| Clone Name | baal19c24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U77345.1|ZMU77345 Zea mays lethal leaf-spot 1 (lls1) mRNA, partial cds Length = 1683 Score = 595 bits (300), Expect = e-167 Identities = 510/580 (87%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagatcgacacta 60 |||| ||||||||||| ||||||||||| |||||| ||||||| |||||||| ||||| | Sbjct: 669 gcattactgcaacttttgaggccccttgttatgcattgaacaaaatagagatagacacaa 728 Query: 61 aattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaacattccca 120 | ||||||||| | || || ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 729 agttacccatttttggcgaccagaaatgggtcatatggatttgctctttcaacattccaa 788 Query: 121 tggccccagggaaaactcgttcgattgtctgcagcgctcgaaactttttccagtttacca 180 ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| || | Sbjct: 789 tggccccagggaagactcgttctattgtctgtagcgctcgaaactttttccagttcacaa 848 Query: 181 tgccaggaaaggcatggtggcagcttgtccctcgatggtacgaacactggacctcgaatt 240 |||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 849 tgccaggaaaagcatggtggcagcttgttcctcgatggtatgaacattggacttcaaatt 908 Query: 241 tggtctacgatggtgatatgatcgtgcttcaaggccaagagaaggttttcctgtctgcat 300 ||||||| ||||| ||||||||||| ||||||||||| |||||| ||||||| ||||| Sbjct: 909 tggtctatgatggcgatatgatcgttcttcaaggccaggagaagattttcctagctgcaa 968 Query: 301 ccaaggagtcgtctgcagatgttaatcagcagtacacaaagctcacattcacgcccacac 360 |||||||||| ||| | ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 969 ccaaggagtcttctacggatattaatcagcagtacacaaagatcacattcacgcccacac 1028 Query: 361 aggccgaccgatttgtcttggcattccgggcatggctaaggaaattcggcaatagccagc 420 | || || |||||||| || |||||||| |||||||||||||||| ||||||||||||| Sbjct: 1029 aagctgatcgatttgttttagcattccgcacatggctaaggaaatttggcaatagccagc 1088 Query: 421 ctgactggtacggaagccctacccaagatgcattgccttctacggtcctttcaaagcgag 480 | || |||| |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 1089 cggagtggtttggaaatcctacacaagaagcattgccttccaccgtcctttcaaagcgcg 1148 Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| ||||||||||||||||||||| | |||||||||||||||| |||||| | | Sbjct: 1149 agatgctagacagatacgagcagcacacgttgaaatgctcgtcctgcaaaggagcatata 1208 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgac 580 | || ||||||| |||||||||||| |||||||| ||||| Sbjct: 1209 atgcattccagaatctgcagaaggtattcatgggagcgac 1248
>ref|XM_470215.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 559 bits (282), Expect = e-156 Identities = 513/590 (86%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagatcgacacta 60 |||||| ||||||||| | |||||||||||||||||||||||| || ||||| ||||| | Sbjct: 812 gcatcagtgcaacttttgtggccccttgctatgcactgaacaaaattgagatagacacaa 871 Query: 61 aattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaacattccca 120 | ||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 872 agttacccatttttggagatcagaaatgggtcatatggatttgctctttcaacattccaa 931 Query: 121 tggccccagggaaaactcgttcgattgtctgcagcgctcgaaactttttccagtttacca 180 ||||||||||||| |||||||| || || || || ||||| |||||||||||||||| || Sbjct: 932 tggccccagggaagactcgttctatagtttgtagtgctcggaactttttccagtttagca 991 Query: 181 tgccaggaaaggcatggtggcagcttgtccctcgatggtacgaacactggacctcgaatt 240 |||||||||| ||||||||||||||||||||||||||||| || || ||||| || |||| Sbjct: 992 tgccaggaaaagcatggtggcagcttgtccctcgatggtatgagcattggacttcaaatt 1051 Query: 241 tggtctacgatggtgatatgatcgtgcttcaaggccaagagaaggttttcctgtctgcat 300 ||||||| |||||||||||||| || || ||||| ||||||||| ||||| ||||||||| Sbjct: 1052 tggtctatgatggtgatatgatagttctgcaagggcaagagaagattttcttgtctgcat 1111 Query: 301 ccaaggagtcgtctgcagatgttaatcagcagtacacaaagctcacattcacgcccacac 360 | |||||||| ||||||||| |||||||||||||||||||| |||| || || ||||| | Sbjct: 1112 cgaaggagtcttctgcagatattaatcagcagtacacaaagatcacgtttacacccacgc 1171 Query: 361 aggccgaccgatttgtcttggcattccgggcatggctaaggaaattcggcaatagccagc 420 |||| ||||| ||||| ||||||||||||||||||||||||||||| || || ||||| | Sbjct: 1172 aggctgaccgttttgttttggcattccgggcatggctaaggaaatttggtaacagccaac 1231 Query: 421 ctgactggtacggaagccctacccaagatgcattgccttctacggtcctttcaaagcgag 480 ||||||||| |||| |||| |||||| | |||||||| || |||||||||||||| | Sbjct: 1232 ctgactggtttggaaatcctagccaagaagtgttgccttccactgtcctttcaaagcgtg 1291 Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 1292 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 1351 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 1352 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 1401
