| Clone Name | baal19d11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450593.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1102 Score = 583 bits (294), Expect = e-163 Identities = 513/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 14 ggggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacg 73 |||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 196 ggggaagaagcggaaggcggaggcggcgcggctggaggag-acggacagggcgctgtacg 254 Query: 74 gcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcc 133 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 255 gggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcc 314 Query: 134 agaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatct 193 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 315 agaagctctccttccaggccggcgagcgccacgccatggaaaagctctatgaatggatct 374 Query: 194 taagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagc 253 | || ||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 375 tgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcctcgcacatccagc 434 Query: 254 atgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagcc 313 | ||||| ||||||||||| |||||| | | ||||||||||||||||| ||||||||| Sbjct: 435 acgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaagcc 494 Query: 314 aaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagct 373 |||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | || Sbjct: 495 aaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaaact 554 Query: 374 tatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacg 433 ||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| || | Sbjct: 555 tatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaaatg 614 Query: 434 cactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatg 493 ||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| |||| Sbjct: 615 cactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcgatg 674 Query: 494 caggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcat 553 | || ||||| || |||||| | |||||| | || | |||||||| ||||| |||| Sbjct: 675 cggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgattcat 734 Query: 554 ccatggacatgcattcggacagcccagctcacgactcctnctgag 598 |||||||||||||||| |||||||||||||| ||||| | ||||| Sbjct: 735 ccatggacatgcattcagacagcccagctcatgactcttactgag 779
>dbj|AK071395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095O09, full insert sequence Length = 1102 Score = 583 bits (294), Expect = e-163 Identities = 513/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 14 ggggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacg 73 |||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 196 ggggaagaagcggaaggcggaggcggcgcggctggaggag-acggacagggcgctgtacg 254 Query: 74 gcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcc 133 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 255 gggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcc 314 Query: 134 agaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatct 193 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 315 agaagctctccttccaggccggcgagcgccacgccatggaaaagctctatgaatggatct 374 Query: 194 taagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagc 253 | || ||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 375 tgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcctcgcacatccagc 434 Query: 254 atgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagcc 313 | ||||| ||||||||||| |||||| | | ||||||||||||||||| ||||||||| Sbjct: 435 acgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaagcc 494 Query: 314 aaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagct 373 |||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | || Sbjct: 495 aaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaaact 554 Query: 374 tatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacg 433 ||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| || | Sbjct: 555 tatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaaatg 614 Query: 434 cactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatg 493 ||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| |||| Sbjct: 615 cactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcgatg 674 Query: 494 caggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcat 553 | || ||||| || |||||| | |||||| | || | |||||||| ||||| |||| Sbjct: 675 cggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgattcat 734 Query: 554 ccatggacatgcattcggacagcccagctcacgactcctnctgag 598 |||||||||||||||| |||||||||||||| ||||| | ||||| Sbjct: 735 ccatggacatgcattcagacagcccagctcatgactcttactgag 779
>emb|AJ234562.1|HVU234562 Hordeum vulgare genomic DNA fragment; clone MWG0803 Length = 598 Score = 492 bits (248), Expect = e-136 Identities = 250/251 (99%) Strand = Plus / Plus Query: 384 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 68 Query: 444 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 128 Query: 504 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 188 Query: 564 gcattcggacagcccagctcacgactcctnctgagcagtgctgctacacagagatggaag 623 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 189 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 248 Query: 624 aacagcatgca 634 ||||||||||| Sbjct: 249 aacagcatgca 259
