ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18o03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 6e-62
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
3dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
4dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
5dbj|AK108411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 9e-58
6ref|XM_473489.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
7emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 96 1e-16
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 ... 68 3e-08
10gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II sectio... 68 3e-08
11gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 geno... 52 0.002
12ref|NM_106508.2| Arabidopsis thaliana unknown protein AT1G78610 ... 50 0.007
13ref|NM_104225.1| Arabidopsis thaliana unknown protein AT1G53470 ... 50 0.007
14emb|AJ234472.1|HVU234472 Hordeum vulgare genomic DNA fragment; c... 46 0.11
15ref|NM_127254.3| Arabidopsis thaliana unknown protein AT2G17010 ... 44 0.44
16gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, co... 42 1.7
17gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22... 42 1.7
18gb|AC090156.10| Homo sapiens chromosome 11, clone RP11-202M19, c... 42 1.7
19gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thali... 42 1.7
20ref|NM_192797.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
21ref|XM_445739.1| Candida glabrata CBS138, CAGL0E01177g partial mRNA 40 6.8
22gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, com... 40 6.8
23emb|AL121934.18|HSBA209A2 Human DNA sequence from clone RP11-209... 40 6.8
24emb|CR380951.1| Candida glabrata strain CBS138 chromosome E comp... 40 6.8
25emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chro... 40 6.8
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
27dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
28emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chr... 40 6.8
29dbj|AK073157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8

>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full
            insert sequence
          Length = 3349

 Score =  246 bits (124), Expect = 6e-62
 Identities = 223/256 (87%)
 Strand = Plus / Plus

                                                                        
Query: 235  agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294
            ||||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| |
Sbjct: 1877 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 1936

                                                                        
Query: 295  catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354
            | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 1937 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 1996

                                                                        
Query: 355  agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414
            ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 1997 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 2056

                                                                        
Query: 415  atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474
            |||| ||  || | || ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 2057 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 2116

                            
Query: 475  acatatacttggcaga 490
            | ||||||||| ||||
Sbjct: 2117 atatatacttgtcaga 2132



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 93/109 (85%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60
            |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || 
Sbjct: 1647 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 1705

                                                             
Query: 61   acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109
            |  | ||||| ||| ||| |||||| ||||| ||||| |||||||||||
Sbjct: 1706 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 1754



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  232 bits (117), Expect = 9e-58
 Identities = 210/241 (87%)
 Strand = Plus / Plus

                                                                            
Query: 235      agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294
                ||||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| |
Sbjct: 27138373 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 27138432

                                                                            
Query: 295      catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354
                | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 27138433 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 27138492

                                                                            
Query: 355      agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414
                ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 27138493 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 27138552

                                                                            
Query: 415      atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474
                |||| ||  || | || ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 27138553 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 27138612

                 
Query: 475      a 475
                |
Sbjct: 27138613 a 27138613



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 93/109 (85%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60
                |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || 
Sbjct: 27138143 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 27138201

                                                                 
Query: 61       acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109
                |  | ||||| ||| ||| |||||| ||||| ||||| |||||||||||
Sbjct: 27138202 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 27138250



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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score =  232 bits (117), Expect = 9e-58
 Identities = 210/241 (87%)
 Strand = Plus / Plus

                                                                         
Query: 235   agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294
             ||||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| |
Sbjct: 34822 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 34881

                                                                         
Query: 295   catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354
             | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 34882 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 34941

                                                                         
Query: 355   agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414
             ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 34942 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 35001

                                                                         
Query: 415   atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474
             |||| ||  || | || ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 35002 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 35061

              
Query: 475   a 475
             |
Sbjct: 35062 a 35062



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 93/109 (85%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60
             |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || 
Sbjct: 34592 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 34650

                                                              
Query: 61    acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109
             |  | ||||| ||| ||| |||||| ||||| ||||| |||||||||||
Sbjct: 34651 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 34699



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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score =  232 bits (117), Expect = 9e-58
 Identities = 210/241 (87%)
 Strand = Plus / Plus

                                                                          
Query: 235    agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294
              ||||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| |
Sbjct: 110022 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 110081

                                                                          
Query: 295    catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354
              | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 110082 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 110141

                                                                          
Query: 355    agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414
              ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 110142 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 110201

                                                                          
Query: 415    atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474
              |||| ||  || | || ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 110202 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 110261

