gamma 3-1) crystallins, complete cds Length = 54670 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||| |||||||| |||||||| Sbjct: 48699 ctcctcctcttcttcctcctcttctccctcctc 48731
>gb|M64986.1|RATAMPHO Rat amphoterin mRNA, complete cds Length = 1225 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctcg 501 ||||||||||| |||||||||||| |||||||| Sbjct: 724 tcctcctcttcctcatcctcttcatcctcctcg 692
>ref|XM_633380.1| Dictyostelium discoideum hypothetical protein (DDB0186138), partial mRNA Length = 1221 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttca 492 |||||||||||||||||||||||| Sbjct: 1172 tcctcctcttcttcatcctcttca 1149
>gb|AC107704.8| Mus musculus chromosome 7, clone RP24-121L4, complete sequence Length = 194458 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 16794 tcctcctcttcctcatcctcttcatcctcctc 16763
>gb|BC083067.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103168 IMAGE:5372544), complete cds Length = 1252 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 677 tcctcctcttcctcatcctcttcatcctcctc 646
>gb|BC085090.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103169 IMAGE:6485915), complete cds Length = 1283 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 710 tcctcctcttcctcatcctcttcatcctcctc 679
>gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, complete sequence Length = 179268 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| ||||| || |||||||| Sbjct: 120887 cccctcctcctcttcttcctcctcctccccctcctc 120852
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence Length = 220916 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| |||||||| |||||||| Sbjct: 188734 tcctcctcttcttcctcctcttccccctcctc 188765
>gb|AC136923.6| Mus musculus chromosome 18, clone RP24-331G12, complete sequence Length = 177390 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| |||||||| |||||||| Sbjct: 8481 tcctcctcttcttcgtcctcttccccctcctc 8512
>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence Length = 165774 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 108561 tcctcctcttcctcatcctcttcatcctcctc 108592
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence Length = 136224 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||||| ||||||| Sbjct: 14635 tcctcctcttcttcatcctcttcttcctcctc 14604 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| || ||||| ||||||| Sbjct: 14684 cccctcctcctcttcttcttcttcttcttcctcctc 14649
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 134358 tcctcctcttcctcatcctcttcatcctcctc 134327
>ref|NM_010439.2| Mus musculus high mobility group box 1 (Hmgb1), mRNA Length = 2309 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 755 tcctcctcttcctcatcctcttcatcctcctc 724
>gb|AC120006.12| Mus musculus chromosome 19, clone RP24-176M2, complete sequence Length = 181007 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 160454 tcctcctcttcctcatcctcttcatcctcctc 160485
>ref|NG_005439.2| Mus musculus high mobility group protein 1-like (LOC629372) pseudogene on chromosome 19 Length = 1439 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 804 tcctcctcttcctcatcctcttcatcctcctc 773
>ref|NG_005430.2| Mus musculus high mobility group box 1 (Hmgb1) pseudogene (LOC654442) on chromosome 11 Length = 836 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 699 tcctcctcttcctcatcctcttcatcctcctc 668
>gb|AC135509.2| Mus musculus BAC clone RP24-448I12 from chromosome 17, complete sequence Length = 141307 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 130414 tcctcctcttcctcatcctcttcatcctcctc 130445
>ref|NM_020090.1| Rattus norvegicus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 3550 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||| ||||||||||||||| ||||||| Sbjct: 2895 tcctcctcctcttcatcctcttcatcctcctc 2864
>ref|XM_451900.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B08305g predicted mRNA Length = 2208 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||||| ||||||| Sbjct: 1523 tcctcctcttcttcatcctcttcttcctcctc 1492
>ref|XM_001005031.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC677578), mRNA Length = 1451 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 710 tcctcctcttcctcatcctcttcatcctcctc 679
>ref|XM_982299.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 542 tcctcctcttcctcatcctcttcatcctcctc 511
>ref|XM_358238.5| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 567 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 539 tcctcctcttcctcatcctcttcatcctcctc 508
>ref|XM_910188.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 567 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 539 tcctcctcttcctcatcctcttcatcctcctc 508
>ref|XR_003222.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC640060), mRNA Length = 1293 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 753 tcctcctcttcctcatcctcttcatcctcctc 722
>ref|XM_884320.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619937), mRNA Length = 1267 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 708 tcctcctcttcctcatcctcttcatcctcctc 677
>ref|XM_914398.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC638385), mRNA Length = 1260 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 701 tcctcctcttcctcatcctcttcatcctcctc 670
>ref|XM_977875.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC669902), mRNA Length = 1269 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 709 tcctcctcttcctcatcctcttcatcctcctc 678