>dbj|AK120554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130M21, full insert sequence Length = 2056 Score = 559 bits (282), Expect = e-156 Identities = 513/590 (86%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagatcgacacta 60 |||||| ||||||||| | |||||||||||||||||||||||| || ||||| ||||| | Sbjct: 1132 gcatcagtgcaacttttgtggccccttgctatgcactgaacaaaattgagatagacacaa 1191 Query: 61 aattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaacattccca 120 | ||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 1192 agttacccatttttggagatcagaaatgggtcatatggatttgctctttcaacattccaa 1251 Query: 121 tggccccagggaaaactcgttcgattgtctgcagcgctcgaaactttttccagtttacca 180 ||||||||||||| |||||||| || || || || ||||| |||||||||||||||| || Sbjct: 1252 tggccccagggaagactcgttctatagtttgtagtgctcggaactttttccagtttagca 1311 Query: 181 tgccaggaaaggcatggtggcagcttgtccctcgatggtacgaacactggacctcgaatt 240 |||||||||| ||||||||||||||||||||||||||||| || || ||||| || |||| Sbjct: 1312 tgccaggaaaagcatggtggcagcttgtccctcgatggtatgagcattggacttcaaatt 1371 Query: 241 tggtctacgatggtgatatgatcgtgcttcaaggccaagagaaggttttcctgtctgcat 300 ||||||| |||||||||||||| || || ||||| ||||||||| ||||| ||||||||| Sbjct: 1372 tggtctatgatggtgatatgatagttctgcaagggcaagagaagattttcttgtctgcat 1431 Query: 301 ccaaggagtcgtctgcagatgttaatcagcagtacacaaagctcacattcacgcccacac 360 | |||||||| ||||||||| |||||||||||||||||||| |||| || || ||||| | Sbjct: 1432 cgaaggagtcttctgcagatattaatcagcagtacacaaagatcacgtttacacccacgc 1491 Query: 361 aggccgaccgatttgtcttggcattccgggcatggctaaggaaattcggcaatagccagc 420 |||| ||||| ||||| ||||||||||||||||||||||||||||| || || ||||| | Sbjct: 1492 aggctgaccgttttgttttggcattccgggcatggctaaggaaatttggtaacagccaac 1551 Query: 421 ctgactggtacggaagccctacccaagatgcattgccttctacggtcctttcaaagcgag 480 ||||||||| |||| |||| |||||| | |||||||| || |||||||||||||| | Sbjct: 1552 ctgactggtttggaaatcctagccaagaagtgttgccttccactgtcctttcaaagcgtg 1611 Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 1612 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 1671 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 1672 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 1721
>dbj|AK111974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-D01, full insert sequence Length = 2098 Score = 551 bits (278), Expect = e-154 Identities = 512/590 (86%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagatcgacacta 60 |||||| ||||||||| | |||||||||||||||||||||||| || ||||| ||||| | Sbjct: 1175 gcatcagtgcaacttttgtggccccttgctatgcactgaacaaaattgagatagacacaa 1234 Query: 61 aattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaacattccca 120 | ||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 1235 agttacccatttttggagatcagaaatgggtcatatggatttgctctttcaacattccaa 1294 Query: 121 tggccccagggaaaactcgttcgattgtctgcagcgctcgaaactttttccagtttacca 180 ||||||||||||| |||||||| || || || || ||||| ||||||||||||||| || Sbjct: 1295 tggccccagggaagactcgttctatagtttgtagtgctcgggactttttccagtttagca 1354 Query: 181 tgccaggaaaggcatggtggcagcttgtccctcgatggtacgaacactggacctcgaatt 240 |||||||||| ||||||||||||||||||||||||||||| || || ||||| || |||| Sbjct: 1355 tgccaggaaaagcatggtggcagcttgtccctcgatggtatgagcattggacttcaaatt 1414 Query: 241 tggtctacgatggtgatatgatcgtgcttcaaggccaagagaaggttttcctgtctgcat 300 ||||||| |||||||||||||| || || ||||| ||||||||| ||||| ||||||||| Sbjct: 1415 tggtctatgatggtgatatgatagttctgcaagggcaagagaagattttcttgtctgcat 1474 Query: 301 ccaaggagtcgtctgcagatgttaatcagcagtacacaaagctcacattcacgcccacac 360 | |||||||| ||||||||| |||||||||||||||||||| |||| || || ||||| | Sbjct: 1475 cgaaggagtcttctgcagatattaatcagcagtacacaaagatcacgtttacacccacgc 1534 Query: 361 aggccgaccgatttgtcttggcattccgggcatggctaaggaaattcggcaatagccagc 420 |||| ||||| ||||| ||||||||||||||||||||||||||||| || || ||||| | Sbjct: 1535 aggctgaccgttttgttttggcattccgggcatggctaaggaaatttggtaacagccaac 1594 Query: 421 ctgactggtacggaagccctacccaagatgcattgccttctacggtcctttcaaagcgag 480 ||||||||| |||| |||| |||||| | |||||||| || |||||||||||||| | Sbjct: 1595 ctgactggtttggaaatcctagccaagaagtgttgccttccactgtcctttcaaagcgtg 1654 Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 1655 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 1714 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 1715 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 1764
