ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19d24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC069235.23|AC069235 Homo sapiens 12 BAC RP11-173C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90500 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagaggat 542 |||||||||||||||||||||| Sbjct: 1091 ggagaggaagaaggaagaggat 1112
>emb|AL121656.2|CNS01DS6 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 367K01 of library CITB_978_SKB from chromosome 2 of Homo sapiens (Human) Length = 179206 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 527 gaagaaggaagaggatagggaagcaaagatgaag 560 ||||||||||||||||| ||||| ||||||||| Sbjct: 137032 gaagaaggaagaggataaggaagagaagatgaag 136999
>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete sequence Length = 188425 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 216 tcccctgctggagaagtgttctggaacatt 245 |||||||||||||||||| ||| ||||||| Sbjct: 85078 tcccctgctggagaagtgctctagaacatt 85107
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagagga 541 ||||||||||||||||||||| Sbjct: 63450 ggagaggaagaaggaagagga 63430
>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence Length = 192261 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 345 tcaggaagcacttggcagacctgta 369 ||||||||||||||||||| ||||| Sbjct: 73080 tcaggaagcacttggcagagctgta 73104
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gcacgcattggcgcagttcat 89 ||||||||||||||||||||| Sbjct: 2347285 gcacgcattggcgcagttcat 2347305
>ref|NM_022016.1| Mus musculus interphotoreceptor matrix proteoglycan 1 (Impg1), mRNA Length = 3675 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaacagttgttgttcttccag 298 ||||||||||||||||||||| Sbjct: 3141 aaacagttgttgttcttccag 3161
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagagga 541 ||||||||||||||||||||| Sbjct: 127325 ggagaggaagaaggaagagga 127305
>emb|Z84497.1|HSO14 Human DNA sequence from clone XX-O14 on chromosome 6 Contains the BRD2 gene for bromodomain-containing protein 2 (RING3, KIAA9001), ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 40740 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 2495 aagaaggaagagtagagggaagtaaagatgaag 2463
>emb|BX005422.5| Human DNA sequence from clone DASS-32K24 on chromosome 6, complete sequence Length = 97466 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 28514 aagaaggaagagtagagggaagtaaagatgaag 28546
>emb|AL805913.4| Human DNA sequence from clone DAQB-22D21 on chromosome 6 Contains the 3' end of the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for the major histocompatibility complex, class II, DO alpha, the HLA-DPA1 gene for the major histocompatibility complex, class II, DP alpha 1, the RPL32P1 pseudogene for ribosomal protein L32 pseudogene 1, the 3' end of the HLA-DPB1 gene for the major histocompatibility complex, class II, DP beta 1 and 1 CpG isalnd, complete sequence Length = 106728 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 25483 aagaaggaagagtagagggaagtaaagatgaag 25515
>emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on chromosome 6 Contains the HLA-DOA, HLA-DPA1 and HLA-DPB1 genes for major histocompatibility complex class II proteins DO alpha, DP alpha 1 and DP beta 1, the HLA-DPA2 major histocompatibility complex class II DP alpha 2 pseudogene, ribosomal protein L32 pseudogene RPL32P1, a pseudogene similar to part of collagens, the 5' end of an HLA class II histocompatibility antigen D or S beta pseudogene, the 5' end of a novel protein similar to major histocompatibility complex class II DP beta 1 precursor and a CpG island, complete sequence Length = 124899 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 8522 aagaaggaagagtagagggaagtaaagatgaag 8554
>emb|AL662845.5| Human DNA sequence from clone XXbac-136A3 on chromosome 6 contains the HLA-DMB gene for major histocompatibility complex, class II, DM beta, the HLA-DMA gene for major histocompatibility complex, class II, DM alpha, the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for major histocompatibility complex, class II, DO alpha and two CpG islands, complete sequence Length = 97128 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 77995 aagaaggaagagtagagggaagtaaagatgaag 78027
>emb|AL512487.1|SPAC20H4 S.pombe chromosome I cosmid c20H4 Length = 20674 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 actactatcttttccatcagg 349 ||||||||||||||||||||| Sbjct: 20290 actactatcttttccatcagg 20270
>emb|CR936909.2| Human DNA sequence from clone DAMA-214M2 on chromosome 6, complete sequence Length = 40809 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 24708 aagaaggaagagtagagggaagtaaagatgaag 24740
>emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chromosome 6, complete sequence Length = 119898 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 2952 aagaaggaagagtagagggaagtaaagatgaag 2984
