ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19g19 |
|---|---|
| Clone Library Name | barley_pub |
>UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 222 Score = 199 bits (505), Expect = 3e-51 Identities = 97/109 (88%), Positives = 97/109 (88%) Frame = +2 Query: 98 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI 277 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI Sbjct: 11 NPTQLCRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAI 70 Query: 278 SLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPN 424 SLPTFGMLVPYGSFLVP KDKLGNDILVEDWLKTHGPN Sbjct: 71 SLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPN 119
>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 225 Score = 155 bits (391), Expect = 5e-38 Identities = 80/113 (70%), Positives = 87/113 (76%), Gaps = 4/113 (3%) Frame = +2 Query: 98 NPTQLCRTRASSLCKPVKGLGFGRERIPRN---ITCMAGS-ISADRVPDMSKRELMNLLL 265 NPTQLCR+RAS L KPVKGLGFGRER+PR ITC A S I ADRVPDM KR+LMNLLL Sbjct: 11 NPTQLCRSRAS-LGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQLMNLLL 69 Query: 266 LGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGPN 424 LGAISLPT GMLVPYG+F +P KDKLGND+L E+WLKTHGPN Sbjct: 70 LGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPN 122
>UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 114 bits (284), Expect = 1e-25 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 7/114 (6%) Frame = +2 Query: 101 PTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNL 259 P+QLC ++ C KP + GR ITC A SI ADRVPDMSKR+ +NL Sbjct: 11 PSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNL 70 Query: 260 LLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 LLLGA+SLPT GMLVPYGSFLVP KD +GND++ +WLKTH P Sbjct: 71 LLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAP 124
>UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 110 bits (275), Expect = 1e-24 Identities = 54/96 (56%), Positives = 64/96 (66%) Frame = +2 Query: 134 LCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYG 313 L K +GL +E + R +TC A SI ADRVPDM KR+ MNLLLLGA+SLPT GML+PYG Sbjct: 30 LGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYG 89 Query: 314 SFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 +F VP KD +GNDI+ WLKTHGP Sbjct: 90 AFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGP 125
>UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 228 Score = 104 bits (259), Expect = 1e-22 Identities = 59/116 (50%), Positives = 73/116 (62%), Gaps = 10/116 (8%) Frame = +2 Query: 104 TQLCRTRASS-------LCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKRELM 253 TQLC +++ L KP+K G G+++ + + CMA SI AD RVPDM KR LM Sbjct: 10 TQLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMK-VKCMATSIPADDRVPDMEKRNLM 68 Query: 254 NLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 NLLLLGA+SLPT GMLVPYG+F VP KD LGND++ +WLKTH P Sbjct: 69 NLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPP 124
>UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 101 bits (252), Expect = 6e-22 Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 10/117 (8%) Frame = +2 Query: 101 PTQLCRTRA-------SSLCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKREL 250 P+QLC +++ + L KP+K G G G+++ + CMA SI AD RVPDM KR L Sbjct: 11 PSQLCSSKSGVSSVSQALLVKPMKINGHGMGKDKRMK-AKCMAASIPADDRVPDMEKRNL 69 Query: 251 MNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 MNLLLLGA++LPT GMLVPY +F P KD GND++V +WLKTH P Sbjct: 70 MNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSP 126
>UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 228 Score = 100 bits (249), Expect = 1e-21 Identities = 57/116 (49%), Positives = 71/116 (61%), Gaps = 10/116 (8%) Frame = +2 Query: 104 TQLCRTRASS-------LCKPVK--GLGFGRERIPRNITCMAGSISAD-RVPDMSKRELM 253 TQLC +++ L KP+K G G+++ + + CMA SI AD RVPDM KR LM Sbjct: 10 TQLCSSKSGLSSVSQCLLLKPMKINSHGLGKDKRMK-VKCMATSIPADDRVPDMEKRNLM 68 Query: 254 NLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 NLLLLGA+SLPT GMLVPY +F P KD LGND++ +WLKTH P Sbjct: 69 NLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPP 124
>UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) (Proton gradient regulation protein 1) Length = 229 Score = 100 bits (248), Expect = 2e-21 Identities = 48/85 (56%), Positives = 58/85 (68%) Frame = +2 Query: 167 RERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXX 346 +E+I I+C A SI ADRVPDM KR+ +NLLLLGA+SLPT MLVPY +F VP Sbjct: 40 KEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGG 99 Query: 347 XXXXXXKDKLGNDILVEDWLKTHGP 421 KD LGND++ +WLKTHGP Sbjct: 100 GGGTPAKDALGNDVVAAEWLKTHGP 124
>UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 230 Score = 98.2 bits (243), Expect = 7e-21 Identities = 56/115 (48%), Positives = 68/115 (59%), Gaps = 8/115 (6%) Frame = +2 Query: 101 PTQLCRTR----ASSLCKPVKG---LGFGRERIP-RNITCMAGSISADRVPDMSKRELMN 256 P+QLC ++ A SL G + +ERI +TC A SI AD VPDM KRE +N Sbjct: 11 PSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLN 70 Query: 257 LLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 LLLLGA+SLPT ML+PY SF VP KD LGND++ +WLKTH P Sbjct: 71 LLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAP 125
>UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 241 Score = 72.8 bits (177), Expect = 3e-13 Identities = 45/95 (47%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Frame = +2 Query: 140 KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSF 319 KPV + +I+C A S D VPDM KR+LMNLLLLGAI+ PT G P+ SF Sbjct: 45 KPVFAAAKAAKATTFSISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSF 101 Query: 320 LV-PXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 LV P KD GNDI VE WL+T P Sbjct: 102 LVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKP 136
>UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 239 Score = 72.0 bits (175), Expect = 5e-13 Identities = 43/95 (45%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Frame = +2 Query: 140 KPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSF 319 KPV + +++C A S D VPDM KR+LMNLLLLGAI+ P G P+ SF Sbjct: 43 KPVFAAAKPAKETTFSVSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSF 99 Query: 320 LV-PXXXXXXXXXXXXKDKLGNDILVEDWLKTHGP 421 LV P KD LGND+ V WL+TH P Sbjct: 100 LVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKP 134
>UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 206 Score = 67.8 bits (164), Expect = 1e-11 Identities = 36/91 (39%), Positives = 45/91 (49%) Frame = +2 Query: 143 PVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFL 322 P K R R+ + A S VPDM+KR +MNL+L G LP + + YG+F Sbjct: 12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFF 68 Query: 323 VPXXXXXXXXXXXXKDKLGNDILVEDWLKTH 415 VP KD LGNDI +WLKTH Sbjct: 69 VPPSSGGGGGGQAAKDALGNDIKAGEWLKTH 99
>UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 206 Score = 67.4 bits (163), Expect = 1e-11 Identities = 37/91 (40%), Positives = 45/91 (49%) Frame = +2 Query: 143 PVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFL 322 P K R R+ + A S VPDM+KR +MNL+LLG SLP + + YG+F Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFF 68 Query: 323 VPXXXXXXXXXXXXKDKLGNDILVEDWLKTH 415 VP KD LGNDI WL TH Sbjct: 69 VPPSSGGGSGGQAAKDALGNDIKANAWLATH 99
>UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 53.1 bits (126), Expect = 3e-07 Identities = 26/66 (39%), Positives = 33/66 (50%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPDM +R+ MNLL G I+ G L P + +P KD LGNDI V ++ Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69 Query: 404 LKTHGP 421 L H P Sbjct: 70 LAKHLP 75
>UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit 1 (EC| 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 52.4 bits (124), Expect = 4e-07 Identities = 23/64 (35%), Positives = 35/64 (54%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPDM +R+ MNLL G ++ G L P ++ +P KD+LGND+ V + Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKF 69 Query: 404 LKTH 415 L++H Sbjct: 70 LESH 73
>UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit 1 (EC| 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) Length = 179 Score = 52.4 bits (124), Expect = 4e-07 Identities = 23/64 (35%), Positives = 35/64 (54%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPDM +R+ MNLL G ++ G L P ++ +P KD+LGND+ V + Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKF 69 Query: 404 LKTH 415 L++H Sbjct: 70 LESH 73
>UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 180 Score = 52.4 bits (124), Expect = 4e-07 Identities = 24/64 (37%), Positives = 35/64 (54%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPD+ +R+ +NLL +G + G L P + +P KD LGNDI+V D+ Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDY 69 Query: 404 LKTH 415 L+TH Sbjct: 70 LQTH 73
>UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 51.2 bits (121), Expect = 1e-06 Identities = 23/64 (35%), Positives = 34/64 (53%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPDM +R+ MNLL G ++ G L P + +P KDKLGN++ V + Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69 Query: 404 LKTH 415 L++H Sbjct: 70 LESH 73
>UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 51.2 bits (121), Expect = 1e-06 Identities = 23/69 (33%), Positives = 35/69 (50%) Frame = +2 Query: 209 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 388 +S+ VP M +R+ MNLL G+++ G L P ++ +P KD+LGN I Sbjct: 4 LSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAI 63 Query: 389 LVEDWLKTH 415 WL +H Sbjct: 64 TATGWLSSH 72
>UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit 2 (EC| 1.10.99.1) (Rieske iron-sulfur protein 2) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 2) (ISP 2) (RISP 2) Length = 180 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = +2 Query: 224 VPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILVEDW 403 VPD+ +R+ MNLL G I+ G L P +L+P KD LGND+ V ++ Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 69 Query: 404 LKTH 415 L +H Sbjct: 70 LASH 73
>UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 49.3 bits (116), Expect = 4e-06 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +2 Query: 209 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 388 +++ VP M +R+ MNLL G+++ G L P + +P KD+LGN + Sbjct: 4 MTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSV 63 Query: 389 LVEDWLKTH 415 WL H Sbjct: 64 TASGWLANH 72
>UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/69 (33%), Positives = 31/69 (44%) Frame = +2 Query: 209 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 388 +S VP M +R+ MNLL G + G L P +F +P KD+LGN + Sbjct: 4 MSPSDVPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAV 63 Query: 389 LVEDWLKTH 415 WL H Sbjct: 64 TATGWLSNH 72
>UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 178 Score = 48.9 bits (115), Expect = 5e-06 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = +2 Query: 209 ISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDI 388 +S++ VP M +R+ MNLL G + G L P ++ +P KD+LGN + Sbjct: 4 LSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPV 63 Query: 389 LVEDWLKTH 415 WL +H Sbjct: 64 TKTGWLASH 72
>UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 48.5 bits (114), Expect = 6e-06 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = +2 Query: 215 ADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDILV 394 A VP M +R+ MNLL G+++ G L P ++ +P KD LGND+++ Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66 Query: 395 EDWLKTH 415 +L H Sbjct: 67 SKFLADH 73
>UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 179 Score = 48.5 bits (114), Expect = 6e-06 Identities = 25/68 (36%), Positives = 36/68 (52%) Frame = +2 Query: 206 SISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGND 385 S SAD VPDM +R+ MNLL G ++ G L P + +P KD+LGND Sbjct: 5 SESAD-VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGND 63 Query: 386 ILVEDWLK 409 + + +L+ Sbjct: 64 VSLSKFLE 71
>UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit, chloroplast| precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 252 Score = 44.3 bits (103), Expect = 1e-04 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = +2 Query: 167 RERIP---RNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXX 337 R ++P R A + D VPDM KR+LMN L+L A++ Y + P Sbjct: 60 RNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMNNLVLAAVAPVVASAGGCYLYYFYPPQT 119 Query: 338 XXXXXXXXXKDKLGNDILVEDWLKTHGPN 424 D LGN + E W K+H N Sbjct: 120 GGGGGAVGALDALGNPVSAESWFKSHKKN 148
>UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)| (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 186 Score = 35.4 bits (80), Expect = 0.056 Identities = 22/70 (31%), Positives = 32/70 (45%) Frame = +2 Query: 212 SADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPXXXXXXXXXXXXKDKLGNDIL 391 +A +P MS+R+L++ + GAI+ T L P + +P KDK G DI Sbjct: 5 AAQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDIS 63 Query: 392 VEDWLKTHGP 421 V L P Sbjct: 64 VSKLLAAATP 73
