| Clone Name | baal19c21 |
|---|---|
| Clone Library Name | barley_pub |
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 380 bits (975), Expect = e-105 Identities = 185/196 (94%), Positives = 192/196 (97%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTL+ELGRETLSFWV+AFSEDTAKRLENFG Sbjct: 828 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLDELGRETLSFWVKAFSEDTAKRLENFG 887 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 FIQSRPGGE+HANNPEMSKLLHKAIREK DNAYT+YQQHLASRPVNVLRDL+ELKS+R P Sbjct: 888 FIQSRPGGEYHANNPEMSKLLHKAIREKRDNAYTVYQQHLASRPVNVLRDLLELKSDRAP 947 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 IPIGKVE ATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW+PL Sbjct: 948 IPIGKVESATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWNPL 1007 Query: 544 TDVVDGYSATLPHLKG 591 TDVVDGYS TLPHLKG Sbjct: 1008 TDVVDGYSPTLPHLKG 1023
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 353 bits (907), Expect = 2e-97 Identities = 168/196 (85%), Positives = 183/196 (93%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 YCGAQIFEIYGLGQ+VVDLAF GSVSKI GLT +EL RETLSFWV+AFSEDT KRLENFG Sbjct: 862 YCGAQIFEIYGLGQDVVDLAFTGSVSKISGLTFDELARETLSFWVKAFSEDTTKRLENFG 921 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 FIQ RPGGE+H+NNPEMSKLLHKA+REKS+ AY +YQQHL++RPVNVLRDL+E KS+R P Sbjct: 922 FIQFRPGGEYHSNNPEMSKLLHKAVREKSETAYAVYQQHLSNRPVNVLRDLLEFKSDRAP 981 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 IP+GKVEPA +IV+RFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW PL Sbjct: 982 IPVGKVEPAVAIVQRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKPL 1041 Query: 544 TDVVDGYSATLPHLKG 591 TDVVDGYS TLPHLKG Sbjct: 1042 TDVVDGYSPTLPHLKG 1057
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 353 bits (905), Expect = 3e-97 Identities = 168/196 (85%), Positives = 186/196 (94%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 YCGAQIFEIYGLG++VVD+AF GSVSK+GGLTL+EL RETLSFWV+AFSEDTAKRLENFG Sbjct: 731 YCGAQIFEIYGLGKDVVDIAFQGSVSKMGGLTLDELARETLSFWVKAFSEDTAKRLENFG 790 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 FIQ RPGGE+H NNPEMSKLLHKA+R KS++AY +YQQHLA+RPV+VLRDL+E KS+R P Sbjct: 791 FIQFRPGGEYHVNNPEMSKLLHKAVRNKSESAYAVYQQHLANRPVSVLRDLLEFKSDRAP 850 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 I +GKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNR+GGKSNSGEGGEDPIRW PL Sbjct: 851 ISVGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWRPL 910 Query: 544 TDVVDGYSATLPHLKG 591 TDVVDGYS+TLPHLKG Sbjct: 911 TDVVDGYSSTLPHLKG 926
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 348 bits (892), Expect = 9e-96 Identities = 164/196 (83%), Positives = 181/196 (92%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 YCGAQIFEIYGLG EVV+ +F GS S+IGGLTL+EL RETL+FWVRAFSEDTAKRLENFG Sbjct: 838 YCGAQIFEIYGLGNEVVEFSFRGSASQIGGLTLDELARETLTFWVRAFSEDTAKRLENFG 897 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 FIQ RPGGE+H NNPEMSKLLHKA+REKS+ AY +YQQHLA+RP+ V RDL+E KS+R P Sbjct: 898 FIQFRPGGEYHGNNPEMSKLLHKAVREKSETAYAVYQQHLANRPITVFRDLLEFKSDRNP 957 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 IP+GKVEPA+SIVERFCTGGMSLGAISRETHE IAIAMNR+GGKSNSGEGGEDPIRW PL Sbjct: 958 IPVGKVEPASSIVERFCTGGMSLGAISRETHETIAIAMNRLGGKSNSGEGGEDPIRWKPL 1017 Query: 544 TDVVDGYSATLPHLKG 591 TDVVDGYS+TLPHLKG Sbjct: 1018 TDVVDGYSSTLPHLKG 1033