>emb|AJ234450.1|HVU234450 Hordeum vulgare partial mRNA; clone cMWG0770 Length = 594 Score = 492 bits (248), Expect = e-136 Identities = 250/251 (99%) Strand = Plus / Plus Query: 384 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 62 Query: 444 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 122 Query: 504 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 182 Query: 564 gcattcggacagcccagctcacgactcctnctgagcagtgctgctacacagagatggaag 623 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 183 gcattcggacagcccagctcacgactcctcctgagcagtgctgctacacagagatggaag 242 Query: 624 aacagcatgca 634 ||||||||||| Sbjct: 243 aacagcatgca 253
>gb|AY107736.1| Zea mays PCO090313 mRNA sequence Length = 1090 Score = 389 bits (196), Expect = e-105 Identities = 490/587 (83%), Gaps = 1/587 (0%) Strand = Plus / Plus Query: 15 gggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacgg 74 ||||||||||| |||||||||||||| || ||||| ||| ||||||||||| | ||||| Sbjct: 243 gggaagaagcgcaaggcggaggcggcacgcctggaggag-acggaccgggcgctctacgg 301 Query: 75 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 134 || ||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 302 ggccttccggggcgccgccaactcgctctcgcagctctacacgctcggcatgggcgcgca 361 Query: 135 gaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctt 194 |||| ||||||||| |||||||| || |||||||||||||| || |||||||||||| | Sbjct: 362 gaaggcctccttccacgccggcgaacgtcacgccatggaaaaactttatgaatggatcct 421 Query: 195 aagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagca 254 || ||||| |||||||| |||||||| ||||| | |||| ||||||| || ||||||| Sbjct: 422 gaggcagcacgaaaatggtttgaggctaacagttgctgatgtagcctcccatatccagca 481 Query: 255 tgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaagcca 314 |||||||||||||||||| |||||| | | ||||||||||| |||||||| | ||||| Sbjct: 482 tgagattcagtatggaggtgacaatgcatcagcctctccaaggtcacaataccctagcca 541 Query: 315 aagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcgagctt 374 ||||||| | || |||| || ||||||||||||| |||||||||||| | ||||| Sbjct: 542 aagcactgcaccgacaatgcacattcccaacacaagcaaccagcaaccatcgccaagctt 601 Query: 375 atttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgc 434 |||||| ||||||||| |||||||| ||| ||||||| || ||||||||| | ||| Sbjct: 602 atttgcttcaggaaaccctgggttgacacagtccaagaattccatggtcttttcaagcgc 661 Query: 435 actatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgc 494 | ||||||||||| | || ||| |||||| ||| ||||| || || |||| |||||||| Sbjct: 662 attatccagccccatccggcggagcctgccaccttaccacctagagcaggacggggatgc 721 Query: 495 aggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatc 554 ||| ||||| |||||||| |||||| ||| ||||||||||| || || || || Sbjct: 722 agggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgattcgtc 781 Query: 555 catggacatgcattcggacagcccagctcacgactcctnctgagcag 601 |||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 782 catggacatgcactcggacagcccagctcatgactcctactgagcag 828
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 240 bits (121), Expect = 5e-60 Identities = 291/348 (83%) Strand = Plus / Plus Query: 251 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 310 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 11685796 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 11685855 Query: 311 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 370 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 11685856 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 11685915 Query: 371 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 430 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 11685916 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 11685975 Query: 431 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 490 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 11685976 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 11686035 Query: 491 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 550 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 11686036 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 11686095 Query: 551 catccatggacatgcattcggacagcccagctcacgactcctnctgag 598 ||||||||||||||||||| |||||||||||||| ||||| | ||||| Sbjct: 11686096 catccatggacatgcattcagacagcccagctcatgactcttactgag 11686143 Score = 236 bits (119), Expect = 7e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 14 ggggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacg 73 |||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 11681805 ggggaagaagcggaaggcggaggcggcgcggctggaggag-acggacagggcgctgtacg 11681863 Query: 74 gcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcc 133 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 11681864 gggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcc 11681923 Query: 134 agaagctctccttccaggccggcgagcgccacgccatgg 172 ||||||||||||||||||||||||||||||||||||||| Sbjct: 11681924 agaagctctccttccaggccggcgagcgccacgccatgg 11681962 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 171 ggaaaagctgtatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtggg 230 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 11684237 ggaaaagctctatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgc 11684296 Query: 231 tgatatagcctcgcacgtccag 252 |||||||||||||||| ||||| Sbjct: 11684297 tgatatagcctcgcacatccag 11684318