>gb|AY110853.1| Zea mays CL10_1 mRNA sequence Length = 2131 Score = 551 bits (278), Expect = e-154 Identities = 502/580 (86%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagatcgacacta 60 |||| ||||||||||| ||||||||||| |||||| ||||||| |||||||| ||||| | Sbjct: 1116 gcattactgcaacttttgaggccccttgttatgcattgaacaaaatagagatagacacaa 1175 Query: 61 aattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaacattccca 120 | ||||||| || || ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 1176 agttacccannnnnggcgaccagaaatgggtcatatggatttgctctttcaacattccaa 1235 Query: 121 tggccccagggaaaactcgttcgattgtctgcagcgctcgaaactttttccagtttacca 180 ||||||||||||| |||||||| |||||||| |||||||||||| |||||| || | Sbjct: 1236 tggccccagggaagactcgttctattgtctgtagcgctcgaaacnnnnnccagttcacaa 1295 Query: 181 tgccaggaaaggcatggtggcagcttgtccctcgatggtacgaacactggacctcgaatt 240 |||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| || |||| Sbjct: 1296 tgccaggaaaagcatggtggcagcttgttcctcgatggtatgaacattggacttcaaatt 1355 Query: 241 tggtctacgatggtgatatgatcgtgcttcaaggccaagagaaggttttcctgtctgcat 300 ||||||| ||||| ||||||||||| ||||||||||| |||||| ||||||| ||||| Sbjct: 1356 tggtctatgatggcgatatgatcgttcttcaaggccaggagaagattttcctagctgcaa 1415 Query: 301 ccaaggagtcgtctgcagatgttaatcagcagtacacaaagctcacattcacgcccacac 360 |||||||||| ||| | ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 1416 ccaaggagtcttctacggatattaatcagcagtacacaaagatcacattcacgcccacac 1475 Query: 361 aggccgaccgatttgtcttggcattccgggcatggctaaggaaattcggcaatagccagc 420 | || || |||||||| || |||||||| |||||||||||||||| ||||||||||||| Sbjct: 1476 aagctgatcgatttgttttagcattccgcacatggctaaggaaatttggcaatagccagc 1535 Query: 421 ctgactggtacggaagccctacccaagatgcattgccttctacggtcctttcaaagcgag 480 | || |||| |||| ||||| ||||| ||||||||||| || |||||||||||||| | Sbjct: 1536 cggagtggtttggaaatcctacacaagaagcattgccttccaccgtcctttcaaagcgcg 1595 Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| ||||||||||||||||||||| | |||||||||||||||| |||||| | | Sbjct: 1596 agatgctagacagatacgagcagcacacgttgaaatgctcgtcctgcaaaggagcatata 1655 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgac 580 | || ||||||| |||||||||||| |||||||| ||||| Sbjct: 1656 atgcattccagaatctgcagaaggtattcatgggagcgac 1695
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 260 bits (131), Expect = 5e-66 Identities = 242/279 (86%) Strand = Plus / Plus Query: 200 gcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgatat 259 ||||||||||||||||||||| || || ||||| || ||||||||||| ||||||||||| Sbjct: 2560714 gcagcttgtccctcgatggtatgagcattggacttcaaatttggtctatgatggtgatat 2560773 Query: 260 gatcgtgcttcaaggccaagagaaggttttcctgtctgcatccaaggagtcgtctgcaga 319 ||| || || ||||| ||||||||| ||||| |||||||||| |||||||| |||||||| Sbjct: 2560774 gatagttctgcaagggcaagagaagattttcttgtctgcatcgaaggagtcttctgcaga 2560833 Query: 320 tgttaatcagcagtacacaaagctcacattcacgcccacacaggccgaccgatttgtctt 379 | |||||||||||||||||||| |||| || || ||||| ||||| ||||| ||||| || Sbjct: 2560834 tattaatcagcagtacacaaagatcacgtttacacccacgcaggctgaccgttttgtttt 2560893 Query: 380 ggcattccgggcatggctaaggaaattcggcaatagccagcctgactggtacggaagccc 439 ||||||||||||||||||||||||||| || || ||||| |||||||||| |||| || Sbjct: 2560894 ggcattccgggcatggctaaggaaatttggtaacagccaacctgactggtttggaaatcc 2560953 Query: 440 tacccaagatgcattgccttctacggtcctttcaaagcg 478 || |||||| | |||||||| || |||||||||||||| Sbjct: 2560954 tagccaagaagtgttgccttccactgtcctttcaaagcg 2560992 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 48 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 107 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 2560361 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 2560420 Query: 108 ttcaacattcccatggccccagggaaaactcgttcgattgtctgcagcgctcgaaacttt 167 ||||||||||| |||||||||||||| |||||||| || || || || ||||| |||||| Sbjct: 2560421 ttcaacattccaatggccccagggaagactcgttctatagtttgtagtgctcggaacttt 2560480 Query: 168 ttccagtttaccatgccaggaaaggcatggtggcag 203 |||||||||| |||||||||||| |||||||||||| Sbjct: 2560481 ttccagtttagcatgccaggaaaagcatggtggcag 2560516 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 2561638 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 2561697 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 2561698 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 2561747 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaag 44 |||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 2560174 gcatcagtgcaacttttgtggccccttgctatgcactgaacaag 2560217