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 33.9 bits (76), Expect = 0.16 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +1 Query: 97 QPHPALPN-PCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEG--ADEPP 261 QPHP P+ P A QA G H ++H H L GP P +Q+G +PP Sbjct: 1257 QPHPPPPHSPHTAAQQAA-------GQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPP 1307 Score = 32.0 bits (71), Expect = 0.62 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +1 Query: 40 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHP----EEHHMHGRQ 207 P P S++G ++ + Q + A P+P GPG PG P HH+H +Q Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVA-PHPYGAPPPPGSGPGGPPGPDPAAVMHYHHLHQQQ 100 Query: 208 HLRGPRPGHEQE---GADEPP 261 P P +Q+ G PP Sbjct: 101 QQHPPPPHMQQQQHHGGPAPP 121
>IKBL_PIG (Q9TSV7) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa| B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1) Length = 380 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -3 Query: 328 RDEEGAVGDEHAEGGERDGAQQQEVHQLPLAHVR---DAVRGDAAGHACDVPRDALPAEA 158 R+ EGA AEG QQ+E +L R + +R A A + PRD +P A Sbjct: 217 RETEGACRPPRAEGSSHSWRQQEEEQRLFRERARAKEEELRESQARRAQEAPRDPVPEPA 276 Query: 157 QA 152 +A Sbjct: 277 RA 278
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = +1 Query: 34 DRPLRPVAASHHGLHRALHR-------LQPHPALPNPCELAMQARQGPGLRPGAHP 180 DRP A+SHH HR R L+ P+L + A + GPGL PG P Sbjct: 2040 DRPPPSQASSHHHHHRCHRRRDRKQRSLEKGPSLSADMDGAPSSAVGPGLPPGEGP 2095
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 32.3 bits (72), Expect = 0.48 Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 19/98 (19%) Frame = +1 Query: 25 RSLDRPLR---PVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHP----- 180 R RP R P G HR R P PA+ P E + +GP R HP Sbjct: 164 RHAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRGPDEDQAREFRGPRHRRERHPPTARD 223 Query: 181 ---------EEHHMHGRQHLRG-PRP-GHEQEGADEPP 261 + HH+ GR RG PRP G E PP Sbjct: 224 VLRGEPGHGDGHHLEGR---RGRPRPQGREAGRGAHPP 258
>NBL1_RAT (Q06880) Neuroblastoma suppressor of tumorigenicity 1 precursor| (Zinc finger protein DAN) (N03) Length = 178 Score = 32.0 bits (71), Expect = 0.62 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 136 MQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEGADEPP 261 MQ GPG +PG+H H P PG + +EPP Sbjct: 135 MQGEDGPGSQPGSHSHSH----------PHPGCQTPEPEEPP 166
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 32.0 bits (71), Expect = 0.62 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 17/82 (20%) Frame = +1 Query: 40 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPG-----------------LRP 168 P P + HH L+ A P P +PN +Q+ GP + P Sbjct: 480 PAPPAMSPHHSLNSA----GPSPGMPNSGPSPLQSPAGPNGPNNNNSNNNNGPMMGQMIP 535 Query: 169 GAHPEEHHMHGRQHLRGPRPGH 234 A P +H +QH+ G PGH Sbjct: 536 NAVPMQH----QQHMGGGPPGH 553
>K0310_HUMAN (O15027) Protein KIAA0310| Length = 2179 Score = 32.0 bits (71), Expect = 0.62 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = +1 Query: 94 LQPHPALPNPCE-LAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPG 231 L+P P P L GPGL PG P + H Q R P PG Sbjct: 1802 LEPGPGCVTPGPALGFLEPSGPGLPPGVPPLQERRHLLQEARSPDPG 1848
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 32.0 bits (71), Expect = 0.62 Identities = 19/49 (38%), Positives = 21/49 (42%) Frame = +1 Query: 100 PHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEG 246 P PA+P P GPGL+PG P GPRPG EG Sbjct: 93 PRPAVPKP---------GPGLKPGPRPVPK--------PGPRPGPRPEG 124
>NBL1_HUMAN (P41271) Neuroblastoma suppressor of tumorigenicity 1 precursor| (Zinc finger protein DAN) (N03) Length = 180 Score = 31.6 bits (70), Expect = 0.81 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +1 Query: 136 MQARQGPGLRPGAHPEEH-HMHGRQHLRGPR-----PGHEQEGADE 255 +Q GPG +PG HP H H H P P E+EGA++ Sbjct: 135 VQGEDGPGSQPGTHPHPHPHPHPGGQTPEPEDPPGAPHTEEEGAED 180
>UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit 3 (EC| 1.10.99.1) (Rieske iron-sulfur protein 3) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 3) (ISP 3) (RISP 3) Length = 178 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 227 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLV-PXXXXXXXXXXXXKDKLGNDI 388 P +S+R+L+N + +++ L P G FL+ P KD LG I Sbjct: 10 PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILGKQI 64
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 30.4 bits (67), Expect = 1.8 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +1 Query: 76 HRALHRLQPHPALPNPCELAMQA--RQGPGLRPGAHPEEHHMHGRQHLRGPRPGH 234 H AL R P PA P PC Q + P +P P + + +QHL GP P H Sbjct: 718 HMAL-RPGPAPAPPQPCFPVPQPVPQSVPQPQPLPTPYTYSIGTKQHLTGPLPQH 771
>HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB| Length = 303 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/51 (37%), Positives = 19/51 (37%) Frame = +1 Query: 64 HHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLR 216 HHG H H P P P E A A GP L G P H G R Sbjct: 20 HHG-HDHHHHEHPFVRRPAPAEAAPPAAGGPNLHFGQGPARAHAPGLSQSR 69
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Frame = +1 Query: 154 PGLRPGAHPEE--HHMHGRQHLRGPRPGH 234 PG RPGAHP H HG G P H Sbjct: 35 PGGRPGAHPSHGAHPAHGAHPSHGAHPSH 63
>KR1_BHV1S (Q08097) Serine/threonine-protein kinase (EC 2.7.11.1)| Length = 467 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 4/79 (5%) Frame = -3 Query: 370 VLGGDPSGVAPGAGRDEEGAVGDEH--AEGGERDGAQQQEVHQLPLAHVRDA--VRGDAA 203 V G + GVA AG + A GDE A GGE + + E + D D A Sbjct: 87 VAGNEQGGVA--AGNERRAATGDEKESASGGENESESESESESESESGADDGDWDDDDDA 144 Query: 202 GHACDVPRDALPAEAQALD 146 G A V R+ A+AL+ Sbjct: 145 GPAGGVTREEAEGAARALN 163
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +1 Query: 46 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 189 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 208 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 261
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +1 Query: 46 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 189 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 208 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 261
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Frame = +1 Query: 46 RPVAASHHGL-------HRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEH 189 +P HHGL H A H PH + P+ QGP PGAH + H Sbjct: 206 QPAGLHHHGLRDAHDEPHHADHHPHPH-SHPHQQPPPPPPPQGPPGHPGAHHDPH 259
>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)| (TRF1-interacting ankyrin-related ADP-ribose polymerase) Length = 1327 Score = 29.6 bits (65), Expect = 3.1 Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%) Frame = +1 Query: 61 SHHGLHRALHRLQPHPAL-----PNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPR 225 S H H +LQP P P P L+ PGL PG P G PR Sbjct: 7 SQHHHHHHQQQLQPAPGASAPPPPPPPPLS------PGLAPGTTPASPTASGLAPFASPR 60 Query: 226 PG---HEQEGADEPP 261 G E +G+ +PP Sbjct: 61 HGLALPEGDGSRDPP 75
>BHLH3_HUMAN (Q9C0J9) Class B basic helix-loop-helix protein 3 (bHLHB3)| (Differentially expressed in chondrocytes protein 2) (hDEC2) (Enhancer-of-split and hairy-related protein 1) (SHARP-1) Length = 482 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = +1 Query: 166 PGAHPEEHHMHGRQHL--RGPR-PGHEQEGADEPP 261 P P H HGR HL GPR PG+ + A E P Sbjct: 440 PLGAPHPQHPHGRTHLPFAGPREPGNPESSAQEDP 474
>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus| (Acinus) Length = 1338 Score = 29.3 bits (64), Expect = 4.0 Identities = 21/65 (32%), Positives = 24/65 (36%) Frame = +1 Query: 31 LDRPLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQH 210 +DRP A G R LH P P P P A Q Q +R E M R+ Sbjct: 1099 VDRPSE-TKAEEQGAPRPLHPPPPPPVQPPPHPRAEQREQERAVREQWAEREREMERRER 1157 Query: 211 LRGPR 225 R R Sbjct: 1158 TRSER 1162
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +1 Query: 130 LAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEGADEP 258 LA QA PGL PG+ E H + QHL P+ GADEP Sbjct: 145 LASQAFGRPGL-PGSSLEPH-LEASQHLPVPKHLPSSGGADEP 185
>VPS13_YEAST (Q07878) Vacuolar protein sorting-associated protein VPS13| (Suppression of the onset of impotence protein 1) Length = 3144 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%) Frame = -1 Query: 243 LLLMSGTRSAEMLPA----MHVMFLGMRSRPKPRPLTGLH 136 L+L SGTR+ E+ A + + L RS+ KP P+ GLH Sbjct: 2488 LVLESGTRTREVRLAEIGELPPLRLDKRSKDKPAPIVGLH 2527
>PREB_HUMAN (Q9HCU5) Prolactin regulatory element-binding protein (Mammalian| guanine nucleotide exchange factor mSec12) Length = 417 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +1 Query: 52 VAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEE 186 + A+ H L R Q H N E A QGP R GA P E Sbjct: 81 ILAAGQDAHCQLLRFQAHQQQGNKAEKAGSKEQGPRQRKGAAPAE 125
>RYR3_HUMAN (Q15413) Ryanodine receptor 3 (Brain-type ryanodine receptor) (RyR3)| (RYR-3) (Brain ryanodine receptor-calcium release channel) Length = 4870 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Frame = -3 Query: 424 VGAVRLEPILDEDVVAELVLGGDPS-------GVAPGAGRDEEGAVGDEHAEGGERDGAQ 266 +G + + + D+D V +++L DPS G GA ++E V ++ E GE+ G + Sbjct: 1729 IGTLLVMGVFDDDDVRQILLLIDPSVFGEHSAGTEEGAEKEEVTQVEEKAVEAGEKAGKE 1788