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 240 bits (121), Expect = 5e-60 Identities = 291/348 (83%) Strand = Plus / Plus Query: 251 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 310 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 120430 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 120489 Query: 311 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 370 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 120490 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 120549 Query: 371 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 430 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 120550 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 120609 Query: 431 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 490 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 120610 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 120669 Query: 491 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 550 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 120670 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 120729 Query: 551 catccatggacatgcattcggacagcccagctcacgactcctnctgag 598 ||||||||||||||||||| |||||||||||||| ||||| | ||||| Sbjct: 120730 catccatggacatgcattcagacagcccagctcatgactcttactgag 120777 Score = 236 bits (119), Expect = 7e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 14 ggggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacg 73 |||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 116439 ggggaagaagcggaaggcggaggcggcgcggctggaggag-acggacagggcgctgtacg 116497 Query: 74 gcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcc 133 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 116498 gggcgttccggggcgcggccaactcgctgtcccagctctacacgctcgccatgggcggcc 116557 Query: 134 agaagctctccttccaggccggcgagcgccacgccatgg 172 ||||||||||||||||||||||||||||||||||||||| Sbjct: 116558 agaagctctccttccaggccggcgagcgccacgccatgg 116596 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 171 ggaaaagctgtatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtggg 230 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 118871 ggaaaagctctatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgc 118930 Query: 231 tgatatagcctcgcacgtccag 252 |||||||||||||||| ||||| Sbjct: 118931 tgatatagcctcgcacatccag 118952
>gb|BT018115.1| Zea mays clone EL01N0553H03.c mRNA sequence Length = 1357 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 15 gggaagaagcggaaggcggaggcggcgcggctggacgagnacggaccgggccatgtacgg 74 ||||||||||| |||||||||||||| || ||||| ||| ||||||||||| | ||||| Sbjct: 195 gggaagaagcgcaaggcggaggcggcacgcctggaggag-acggaccgggcgctctacgg 253 Query: 75 cgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggcca 134 || ||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 254 ggccttccggggcgccgccaactcgctctcgcagctctacacgctcggcatgggcgcgca 313 Query: 135 gaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatgaatggatctt 194 |||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||| | Sbjct: 314 gaaggcctccttccacgccggcgaacgccacgccatggaaaaactttatgaatggatcct 373 Query: 195 aagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctc 242 || ||||| |||||||| |||||||| ||||| | |||| ||||||| Sbjct: 374 gaggcagcacgaaaatggtttgaggctaacagttgctgatgtagcctc 421 Score = 198 bits (100), Expect = 2e-47 Identities = 288/351 (82%) Strand = Plus / Plus Query: 251 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 310 |||||||||||||||||||||| |||||| | | ||||||||||| |||||||| | | Sbjct: 770 agcatgagattcagtatggaggtgacaatgcatcagcctctccaaggtcacaatacccta 829 Query: 311 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 370 ||||||||||| | || |||| || ||||||||||||| |||||||||||| | | Sbjct: 830 gccaaagcactgcaccgacaatgcacattcccaacacaagcaaccagcaaccatcgccaa 889 Query: 371 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 430 |||||||||| | ||||||||| |||||||| ||| ||||||| || ||||||||| | Sbjct: 890 gcttatttgctccaggaaaccctgggttgacacagtccaagaattccatggtcttttcaa 949 Query: 431 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 490 |||| ||||||||||| | || ||| |||||||||| ||||| || || |||| |||| Sbjct: 950 gcgcattatccagccccatccggcggagcctgcaaccttaccacctagagcaggacgggg 1009 Query: 491 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 550 ||||||| ||||| |||||||| |||||| ||| ||||||||||| || || | Sbjct: 1010 atgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgatt 1069 Query: 551 catccatggacatgcattcggacagcccagctcacgactcctnctgagcag 601 | |||||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 1070 cgtccatggacatgcactcggacagcccagctcatgactcctactgagcag 1120
>ref|XM_482242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 77 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 136 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 137 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 196 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 197 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 256 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 257 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 316 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 317 catccagcacgagattgagtatggaggtgacaat 350
>ref|XM_507223.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1009 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 98 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 157 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 158 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 217 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 218 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 277 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 278 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 337 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 338 catccagcacgagattgagtatggaggtgacaat 371
