| Clone Name | baal18o03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full insert sequence Length = 3349 Score = 246 bits (124), Expect = 6e-62 Identities = 223/256 (87%) Strand = Plus / Plus Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294 ||||||| || |||||||||||||||||||| || | ||||| |||||||| |||| | Sbjct: 1877 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 1936 Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354 | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| | Sbjct: 1937 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 1996 Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414 ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||| Sbjct: 1997 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 2056 Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474 |||| || || | || ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 2057 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 2116 Query: 475 acatatacttggcaga 490 | ||||||||| |||| Sbjct: 2117 atatatacttgtcaga 2132 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 1 attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60 |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || Sbjct: 1647 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 1705 Query: 61 acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109 | | ||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 1706 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 1754
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 232 bits (117), Expect = 9e-58 Identities = 210/241 (87%) Strand = Plus / Plus Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294 ||||||| || |||||||||||||||||||| || | ||||| |||||||| |||| | Sbjct: 27138373 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 27138432 Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354 | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| | Sbjct: 27138433 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 27138492 Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414 ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||| Sbjct: 27138493 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 27138552 Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474 |||| || || | || ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 27138553 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 27138612 Query: 475 a 475 | Sbjct: 27138613 a 27138613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 1 attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60 |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || Sbjct: 27138143 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 27138201 Query: 61 acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109 | | ||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 27138202 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 27138250
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 232 bits (117), Expect = 9e-58 Identities = 210/241 (87%) Strand = Plus / Plus Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294 ||||||| || |||||||||||||||||||| || | ||||| |||||||| |||| | Sbjct: 34822 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 34881 Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354 | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| | Sbjct: 34882 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 34941 Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414 ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||| Sbjct: 34942 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 35001 Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474 |||| || || | || ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 35002 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 35061 Query: 475 a 475 | Sbjct: 35062 a 35062 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 1 attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60 |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || Sbjct: 34592 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 34650 Query: 61 acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109 | | ||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 34651 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 34699
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 232 bits (117), Expect = 9e-58 Identities = 210/241 (87%) Strand = Plus / Plus Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294 ||||||| || |||||||||||||||||||| || | ||||| |||||||| |||| | Sbjct: 110022 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 110081 Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354 | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| | Sbjct: 110082 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 110141 Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414 ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||| Sbjct: 110142 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 110201 Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474 |||| || || | || ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 110202 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 110261 Query: 475 a 475 | Sbjct: 110262 a 110262 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 1 attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60 |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || Sbjct: 109792 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 109850 Query: 61 acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109 | | ||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 109851 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 109899