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 260 bits (131), Expect = 5e-66 Identities = 242/279 (86%) Strand = Plus / Minus Query: 200 gcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgatat 259 ||||||||||||||||||||| || || ||||| || ||||||||||| ||||||||||| Sbjct: 109380 gcagcttgtccctcgatggtatgagcattggacttcaaatttggtctatgatggtgatat 109321 Query: 260 gatcgtgcttcaaggccaagagaaggttttcctgtctgcatccaaggagtcgtctgcaga 319 ||| || || ||||| ||||||||| ||||| |||||||||| |||||||| |||||||| Sbjct: 109320 gatagttctgcaagggcaagagaagattttcttgtctgcatcgaaggagtcttctgcaga 109261 Query: 320 tgttaatcagcagtacacaaagctcacattcacgcccacacaggccgaccgatttgtctt 379 | |||||||||||||||||||| |||| || || ||||| ||||| ||||| ||||| || Sbjct: 109260 tattaatcagcagtacacaaagatcacgtttacacccacgcaggctgaccgttttgtttt 109201 Query: 380 ggcattccgggcatggctaaggaaattcggcaatagccagcctgactggtacggaagccc 439 ||||||||||||||||||||||||||| || || ||||| |||||||||| |||| || Sbjct: 109200 ggcattccgggcatggctaaggaaatttggtaacagccaacctgactggtttggaaatcc 109141 Query: 440 tacccaagatgcattgccttctacggtcctttcaaagcg 478 || |||||| | |||||||| || |||||||||||||| Sbjct: 109140 tagccaagaagtgttgccttccactgtcctttcaaagcg 109102 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 48 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 107 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 109733 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 109674 Query: 108 ttcaacattcccatggccccagggaaaactcgttcgattgtctgcagcgctcgaaacttt 167 ||||||||||| |||||||||||||| |||||||| || || || || ||||| |||||| Sbjct: 109673 ttcaacattccaatggccccagggaagactcgttctatagtttgtagtgctcggaacttt 109614 Query: 168 ttccagtttaccatgccaggaaaggcatggtggcag 203 |||||||||| |||||||||||| |||||||||||| Sbjct: 109613 ttccagtttagcatgccaggaaaagcatggtggcag 109578 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 108456 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 108397 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 108396 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 108347 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaag 44 |||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 109920 gcatcagtgcaacttttgtggccccttgctatgcactgaacaag 109877
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 260 bits (131), Expect = 5e-66 Identities = 242/279 (86%) Strand = Plus / Plus Query: 200 gcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgatat 259 ||||||||||||||||||||| || || ||||| || ||||||||||| ||||||||||| Sbjct: 2560824 gcagcttgtccctcgatggtatgagcattggacttcaaatttggtctatgatggtgatat 2560883 Query: 260 gatcgtgcttcaaggccaagagaaggttttcctgtctgcatccaaggagtcgtctgcaga 319 ||| || || ||||| ||||||||| ||||| |||||||||| |||||||| |||||||| Sbjct: 2560884 gatagttctgcaagggcaagagaagattttcttgtctgcatcgaaggagtcttctgcaga 2560943 Query: 320 tgttaatcagcagtacacaaagctcacattcacgcccacacaggccgaccgatttgtctt 379 | |||||||||||||||||||| |||| || || ||||| ||||| ||||| ||||| || Sbjct: 2560944 tattaatcagcagtacacaaagatcacgtttacacccacgcaggctgaccgttttgtttt 2561003 Query: 380 ggcattccgggcatggctaaggaaattcggcaatagccagcctgactggtacggaagccc 439 ||||||||||||||||||||||||||| || || ||||| |||||||||| |||| || Sbjct: 2561004 ggcattccgggcatggctaaggaaatttggtaacagccaacctgactggtttggaaatcc 2561063 Query: 440 tacccaagatgcattgccttctacggtcctttcaaagcg 478 || |||||| | |||||||| || |||||||||||||| Sbjct: 2561064 tagccaagaagtgttgccttccactgtcctttcaaagcg 2561102 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 48 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 107 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 2560471 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 2560530 Query: 108 ttcaacattcccatggccccagggaaaactcgttcgattgtctgcagcgctcgaaacttt 167 ||||||||||| |||||||||||||| |||||||| || || || || ||||| |||||| Sbjct: 2560531 ttcaacattccaatggccccagggaagactcgttctatagtttgtagtgctcggaacttt 2560590 Query: 168 ttccagtttaccatgccaggaaaggcatggtggcag 203 |||||||||| |||||||||||| |||||||||||| Sbjct: 2560591 ttccagtttagcatgccaggaaaagcatggtggcag 2560626 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| || ||||| ||||||||||| || |||||||| || |||| ||| || ||| Sbjct: 2561748 agatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcataca 2561807 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgacggtggtgttc 590 | ||||||||||||||||| ||||| |||||||| ||||| |||| |||| Sbjct: 2561808 acgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttc 2561857 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaag 44 |||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 2560284 gcatcagtgcaacttttgtggccccttgctatgcactgaacaag 2560327
