>YPFP_BACSU (P54166) Putative glycosyl transferase ypfP (EC 2.-.-.-)|
          Length = 382

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
 Frame = +3

Query: 9   KVLILMSDTGGGHRASAEAIKAAFAQEYGDDYQ-VFVTDLWTEHTPWPFNQLPRSYSFLV 185
           +VLIL ++ G GH    +  K  + Q     +Q V V++L+ E  P         Y    
Sbjct: 6   RVLILTANYGNGH---VQVAKTLYEQCVRLGFQHVTVSNLYQESNPIVSEVTQYLYLKSF 62

Query: 186 KHGPLWKMTYYGTAPRVIHQPHFAATATFIAREVAKGLMKYQPDVIISVHPLMQHVPLRV 365
             G  +   +Y    ++ ++  F        + + + + ++QPD+II+  P++     R 
Sbjct: 63  SIGKQFYRLFYYGVDKIYNKRKFNIYFKMGNKRLGELVDEHQPDIIINTFPMIVVPEYRR 122

Query: 366 LRSRGLLDKIPFTTVITDLSTCHPTWFHKLVTRCY 470
              R     IP   V+TD    H  W H+ V + Y
Sbjct: 123 RTGR----VIPTFNVMTDF-CLHKIWVHENVDKYY 152

>FP1_MYTGA (Q27409) Adhesive plaque matrix protein precursor (Foot protein 1)|
           (MGFP1) (MGFP-1)
          Length = 751

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +3

Query: 150 FNQLPRSYSFLVKHGPLWKMTYYGTAPRVIHQPHFAATATFIAREVAKGLMKYQP 314
           +  LP +Y +  KHGP++K       P   + P + +   ++   +AK L  Y+P
Sbjct: 42  YKTLPNAYPYGTKHGPVYKPVKTSYHPTNSYPPTYGSKTNYL--PLAKKLSSYKP 94

>COOS2_METMA (Q8PUN1) Carbon monoxide dehydrogenase 2 (EC 1.2.99.2) (CODH 2)|
          Length = 634

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 210 TYYGTAPRVIHQPHFAATATFIAREVAKGLMKYQPDVIISVHPLMQHV 353
           TY    P V   P+     T   REV  GL+  + D + +V  + QH+
Sbjct: 578 TYVNPVPTVTGAPNLVKLLTEDCREVTGGLLNVETDAVKAVDGIEQHI 625

>MURC_BIFLO (Q8G4Q4) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 512

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 213 YYGTAPRVIHQPHFAATATFIAREVAKGLMKYQPDVIISVHP 338
           Y  +  RVI QPH  +   F A + AK L K    +I  + P
Sbjct: 389 YPDSTIRVIFQPHLFSRTKFFAHQFAKSLAKADDVIITGIFP 430

>COOS2_METAC (Q8TR73) Carbon monoxide dehydrogenase 2 (EC 1.2.99.2) (CODH 2)|
          Length = 633

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 210 TYYGTAPRVIHQPHFAATATFIAREVAKGLMKYQPDVIISVHPLMQHV 353
           TY    P V   P      T   REV  G++  + D + +V  + QH+
Sbjct: 577 TYVNPVPTVTGAPDLVKLLTEDCREVTGGVLNVEKDAVKAVDGIEQHI 624

>MURI_CHLTE (Q8KFN8) Glutamate racemase (EC 5.1.1.3)|
          Length = 272

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 195 PLWKMTYYGTAPRVIHQPHFAATATFIAREVAKGLMKYQPDVII 326
           P  ++ Y+G   RV +      T    ARE  + LMK+QP +II
Sbjct: 33  PSERIIYFGDTARVPYGSKSQVTIRKYAREDTELLMKHQPKLII 76

>DLGP1_HUMAN (O14490) Disks large-associated protein 1 (DAP-1) (Guanylate|
           kinase-associated protein) (hGKAP)
           (SAP90/PSD-95-associated protein 1) (SAPAP1)
           (PSD-95/SAP90-binding protein 1)
          Length = 977

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 278 ERGCQRSDEVPTRCDYQCTSFNATCPPSSSTVQRFIG*DSVHNC 409
           E+GC + DE        C S  ++ PP ++T  R I   +V +C
Sbjct: 499 EKGCSQDDE--------CVSLRSSSPPRTTTTVRTIQSSTVSSC 534


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,049,607
Number of Sequences: 219361
Number of extensions: 1497443
Number of successful extensions: 4020
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4020
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)