>ref|XM_507222.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1358 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 183 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 242 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 243 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 302 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 303 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 362 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 363 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 422 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 423 catccagcacgagattgagtatggaggtgacaat 456
>dbj|AK109817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A02, full insert sequence Length = 1358 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 183 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 242 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 243 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 302 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 303 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 362 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 363 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 422 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 423 catccagcacgagattgagtatggaggtgacaat 456
>dbj|AK098973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E18, full insert sequence Length = 913 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 77 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 136 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 137 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 196 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 197 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 256 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 257 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 316 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 317 catccagcacgagattgagtatggaggtgacaat 350
>dbj|AK060114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D12, full insert sequence Length = 1009 Score = 141 bits (71), Expect = 3e-30 Identities = 223/274 (81%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 98 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 157 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 158 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 217 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgccatggaaaagctgtatga 185 | | |||| ||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 218 tgcccaccagcgcctctccttccacgccggtgagcgccacgccttggaaaaactctacca 277 Query: 186 atggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgca 245 ||||| | |||||||||||| |||||||||||| ||||| ||| ||||| || || Sbjct: 278 gtggatggtgcgacagcatgaaattggcttgaggctcacagtatctgacatagcatccca 337 Query: 246 cgtccagcatgagattcagtatggaggcgacaat 279 | ||||||| |||||| |||||||||| |||||| Sbjct: 338 catccagcacgagattgagtatggaggtgacaat 371
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 95.6 bits (48), Expect = 2e-16 Identities = 134/163 (82%), Gaps = 5/163 (3%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 18949744 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 18949803 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 18949804 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 18949863 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgcc 168 | | |||| ||||||||||| ||||| |||||||||||| Sbjct: 18949864 tgcccaccagcgcctctccttccacgccggtgagcgccacgcc 18949906 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 gacagcatgaaaatggcttgaggctgacagt 227 |||||||||||| |||||||||||| ||||| Sbjct: 18951508 gacagcatgaaattggcttgaggctcacagt 18951538
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 95.6 bits (48), Expect = 2e-16 Identities = 134/163 (82%), Gaps = 5/163 (3%) Strand = Plus / Plus Query: 11 ggcggggaagaagcggaaggcggaggcggcgcggctggacgagnacg-----gaccgggc 65 |||||||| ||||||||||||||||||||||||| || ||| | | |||||||| Sbjct: 34664 ggcggggaggaagcggaaggcggaggcggcgcgggcggcggaggaggaggccgaccgggc 34723 Query: 66 catgtacggcgcgttccggggcgccgccaactcgctctcgcagctctacacgctcgccat 125 | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 34724 gctctacggcgccttccgcggcgccgccaactcgctctcgcagctctacgcgctcgccgg 34783 Query: 126 gggcggccagaagctctccttccaggccggcgagcgccacgcc 168 | | |||| ||||||||||| ||||| |||||||||||| Sbjct: 34784 tgcccaccagcgcctctccttccacgccggtgagcgccacgcc 34826 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 gacagcatgaaaatggcttgaggctgacagt 227 |||||||||||| |||||||||||| ||||| Sbjct: 36428 gacagcatgaaattggcttgaggctcacagt 36458
>ref|NM_192567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 76 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 135 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 136 ttccaggccggcgagcgccac 156
>dbj|AK061874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A07, full insert sequence Length = 977 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 175 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 234 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 235 ttccaggccggcgagcgccac 255
>dbj|AB110176.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPG014 Length = 1095 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 210 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 269 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 270 ttccaggccggcgagcgccac 290
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 22994226 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 22994167 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 22994166 ttccaggccggcgagcgccac 22994146 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 76 gcgttccggggcgccgccaactcgctctcgcag 108 |||||| |||||||||||||| |||| |||||| Sbjct: 4325748 gcgttcaggggcgccgccaacgcgctgtcgcag 4325780
