| Clone Name | baal19g23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YC20L_ARATH (O80813) Ycf20-like protein | 39 | 0.015 | 2 | CU030_HUMAN (Q9UFM2) Putative protein C21orf30 | 32 | 1.1 | 3 | ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta) | 29 | 9.2 |
|---|
>YC20L_ARATH (O80813) Ycf20-like protein| Length = 121 Score = 38.5 bits (88), Expect = 0.015 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = +3 Query: 519 LGRTRLGRLAQAAGRQLFEKLNSARSN 599 LG TRLGR+A A G+QL K+NSAR N Sbjct: 8 LGSTRLGRIAIAGGKQLLGKINSARKN 34
>CU030_HUMAN (Q9UFM2) Putative protein C21orf30| Length = 244 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Frame = -2 Query: 539 AKPCPAKKTTVLFKVFAIG--IRWSTCLQGKHRPPS*VFHLVTDCSS-ARLCSPQEAGPA 369 A PC + + + +G RW + PP TDC S L P Sbjct: 124 ASPCDSVLCSPDVSMCTLGPAARWDAQAKSAPLPPC-----CTDCKSFPHLQRPWAQPHT 178 Query: 368 KDITQRRHGAVADTSSAEASCWRSWRAERCTMPQKHGLVSGGYALRP 228 T G ++ + W WR+ C Q G+ + GY++ P Sbjct: 179 SQATSVDSGEAGTKGMSQFTVWTWWRSRPCETRQGEGIGNWGYSVTP 225
>ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta)| Length = 573 Score = 29.3 bits (64), Expect = 9.2 Identities = 23/82 (28%), Positives = 32/82 (39%) Frame = +3 Query: 249 AHQTMLLRHGASLCAPRPPAGGLCAGGVRHSSVPALRDVLCRTCFLRTAKTSGGAISYQM 428 AH MLL H L G ++ +V L D+L T +S + SY Sbjct: 485 AHLLMLLAHIRHLSNK----GMEHLSNMKRKNVVPLYDLLLEMLDANTMHSSRMSASYSS 540 Query: 429 KNSRWRPVFALETGGPPNADGE 494 + S W + G PP+ GE Sbjct: 541 QPSPWSQAAQSQPGPPPSCSGE 562 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,303,591 Number of Sequences: 219361 Number of extensions: 1535986 Number of successful extensions: 4734 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4581 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4734 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)