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 242 bits (617), Expect = 7e-64 Identities = 121/197 (61%), Positives = 151/197 (76%), Gaps = 1/197 (0%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y GAQIFEI GLG EVV+ AF G+ S+IGGL++ ELG+ET++ +AFS+ K+L N+G Sbjct: 760 YHGAQIFEILGLGSEVVNFAFKGTTSQIGGLSMEELGQETVNIHSKAFSQVKTKKLANYG 819 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 F+Q RPGGE+H NNPEMSK LH+A+R + Y YQ+ L +RP LRDL++LKS + P Sbjct: 820 FVQYRPGGEYHINNPEMSKALHQAVRGYNPEYYNSYQRLLQNRPPTALRDLLKLKSNKQP 879 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 I I KVE +I+ +FCTGGMSLGA+SRETHE +AIAMNRIGGKSNSGEGGEDP+R+ L Sbjct: 880 IAIDKVESMENILHKFCTGGMSLGALSRETHETLAIAMNRIGGKSNSGEGGEDPVRFKVL 939 Query: 544 TDVVD-GYSATLPHLKG 591 DV + G S LPHLKG Sbjct: 940 NDVNESGNSDLLPHLKG 956
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 231 bits (590), Expect = 9e-61 Identities = 117/197 (59%), Positives = 145/197 (73%), Gaps = 1/197 (0%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y GAQIFEI GLG+EVVDLAF G+VS+IGGL+ +L ET+ FS+ K+L+N G Sbjct: 767 YIGAQIFEILGLGKEVVDLAFEGTVSRIGGLSFADLAMETIDLCSAGFSKLNKKKLDNHG 826 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 F+Q RPGGE+H NNPEMSK LHKA+RE + Y Y+Q LA+RP +RDL+E Sbjct: 827 FVQYRPGGEYHLNNPEMSKALHKAVRENNYTLYEAYKQLLANRPPTNIRDLLEFNFRSCS 886 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 +P+ KVE I +RFCTGGMSLGA+SRE HE ++IAMNRIGGKSNSGEGGED +R++ L Sbjct: 887 VPLEKVENIFEITKRFCTGGMSLGALSREAHETLSIAMNRIGGKSNSGEGGEDSLRFTVL 946 Query: 544 TDVVD-GYSATLPHLKG 591 TDV + G S + PHLKG Sbjct: 947 TDVDETGNSPSFPHLKG 963
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 223 bits (567), Expect = 4e-58 Identities = 113/197 (57%), Positives = 141/197 (71%), Gaps = 1/197 (0%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y GAQIFEI GLGQ+VVDLAF G+VS++ G+TLNEL ++L + AF + K+L N G Sbjct: 756 YHGAQIFEILGLGQDVVDLAFSGTVSRLNGMTLNELYEDSLKSYNLAFITEIPKKLPNLG 815 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 ++Q RP E+H NNPEMSK LHKA+R + Y+ Y+ L R LRDL+ELK++R P Sbjct: 816 YVQYRPSAEYHVNNPEMSKTLHKAVRNNDNILYSKYKSLLNDRRPTNLRDLLELKTDRQP 875 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPL 543 I I +VE S++ RFCTGGMSLGA+SRETHE +AI MNRIGGKSNSGEGGED R+ + Sbjct: 876 ISIDQVEDVNSVLMRFCTGGMSLGALSRETHETLAIRMNRIGGKSNSGEGGEDSTRFKSI 935 Query: 544 TDV-VDGYSATLPHLKG 591 D+ G S T HLKG Sbjct: 936 QDLDTSGVSRTFSHLKG 952
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 213 bits (542), Expect = 3e-55 Identities = 111/207 (53%), Positives = 145/207 (70%), Gaps = 11/207 (5%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y GAQIFE GLG E+V+ AF G+ S++GGLT+ ++ E + F AF E AK+LENFG Sbjct: 762 YHGAQIFEAIGLGAELVEYAFAGTTSRVGGLTIADVAGEVMVFHGMAFPE-MAKKLENFG 820 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIRE----------KSDNAYTIYQQHLASRPVNVLRD 333 F+ RPGGE+H N+PEMSK LHKA+ ++ + Y +Y+Q+L RPV LRD Sbjct: 821 FVNYRPGGEYHMNSPEMSKSLHKAVAAYKVGGNGNNGEAYDHYELYRQYLKDRPVTALRD 880 Query: 334 LVELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEG 513 L++ +++ I + +VE SIV+RFCTGGMSLGA+SRE HE +AIAMNR+G KSNSGEG Sbjct: 881 LLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEG 940 Query: 514 GEDPIRWSPLTDV-VDGYSATLPHLKG 591 GED +R+ L DV +G S TLPHL G Sbjct: 941 GEDVVRYLTLDDVDSEGNSPTLPHLHG 967