>emb|CR759829.6| Human DNA sequence from clone DADB-17J1 on chromosome 6, complete sequence Length = 93292 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 aagaaggaagaggatagggaagcaaagatgaag 560 |||||||||||| | ||||||| |||||||||| Sbjct: 22749 aagaaggaagagtagagggaagtaaagatgaag 22781
>gb|AC161237.8| Mus musculus chromosome 3, clone RP23-307M9, complete sequence Length = 206004 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagga 541 ||||||||||||||||||||| Sbjct: 134552 ggagaggaagaaggaagagga 134572
>emb|AL670884.7| Mouse DNA sequence from clone RP23-372M15 on chromosome 4, complete sequence Length = 143363 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 agaggaagaaggaagaggataggga 547 |||||||||||| |||||||||||| Sbjct: 125438 agaggaagaagggagaggataggga 125414
>gb|AF229929.1|AF229929 Mus musculus sialoprotein associated with cones and rods SPACR mRNA, complete cds Length = 3675 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaacagttgttgttcttccag 298 ||||||||||||||||||||| Sbjct: 3141 aaacagttgttgttcttccag 3161
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 agaggaagaaggaagaggataggga 547 |||||||||||| |||||||||||| Sbjct: 4263 agaggaagaagggagaggataggga 4239
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 345 tcaggaagcacttggcagacctgta 369 ||||||||||||||||||| ||||| Sbjct: 165285 tcaggaagcacttggcagagctgta 165309
>gb|AC161414.3| Mus musculus chromosome 1, clone CH36-500J15, complete sequence Length = 165234 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagga 541 ||||||||||||||||||||| Sbjct: 164762 ggagaggaagaaggaagagga 164782
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 attggcgcagttcatccttg 94 |||||||||||||||||||| Sbjct: 56887 attggcgcagttcatccttg 56906
>ref|NM_200094.1| Danio rerio splicing factor 3a, subunit 1 (sf3a1), mRNA Length = 2769 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 785 gagaggaagaaggaagagga 804
>ref|NM_106085.1| Arabidopsis thaliana heat shock protein binding / nucleic acid binding / unfolded protein binding / zinc ion binding AT1G74250 mRNA, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagaggatagggaa 548 ||||| ||||||||||||||| |||||| Sbjct: 744 ggagaagaagaaggaagaggagagggaa 771
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 179050 ggagaggaagaaggaagagg 179069
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 17577 ggagaggaagaaggaagagg 17596
>ref|XM_519231.1| PREDICTED: Pan troglodytes similar to 28 kDa heat- and acid-stable phosphoprotein (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) (LOC463569), mRNA Length = 975 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 671 ggaagaaggaagaggaaaggaaagcaaa 698
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagaggatagggaag 549 |||||||||||||| ||||| ||||||| Sbjct: 84154 gagaggaagaaggaggaggagagggaag 84181
>gb|AC120388.11| Mus musculus chromosome 9, clone RP24-300P2, complete sequence Length = 157596 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 aacagttgttgttcttccag 298 |||||||||||||||||||| Sbjct: 66298 aacagttgttgttcttccag 66317
>gb|AY589634.1|AY589633S2 Caenorhabditis japonica FOG-1 (fog-1) gene, 3' fragment and complete cds, alternatively spliced Length = 924 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ttcagaaaagaaattcccca 271 |||||||||||||||||||| Sbjct: 536 ttcagaaaagaaattcccca 555
>gb|BC056521.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone MGC:65786 IMAGE:6790606), complete cds Length = 2769 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 785 gagaggaagaaggaagagga 804
>gb|BC000684.2| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:789 IMAGE:3347335), complete cds Length = 1305 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 510 ggaagaaggaagaggaaaggaaagcaaa 537
>gb|BC007873.2| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:14445 IMAGE:4303959), complete cds Length = 1269 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 474 ggaagaaggaagaggaaaggaaagcaaa 501
>gb|AC120006.12| Mus musculus chromosome 19, clone RP24-176M2, complete sequence Length = 181007 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tcagaaaagaaattccccac 272 |||||||||||||||||||| Sbjct: 149964 tcagaaaagaaattccccac 149983
>gb|BC071993.1| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone IMAGE:6421888), partial cds Length = 1304 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 508 ggaagaaggaagaggaaaggaaagcaaa 535
>gb|AC122006.3| Mus musculus BAC clone RP24-344B12 from chromosome 16, complete sequence Length = 156395 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 87650 gagaggaagaaggaagagga 87669
>gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone MGC:77239 IMAGE:6963267), complete cds Length = 2782 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 792 gagaggaagaaggaagagga 811