>dbj|AK108411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H02, full insert sequence Length = 864 Score = 232 bits (117), Expect = 9e-58 Identities = 210/241 (87%) Strand = Plus / Plus Query: 235 agattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcgg 294 ||||||| || |||||||||||||||||||| || | ||||| |||||||| |||| | Sbjct: 407 agattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcag 466 Query: 295 catggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacg 354 | ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| | Sbjct: 467 cttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatg 526 Query: 355 agcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaat 414 ||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||| Sbjct: 527 agcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaat 586 Query: 415 atgaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagt 474 |||| || || | || ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 587 atgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagt 646 Query: 475 a 475 | Sbjct: 647 a 647 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 1 attgttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacgaagact 60 |||||||||||||| |||||||||| |||||||| |||||||| || ||||||||| || Sbjct: 177 attgttcaaccagtttgtcatcgag-acgctctccgggccgcccctagttgacgaaaacc 235 Query: 61 acgtgcttgccgaggtgcgtgagctgcaacgggcaggcgcaaccatccc 109 | | ||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 236 aattccttgctgagatgcatgagcttcaacgcgcaggagcaaccatccc 284
>ref|XM_473489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2805 Score = 95.6 bits (48), Expect = 1e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 246 gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305 |||||||| || ||| |||| |||||||| | ||||| ||| |||| || |||| |||| Sbjct: 1678 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 1737 Query: 306 aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365 |||||| |||||||||||||||||| ||| |||| ||||| |||||||||||||| || Sbjct: 1738 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 1797 Query: 366 caggcaacgggagagg 381 || ||||| ||||||| Sbjct: 1798 catgcaaccggagagg 1813 Score = 46.1 bits (23), Expect = 0.11 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 5 ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55 ||||||||||| |||||||| ||||||||| || |||||||| || ||||| Sbjct: 1423 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 1472
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 95.6 bits (48), Expect = 1e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 246 gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305 |||||||| || ||| |||| |||||||| | ||||| ||| |||| || |||| |||| Sbjct: 73587 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 73646 Query: 306 aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365 |||||| |||||||||||||||||| ||| |||| ||||| |||||||||||||| || Sbjct: 73647 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 73706 Query: 366 caggcaacgggagagg 381 || ||||| ||||||| Sbjct: 73707 catgcaaccggagagg 73722 Score = 46.1 bits (23), Expect = 0.11 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 5 ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55 ||||||||||| |||||||| ||||||||| || |||||||| || ||||| Sbjct: 73332 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 73381
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 246 gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 305 |||||||| || ||| |||| |||||||| | ||||| ||| |||| || |||| |||| Sbjct: 28066361 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 28066420 Query: 306 aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 365 |||||| |||||||||||||||||| ||| |||| ||||| |||||||||||||| || Sbjct: 28066421 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 28066480 Query: 366 caggcaacgggagagg 381 || ||||| ||||||| Sbjct: 28066481 catgcaaccggagagg 28066496 Score = 46.1 bits (23), Expect = 0.11 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 5 ttcaaccagtatgtcatcgaggacgctctctgggccgccgcttgttgacga 55 ||||||||||| |||||||| ||||||||| || |||||||| || ||||| Sbjct: 28066106 ttcaaccagtacgtcatcga-gacgctctccggcccgccgctggtcgacga 28066155
>ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 mRNA, complete cds Length = 2550 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 276 aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325 |||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 1420 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 1469
>gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II section 98 of 255 of the complete sequence. Sequence from clones F12A24, F6P23 Length = 90952 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 276 aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325 |||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 14835 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 14786 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 267 cacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325 |||||| | ||||| || ||| |||| || |||||||||||||| || ||||||||||| Sbjct: 18508 cacaggatgaatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 18450