>gb|U77346.1|ZMU77346 Zea mays lethal leaf-spot 1 (lls-1) gene, partial cds; and unknown gene Length = 7129 Score = 248 bits (125), Expect = 2e-62 Identities = 239/277 (86%) Strand = Plus / Plus Query: 202 agcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgatatga 261 ||||||| ||||||||||| ||||| ||||| || ||||||||||| ||||| ||||||| Sbjct: 6117 agcttgttcctcgatggtatgaacattggacttcaaatttggtctatgatggcgatatga 6176 Query: 262 tcgtgcttcaaggccaagagaaggttttcctgtctgcatccaaggagtcgtctgcagatg 321 |||| ||||||||||| |||||| ||||||| ||||| |||||||||| ||| | ||| Sbjct: 6177 tcgttcttcaaggccaggagaagattttcctagctgcaaccaaggagtcttctacggata 6236 Query: 322 ttaatcagcagtacacaaagctcacattcacgcccacacaggccgaccgatttgtcttgg 381 |||||||||||||||||||| ||||||||||||||||||| || || |||||||| || | Sbjct: 6237 ttaatcagcagtacacaaagatcacattcacgcccacacaagctgatcgatttgttttag 6296 Query: 382 cattccgggcatggctaaggaaattcggcaatagccagcctgactggtacggaagcccta 441 ||| ||| | |||||||||||||| |||||||||||||| || |||| |||| |||| Sbjct: 6297 catgccgcacgtggctaaggaaatttggcaatagccagccggagtggtttggaaatccta 6356 Query: 442 cccaagatgcattgccttctacggtcctttcaaagcg 478 | ||||| ||||||||||| || |||||||||||||| Sbjct: 6357 cacaagaagcattgccttccaccgtcctttcaaagcg 6393 Score = 188 bits (95), Expect = 1e-44 Identities = 143/159 (89%) Strand = Plus / Plus Query: 45 atagagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgc 104 |||||||| ||||| || ||||||||| | || || ||||||||||| |||||||||||| Sbjct: 5730 atagagatagacacaaagttacccatttttggcgaccagaaatgggtcatatggatttgc 5789 Query: 105 tccttcaacattcccatggccccagggaaaactcgttcgattgtctgcagcgctcgaaac 164 || ||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 5790 tctttcaacattccaatggccccagggaagactcgttctattgtctgtagcgctcgaaac 5849 Query: 165 tttttccagtttaccatgccaggaaaggcatggtggcag 203 ||||||||||| || ||||||||||| |||||||||||| Sbjct: 5850 tttttccagttcacaatgccaggaaaagcatggtggcag 5888 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 481 agatgctggacagatacgagcagcacacgctcaaatgctcgtcctgcagaggagcgcaca 540 ||||||| |||||||||||||||| | || | ||||||||||| |||| |||||| | | Sbjct: 6921 agatgctagacagatacgagcagctctcgttgaaatgctcgtcttgcaaaggagcatata 6980 Query: 541 aggccttccagactctgcagaaggtgttcatgggggcgac 580 | || ||||||| |||||||||||| |||||||| ||||| Sbjct: 6981 atgctttccagaatctgcagaaggtattcatgggagcgac 7020 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1 gcatcactgcaactttcgaggccccttgctatgcactgaacaag 44 |||| ||||||||||| ||||||||||| |||||| | |||||| Sbjct: 5574 gcattactgcaacttttgaggccccttgttatgcattaaacaag 5617
>ref|NM_114357.4| Arabidopsis thaliana ACD1 (ACCELERATED CELL DEATH 1); oxidoreductase AT3G44880 (ACD1) mRNA, complete cds Length = 1984 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 1213 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 1272 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 1273 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 1332 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 1333 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 1392 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 1393 tgatcgtacttcaaggacaagagaaagtattcct 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 1467 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 1513
>gb|AY093092.1| Arabidopsis thaliana lethal leaf-spot 1 homolog Lls1 (At3g44880) mRNA, complete cds Length = 1737 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 998 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 1057 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 1058 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 1117 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 1118 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 1177 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 1178 tgatcgtacttcaaggacaagagaaagtattcct 1211 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 1252 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 1298