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ttctggaacatttctctctt 253 |||||||||||||||||||| Sbjct: 115052 ttctggaacatttctctctt 115071
>ref|NM_014891.5| Homo sapiens PDGFA associated protein 1 (PDAP1), mRNA Length = 2383 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 585 ggaagaaggaagaggaaaggaaagcaaa 612
>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence Length = 230097 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 175819 ggagaggaagaaggaagagg 175838
>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence Length = 229184 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 tcttcagaaaagaaattccccact 273 ||||||||||||||||||| |||| Sbjct: 24496 tcttcagaaaagaaattccacact 24473
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 148593 ggagaggaagaaggaagagg 148612
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaaggaagaggatagggaag 549 |||||||||||||||||||| Sbjct: 105885 gaaggaagaggatagggaag 105904
>ref|XM_860794.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 6 (LOC477538), mRNA Length = 2867 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 835 gagaggaagaaggaagagga 854
>ref|XM_860778.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 5 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 808 gagaggaagaaggaagagga 827
>ref|XM_847423.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 2 (LOC477538), mRNA Length = 2843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 811 gagaggaagaaggaagagga 830
>ref|XM_860750.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 4 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 808 gagaggaagaaggaagagga 827
>ref|XM_860739.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 3 (LOC477538), mRNA Length = 2702 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 670 gagaggaagaaggaagagga 689
>ref|XM_534733.2| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 1 (LOC477538), mRNA Length = 2921 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 889 gagaggaagaaggaagagga 908
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence Length = 172879 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 45151 ggagaggaagaaggaagagg 45170
>gb|AC122483.5| Mus musculus BAC clone RP24-366B4 from chromosome 6, complete sequence Length = 185388 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cacaaacagttgttgttctt 294 |||||||||||||||||||| Sbjct: 72287 cacaaacagttgttgttctt 72268
>ref|XM_801219.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511305.20) partial mRNA Length = 3462 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 atgagaagcggattaaggaggagc 615 ||||||||||||||| |||||||| Sbjct: 866 atgagaagcggattatggaggagc 889
>gb|AC132459.3| Mus musculus BAC clone RP23-152I2 from chromosome 14, complete sequence Length = 186486 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 agaggaagaaggaagaggataggg 546 ||||||||||||||||||| |||| Sbjct: 184952 agaggaagaaggaagaggaaaggg 184975
>gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome 19, complete sequence Length = 171122 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tcagaaaagaaattccccac 272 |||||||||||||||||||| Sbjct: 98514 tcagaaaagaaattccccac 98495
>gb|AC125085.4| Mus musculus BAC clone RP24-135G18 from chromosome 8, complete sequence Length = 168721 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 145662 ggagaggaagaaggaagagg 145643
>gb|AC114005.5| Mus musculus BAC clone RP23-179L18 from 8, complete sequence Length = 214732 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 177267 ggagaggaagaaggaagagg 177286
>gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, complete sequence Length = 137132 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 ccaggggttgtgggagaggg 483 |||||||||||||||||||| Sbjct: 44186 ccaggggttgtgggagaggg 44167
>gb|AC144608.10| Medicago truncatula clone mth2-23d2, complete sequence Length = 112000 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 gaagcaaagatgaaggagctgaaa 569 |||||||||||| ||||||||||| Sbjct: 79414 gaagcaaagatgcaggagctgaaa 79437
>gb|AC146560.21| Medicago truncatula clone mth2-12g6, complete sequence Length = 127820 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 63605 gagaggaagaaggaagagga 63624
>emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 103581 ggagaggaagaaggaagagg 103600
>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence Length = 225738 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 17463 ggagaggaagaaggaagagg 17482
>gb|AY337337.1| Tribolium castaneum strain GA-1 cytochrome P450 monooxygenase gene cluster, complete sequence Length = 11784 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 accactactactatgagaag 599 |||||||||||||||||||| Sbjct: 8892 accactactactatgagaag 8911