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 438 aagatctttcataatgtggctaagcctggatccaagta 475 ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 20227 aagatctttcataatgttgctaagccaggatcaaagta 20264 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 gcatggaacatgaagaggctgatgaa 319 |||||||| ||||||||||||||||| Sbjct: 20086 gcatggaaaatgaagaggctgatgaa 20111
>ref|NM_106508.2| Arabidopsis thaliana unknown protein AT1G78610 mRNA, complete cds Length = 2767 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 438 aagatctttcataatgtggctaagcctggatccaagt 474 ||||||||||||||||| |||||||| ||||| |||| Sbjct: 1606 aagatctttcataatgttgctaagccaggatcaaagt 1642 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 gcatggaacatgaagaggctgatgaa 319 |||||||| ||||||||||||||||| Sbjct: 1465 gcatggaaaatgaagaggctgatgaa 1490
>ref|NM_104225.1| Arabidopsis thaliana unknown protein AT1G53470 mRNA, complete cds Length = 2646 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 437 gaagatctttcataatgtggctaagcctggatccaagtacatata 481 |||||| ||||| ||||| ||| |||||||||||| ||||||||| Sbjct: 1689 gaagatttttcagaatgttgctgagcctggatccaggtacatata 1733
>emb|AJ234472.1|HVU234472 Hordeum vulgare genomic DNA fragment; clone MWG0503 Length = 654 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 262 agctccacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaaga 321 ||||||||| ||| || ||||| ||| |||| || |||| |||||||||||| |||| || Sbjct: 139 agctccacaagctgaaccagaagaacatctctgcgtggagcatgaagaggctaatgagga 198 Query: 322 ttgttcg 328 | ||||| Sbjct: 199 tcgttcg 205 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 432 gccaagaagatctttcataatgtggctaagcctggatccaagta 475 ||||||||||| || || ||||| || || |||||||||||||| Sbjct: 310 gccaagaagattttccacaatgtcgccaaacctggatccaagta 353
>ref|NM_127254.3| Arabidopsis thaliana unknown protein AT2G17010 mRNA, complete cds Length = 2404 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 276 aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 325 ||||| || ||| |||| || |||||||||||||| || ||||||||||| Sbjct: 1234 aatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 1283
>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence Length = 215308 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 gttttgggacgctcaccacaatgga 352 ||||||||| ||||||||||||||| Sbjct: 214986 gttttgggatgctcaccacaatgga 215010
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 437 gaagatctttcataatgtggctaagcctggatccaagtacatata 481 |||||| ||||| ||||| ||| |||||||||||| ||| ||||| Sbjct: 111910 gaagatttttcagaatgttgctgagcctggatccaggtatatata 111866
>gb|AC090156.10| Homo sapiens chromosome 11, clone RP11-202M19, complete sequence Length = 45120 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 gttttgggacgctcaccacaatgga 352 ||||||||| ||||||||||||||| Sbjct: 4839 gttttgggatgctcaccacaatgga 4863
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 437 gaagatctttcataatgtggctaagcctggatccaagtacatata 481 |||||| ||||| ||||| ||| |||||||||||| ||| ||||| Sbjct: 70816 gaagatttttcagaatgttgctgagcctggatccaggtatatata 70772
>ref|NM_192797.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgtcaaaggagaagaaacag 230 |||||||||||||||||||| Sbjct: 300 tgtcaaaggagaagaaacag 281
>ref|XM_445739.1| Candida glabrata CBS138, CAGL0E01177g partial mRNA Length = 489 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgaagactacgtgcttgccg 72 |||||||||||||||||||| Sbjct: 382 cgaagactacgtgcttgccg 363
>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence Length = 189250 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ctccacaggctcaatcagaa 283 |||||||||||||||||||| Sbjct: 67457 ctccacaggctcaatcagaa 67476
>emb|AL121934.18|HSBA209A2 Human DNA sequence from clone RP11-209A2 on chromosome 6 Contains a 60S ribosomal protein L10 (RPL10) pseudogene, STSs and GSSs, complete sequence Length = 49261 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 gccaagaagatctttcataa 451 |||||||||||||||||||| Sbjct: 32197 gccaagaagatctttcataa 32178
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgaagactacgtgcttgccg 72 |||||||||||||||||||| Sbjct: 107506 cgaagactacgtgcttgccg 107487
>emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chromosome 11 Contains a zinc finger protein pseudogene, a chaperonin subunit 7 (eta) (Cct7) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 caaaggagaagaaacagcgtgaga 237 ||||| |||||||||||||||||| Sbjct: 79819 caaagtagaagaaacagcgtgaga 79842
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgtcaaaggagaagaaacag 230 |||||||||||||||||||| Sbjct: 24478301 tgtcaaaggagaagaaacag 24478282
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgtcaaaggagaagaaacag 230 |||||||||||||||||||| Sbjct: 58685 tgtcaaaggagaagaaacag 58666
>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete sequence Length = 249562 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gattgatgaagggatcacca 255 |||||||||||||||||||| Sbjct: 173857 gattgatgaagggatcacca 173838
>dbj|AK073157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012O14, full insert sequence Length = 1196 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgtcaaaggagaagaaacag 230 |||||||||||||||||||| Sbjct: 424 tgtcaaaggagaagaaacag 405 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,329,288 Number of Sequences: 3902068 Number of extensions: 3329288 Number of successful extensions: 59171 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59040 Number of HSP's gapped (non-prelim): 126 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)