>ref|XM_976550.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC669692), mRNA Length = 2060 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 710 tcctcctcttcctcatcctcttcatcctcctc 679
>ref|XR_003080.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||| | ||||||| Sbjct: 604 tcctcctcttcttcatcctctttatcctcctc 573
>ref|XR_004825.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||| | ||||||| Sbjct: 604 tcctcctcttcttcatcctctttatcctcctc 573
>ref|XR_003871.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC623634), mRNA Length = 835 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 789 tcctcctcttcctcatcctcttcatcctcctc 758
>gb|BC064790.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:76709 IMAGE:30019980), complete cds Length = 1612 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 1039 tcctcctcttcctcatcctcttcatcctcctc 1008
>gb|AC132093.3| Mus musculus BAC clone RP24-506H13 from chromosome 10, complete sequence Length = 148364 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| |||||||| ||||||| Sbjct: 73251 cccctcctcctcttcttcttcctcttcctcctcctc 73286
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| |||||||| ||||||| Sbjct: 138826 cccctcctcctcttcttcctcctcttcttcctcctc 138861
>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence Length = 186218 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccct 496 |||||||||||| ||||| ||||||||||||| Sbjct: 84489 cccctcctcctcctcttcctcctcttcaccct 84520
>gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome 19, complete sequence Length = 171122 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 88024 tcctcctcttcctcatcctcttcatcctcctc 87993
>gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complete sequence Length = 211208 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 25213 tcctcctcttcctcatcctcttcatcctcctc 25182
>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9, complete sequence Length = 103882 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 473 cctcttcttcatcctcttcaccctcctc 500 |||||||||| ||||||||||||||||| Sbjct: 29616 cctcttcttcttcctcttcaccctcctc 29589
>ref|XM_719825.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04596) partial mRNA Length = 3090 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||| ||||||| Sbjct: 1826 tcctcctcttcttcatcttcttcatcctcctc 1795
>emb|CR674345.2|CNS0FJAN Tetraodon nigroviridis full-length cDNA Length = 1153 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| ||||| |||||||||||||| Sbjct: 593 tcctcctcttcctcatcttcttcaccctcctc 562
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| |||||||| ||||||| Sbjct: 30329 cccctcctcctcttcttcctcctcttcttcctcctc 30364
>gb|AC158764.4| Mus musculus chromosome 1, clone RP24-248C2, complete sequence Length = 165228 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 74951 tcctcctcttcctcatcctcttcatcctcctc 74982
>gb|AC161211.21| Mus musculus chromosome 7, clone RP23-74O12, complete sequence Length = 188863 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 176374 tcctcctcttcctcatcctcttcatcctcctc 176343
>gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, complete sequence Length = 193682 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| |||||||| |||||||| Sbjct: 68069 tcctcctcttcttcctcctcttccccctcctc 68100
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||||| ||||||| Sbjct: 739489 tcctcctcttcttcatcctcttcttcctcctc 739458
>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete sequence Length = 145052 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 24851 tcctcctcttcctcatcctcttcatcctcctc 24882
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||||| ||||||| Sbjct: 198613 cccctcctcctcttctgcatcctcttcctcctcctc 198648 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 154842 tcctcctcttcctcatcctcttcatcctcctc 154873
>gb|AC153153.4| Mus musculus BAC clone RP23-79G18 from chromosome 13, complete sequence Length = 222383 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 217043 tcctcctcttcctcatcctcttcatcctcctc 217074 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctcttc 491 ||||||||||||||| |||||||| Sbjct: 140376 ctcctcctcttcttcctcctcttc 140399
>emb|AL954336.3| Mouse DNA sequence from clone RP23-223H19 on chromosome 11 Contains a high mobility group box 1 (Hmgb1) pseudogene, a novel gene and two CpG islands, complete sequence Length = 117391 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 35831 tcctcctcttcctcatcctcttcatcctcctc 35800
>gb|BC006586.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:8044 IMAGE:3587109), complete cds Length = 1266 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 691 tcctcctcttcctcatcctcttcatcctcctc 660
>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete sequence Length = 198624 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||||| ||||||| Sbjct: 111674 cccctcctcctcttctgcatcctcttcctcctcctc 111709 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 67905 tcctcctcttcctcatcctcttcatcctcctc 67936
>gb|BC008565.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:8033 IMAGE:3586745), complete cds Length = 2333 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 729 tcctcctcttcctcatcctcttcatcctcctc 698