>emb|AL162232.14| Human DNA sequence from clone RP11-20A20 on chromosome 9 Contains a novel gene, complete sequence Length = 64241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctctcttcagaaaagaaatt 266 |||||||||||||||||||| Sbjct: 55196 ctctcttcagaaaagaaatt 55177
>emb|AL161732.7| Human DNA sequence from clone RP11-52I12 on chromosome 9 Contains the 3' end of the TMEM2 gene for transmembrane protein 2, complete sequence Length = 137391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtgagccaccgcaactcg 128 |||||||||||||||||||| Sbjct: 129989 gtgtgagccaccgcaactcg 130008
>gb|AC164104.5| Mus musculus BAC clone RP23-428G7 from chromosome 6, complete sequence Length = 199234 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cacaaacagttgttgttctt 294 |||||||||||||||||||| Sbjct: 103797 cacaaacagttgttgttctt 103816
>gb|AY116176.1| Borderea chouardii clone Bc1274 microsatellite sequence Length = 435 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 agaggaagaaggaagaggat 542 |||||||||||||||||||| Sbjct: 22 agaggaagaaggaagaggat 3
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tggagaagtgttctggaaca 243 |||||||||||||||||||| Sbjct: 1345914 tggagaagtgttctggaaca 1345933
>gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosome 14, complete sequence Length = 141856 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctccacaaacagttgttgtt 291 |||||||||||||||||||| Sbjct: 111488 ctccacaaacagttgttgtt 111507
>emb|AL121804.2|DMBR7C10 Drosophila melanogaster BAC clone BACR7C10 Length = 56820 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tctctcttcagaaaagaaat 265 |||||||||||||||||||| Sbjct: 38864 tctctcttcagaaaagaaat 38845
>gb|BT007663.1| Synthetic construct Homo sapiens PDGFA associated protein 1 mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 464 ggaagaaggaagaggaaaggaaagcaaa 491
>emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 map 22q22.2-q22.3, complete sequence Length = 164591 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 46181 ggagaggaagaaggaagagg 46200
>emb|AL954239.1| Pan troglodytes chromosome 22 clone PTB-028I09 map 22q22.2-q22.3, complete sequence Length = 141737 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 127127 ggagaggaagaaggaagagg 127146
>gb|AC104140.5| Drosophila melanogaster X BAC RP98-9H13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191342 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tctctcttcagaaaagaaat 265 |||||||||||||||||||| Sbjct: 148312 tctctcttcagaaaagaaat 148293
>emb|CR623254.1| full-length cDNA clone CS0DI002YG11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 983 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 204 ggaagaaggaagaggaaaggaaagcaaa 231
>emb|CR623070.1| full-length cDNA clone CS0DD009YG01 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1212 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 479 ggaagaaggaagaggaaaggaaagcaaa 506
>emb|CR609076.1| full-length cDNA clone CS0DG004YB07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1022 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 453 ggaagaaggaagaggaaaggaaagcaaa 480
>emb|CR609056.1| full-length cDNA clone CS0DI024YA10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1203 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 456 ggaagaaggaagaggaaaggaaagcaaa 483
>emb|CR606062.1| full-length cDNA clone CS0DI007YC19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1266 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 522 ggaagaaggaagaggaaaggaaagcaaa 549
>emb|CR594369.1| full-length cDNA clone CS0DI076YH10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1236 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 491 ggaagaaggaagaggaaaggaaagcaaa 518
>gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274A20, complete sequence Length = 162721 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctccacaaacagttgttgtt 291 |||||||||||||||||||| Sbjct: 49078 ctccacaaacagttgttgtt 49097
>gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376A14, complete sequence Length = 218940 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 97354 ggagaggaagaaggaagagg 97373
>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110001 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 26843 ggaagaaggaagaggaaaggaaagcaaa 26870
>dbj|AP000379.1| Homo sapiens genomic DNA, chromosome 9p21, proximal p16CDKN2A locus Length = 169261 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctctcttcagaaaagaaatt 266 |||||||||||||||||||| Sbjct: 76584 ctctcttcagaaaagaaatt 76565
>gb|AC105390.4| Homo sapiens BAC clone RP11-300M6 from 4, complete sequence Length = 45558 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tgctggagaagtgttctgga 240 |||||||||||||||||||| Sbjct: 5211 tgctggagaagtgttctgga 5230