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = +1 Query: 166 PGAHPEEHHMHGRQHLRGPR-PGHEQEGADEPP 261 P H E HH HG QHL ++Q GA P Sbjct: 203 PHYHHEHHHNHGHQHLGSSELSENQQPGAPNAP 235
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 28.9 bits (63), Expect = 5.3 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 20/88 (22%) Frame = +1 Query: 49 PVAASHHGLHRALHRL---QPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHG------ 201 PV S + +R R +P PA P P + +A G G PG+ E G Sbjct: 169 PVKGSRYAPNRRRFRRFIPRPRPAAPPP--MVAEAPSG-GTEPGSEGERAEDSGQRPRRR 225 Query: 202 --------RQHLRGPRPGHEQ---EGAD 252 R+ +RGPRP ++Q EG+D Sbjct: 226 RPPPFFYRRRFVRGPRPPNQQQPIEGSD 253
>TF2AA_PONPY (Q5RCU0) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 376 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 379 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 239 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 267 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 314
>TF2AA_HUMAN (P52655) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) (TFIIA-42) (TFIIAL) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFI Length = 376 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 379 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 239 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 267 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 314
>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc finger| protein 4) (HKR4 protein) Length = 376 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +1 Query: 82 ALHRLQPHPALPNPCELAMQARQGPGLRPGA--HPEEHHMHGRQH 210 AL +Q P++P+P L+ PG PG H + H+HG QH Sbjct: 3 ALGDIQESPSVPSPVSLS-----SPGT-PGTQHHEPQLHLHGHQH 41
>K6PF_CAEEL (Q27483) Probable 6-phosphofructokinase (EC 2.7.1.11)| (Phosphofructokinase) (Phosphohexokinase) Length = 756 Score = 28.9 bits (63), Expect = 5.3 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = -3 Query: 400 ILDEDVVAELVLGGDPSGVAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPLAHVRDA 221 + D+ + +V+GGD S + ++E G G+E G+ E +L LA + + Sbjct: 98 MFDKRIFHLIVIGGDGSLMGAQKLKEEWGRFGEELFAEGKITEEVANEGRELHLAGIVGS 157 Query: 220 VRGDAAGHACDVPRD-ALPAEAQALDGLA*RART 122 + D + D AL +A+DGL A++ Sbjct: 158 IDNDCIESDKSIGSDTALHRICEAIDGLVMTAQS 191
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = +1 Query: 28 SLDRPLRPVAASHHGLHRALHR-------LQPHPALPNPCELAMQARQGPGLRPGAHP 180 +LDRP P A HH HR R L+ P+L + A + GPGL G P Sbjct: 2040 ALDRPA-PSQAPHHHHHRCHRRRDRKQRSLEKGPSLSADTDGAPDSTVGPGLPTGEGP 2096
>TF2AA_MOUSE (Q99PM3) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 378 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 379 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 239 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 269 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 316
>GALR3_HUMAN (O60755) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 368 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 67 HGLHRALHRLQPHPALPNPC--ELAMQARQGPGLRPGAHPEEHHMHGRQHLRGP 222 H RAL R++P + P C + R G G P E +HG + RGP Sbjct: 314 HRARRALRRVRPASSGPPGCPGDARPSGRLLAGGGQGPEPREGPVHGGEAARGP 367
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +1 Query: 73 LHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGH 234 LHR +H P +P + + GPG PG P + + +Q+ P+P H Sbjct: 191 LHRKIHVT---PLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQH 241
>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 238 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +1 Query: 46 RPVAASHHGLHRALHRLQPHPA------LPNPCELAMQARQGPGLRPGAHPEEH 189 +P A +G +A +QPH P P A QA P RP P+++ Sbjct: 170 QPPAQQSYGQQQAQPHVQPHAQPQQGGYAPKPAAPAYQAPAAPAQRPAPQPQQN 223
>ODD_DROME (P23803) Protein odd-skipped| Length = 392 Score = 28.9 bits (63), Expect = 5.3 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = +1 Query: 175 HPEEHHMHGRQHLRGPRPGH 234 HP HH HG H P P H Sbjct: 150 HPHHHHHHGHPHHPHPHPHH 169
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +1 Query: 40 PLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGP---GLRPGAHP 180 P R ASH G + L R QP P P E + + +GP LRP P Sbjct: 1706 PRRRPPASHEGERKELPREQPLPPGPIGTERSQRTDRGPEPGPLRPAHRP 1755