>dbj|AK144428.1| Mus musculus 21 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:G630066L18 product:high mobility group box 1, full insert sequence Length = 2816 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 730 tcctcctcttcctcatcctcttcatcctcctc 699
>dbj|AK146420.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730085H08 product:high mobility group box 1, full insert sequence Length = 2252 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 700 tcctcctcttcctcatcctcttcatcctcctc 669
>dbj|AK134228.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830495F02 product:high mobility group box 1, full insert sequence Length = 1047 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 492 tcctcctcttcctcatcctcttcatcctcctc 461
>dbj|AK150924.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018F21 product:high mobility group box 1, full insert sequence Length = 1316 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 758 tcctcctcttcctcatcctcttcatcctcctc 727
>dbj|AK157846.1| Mus musculus erythroblast cDNA, RIKEN full-length enriched library, clone:K0C0023A12 product:high mobility group box 1, full insert sequence Length = 2309 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 755 tcctcctcttcctcatcctcttcatcctcctc 724
>dbj|AK166007.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730029D20 product:high mobility group box 1, full insert sequence Length = 1264 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 709 tcctcctcttcctcatcctcttcatcctcctc 678
>dbj|AK084841.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330050N16 product:high mobility group box 1, full insert sequence Length = 2309 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 755 tcctcctcttcctcatcctcttcatcctcctc 724
>dbj|AK051800.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130095O09 product:high mobility group box 1, full insert sequence Length = 1235 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 680 tcctcctcttcctcatcctcttcatcctcctc 649
>dbj|AK087949.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430001G07 product:high mobility group box 1, full insert sequence Length = 1274 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 723 tcctcctcttcctcatcctcttcatcctcctc 692
>dbj|AK037928.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130064K11 product:high mobility group box 1, full insert sequence Length = 928 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 789 tcctcctcttcctcatcctcttcatcctcctc 758
>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence Length = 228458 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 207701 tcctcctcttcctcatcctcttcatcctcctc 207732
>dbj|AK033880.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330109A19 product:unclassifiable, full insert sequence Length = 3445 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 1343 tcctcctcttcctcatcctcttcatcctcctc 1374
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 143727 tcctcctcttcctcatcctcttcatcctcctc 143758
>gb|AC121140.7| Mus musculus chromosome 8, clone RP23-429G12, complete sequence Length = 201440 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 170509 tcctcctcttcctcatcctcttcatcctcctc 170540
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||||| ||||||| Sbjct: 19103 tcctcctcttcttcatcctcttcttcctcctc 19134 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| || ||||| ||||||| Sbjct: 19054 cccctcctcctcttcttcttcttcttcttcctcctc 19089
>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence Length = 199782 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| |||||||| |||||||| Sbjct: 128648 tcctcctcttcttcctcctcttccccctcctc 128679
>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete sequence Length = 132103 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 8764 tcctcctcttcctcatcctcttcatcctcctc 8795
>gb|AF176688.1|AF176688 Rattus norvegicus sodium/calcium/potassium exchanger NCKX1 (SLC24A1) mRNA, complete cds Length = 3550 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||| ||||||||||||||| ||||||| Sbjct: 2895 tcctcctcctcttcatcctcttcatcctcctc 2864
>gb|AC131177.9| Mus musculus chromosome 1, clone RP23-374I10, complete sequence Length = 189761 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 137008 tcctcctcttcctcatcctcttcatcctcctc 137039
>gb|BC091741.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103167 IMAGE:4987137), complete cds Length = 867 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 714 tcctcctcttcctcatcctcttcatcctcctc 683
>emb|AL831780.12| Mouse DNA sequence from clone RP23-394B8 on chromosome 2, complete sequence Length = 173444 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 69793 tcctcctcttcctcatcctcttcatcctcctc 69824
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||||||| | ||||||| Sbjct: 183490 tcctcctcttcttcatcctctttatcctcctc 183521
>emb|Y00365.1|CHHMG1 Chinese hamster HMG-1 gene for high mobility group protein 1 Length = 2058 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 497 tcctcctcttcctcatcctcttcatcctcctc 466
>emb|X80457.1|MMHMG1 M.musculus HMG1 gene Length = 2547 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 2130 tcctcctcttcctcatcctcttcatcctcctc 2099
>gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds Length = 1845 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||||||||||||||||||| Sbjct: 1247 ccctcctcctcttcttcatcctct 1224 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||||||||||||||||||| Sbjct: 1175 ccctcctcctcttcttcatcctct 1152 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||||||||||||||||||| Sbjct: 1151 ccctcctcctcttcttcatcctct 1128 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||||||||||||||||||| Sbjct: 953 ccctcctcctcttcttcatcctct 930 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||| || ||||||| Sbjct: 902 tcctcctcttcttcatcctctccatcctcctc 871 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctct 489 ||||||||||||||||||||| Sbjct: 1196 tcctcctcttcttcatcctct 1176 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| || ||| ||||||| Sbjct: 1493 tcctcctcttcttcatcatcctcatcctcctc 1462 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| || || |||||||| Sbjct: 1469 tcctcctcttcttcatcatcctctccctcctc 1438 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||| ||||||||||||||| Sbjct: 1295 ccctcctcttcttcttcatcctct 1272 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 ||||||||||||||||| |||||| Sbjct: 1271 ccctcctcctcttcttcctcctct 1248 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatc 485 |||||||||||||||||||| Sbjct: 1127 ccctcctcctcttcttcatc 1108 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatc 485 |||||||||||||||||||| Sbjct: 1103 ccctcctcctcttcttcatc 1084 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatc 485 |||||||||||||||||||| Sbjct: 1079 ccctcctcctcttcttcatc 1060 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 ||||||| |||||||||||||||| Sbjct: 1025 ccctcctgctcttcttcatcctct 1002 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 |||||||| ||||||||||||||| Sbjct: 1001 ccctcctcttcttcttcatcctct 978 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 ||||||||||||||||| |||||| Sbjct: 977 ccctcctcctcttcttcctcctct 954 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctct 489 ||||||||||||||||| |||||| Sbjct: 734 ccctcctcctcttcttcgtcctct 711
>gb|BC111468.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117896 IMAGE:4215684), complete cds Length = 2258 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 680 tcctcctcttcctcatcctcttcatcctcctc 649
>gb|BC110667.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117897 IMAGE:5036554), complete cds Length = 1731 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 1166 tcctcctcttcctcatcctcttcatcctcctc 1135
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete sequences Length = 190116 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctc 488 |||||||||||||||||||||||| Sbjct: 135530 cccctcctcctcttcttcatcctc 135553
>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence Length = 160295 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccct 496 |||||||||||| ||||| ||||||||||||| Sbjct: 137191 cccctcctcctcctcttcctcctcttcaccct 137222
>gb|BC100312.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117529 IMAGE:30849071), complete cds Length = 1325 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 732 tcctcctcttcctcatcctcttcatcctcctc 701
>gb|BC094030.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103166 IMAGE:4952464), complete cds Length = 1346 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 744 tcctcctcttcctcatcctcttcatcctcctc 713
>gb|AC112266.6| Mus musculus BAC clone RP23-422B6 from 13, complete sequence Length = 190943 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 161448 tcctcctcttcctcatcctcttcatcctcctc 161479 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctcttc 491 ||||||||||||||| |||||||| Sbjct: 84781 ctcctcctcttcttcctcctcttc 84804
>gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial cds; chloroplast Length = 479 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 462 gagcccctcctcctcttcttcatcctcttcac 493 ||||| |||||||| ||||||||||||||||| Sbjct: 115 gagccactcctccttttcttcatcctcttcac 146
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||||||||| ||||||| Sbjct: 155157 tcctcctcttcttcatcctcttcttcctcctc 155188 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||||| || ||||| ||||||| Sbjct: 155108 cccctcctcctcttcttcttcttcttcttcctcctc 155143
>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence Length = 221010 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| |||||||| |||||||| Sbjct: 95173 tcctcctcttcttcctcctcttccccctcctc 95204
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence Length = 190373 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctc 488 |||||||||||||||||||||||| Sbjct: 74672 cccctcctcctcttcttcatcctc 74649
>gb|AC154809.2| Mus musculus BAC clone RP24-528G7 from chromosome 16, complete sequence Length = 191524 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||| ||||||||||| ||| ||||||| Sbjct: 108147 cccctcctcctcctcttcatcctcctcatcctcctc 108112
>emb|AL845504.8| Mouse DNA sequence from clone RP23-297M18 on chromosome 2, complete sequence Length = 160295 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 81314 tcctcctcttcctcatcctcttcatcctcctc 81345
>emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on chromosome X, complete sequence Length = 177087 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 32084 tcctcctcttcctcatcctcttcatcctcctc 32115
>gb|L38477.1|MUSHMG1HOM Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1) mRNA, complete cds Length = 1225 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 675 tcctcctcttcctcatcctcttcatcctcctc 644