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gcctgcgcgcgacagcgcag 166 |||||||||||||||||||| Sbjct: 4826 gcctgcgcgcgacagcgcag 4807
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcctgcgcgcgacagcgcag 166 |||||||||||||||||||| Sbjct: 54700 gcctgcgcgcgacagcgcag 54719
>gb|AC154287.2| Mus musculus BAC clone RP24-484I9 from chromosome 14, complete sequence Length = 165637 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 agaggaagaaggaagaggataggg 546 ||||||||||||||||||| |||| Sbjct: 77623 agaggaagaaggaagaggaaaggg 77646
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 aaagaagttgagagaggagg 507 |||||||||||||||||||| Sbjct: 1339991 aaagaagttgagagaggagg 1339972
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 129216 ggagaggaagaaggaagagg 129197
>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence Length = 195151 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 tcttcagaaaagaaattccccact 273 ||||||||||||||||||| |||| Sbjct: 173154 tcttcagaaaagaaattccacact 173131
>dbj|AK079559.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230073I18 product:unclassifiable, full insert sequence Length = 674 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 636 gagaggaagaaggaagagga 617
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcctgcgcgcgacagcgcag 166 |||||||||||||||||||| Sbjct: 11361629 gcctgcgcgcgacagcgcag 11361648
>gb|DQ000554.1| Synthetic construct clone PSF:109061 unknown gene Length = 618 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 536 ggaagaaggaagaggaaaggaaagcaaa 563
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gaaggaagaggatagggaag 549 |||||||||||||||||||| Sbjct: 6807 gaaggaagaggatagggaag 6826
>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 117479 gagaggaagaaggaagagga 117498
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagaggatagggaa 548 ||||| ||||||||||||||| |||||| Sbjct: 31884 ggagaagaagaaggaagaggagagggaa 31857
>gb|AC124287.10| Homo sapiens chromosome 17, clone RP13-991F5, complete sequence Length = 162180 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 aagaagttgagagaggagga 508 |||||||||||||||||||| Sbjct: 117520 aagaagttgagagaggagga 117501
>gb|AF266478.1|AF266478 Mus musculus IPM 150 proteoglycan mRNA, complete cds Length = 3668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 aacagttgttgttcttccag 298 |||||||||||||||||||| Sbjct: 3279 aacagttgttgttcttccag 3298
>gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete sequence Length = 56862 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 aaagaagttgagagaggagg 507 |||||||||||||||||||| Sbjct: 27566 aaagaagttgagagaggagg 27547
>gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, complete sequence Length = 180571 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 ccaggggttgtgggagaggg 483 |||||||||||||||||||| Sbjct: 50238 ccaggggttgtgggagaggg 50219
>gb|BC049511.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone IMAGE:5915856) Length = 1897 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 775 gagaggaagaaggaagagga 794
>gb|AY892434.1| Synthetic construct Homo sapiens clone FLH026077.01L PDGFA associated protein 1 (PDAP1) mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 464 ggaagaaggaagaggaaaggaaagcaaa 491
>gb|AY892433.1| Synthetic construct Homo sapiens clone FLH026076.01L PDGFA associated protein 1 (PDAP1) mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 464 ggaagaaggaagaggaaaggaaagcaaa 491
>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence Length = 174952 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctcttcagaaaagaaattc 267 |||||||||||||||||||| Sbjct: 10487 tctcttcagaaaagaaattc 10506
>emb|AL591213.4| Zebrafish DNA sequence from clone BUSM1-150F13, complete sequence Length = 113551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 18789 gagaggaagaaggaagagga 18808
>gb|AC116817.9| Mus musculus chromosome 1, clone RP24-357I7, complete sequence Length = 186439 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 atttctctcttcagaaaagaaatt 266 |||||| ||||||||||||||||| Sbjct: 169382 atttctttcttcagaaaagaaatt 169405
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tctctcttcagaaaagaaat 265 |||||||||||||||||||| Sbjct: 10063 tctctcttcagaaaagaaat 10044
>gb|AF091847.1|AF091847 Mus musculus otoconin-90 (Oc90) gene, partial cds Length = 8142 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 2910 ggagaggaagaaggaagagg 2891
>gb|AY821802.1| Medicago truncatula respiratory burst oxidase 2 mRNA, partial cds Length = 2685 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 attggcgcagttcatccttg 94 |||||||||||||||||||| Sbjct: 637 attggcgcagttcatccttg 618