>TF2AA_RAT (O08949) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 377 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 379 AELVLGGDPSG-VAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPL 239 A LVL D +G + DEE D+ E E+DGA+ +V + PL Sbjct: 268 APLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 315
>HNRLL_MOUSE (Q921F4) Heterogeneous nuclear ribonucleoprotein L-like| Length = 591 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 364 GGDPSGVAPGAGRDEEGAVGDEHAEGGERDG 272 GGD G + G G EEG G+E EG +G Sbjct: 62 GGDGDGGSGGGGDGEEGEGGEEGDEGDGDEG 92
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Frame = +1 Query: 97 QPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPG-HEQEGADEP 258 +PH P P A PG RPG P GPRPG + GA P Sbjct: 158 KPHAPAPKPKPGAPSKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRTGAPRP 212
>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)| Length = 338 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 364 GGDPSGVAPGAGRDEEGAVGDEHAEGGERDGAQQQ 260 G +P G A G+G D EG G+ AE A Q+ Sbjct: 231 GSEPKGAAEGSGGDGEGPPGEAGAEKSSSAVAPQR 265
>R4RL1_HUMAN (Q86UN2) Reticulon-4 receptor-like 1 precursor (Nogo-66 receptor| homolog 2) (Nogo-66 receptor-related protein 3) (NgR3) (Nogo receptor-like 2) Length = 441 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%) Frame = +1 Query: 172 AHPEEHHMHG----RQHLRGPRPGHEQEG 246 A E H HG + H GPRPGH + G Sbjct: 325 ARKEHHSPHGPTRSKGHPHGPRPGHRKPG 353
>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) Length = 323 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/67 (29%), Positives = 21/67 (31%) Frame = +1 Query: 61 SHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQ 240 S G H H PHP P GP AHP HH H P P Sbjct: 126 SFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPH----AHPHHHH----HHQASPPPSSAA 177 Query: 241 EGADEPP 261 A + P Sbjct: 178 SPAQQLP 184
>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)| (Scaffold attachment factor A) (SAF-A) (p120) (pp120) Length = 824 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = -3 Query: 373 LVLGGDPSGVAPGAGRDEEGAVG---DEHAEGGERDGAQQQEVHQLPLAHVRDAVRGDAA 203 L LGGD +G GAG ++E A G +E E E +G + Q+ L AA Sbjct: 60 LDLGGDSAG-RSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGDQMELGE-----ENGAA 113 Query: 202 GHACDVPRDALPAEAQALDG 143 G A P + A ++ +G Sbjct: 114 GAADSGPMEEEEAASEDENG 133
>FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear factor) (MNF)| Length = 617 Score = 28.5 bits (62), Expect = 6.9 Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 7/83 (8%) Frame = +1 Query: 4 ARGAVLARSLDRPLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPE 183 AR + RS P PV + P PA P P A+ A GPG GA Sbjct: 10 ARALLALRSA--PCSPVLCAAAAAAAFPATTSPPPAQPPPGPPALPAEPGPG---GALHR 64 Query: 184 EHHMHGRQH-------LRGPRPG 231 H H R LR P PG Sbjct: 65 RHCHHHRARPGGRGRCLRAPEPG 87
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 16/82 (19%) Frame = +1 Query: 61 SHHGLHR--ALHRLQ--PHPALPNPCELAMQARQGPGLRPGAHP------------EEHH 192 SHH A H LQ P PALPNP + G + P P Sbjct: 99 SHHNTSTSSANHSLQSPPRPALPNPYMSSSTGAPGGPVAPALPPPVGINSSSSPGSSAAG 158 Query: 193 MHGRQHLRGPRPGHEQEGADEP 258 +H R H G P H+ A P Sbjct: 159 LHQRHHQPG-APAHQHRAAPPP 179
>OAR1_LYMST (O77408) Octopamine receptor 1 (OA1)| Length = 638 Score = 28.5 bits (62), Expect = 6.9 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -3 Query: 364 GGDPSGVAPGAGRDEEGAVGDEHAEGGERDGAQQQEVHQLPLAHVR--DAVRGDAAGHAC 191 G G A GA E GD+ A GG R G Q+ + H LP+ R DA G C Sbjct: 314 GSTYGGSAAGAATRE--GCGDKDAAGGRRFGRQEMDSH-LPVRKCRSSDASLVTLTGLKC 370 Query: 190 DV 185 ++ Sbjct: 371 EI 372
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -3 Query: 352 SGVAPG---AGRDEEGAVGDEHAEGGERDGAQQQEVHQLP 242 +G APG A EE A G+E A GG+ A+ +E P Sbjct: 208 AGAAPGEPTAAPGEEAAAGEEGAAGGDPQEAKPEEAAVAP 247
>PO4F1_MOUSE (P17208) POU domain, class 4, transcription factor 1| (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0) Length = 421 Score = 28.1 bits (61), Expect = 9.0 Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Frame = -3 Query: 364 GGDPSGVAPGAGRDEEGAVGDEHAEGGE-RDGAQQQEVHQLPLAHVRDAVRGDAAGHACD 188 GG P G PG G G G A GG G+ H L H+ A Sbjct: 156 GGGPGGGGPGGGGGGGGPGGGGGAPGGGLLGGSAHPHPHMHGLGHLSHPAAAAAMNMPSG 215 Query: 187 VPRDALPAEA 158 +P L A A Sbjct: 216 LPHPGLVAAA 225
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 82 ALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHM 195 AL L PA P+P + P PGAHP HH+ Sbjct: 250 ALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPHAHHL 287