>emb|Z11997.1|MMNHCHMG1 M.musculus mRNA for non-histone chromosomal high-mobility group 1 protein Length = 2231 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 674 tcctcctcttcctcatcctcttcatcctcctc 643
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||| ||||||||| ||||||| Sbjct: 93226 tcctcctcttcttcctcctcttcatcctcctc 93195
>gb|AC121505.14| Mus musculus chromosome 8, clone RP24-144M14, complete sequence Length = 163953 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 21874 tcctcctcttcctcatcctcttcatcctcctc 21905
>gb|AC170753.7| Mus musculus BAC RP24-547D11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 234156 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 186482 tcctcctcttcgtcatcctcttcatcctcctc 186513
>gb|U00431.1|U00431 Mus musculus HMG-1 mRNA, complete cds Length = 1308 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| |||||||||||| ||||||| Sbjct: 747 tcctcctcttcctcatcctcttcatcctcctc 716
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 170493 tcctcctcttcttcatcctcttc 170515
>ref|XM_629830.1| Dictyostelium discoideum hypothetical protein (DDB0184227), partial mRNA Length = 933 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 472 tcctcttcttcatcctcttcacc 494 ||||||||||||||||||||||| Sbjct: 53 tcctcttcttcatcctcttcacc 31
>ref|XM_511962.1| PREDICTED: Pan troglodytes LOC455219 (LOC455219), mRNA Length = 2259 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 655 cctcctcctcttcttcctcctcttcac 629
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctc 488 ||||||||||||||||||||||| Sbjct: 58404 ccctcctcctcttcttcatcctc 58426 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 58314 cctcctcctcttcttcatcctc 58335 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctc 488 |||||||||||||||||| ||||| Sbjct: 58453 cccctcctcctcttcttcctcctc 58476
>ref|XM_516261.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC460151), mRNA Length = 3756 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1825 cctcctcctcatcttcatcctcctcaccctc 1795
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 32237 tcctcctcttcttcatcctcttc 32215
>gb|AY752997.1| Penaeus monodon clone ct108 microsatellite sequence Length = 679 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctct 489 ||||||||||||||||||||||| Sbjct: 347 cctcctcctcttcttcatcctct 369
>gb|AC131980.9| Mus musculus chromosome 1, clone RP24-170O7, complete sequence Length = 200100 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| | || |||||||||||| Sbjct: 116250 ccctcctcctcttcttccttcttttcaccctcctc 116216
>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence Length = 186990 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttcaccctcct 499 ||||||||||| |||||||||||| |||||| Sbjct: 37806 tcctcctcttcctcatcctcttcatcctcct 37836
>ref|NM_003412.3| Homo sapiens Zic family member 1 (odd-paired homolog, Drosophila) (ZIC1), mRNA Length = 5231 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||||| ||||||| Sbjct: 596 ccctcctcctcttcttcctcctcttcctcctcctc 630
>gb|AC141888.4| Mus musculus BAC clone RP23-462H3 from chromosome 19, complete sequence Length = 185192 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 470 cctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||| |||||||| |||||||| Sbjct: 139913 cctcctcttcttcctcctcttctccctcctc 139883
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| ||||| || |||||||| Sbjct: 38338 ccctcctcctcttcttcctcctcctctccctcctc 38304
>ref|NM_015670.3| Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 3 (SENP3), mRNA Length = 2425 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 515 cctcctcctcttcttcctcctcttcac 489
>ref|NM_004634.2| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1), transcript variant 2, mRNA Length = 4710 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1816 cctcctcctcatcttcatcctcctcaccctc 1786
>ref|NM_001003694.1| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1), transcript variant 1, mRNA Length = 4728 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1816 cctcctcctcatcttcatcctcctcaccctc 1786
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctctt 490 ||||||||||||||||||||||| Sbjct: 62588 ctcctcctcttcttcatcctctt 62610
>gb|BC080658.1| Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 3, mRNA (cDNA clone MGC:90205 IMAGE:6155941), complete cds Length = 2425 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 515 cctcctcctcttcttcctcctcttcac 489
>ref|XM_001001990.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcct 499 ||||||||||| |||||||||||| |||||| Sbjct: 709 tcctcctcttcctcatcctcttcatcctcct 679
>ref|XM_485920.3| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcct 499 ||||||||||| |||||||||||| |||||| Sbjct: 709 tcctcctcttcctcatcctcttcatcctcct 679
>ref|XM_916659.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttcaccctcct 499 ||||||||||| |||||||||||| |||||| Sbjct: 709 tcctcctcttcctcatcctcttcatcctcct 679
>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence Length = 206377 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||| ||||| |||||||| |||||||| Sbjct: 73661 ccctcctcctcctcttcctcctcttctccctcctc 73627
>gb|BC032613.1| Homo sapiens cDNA clone IMAGE:5555330, **** WARNING: chimeric clone **** Length = 3530 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 51 cctcctcctcttcttcctcctcttcac 25