               
Query: 475    a 475
              |
Sbjct: 110262 a 110262



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 93/109 (85%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60
              |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || 
Sbjct: 109792 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 109850

                                                               
Query: 61     acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109
              |  | ||||| ||| ||| |||||| ||||| ||||| |||||||||||
Sbjct: 109851 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 109899



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>dbj|AK108411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H02, full
           insert sequence
          Length = 864

 Score =  232 bits (117), Expect = 9e-58
 Identities = 210/241 (87%)
 Strand = Plus / Plus

                                                                       
Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294
           ||||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| |
Sbjct: 407 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 466

                                                                       
Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354
           | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 467 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 526

                                                                       
Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414
           ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||||
Sbjct: 527 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 586

                                                                       
Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474
           |||| ||  || | || ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 587 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 646

            
Query: 475 a 475
           |
Sbjct: 647 a 647



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 93/109 (85%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60
           |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || 
Sbjct: 177 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 235

                                                            
Query: 61  acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109
           |  | ||||| ||| ||| |||||| ||||| ||||| |||||||||||
Sbjct: 236 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 284



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>ref|XM_473489.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2805

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                        
Query: 246  gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305
            |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 1678 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 1737

                                                                        
Query: 306  aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365
            |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 1738 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 1797

                            
Query: 366  caggcaacgggagagg 381
            || ||||| |||||||
Sbjct: 1798 catgcaaccggagagg 1813



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                               
Query: 5    ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55
            ||||||||||| |||||||| ||||||||| || |||||||| || |||||
Sbjct: 1423 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 1472



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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 246   gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305
             |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 73587 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 73646

                                                                         
Query: 306   aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365
             |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 73647 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 73706

                             
Query: 366   caggcaacgggagagg 381
             || ||||| |||||||
Sbjct: 73707 catgcaaccggagagg 73722



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                
Query: 5     ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55
             ||||||||||| |||||||| ||||||||| || |||||||| || |||||
Sbjct: 73332 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 73381



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                            
Query: 246      gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305
                |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 28066361 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 28066420

                                                                            
Query: 306      aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365
                |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 28066421 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 28066480

                                
Query: 366      caggcaacgggagagg 381
                || ||||| |||||||
Sbjct: 28066481 catgcaaccggagagg 28066496



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                   
Query: 5        ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55
                ||||||||||| |||||||| ||||||||| || |||||||| || |||||
Sbjct: 28066106 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 28066155



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>ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 mRNA, complete cds
          Length = 2550

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 276  aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325
            |||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct: 1420 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 1469



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>gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II section 98 of 255 of the complete
             sequence. Sequence from clones F12A24, F6P23
          Length = 90952

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 276   aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325
             |||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct: 14835 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 14786



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 267   cacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325
             |||||| | ||||| || ||| |||| || |||||||||||||| || |||||||||||
Sbjct: 18508 cacaggatgaatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 18450



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>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete
             sequence
          Length = 78378

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 438   aagatctttcataatgtggctaagcctggatccaagta 475
             ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 20227 aagatctttcataatgttgctaagccaggatcaaagta 20264



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 294   gcatggaacatgaagaggctgatgaa 319
             |||||||| |||||||||||||||||
Sbjct: 20086 gcatggaaaatgaagaggctgatgaa 20111



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>ref|NM_106508.2| Arabidopsis thaliana unknown protein AT1G78610 mRNA, complete cds
          Length = 2767

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 438  aagatctttcataatgtggctaagcctggatccaagt 474
            ||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1606 aagatctttcataatgttgctaagccaggatcaaagt 1642



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 294  gcatggaacatgaagaggctgatgaa 319
            |||||||| |||||||||||||||||
Sbjct: 1465 gcatggaaaatgaagaggctgatgaa 1490



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>ref|NM_104225.1| Arabidopsis thaliana unknown protein AT1G53470 mRNA, complete cds
          Length = 2646

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 437  gaagatctttcataatgtggctaagcctggatccaagtacatata 481
            |||||| ||||| ||||| ||| |||||||||||| |||||||||
Sbjct: 1689 gaagatttttcagaatgttgctgagcctggatccaggtacatata 1733



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>emb|AJ234472.1|HVU234472 Hordeum vulgare genomic DNA fragment; clone MWG0503
          Length = 654