>gb|AY344061.1| Arabidopsis thaliana accelerated cell death 1 (ACD1) mRNA, complete cds Length = 1614 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 950 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 1009 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 1010 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 1069 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 1070 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 1129 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 1130 tgatcgtacttcaaggacaagagaaagtattcct 1163 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 1204 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 1250
>emb|BX825426.1|CNS0A525 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 262 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 321 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 322 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 381 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 382 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 441 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 442 tgatcgtacttcaaggacaagagaaagtattcct 475 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 516 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 562
>emb|BX824848.1|CNS0A4QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZB11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1777 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 1064 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 1123 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 1124 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 1183 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 1184 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 1243 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 1244 tgatcgtacttcaaggacaagagaaagtattcct 1277 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 1318 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 1364
>gb|U77347.1|ATU77347 Arabidopsis thaliana lethal leaf-spot 1 homolog (Lls1) mRNA, partial cds Length = 1977 Score = 83.8 bits (42), Expect = 6e-13 Identities = 171/214 (79%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 1215 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 1274 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtttaccatgccaggaaaggcatggt 198 |||| || || |||||||| || ||||| || ||||| | | |||||| || |||| Sbjct: 1275 gttccatcgtttgcagcgcccgtaacttctttcagttctctgtaccaggaccagcttggt 1334 Query: 199 ggcagcttgtccctcgatggtacgaacactggacctcgaatttggtctacgatggtgata 258 ||||| |||| || ||||||| ||||||||||| ||||| || ||||| || || || | Sbjct: 1335 ggcaggttgtaccaagatggtatgaacactggacttcgaacttagtctatgacggagaca 1394 Query: 259 tgatcgtgcttcaaggccaagagaaggttttcct 292 ||||||| |||||||| |||||||| || ||||| Sbjct: 1395 tgatcgtacttcaaggacaagagaaagtattcct 1428 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 1469 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 1515
>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10 Length = 49890 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 214 gatggtacgaacactggacctcgaatttggtctacgatggtgatatgatcgtgcttcaag 273 ||||||| ||||||||||| ||||| || ||||| || || || |||||||| ||||||| Sbjct: 26187 gatggtatgaacactggacttcgaacttagtctatgacggagacatgatcgtacttcaag 26246 Query: 274 gccaagagaaggttttcct 292 | |||||||| || ||||| Sbjct: 26247 gacaagagaaagtattcct 26265 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgt 376 ||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 26306 cagtacacaaagctcacattcactccaacccaggcagaccgttttgt 26352 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 79 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactc 138 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 25980 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccaggaaagaccc 26039 Query: 139 gttcgattgtctgcagcgctcgaaactttttccagtt 175 |||| || || |||||||| || ||||| || ||||| Sbjct: 26040 gttccatcgtttgcagcgcccgtaacttctttcagtt 26076
>gb|AF321984.1|AF321984 Lycopersicon esculentum lethal leaf spot 1-like protein mRNA, complete cds Length = 1717 Score = 60.0 bits (30), Expect = 9e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 45 atagagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgc 104 |||||||||||||| || | || || ||||| |||||||| ||||||||||||||||| Sbjct: 977 atagagatcgacacaaagcttccaatcgtgggtgatcagaagtgggtgatatggatttgt 1036 Query: 105 tccttcaacattcccatggccccagggaaaactcgttcgattgtctgcagcgctcgaaac 164 ||||| || | || ||||| ||||| || || | || ||||| || || ||||||||| Sbjct: 1037 tcctttaatgtacctatggcaccaggaaagaccaggtcaattgtttgtagtgctcgaaac 1096 Query: 165 tttttccagtttac 178 || | ||||||||| Sbjct: 1097 ttctcccagtttac 1110