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctc 488 ||||||||||||||||||||||| Sbjct: 165148 ccctcctcctcttcttcatcctc 165170 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 165058 cctcctcctcttcttcatcctc 165079 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctc 488 |||||||||||||||||| ||||| Sbjct: 165197 cccctcctcctcttcttcctcctc 165220
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence Length = 218688 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||||| ||||||| Sbjct: 79702 ccctcctcctcttcttcctcctcttcctcctcctc 79736 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttc 491 |||||||||||||||| |||||||| Sbjct: 79727 cctcctcctcttcttcctcctcttc 79751 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctctt 490 |||||||||||||||| ||||||| Sbjct: 79565 cctcctcctcttcttcctcctctt 79588
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 103473 cccctcctcctcttcttcttcctcttc 103499
>gb|AC122001.2| Mus musculus BAC clone RP24-330I1 from chromosome 7, complete sequence Length = 155051 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 ctcctcctcttcttcatcctctt 490 ||||||||||||||||||||||| Sbjct: 106795 ctcctcctcttcttcatcctctt 106817
>gb|AC122195.4| Mus musculus BAC clone RP23-49D1 from 8, complete sequence Length = 204335 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||| ||||||||||| |||||||| |||||||| Sbjct: 134124 ccctcttcctcttcttcctcctcttccccctcctc 134158
>ref|NM_024133.2| Rattus norvegicus huntingtin-associated protein 1 (Hap1), transcript variant 1, mRNA Length = 3633 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||| |||||||| |||||||||||| ||||||| Sbjct: 716 ccctcttcctcttcctcatcctcttcatcctcctc 682
>ref|NM_177982.1| Rattus norvegicus huntingtin-associated protein 1 (Hap1), transcript variant 2, mRNA Length = 3126 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||| |||||||| |||||||||||| ||||||| Sbjct: 716 ccctcttcctcttcctcatcctcttcatcctcctc 682
>gb|AY211044.1| Tribolium castaneum strain cSM microsatellite sequence Length = 264 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctct 489 ||||||||||||||||||||||| Sbjct: 178 cctcctcctcttcttcatcctct 156
>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence Length = 228160 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 216064 tcctcctcttcttcatcctcttc 216042
>gb|BC068262.1| Homo sapiens cDNA clone IMAGE:5272879, containing frame-shift errors Length = 4719 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1817 cctcctcctcatcttcatcctcctcaccctc 1787
>gb|AC115452.4| Rattus norvegicus 7 BAC CH230-309G3 (Children's Hospital Oakland Research Institute) complete sequence Length = 169133 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 78175 cccctcctcctcttcttcctcctcttc 78201
>ref|XM_967760.1| PREDICTED: Tribolium castaneum similar to Fms interacting protein (LOC661609), mRNA Length = 2118 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctct 489 ||||||||||||||||||||||| Sbjct: 983 cctcctcctcttcttcatcctct 961
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| ||||| || |||||||| Sbjct: 207753 ccctcctcctcttcttcctcctcctctccctcctc 207787
>emb|AL713696.1|HSM803056 Homo sapiens mRNA; cDNA DKFZp547C058 (from clone DKFZp547C058) Length = 4539 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1646 cctcctcctcatcttcatcctcctcaccctc 1616
>emb|AL834294.1|HSM805332 Homo sapiens mRNA; cDNA DKFZp762A152 (from clone DKFZp762A152) Length = 2269 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 327 cctcctcctcttcttcctcctcttcac 301
>emb|CR626749.1| full-length cDNA clone CS0DK002YD13 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2433 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 570 cctcctcctcttcttcctcctcttcac 544
>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 204302 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 ctcctcctcttcttcatcctctt 490 ||||||||||||||||||||||| Sbjct: 75629 ctcctcctcttcttcatcctctt 75607
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 26572 cccctcctcctcttcttcttcctcttc 26598
>dbj|AB071078.1| Macaca fascicularis testis cDNA clone:QtsA-16933, similar to human tripartite motif-containing 37 protein (TRIM37), mRNA, NM_001005207 Length = 2712 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 ctcctcctcttcttcatcctctt 490 ||||||||||||||||||||||| Sbjct: 1031 ctcctcctcttcttcatcctctt 1009
>gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179714 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||||| ||||||| Sbjct: 108760 ccctcctcctcttcttcctcctcttcctcctcctc 108726
>gb|AY008763.1| Homo sapiens sentrin/SUMO-specific protease (SENP3) mRNA, complete cds Length = 2224 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 301 cctcctcctcttcttcctcctcttcac 275
>ref|NM_001003618.1| Danio rerio zgc:100960 (zgc:100960), mRNA Length = 1330 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 408 tcctcctcttcttcatcctcttc 386
>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223830 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttcaccctcct 499 |||||||||||| ||||||||||| || ||||||| Sbjct: 103297 cccctcctcctcctcttcatcctcctccccctcct 103263
>gb|AF176815.1|AF176815 Homo sapiens putative 8-hydroxyguanine DNA glycosylase gene, complete cds Length = 51803 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 31959 cctcctcctcatcttcatcctcctcaccctc 31929