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 agctccacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaaga 321
           ||||||||| ||| || ||||| ||| |||| || |||| |||||||||||| |||| ||
Sbjct: 139 agctccacaagctgaaccagaagaacatctctgcgtggagcatgaagaggctaatgagga 198

                  
Query: 322 ttgttcg 328
           | |||||
Sbjct: 199 tcgttcg 205



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 432 gccaagaagatctttcataatgtggctaagcctggatccaagta 475
           ||||||||||| || || ||||| || || ||||||||||||||
Sbjct: 310 gccaagaagattttccacaatgtcgccaaacctggatccaagta 353



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>ref|NM_127254.3| Arabidopsis thaliana unknown protein AT2G17010 mRNA, complete cds
          Length = 2404

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 276  aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325
            ||||| || ||| |||| || |||||||||||||| || |||||||||||
Sbjct: 1234 aatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 1283



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>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence
          Length = 215308

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 328    gttttgggacgctcaccacaatgga 352
              ||||||||| |||||||||||||||
Sbjct: 214986 gttttgggatgctcaccacaatgga 215010



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>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete
              sequence
          Length = 111936

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 437    gaagatctttcataatgtggctaagcctggatccaagtacatata 481
              |||||| ||||| ||||| ||| |||||||||||| ||| |||||
Sbjct: 111910 gaagatttttcagaatgttgctgagcctggatccaggtatatata 111866



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>gb|AC090156.10| Homo sapiens chromosome 11, clone RP11-202M19, complete sequence
          Length = 45120

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 328  gttttgggacgctcaccacaatgga 352
            ||||||||| |||||||||||||||
Sbjct: 4839 gttttgggatgctcaccacaatgga 4863



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>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 99960

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 437   gaagatctttcataatgtggctaagcctggatccaagtacatata 481
             |||||| ||||| ||||| ||| |||||||||||| ||| |||||
Sbjct: 70816 gaagatttttcagaatgttgctgagcctggatccaggtatatata 70772



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>ref|NM_192797.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 tgtcaaaggagaagaaacag 230
           ||||||||||||||||||||
Sbjct: 300 tgtcaaaggagaagaaacag 281



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>ref|XM_445739.1| Candida glabrata CBS138, CAGL0E01177g partial mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  cgaagactacgtgcttgccg 72
           ||||||||||||||||||||
Sbjct: 382 cgaagactacgtgcttgccg 363



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>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence
          Length = 189250

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   ctccacaggctcaatcagaa 283
             ||||||||||||||||||||
Sbjct: 67457 ctccacaggctcaatcagaa 67476



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>emb|AL121934.18|HSBA209A2 Human DNA sequence from clone RP11-209A2 on chromosome 6 Contains a 60S
             ribosomal protein L10 (RPL10) pseudogene, STSs and GSSs,
             complete sequence
          Length = 49261

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   gccaagaagatctttcataa 451
             ||||||||||||||||||||
Sbjct: 32197 gccaagaagatctttcataa 32178



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>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     cgaagactacgtgcttgccg 72
              ||||||||||||||||||||
Sbjct: 107506 cgaagactacgtgcttgccg 107487



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>emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chromosome 11 Contains a
             zinc finger protein pseudogene, a chaperonin subunit 7
             (eta) (Cct7) pseudogene, a novel pseudogene and a CpG
             island, complete sequence
          Length = 217352

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   caaaggagaagaaacagcgtgaga 237
             ||||| ||||||||||||||||||
Sbjct: 79819 caaagtagaagaaacagcgtgaga 79842



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      tgtcaaaggagaagaaacag 230
                ||||||||||||||||||||
Sbjct: 24478301 tgtcaaaggagaagaaacag 24478282



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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0686E09
          Length = 156425

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tgtcaaaggagaagaaacag 230
             ||||||||||||||||||||
Sbjct: 58685 tgtcaaaggagaagaaacag 58666



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>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete
              sequence
          Length = 249562

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gattgatgaagggatcacca 255
              ||||||||||||||||||||
Sbjct: 173857 gattgatgaagggatcacca 173838



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>dbj|AK073157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012O14, full
           insert sequence
          Length = 1196

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 tgtcaaaggagaagaaacag 230
           ||||||||||||||||||||
Sbjct: 424 tgtcaaaggagaagaaacag 405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,329,288
Number of Sequences: 3902068
Number of extensions: 3329288
Number of successful extensions: 59171
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59040
Number of HSP's gapped (non-prelim): 126
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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