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 64632 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 64573 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 64572 ttccaggccggcgagcgccac 64552
>dbj|AK099494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027F04, full insert sequence Length = 1095 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 228 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 287 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 288 ttccaggccggcgagcgccac 308
>dbj|AK066191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051C07, full insert sequence Length = 2598 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 |||||||||||||| ||||| ||||||||||| | ||||||| | |||||||||||| Sbjct: 195 ggcgccgccaactccctctcccagctctacacccaggccatggcccagcagaagctctcc 254 Query: 145 ttccaggccggcgagcgccac 165 ||||||||||||||||||||| Sbjct: 255 ttccaggccggcgagcgccac 275
>gb|AF479038.1| Triticum aestivum holocarboxylase synthetase mRNA, partial cds Length = 627 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 85 ggcgccgccaactcgctctcgcagctctacacgctcgccatgggcggccagaagctctcc 144 ||||||||||| || ||||| ||||| ||| | | ||||||| | |||||||||||| Sbjct: 100 ggcgccgccaattccctctcccagctatactcccaggccatggcccagcagaagctctcc 159 Query: 145 ttccaggccggcgagcgccacgccatggaaaagct 179 |||||||| |||||||| |||||| | |||||||| Sbjct: 160 ttccaggctggcgagcggcacgccctcgaaaagct 194
>ref|NM_125874.2| Arabidopsis thaliana unknown protein AT5G64780 mRNA, complete cds Length = 839 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 65 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 113 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 223 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 271
>gb|AY091256.1| Arabidopsis thaliana unknown protein (At5g64780) mRNA, complete cds Length = 559 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 65 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 113 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 53 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 101
>gb|AY074385.1| Arabidopsis thaliana unknown protein (At5g64780) mRNA, complete cds Length = 886 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 65 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 113 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 223 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 271
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7 Length = 39645 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 65 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 113 ||||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 38883 ccatgtatggcgcgtttcgaggcgctgctaattcgctctcgcagctcta 38835
>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence Length = 185393 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 gcatgaaaatggcttgaggctga 223 ||||||||||||||||||||||| Sbjct: 132570 gcatgaaaatggcttgaggctga 132548
>ref|XM_550412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 76 gcgttccggggcgccgccaactcgctctcgcag 108 |||||| |||||||||||||| |||| |||||| Sbjct: 73 gcgttcaggggcgccgccaacgcgctgtcgcag 105
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 Length = 207355 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cttccaggccggcgagcgcca 164 ||||||||||||||||||||| Sbjct: 124344 cttccaggccggcgagcgcca 124324
>gb|AC098861.2| Homo sapiens BAC clone RP11-297J2 from 4, complete sequence Length = 185791 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 aaaagctgtatgaatggatct 193 ||||||||||||||||||||| Sbjct: 112631 aaaagctgtatgaatggatct 112611
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ggcggaggcggcgcggctgga 49 ||||||||||||||||||||| Sbjct: 12785904 ggcggaggcggcgcggctgga 12785884
>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome Length = 11930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccttccaggccggcgagcgcc 163 ||||||||||||||||||||| Sbjct: 3277 ccttccaggccggcgagcgcc 3257
>gb|AY085304.1| Arabidopsis thaliana clone 144066 mRNA, complete sequence Length = 779 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 65 ccatgtacggcgcgttccggggcgccgccaactcgctctcgcagctcta 113 ||||||| | |||||| || ||||| || || ||||||||||||||||| Sbjct: 162 ccatgtatgacgcgtttcgaggcgctgctaattcgctctcgcagctcta 210
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 76 gcgttccggggcgccgccaactcgctctcgcag 108 |||||| |||||||||||||| |||| |||||| Sbjct: 105518 gcgttcaggggcgccgccaacgcgctgtcgcag 105550
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ggcggaggcggcgcggctgga 49 ||||||||||||||||||||| Sbjct: 44028 ggcggaggcggcgcggctgga 44008
>emb|X84647.1|ATLEUCD A.teichomyceticus leuC and leuD genes Length = 2982 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ccggcgagcgccacgccatgg 172 ||||||||||||||||||||| Sbjct: 554 ccggcgagcgccacgccatgg 534
>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence Length = 182866 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 gctgctacacagagatggaa 622 |||||||||||||||||||| Sbjct: 128727 gctgctacacagagatggaa 128746
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ccttccaggccggcgagcgccacg 166 |||||||||||||||||| ||||| Sbjct: 107606 ccttccaggccggcgagctccacg 107583
>ref|XM_523884.1| PREDICTED: Pan troglodytes similar to Transcription factor GATA-6 (GATA binding factor-6) (LOC468495), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggcggaggcggcgcggctgg 48 |||||||||||||||||||| Sbjct: 667 ggcggaggcggcgcggctgg 686