>emb|AL929209.17| Mouse DNA sequence from clone RP23-415C3 on chromosome 2, complete sequence Length = 210790 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 83749 gagaggaagaaggaagagga 83730
>dbj|D00509.1|BTVS9VP6 Bluetongue virus gene for VP6, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chromosome 2, complete sequence Length = 171007 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 131191 gagaggaagaaggaagagga 131172
>gb|U55801.1|BVU55801 Bluetongue virus strain BTV 10 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55800.1|BVU55800 Bluetongue virus vaccine strain VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55797.1|BVU55797 Bluetongue virus strain BTV 13 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55795.1|BVU55795 Bluetongue virus strain 17O90X VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55794.1|BVU55794 Bluetongue virus strain 17O81Y VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55793.1|BVU55793 Bluetongue virus strain 17C81W VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55792.1|BVU55792 Bluetongue virus strain 17B90Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55791.1|BVU55791 Bluetongue virus strain 13B89Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55789.1|BVU55789 Bluetongue virus strain 13B81X VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55788.1|BVU55788 Bluetongue virus strain 13B81V VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55787.1|BVU55787 Bluetongue virus strain 11UC8 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55785.1|BVU55785 Bluetongue virus strain 11C81Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55784.1|BVU55784 Bluetongue virus strain 11O81Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55781.1|BVU55781 Bluetongue virus strain 10O80Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55780.1|BVU55780 Bluetongue virus strain 10O80V VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U55778.1|BVU55778 Bluetongue virus strain 10B80Y VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gttgagagaggaggacgcaa 513 |||||||||||||||||||| Sbjct: 622 gttgagagaggaggacgcaa 641
>gb|U41745.1|HSU41745 Human PDGF associated protein mRNA, complete cds Length = 837 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 ggaagaaggaagaggatagggaagcaaa 553 |||||||||||||||| ||| ||||||| Sbjct: 485 ggaagaaggaagaggaaaggaaagcaaa 512
>emb|AL929394.13| Mouse DNA sequence from clone RP23-356H24 on chromosome 4, complete sequence Length = 47222 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 aagaggatagggaagcaaag 554 |||||||||||||||||||| Sbjct: 36242 aagaggatagggaagcaaag 36223
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcctgcgcgcgacagcgcag 166 |||||||||||||||||||| Sbjct: 11368069 gcctgcgcgcgacagcgcag 11368088
>gb|AC005244.1|AC005244 Homo sapiens chromosome 17, clone hRPK.471_L_13, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 11306 gagaggaagaaggaagagga 11325 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 11279 gagaggaagaaggaagagga 11298
>emb|AL773578.1|HS265B9 Homo sapiens chromosome 21 from PAC RP1-265B9 map 21q22.2,D21S349-MX1, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ggagaggaagaaggaagagg 540 |||||||||||||||||||| Sbjct: 29805 ggagaggaagaaggaagagg 29824
>gb|AC126931.4| Mus musculus BAC clone RP23-389M9 from 9, complete sequence Length = 189423 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 13749 gagaggaagaaggaagagga 13730
>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete sequence Length = 241249 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ggagaagtgttctggaacatttct 248 |||| ||||||||||||||||||| Sbjct: 181873 ggagtagtgttctggaacatttct 181896
>emb|AL929263.4| Zebrafish DNA sequence from clone CH211-242M24 in linkage group 8, complete sequence Length = 150413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 66717 gagaggaagaaggaagagga 66736
>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete sequence Length = 194141 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 163 gagaggaagaaggaagagga 182
>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete sequence Length = 150285 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 115362 gagaggaagaaggaagagga 115343
>emb|AL772269.4| Mouse DNA sequence from clone RP23-31K8 on chromosome X, complete sequence Length = 119972 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gagaggaagaaggaagagga 541 |||||||||||||||||||| Sbjct: 118135 gagaggaagaaggaagagga 118154 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,339,768 Number of Sequences: 3902068 Number of extensions: 6339768 Number of successful extensions: 194252 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193732 Number of HSP's gapped (non-prelim): 520 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
