>YTHD2_HUMAN (Q9Y5A9) YTH domain protein 2 (High-glucose-regulated protein 8)|
           (NY-REN-2 antigen) (CLL-associated antigen KW-14)
          Length = 579

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 3   EQGIQMLKIFKEHVSKTSILEDFTFYENR 89
           E+  Q+LKI   +   TSI +DF+ YE R
Sbjct: 535 EKAKQVLKIIASYKHTTSIFDDFSHYEKR 563

>YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1 homolog) (DACA-1 homolog)
          Length = 559

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 3   EQGIQMLKIFKEHVSKTSILEDFTFYENR 89
           E+  Q+LKI   +   TSI +DF+ YE R
Sbjct: 514 EKAKQVLKIIASYKHTTSIFDDFSHYEKR 542

>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1) (DACA-1)
          Length = 559

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   EQGIQMLKIFKEHVSKTSILEDFTFYENR 89
           E+  Q+LKI   +   TSI +DF  YE R
Sbjct: 514 EKAKQVLKIISSYKHTTSIFDDFAHYEKR 542

>VG28_ICHV1 (Q00131) Hypothetical gene 28 protein|
          Length = 590

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
 Frame = -3

Query: 250 PLMASCCFS------PLTPFGTVTFGSCC-FSP 173
           P+    CF       PLT FGT   G+CC FSP
Sbjct: 56  PVFCDRCFGTSLYEVPLTGFGTFVVGTCCIFSP 88

>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 159 PNLVAGEKQQEPKVTVPNGVN-GEKQQDAINGK 254
           P   AGE Q +   TVP+G+  GE+ Q+ + GK
Sbjct: 314 PRPPAGEAQGKSATTVPSGLGAGEQTQEGLTGK 346

>WTF16_SCHPO (Q9Y7N5) Hypothetical protein wtf16|
          Length = 349

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 133 WICXCFILFSCINFXRFS*KVKSSRIEVLLTCSLN 29
           W+  CF+LF CI F      +   +  +  TCS++
Sbjct: 160 WVVICFVLFGCIKFG----NLNLDKALICSTCSIS 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,033,386
Number of Sequences: 219361
Number of extensions: 454491
Number of successful extensions: 1320
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)