>ref|XM_873057.1| PREDICTED: Bos taurus hypothetical protein LOC613525 (LOC613525), mRNA Length = 995 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gggaagaagcggaaggcggaggcggcgc 42 |||| |||||||||||| |||||||||| Sbjct: 428 gggaggaagcggaaggccgaggcggcgc 455
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaggcggcgcggctggacga 52 |||||||||||||||||||| Sbjct: 12096702 gaggcggcgcggctggacga 12096721
>ref|XM_543327.2| PREDICTED: Canis familiaris similar to kinesin family member 1B (LOC486202), mRNA Length = 5076 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cggaggcggcgcggctggac 50 |||||||||||||||||||| Sbjct: 2392 cggaggcggcgcggctggac 2373
>emb|BX548019.36| Zebrafish DNA sequence from clone DKEY-20D1 in linkage group 6, complete sequence Length = 202848 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aagacagcatgaaaatggct 214 |||||||||||||||||||| Sbjct: 121819 aagacagcatgaaaatggct 121800
>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tccaagatcacaatatgcaa 310 |||||||||||||||||||| Sbjct: 112070 tccaagatcacaatatgcaa 112051
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 ccttccaggccggcgagcgccacg 166 |||||||||||||||||| ||||| Sbjct: 35404 ccttccaggccggcgagctccacg 35381
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 ccgtgcgccggggcctgcaaccat 469 ||||||||||||||||||| |||| Sbjct: 715484 ccgtgcgccggggcctgcacccat 715507
>emb|AL159151.56| Human DNA sequence from clone RP11-156O2 on chromosome 13, complete sequence Length = 59116 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 acacagagatggaagaacag 628 |||||||||||||||||||| Sbjct: 45286 acacagagatggaagaacag 45267
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggctgacagtgggtgatata 237 |||||||||||||||||||| Sbjct: 135741 ggctgacagtgggtgatata 135722
>gb|AC016919.15| Homo sapiens 3 BAC RP11-220J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcaagccaaagcactcaggc 326 |||||||||||||||||||| Sbjct: 140245 gcaagccaaagcactcaggc 140226
>emb|X82362.1|AOHIS2B A.officinalis mRNA for histone 2B Length = 492 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 gcggggaagaagcggaaggcggag 35 ||||||||||||| |||||||||| Sbjct: 84 gcggggaagaagccgaaggcggag 107
>emb|X58831.1|CSGDHANC C.sorokiniana gdhANC gene for NADP-specific glutamate dehydrogenase (ANC=Ammonium-inducible, Nuclear encoded, Chloroplastic isoenzyme) Length = 9872 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 cgactcatccatggacatgc 565 |||||||||||||||||||| Sbjct: 9375 cgactcatccatggacatgc 9356
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aggcggggaagaagcggaag 29 |||||||||||||||||||| Sbjct: 34172 aggcggggaagaagcggaag 34153
>gb|AE005970.1| Caulobacter crescentus CB15 section 296 of 359 of the complete genome Length = 12680 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggcggaggcggcgcggctgg 48 |||||||||||||||||||| Sbjct: 12126 ggcggaggcggcgcggctgg 12107
>emb|BX571699.10| Zebrafish DNA sequence from clone DKEYP-116G9 in linkage group 6, complete sequence Length = 173467 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aagacagcatgaaaatggct 214 |||||||||||||||||||| Sbjct: 22637 aagacagcatgaaaatggct 22656
>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds Length = 11462 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggcggaggcggcgcggctgg 48 |||||||||||||||||||| Sbjct: 6209 ggcggaggcggcgcggctgg 6228
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaggcggcgcggctggacga 52 |||||||||||||||||||| Sbjct: 12093465 gaggcggcgcggctggacga 12093484
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaggcggcgcggctggacga 52 |||||||||||||||||||| Sbjct: 117282 gaggcggcgcggctggacga 117301
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ttccaggccggcgagcgcca 164 |||||||||||||||||||| Sbjct: 2734348 ttccaggccggcgagcgcca 2734329
>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence Length = 185967 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggaaggcggaggcggcgcgg 44 |||||||||||||||||||| Sbjct: 84978 ggaaggcggaggcggcgcgg 84959
>emb|BX004878.8| Zebrafish DNA sequence from clone DKEY-11H2 in linkage group 6, complete sequence Length = 254657 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aagacagcatgaaaatggct 214 |||||||||||||||||||| Sbjct: 184424 aagacagcatgaaaatggct 184443
>gb|U84003.1|HSTSBIN5 Homo sapiens bridging integrator protein-1 (BIN1) gene, exons 7-12 Length = 8310 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggaaggcggaggcggcgcgg 44 |||||||||||||||||||| Sbjct: 4258 ggaaggcggaggcggcgcgg 4277
>dbj|AK116758.1| Ciona intestinalis cDNA, clone:ciad081o15, full insert sequence Length = 1921 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccatggaaaagctgtatgaa 186 |||||||||||||||||||| Sbjct: 1381 ccatggaaaagctgtatgaa 1400
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gaggctgacagtgggtgata 235 |||||||||||||||||||| Sbjct: 159286 gaggctgacagtgggtgata 159267
>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13, complete sequence Length = 96887 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gaggctgacagtgggtgata 235 |||||||||||||||||||| Sbjct: 60479 gaggctgacagtgggtgata 60460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,275,014 Number of Sequences: 3902068 Number of extensions: 4275014 Number of successful extensions: 86899 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86314 Number of HSP's gapped (non-prelim): 572 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)