>gb|AC124682.4| Mus musculus BAC clone RP24-336O24 from chromosome 6, complete sequence Length = 127717 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 179 catgccaggaaaggcatggtggcag 203 ||||||||||||||||||||||||| Sbjct: 38074 catgccaggaaaggcatggtggcag 38098
>gb|AC160998.4| Mus musculus BAC clone RP23-78N12 from chromosome 6, complete sequence Length = 279848 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 179 catgccaggaaaggcatggtggcag 203 ||||||||||||||||||||||||| Sbjct: 263303 catgccaggaaaggcatggtggcag 263327
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 330 cagtacacaaagctcacattcacgcccacacaggccgaccgatttgtcttggcatt 385 |||||||||| ||||| ||||| || ||||||||||| || ||||| |||||||| Sbjct: 26068 cagtacacaagcctcaccttcacaccaacacaggccgatcgttttgtgttggcatt 26123 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 81 cagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaactcgt 140 ||||||||||| |||||||| || |||||||| | |||||||| || || || ||||| Sbjct: 25500 cagaaatgggtaatatggatatgttccttcaatgtccccatggcacctggtaagactcgc 25559 Query: 141 tcgattgtctgcagcgctcgaaactttttccag 173 || || || ||||| || ||||| || |||||| Sbjct: 25560 tccatcgtttgcagtgcccgaaatttcttccag 25592
>gb|AC115012.9| Mus musculus chromosome 3, clone RP24-192J5, complete sequence Length = 150447 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 ttttcctgtctgcatccaagga 307 |||||||||||||||||||||| Sbjct: 73366 ttttcctgtctgcatccaagga 73345
>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724 Length = 820587 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 agatagagatcgacactaaatt 64 |||||||||||||||||||||| Sbjct: 397766 agatagagatcgacactaaatt 397787
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 catgccaggaaaggcatggtggcag 203 |||| |||||||||||||||||||| Sbjct: 27181 catggcaggaaaggcatggtggcag 27205
>gb|AC102220.8| Mus musculus chromosome 7, clone RP24-117E17, complete sequence Length = 182996 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 catgccaggaaaggcatggtggcag 203 |||| |||||||||||||||||||| Sbjct: 5321 catggcaggaaaggcatggtggcag 5297
>gb|AC102299.11| Mus musculus chromosome 7, clone RP24-397O2, complete sequence Length = 167677 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 catgccaggaaaggcatggtggcag 203 |||| |||||||||||||||||||| Sbjct: 108569 catggcaggaaaggcatggtggcag 108545
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 catgccaggaaaggcatggtggcag 203 |||| |||||||||||||||||||| Sbjct: 107481 catggcaggaaaggcatggtggcag 107457
>gb|AC132314.3| Mus musculus BAC clone RP24-233C4 from chromosome 18, complete sequence Length = 156356 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 171 cagtttaccatgccaggaaaggcatggtg 199 |||||||||||| |||| ||||||||||| Sbjct: 60833 cagtttaccatggcagggaaggcatggtg 60861
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence Length = 109162 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 gttttcctgtctgcatccaag 305 ||||||||||||||||||||| Sbjct: 17450 gttttcctgtctgcatccaag 17430
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 tcaacattcccatggccccag 129 ||||||||||||||||||||| Sbjct: 38045 tcaacattcccatggccccag 38065
>gb|AC044792.6| Homo sapiens chromosome 19 clone CTC-258N23, complete sequence Length = 201939 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 agaaggttttcctgtctgcat 300 ||||||||||||||||||||| Sbjct: 158615 agaaggttttcctgtctgcat 158595
>gb|AC154744.2| Mus musculus BAC clone RP24-394N17 from chromosome 12, complete sequence Length = 165140 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 caggaaaggcatggtggcagc 204 ||||||||||||||||||||| Sbjct: 49640 caggaaaggcatggtggcagc 49620
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 catgccaggaaaggcatggtggcag 203 |||| |||||||||||||||||||| Sbjct: 165849 catggcaggaaaggcatggtggcag 165873
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 aggaaaggcatggtggcagcttgtc 209 |||||||| |||||||||||||||| Sbjct: 11783 aggaaaggaatggtggcagcttgtc 11759
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 caggaaaggcatggtggcagc 204 ||||||||||||||||||||| Sbjct: 146337 caggaaaggcatggtggcagc 146317
