ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19c24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precurs... 337 2e-92
2YGX8_YEAST (P53075) Hypothetical 66.9 kDa protein in SAP4-OST5 i... 32 1.9
3VNCS_FPV19 (P24842) Noncapsid protein NS-1 (Nonstructural protei... 30 4.3
4ATP9B_HUMAN (O43861) Probable phospholipid-transporting ATPase I... 30 7.4
5PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX 29 9.7
6ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein... 29 9.7
7GFAT_MIMIV (Q7T6X6) Probable glucosamine--fructose-6-phosphate a... 29 9.7
8O5AP2_HUMAN (Q8NGF4) Olfactory receptor 5AP2 29 9.7

>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score =  337 bits (863), Expect = 2e-92
 Identities = 156/207 (75%), Positives = 182/207 (87%), Gaps = 2/207 (0%)
 Frame = +3

Query: 3   ITATFEAPCYALNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTM 182
           ITA F APCY++NKIE+D KLPIVG+QKWVIWICSFNIPMAPGKTRSIVCSARNFFQF++
Sbjct: 292 ITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSV 351

Query: 183 PGKAWWQLVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSASKES-SADVNQQYTKLTFTPT 359
           PG AWWQ+VPRWYEHWTSNLVYDGDMIVLQGQEKVFL+ S ES   DVN+QYTKLTFTPT
Sbjct: 352 PGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPT 411

Query: 360 QADRFVLAFRAWLRKFGNSQPDWYGS-PTQDALPSTVLSKREMLDRYEQHTLKCSSCRGA 536
           QADRFVLAFR WLR+ G SQP+W+GS P+   LPSTVL+KR+MLDR++QHT  CSSC+GA
Sbjct: 412 QADRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGA 471

Query: 537 HKAFQTLQKVFMGATVVFGVTSGIPAD 617
           + +FQ L+K  +GATV +  T+G+P+D
Sbjct: 472 YNSFQILKKFLVGATVFWAATAGVPSD 498



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>YGX8_YEAST (P53075) Hypothetical 66.9 kDa protein in SAP4-OST5 intergenic|
           region
          Length = 577

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +1

Query: 130 GKLVRLSAALETFSSLP--CQERHGGSLSLDGTNT-----GPRIWSTMVI*SCFKAKRRF 288
           GKL++L   L    SL   C E + GS+S + T T      PR+W+T    +C   K + 
Sbjct: 2   GKLIKLITTLTVLVSLLQYCCEFNSGSISCERTQTLCHYTNPRVWNTYFSRNCELYKNKV 61

Query: 289 S 291
           S
Sbjct: 62  S 62



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>VNCS_FPV19 (P24842) Noncapsid protein NS-1 (Nonstructural protein NS1) (NCVP1)|
          Length = 668

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
 Frame = +3

Query: 144 IVCS--ARNFFQFTMPGKAW-WQLVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSASKESS 314
           ++C+   ++ +Q TM      W  VP W E+W    + +G  I+  G + +      E+ 
Sbjct: 534 LICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEG--IISPGCKDL------ETQ 585

Query: 315 ADVNQQYTKLTFTPTQADRFVLAFRAW------LRKFGNSQPDWYGSPTQDALPSTVLSK 476
           A  N Q      TP   D   LA   W      + +  N Q +  G   +D   S   S+
Sbjct: 586 AASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHKDVQASPTWSE 645

Query: 477 RE 482
            E
Sbjct: 646 IE 647



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>ATP9B_HUMAN (O43861) Probable phospholipid-transporting ATPase IIB (EC 3.6.3.1)|
          Length = 1095

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 559 CRVWKALCAPLQDEHLSVCCSYLSSISRFERTVEGNASWVGLP 431
           C  WK LC          CC +L +I R ++ ++    W+G P
Sbjct: 37  CDGWKFLCTS--------CCGWLINICRRKKELKARTVWLGCP 71



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>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX|
          Length = 436

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -3

Query: 209 DKLPPCLSWHGKLEKVSSAAD 147
           D+LP C+ + G++EK+ SAAD
Sbjct: 122 DRLPLCIKFVGEIEKIHSAAD 142



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>ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein 186) (hZNF2)|
          Length = 326

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 10/61 (16%)
 Frame = +2

Query: 17  RGPLLCTEQDRDRH*ITH----------CGRSEMGDMDLLLQHSHGPRENSFDCLQRSKL 166
           R P  C + D  +H  TH          C +  +   DL++QH     E  + C    KL
Sbjct: 38  RQPTCCRKSDFSKHQQTHTGEKPHECVECEKPSISKSDLMIQHKMPTEEKPYACNCCEKL 97

Query: 167 F 169
           F
Sbjct: 98  F 98



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>GFAT_MIMIV (Q7T6X6) Probable glucosamine--fructose-6-phosphate|
           aminotransferase [isomerizing] (EC 2.6.1.16)
           (Hexosephosphate aminotransferase)
           (D-fructose-6-phosphate amidotransferase) (GFAT)
          Length = 605

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 147 VCSARNFFQFTMPGKAWWQLVPRWYEHWTSNLVYD 251
           +  ++  +Q    GK    L P  Y+HWT   +YD
Sbjct: 228 IIKSQQHYQMISMGKIVMDLTPSPYKHWTQREIYD 262



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>O5AP2_HUMAN (Q8NGF4) Olfactory receptor 5AP2|
          Length = 316

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 510 LKCSSCRGAHKAFQTLQKVFMGATVVFG 593
           LK  S  G HKAF T     M  T+ FG
Sbjct: 232 LKMPSLEGRHKAFSTCASYLMAVTIFFG 259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,449,504
Number of Sequences: 219361
Number of extensions: 2250273
Number of successful extensions: 7284
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7269
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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