>POLS2_HUMAN (Q5K4E3) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease| 2) (Protease serine 36) Length = 855 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 12/56 (21%) Frame = +1 Query: 100 PHPA---LPNP-CELAMQARQGPGLRPGAHPEE--------HHMHGRQHLRGPRPG 231 PHP LP C LA R P L PGA E H ++GRQ P PG Sbjct: 432 PHPEHYFLPGSRCRLARWGRGEPALGPGALLEAELLGGWWCHCLYGRQGAAVPLPG 487
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 19/65 (29%) Frame = +1 Query: 70 GLHR---------ALHRLQPHPALPNPCELAM----------QARQGPGLRPGAHPEEHH 192 GLHR A L+P PALP P + A+ +A GP +P A P H Sbjct: 280 GLHREEPDLQPQPASDALRPRPALPPPSKSALLPPPSPRVGKRALPGPSTQPPATPTSPH 339 Query: 193 MHGRQ 207 ++ Sbjct: 340 RRAQE 344
>RTBDN_HUMAN (Q9BSG5) Retbindin precursor| Length = 229 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = +1 Query: 37 RPLRPVAASHHGLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPE 183 RPL+ + HHGL L + + H A P C M + G PG HPE Sbjct: 32 RPLQARSQQHHGLAADLGKGKLHLAGP-CCPSEMDTTETSG--PGNHPE 77
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 28.1 bits (61), Expect = 9.0 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 14/81 (17%) Frame = +1 Query: 61 SHHGLHRALHRL------------QPHPALPNPCE--LAMQARQGPGLRPGAHPEEHHMH 198 +HHG H H +P P +P+P + M R P P HP H Sbjct: 312 AHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPH 371 Query: 199 GRQHLRGPRPGHEQEGADEPP 261 G +RGP P G PP Sbjct: 372 G---MRGPPPLMPPHGYTGPP 389
>PO2F3_RAT (P42571) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) Length = 430 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 9/64 (14%) Frame = +1 Query: 94 LQPHP-ALPNPCELAMQARQGPGL------RPGAHPE--EHHMHGRQHLRGPRPGHEQEG 246 LQP+ + P + + GPGL RPG E H+ QHL GP+ G Sbjct: 115 LQPNLLSFPQQQSTLLLPQTGPGLTSQAVGRPGLSGSSLEPHLEASQHLPGPKHLPGPGG 174 Query: 247 ADEP 258 DEP Sbjct: 175 NDEP 178
>IF6_THEAC (Q9HM16) Translation initiation factor 6 (aIF-6)| Length = 216 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = +2 Query: 230 DMSKRELMNLLLLGAIS-LPTFGMLVPYGSFLVPXXXXXXXXXXXXKDK---LGNDILVE 397 D+ + + N L+G + + + G++VPYGS + KDK +GNDI+ Sbjct: 45 DVRRISIDNSSLIGTMMVMNSNGLIVPYGSEITGLGDLDGRNVLQLKDKINAIGNDIIAN 104 Query: 398 D 400 D Sbjct: 105 D 105
>GALR3_MOUSE (O88853) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 370 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Frame = +1 Query: 64 HHGLHRALHRLQP-------HPALPNPCELAMQARQGPGLRPG 171 HH LHRAL R+QP +P P +M+ R G LR G Sbjct: 317 HHRLHRALRRVQPASSGPAGYPGDARPRGWSMEPR-GDALRGG 358
>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 753 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = +1 Query: 97 QPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHG-RQHLRGPRP 228 QPHP Q Q P P AH +++ G +QH P P Sbjct: 446 QPHPQQIPEAAPVQQPSQQPPQEPSAHQQQYSSRGPQQHRTTPAP 490
>STS_MOUSE (P50427) Steryl-sulfatase precursor (EC 3.1.6.2) (Steroid| sulfatase) (Steryl-sulfate sulfohydrolase) (Arylsulfatase C) (ASC) Length = 624 Score = 28.1 bits (61), Expect = 9.0 Identities = 27/90 (30%), Positives = 32/90 (35%), Gaps = 17/90 (18%) Frame = +1 Query: 37 RPLRPVAASHHG-----------LHRALHRLQPHPALPNPCELAMQ------ARQGPGLR 165 RPL P A H HRA RL+P P P L + G G Sbjct: 520 RPLTPEAEPRHREVLDAIDAAARAHRA--RLRPAPDQLAPRHLMWKPWLQLWGGGGAGGG 577 Query: 166 PGAHPEEHHMHGRQHLRGPRPGHEQEGADE 255 GA + H HG PGH Q+ D+ Sbjct: 578 AGAQDDSGHAHGDGSHAHDDPGHAQDRGDD 607
>PHLA1_RAT (Q9QZA1) Pleckstrin homology-like domain family A member 1| (Proline- and glutamine-rich protein) (PQR protein) Length = 263 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = +1 Query: 97 QPHPAL-PNPCELAMQARQGPGLRPGAHPEEH-HMHGRQHLRGPRPGHEQEGADEP 258 QP P P P +L P L P HP H H H H P P H+ + A +P Sbjct: 194 QPQPQQQPQPQQLHSYPHPHPHLYPHPHPHAHSHPHPHPH---PHP-HQLQHAHQP 245
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = +1 Query: 70 GLHRALHRLQPHPALPNPCELAMQARQGPGLRPGAHPEEHHMHGRQHLRGPRPGHEQEGA 249 G+ + + L PA P P P P HP HH+H P P GA Sbjct: 265 GVVNSYNGLGGPPAAPPP--------PPPPPHPHPHPHAHHLHA---AAAPPPAPPHHGA 313 Query: 250 DEPP 261 PP Sbjct: 314 AAPP 317 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,073,446 Number of Sequences: 219361 Number of extensions: 883408 Number of successful extensions: 3936 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 3596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3894 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