>gb|AC116052.6| Mus musculus BAC clone RP23-291E18 from 6, complete sequence Length = 195163 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 aggaaaggcatggtggcagcttgtc 209 |||||||| |||||||||||||||| Sbjct: 183915 aggaaaggaatggtggcagcttgtc 183891
>gb|DQ273270.1| Allium cepa clone 1G-12-89, complete sequence Length = 107859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ggatttgctccttcaacattc 117 ||||||||||||||||||||| Sbjct: 40887 ggatttgctccttcaacattc 40867
>gb|AC160134.2| Mus musculus BAC clone RP23-139G11 from chromosome 9, complete sequence Length = 176272 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 taccatgccaggaaaggcatggtggcag 203 ||||||| ||||||||||||| |||||| Sbjct: 119075 taccatggcaggaaaggcatgctggcag 119048
>gb|AC131675.4| Mus musculus BAC clone RP23-328L1 from chromosome 18, complete sequence Length = 191085 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccaggaaaggcatggtggca 202 |||||||||||||||||||| Sbjct: 60163 ccaggaaaggcatggtggca 60182
>emb|Y12328.1|CADNAPOLI C.aurantiacus polA gene for DNA polymerase I Length = 3952 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 gacggtggtgttcggcgtga 597 |||||||||||||||||||| Sbjct: 2579 gacggtggtgttcggcgtga 2598
>dbj|AK141434.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530014K03 product:unclassifiable, full insert sequence Length = 1614 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 caggaaaggcatggtggcag 203 |||||||||||||||||||| Sbjct: 924 caggaaaggcatggtggcag 905
>gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, complete sequence Length = 174380 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 caggaaaggcatggtggcag 203 |||||||||||||||||||| Sbjct: 110730 caggaaaggcatggtggcag 110711
>gb|AY257179.1| Vigna unguiculata lethal leaf spot 1-like protein mRNA, complete cds Length = 1849 Score = 40.1 bits (20), Expect = 8.4 Identities = 101/128 (78%) Strand = Plus / Plus Query: 156 gctcgaaactttttccagtttaccatgccaggaaaggcatggtggcagcttgtccctcga 215 ||||||||||| |||||||| || ||||||| || |||||||| | || ||| || Sbjct: 1119 gctcgaaacttcttccagttcacagtgccagggcctgcctggtggcaagtagttcctaga 1178 Query: 216 tggtacgaacactggacctcgaatttggtctacgatggtgatatgatcgtgcttcaaggc 275 ||||| || || ||||| ||||| ||| || ||||| || ||||| || ||||||||| Sbjct: 1179 tggtatgagcattggacttcgaacaaggtatatgatggagacatgatagtccttcaaggc 1238 Query: 276 caagagaa 283 |||||||| Sbjct: 1239 caagagaa 1246
>gb|AC016681.2|AC016681 Homo sapiens BAC clone RP11-62H15 from Y, complete sequence Length = 68726 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 taatcagcagtacacaaagc 342 |||||||||||||||||||| Sbjct: 46719 taatcagcagtacacaaagc 46738
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 aattcggcaatagccagcct 422 |||||||||||||||||||| Sbjct: 1228962 aattcggcaatagccagcct 1228943
>emb|BX470225.8| Mouse DNA sequence from clone RP24-83L7 on chromosome 4, complete sequence Length = 50842 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caggaaaggcatggtggcag 203 |||||||||||||||||||| Sbjct: 27173 caggaaaggcatggtggcag 27192
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 ggggcgacggtggtgttcggcgtg 596 |||||||||||| ||||||||||| Sbjct: 1876897 ggggcgacggtgctgttcggcgtg 1876874
>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence Length = 165291 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caggaaaggcatggtggcag 203 |||||||||||||||||||| Sbjct: 80361 caggaaaggcatggtggcag 80380
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete sequence Length = 243954 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caggaaaggcatggtggcag 203 |||||||||||||||||||| Sbjct: 210499 caggaaaggcatggtggcag 210518
>emb|AL590492.7| Human DNA sequence from clone RP11-88H5 on chromosome X, complete sequence Length = 129357 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 taatcagcagtacacaaagc 342 |||||||||||||||||||| Sbjct: 87932 taatcagcagtacacaaagc 87951
>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete sequence Length = 91481 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 catgccaggaaaggcatggtggca 202 |||| ||||||||||||||||||| Sbjct: 66651 catggcaggaaaggcatggtggca 66674 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,753,014 Number of Sequences: 3902068 Number of extensions: 4753014 Number of successful extensions: 83198 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83031 Number of HSP's gapped (non-prelim): 166 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)