>gb|BC078314.1| Danio rerio zgc:100960, mRNA (cDNA clone MGC:100960 IMAGE:7147354), complete cds Length = 1330 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 408 tcctcctcttcttcatcctcttc 386
>gb|BC053851.1| Homo sapiens bromodomain and PHD finger containing, 1, transcript variant 1, mRNA (cDNA clone MGC:61492 IMAGE:6140996), complete cds Length = 4599 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1810 cctcctcctcatcttcatcctcctcaccctc 1780
>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence Length = 136754 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 135161 tcctcctcttcttcatcctcttc 135139
>emb|Z71559.1|SCYNL283C S.cerevisiae chromosome XIV reading frame ORF YNL283c Length = 3584 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 2047 tcctcctcttcttcatcctcttc 2025
>gb|DQ332622.1| Synthetic construct Saccharomyces cerevisiae clone FLH201648.01X WSC2 gene, complete sequence Length = 1512 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 tcctcctcttcttcatcctcttc 491 ||||||||||||||||||||||| Sbjct: 547 tcctcctcttcttcatcctcttc 569
>gb|U38373.1|RNU38373 Rattus norvegicus huntingtin associated protein (rHAP1-A) mRNA, complete cds Length = 3708 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||| |||||||| |||||||||||| ||||||| Sbjct: 731 ccctcttcctcttcctcatcctcttcatcctcctc 697
>gb|U38370.1|RNU38370 Rattus norvegicus huntingtin associated protein (rHAP1-B) mRNA, complete cds, alternatively spliced form Length = 3201 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||| |||||||| |||||||||||| ||||||| Sbjct: 731 ccctcttcctcttcctcatcctcttcatcctcctc 697
>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete sequence Length = 90243 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 61677 cccctcctcctcttcttcttcctcttc 61651
>emb|AJ891053.1| Clethrionomys glareolus partial adrab2 gene for alpha 2B adrenergic receptor Length = 1173 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 cctcctcttcttcatcctcttca 492 ||||||||||||||||||||||| Sbjct: 873 cctcctcttcttcatcctcttca 851
>gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complete sequence Length = 157757 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 107275 cccctcctcctcttcttcctcctcttc 107249
>gb|BC036374.1| Homo sapiens cDNA clone IMAGE:4821313, containing frame-shift errors Length = 4589 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1822 cctcctcctcatcttcatcctcctcaccctc 1792
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| ||||| || |||||||| Sbjct: 7442 ccctcctcctcttcttcctcctcctctccctcctc 7476 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcct 487 |||||||||||||||||||||| Sbjct: 143255 ccctcctcctcttcttcatcct 143276
>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence Length = 167842 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 53373 cccctcctcctcttcttcctcctcttc 53347
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete sequence Length = 206806 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 59068 cccctcctcctcttcttcctcctcttc 59042
>gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p, complete sequence Length = 185067 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 95714 cctcctcctcatcttcatcctcctcaccctc 95744
>gb|M91585.1|HUMPRGRN Human Br140 mRNA, complete cds Length = 4320 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctc 497 |||||||||| ||||||||||| |||||||| Sbjct: 1445 cctcctcctcatcttcatcctcctcaccctc 1415
>gb|AF199459.1| Homo sapiens SUMO-1 specific protease 3 (SUSP3) mRNA, complete cds Length = 2258 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 320 cctcctcctcttcttcctcctcttcac 294
>emb|AL670464.12| Mouse DNA sequence from clone RP23-12I24 on chromosome 4, complete sequence Length = 203558 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||||| ||||||| Sbjct: 175281 ccctcctcctcttcttcctcctcttcttcctcctc 175247
>emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chromosome 2, complete sequence Length = 184583 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctcttc 491 ||||||||||||||||||||| ||||| Sbjct: 19784 cccctcctcctcttcttcatcttcttc 19758
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctcttc 491 |||||||||||||||||| |||||||| Sbjct: 67811 cccctcctcctcttcttcctcctcttc 67837
>gb|AC016876.10| Homo sapiens chromosome 17, clone RP11-186B7, complete sequence Length = 60268 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcac 493 |||||||||||||||| |||||||||| Sbjct: 31048 cctcctcctcttcttcctcctcttcac 31074
>dbj|D76435.1|HUMZICP Homo sapiens mRNA for Zic protein, complete cds Length = 3138 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||||||| |||||||| ||||||| Sbjct: 657 ccctcctcctcttcttcctcctcttcctcctcctc 691
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 122562 cctcctcctcttcttcctcctcttcctcctcctc 122595
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||| || |||||||| |||||||| Sbjct: 16218 cctcctcctcttcctcttcctcttccccctcctc 16251
>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence Length = 206083 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||| ||||||||||||||||| ||||||| Sbjct: 99863 cctcctcttcttcttcatcctcttcttcctcctc 99830
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence Length = 132061 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 128602 cctcctcctcttcttcctcctcttcttcctcctc 128635
>gb|AC138265.9| Mus musculus chromosome 5, clone RP23-41J13, complete sequence Length = 172279 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 143583 cctcctcctcttcttcctcctcttcttcctcctc 143550
>ref|NM_188668.1| Oryza sativa (japonica cultivar-group), Ozsa8271 predicted mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 166 cctcctcctcttcttcatcctc 145
>ref|XM_630713.1| Dictyostelium discoideum structure-specific recognition protein 1 (DDB0216434), partial mRNA Length = 1584 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||| |||| ||||||||||| ||||||| Sbjct: 643 cctcctccttttctgcatcctcttcatcctcctc 610
>ref|XM_531426.1| PREDICTED: Pan troglodytes similar to Homo sapiens C21orf63 isoform B protein,variant1 (LOC473956), mRNA Length = 1471 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 1058 cctcctcctcttcttcatcctc 1037
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| ||||| || |||||||| Sbjct: 55821 cctcctcctcttcttcctcctcctctccctcctc 55788 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| ||||| || |||||||| Sbjct: 55776 cctcctcctcttcttcctcctcctctccctcctc 55743
>ref|XM_509001.1| PREDICTED: Pan troglodytes kinesin family member 21A (LOC451832), mRNA Length = 3282 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 298 cctcctcctcttcttcatcctc 277
>ref|NM_177977.1| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 2, mRNA Length = 3981 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 821 cctcctcctcttcttcatcctc 800
>ref|NM_003949.2| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 1, mRNA Length = 4084 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 821 cctcctcctcttcttcatcctc 800
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 43050 cctcctcctcttcttcctcctcttcctcctcctc 43083
>gb|BC054732.1| Mus musculus gametogenetin binding protein 1, mRNA (cDNA clone MGC:64749 IMAGE:5709552), complete cds Length = 5028 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| ||| |||| |||||||| Sbjct: 3226 cctcctcctcttcttcctccccttccccctcctc 3193
>gb|BC063247.1| Mus musculus zinc finger protein of the cerebellum 1, mRNA (cDNA clone MGC:62379 IMAGE:5694793), complete cds Length = 3087 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttc 491 ||||||||||||||||| |||||||| Sbjct: 623 ccctcctcctcttcttcctcctcttc 648
>gb|BC060527.1| Mus musculus gametogenetin binding protein 1, mRNA (cDNA clone MGC:67514 IMAGE:5709552), complete cds Length = 5028 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| ||| |||| |||||||| Sbjct: 3226 cctcctcctcttcttcctccccttccccctcctc 3193
>gb|BC060247.1| Mus musculus zinc finger protein of the cerebellum 1, mRNA (cDNA clone MGC:67128 IMAGE:6813617), complete cds Length = 2703 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 ccctcctcctcttcttcatcctcttc 491 ||||||||||||||||| |||||||| Sbjct: 241 ccctcctcctcttcttcctcctcttc 266
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 177665 cctcctcctcttcttcctcctcttcttcctcctc 177632
>gb|AC162171.7| Mus musculus chromosome 5, clone RP23-143N11, complete sequence Length = 229553 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 166849 cctcctcctcttcttcctcctcttcctcctcctc 166882
>gb|AY023444.1| Oryza sativa microsatellite MRG5769 containing (TCC)X8, closest to marker C955, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctc 488 |||||||||||||||||||||| Sbjct: 117 cctcctcctcttcttcatcctc 138
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| ||| |||| |||||||| Sbjct: 92581 cctcctcctcttcttcctccccttccccctcctc 92548
>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence Length = 155784 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 ||||||||||||| || |||||||| |||||||| Sbjct: 155457 cctcctcctcttcctcttcctcttccccctcctc 155424
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 465 cccctcctcctcttcttcatcctctt 490 |||||||||||||||||| ||||||| Sbjct: 51438 cccctcctcctcttcttcttcctctt 51463
>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence Length = 209416 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 98398 cctcctcctcttcttcctcctcttcctcctcctc 98365 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 98371 cctcctcctcttcttcctcctcttcttcctcctc 98338
>gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosome 12, complete sequence Length = 190357 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 128879 cctcctcctcttcttcttcctcttcctcctcctc 128846
>gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosome 12, complete sequence Length = 198725 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| ||||||| Sbjct: 152208 cctcctcctcttcttcttcctcttcctcctcctc 152241
>gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, complete sequence Length = 179544 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 cccctcctcctcttcttcatcctctt 490 |||||||||||||||||| ||||||| Sbjct: 101994 cccctcctcctcttcttcctcctctt 101969
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 467 cctcctcctcttcttcatcctcttcaccctcctc 500 |||||||||||||||| |||||||| || ||||| Sbjct: 53863 cctcctcctcttcttcttcctcttccccttcctc 53896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,723,481 Number of Sequences: 3902068 Number of extensions: 4723481 Number of successful extensions: 177269 Number of sequences better than 10.0: 1894 Number of HSP's better than 10.0 without gapping: 1900 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 165862 Number of HSP's gapped (non-prelim): 11257 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