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 150 bits (378), Expect = 3e-36 Identities = 80/179 (44%), Positives = 107/179 (59%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y GAQIFE G+ ++V+D F G+ S++GG+ L + E A+ +D +K LE Sbjct: 729 YRGAQIFEAVGISRDVIDRYFSGTASQLGGIDLQTIAEEAQRRHREAYQDDYSKTLEPGS 788 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 Q R GGE HA NP+ L A R N + Y + + LR+L R P Sbjct: 789 DFQWRNGGEHHAFNPKTIHTLQWACRRNDYNLFKQYTKAADEERIGFLRNLFAFDGNRKP 848 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSP 540 + + +VE A SIV+RF TG MS G++S+E HEA+AIAMNR+GGKSNSGEGGEDP R+ P Sbjct: 849 LKLEEVESAESIVKRFKTGAMSFGSLSKEAHEALAIAMNRLGGKSNSGEGGEDPKRFVP 907
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 145 bits (366), Expect = 9e-35 Identities = 87/191 (45%), Positives = 113/191 (59%), Gaps = 9/191 (4%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETL-----SFWVRAFSEDTAKR 168 Y GAQIFE GL EV++ F G+ S++ G T L ++ L +F R FS +A+ Sbjct: 852 YKGAQIFEALGLSSEVIEKCFAGTPSRVEGATFEMLAQDALHLHELAFPSRIFSPGSAEA 911 Query: 169 --LENFGFIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQ--HLASRPVNVLRDL 336 L N G R GGE H N+P L +A R S +AY Y + H ++ N LR L Sbjct: 912 VALPNPGDYHWRKGGEVHLNDPLAIAKLQEAARTNSVDAYKQYSKTIHELNKACN-LRGL 970 Query: 337 VELKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGG 516 ++ K + +PI +VEPA+ IV+RFCTG MS G+IS E H A+A AMN IGGKSN+GEGG Sbjct: 971 LKFKDAASKVPISEVEPASEIVKRFCTGAMSYGSISLEAHTALATAMNTIGGKSNTGEGG 1030 Query: 517 EDPIRWSPLTD 549 E P R PL D Sbjct: 1031 EQPSRMEPLAD 1041
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 138 bits (348), Expect = 1e-32 Identities = 76/181 (41%), Positives = 108/181 (59%), Gaps = 5/181 (2%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKR---LE 174 Y GAQIFE G+ EV++ F G+ S+I G+T + + + R + D + R + Sbjct: 803 YKGAQIFEALGIDNEVINKCFLGTASRIRGVTFEHIALDAFALHERGYPTDQSIRSLQIP 862 Query: 175 NFGFIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQ-HLASRPVNVLRDLVELKS 351 + G R GGE H N+P+ L A+R K++ AY + + H LR +++ Sbjct: 863 DMGDFYYRDGGEQHVNHPKAIASLQDAVRNKNEAAYAEFSRTHYEQTRRCTLRGMLDFDF 922 Query: 352 ERTP-IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPI 528 + + IPI +VEP T IV RFCTG MS G+IS E+H ++AIAMNR+GGKSN+GEGGEDP Sbjct: 923 DSSQAIPIEQVEPWTEIVRRFCTGAMSYGSISMESHSSLAIAMNRLGGKSNTGEGGEDPA 982 Query: 529 R 531 R Sbjct: 983 R 983
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 134 bits (338), Expect = 2e-31 Identities = 72/177 (40%), Positives = 107/177 (60%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y +++FE GL +VV L F G+VS+IGG + + ++ L+ RA+ K + G Sbjct: 756 YRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWL--ARKPISQGG 813 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 ++ GGE+HA NP++ + L +A++ + Y Y + + RP LRDL+ + Sbjct: 814 LLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENA 873 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW 534 + I VEPA+ + +RF T MS+GA+S E HEA+A AMN IGG SNSGEGGEDP R+ Sbjct: 874 VNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARY 930
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 132 bits (333), Expect = 6e-31 Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 7/198 (3%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAK--RLEN 177 Y GAQIFE GL Q V+D FC + S+I G L + +E + AF+ L+ Sbjct: 762 YRGAQIFEAVGLNQSVIDEYFCRTSSRIQGSDLGVIAQEAILRHQHAFAPRPGDLHTLDV 821 Query: 178 FGFIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLA-----SRPVNVLRDLVE 342 G Q R GE H +P+ LL +A+RE + Y +Y+Q+ A ++ LR L++ Sbjct: 822 GGEYQWRKDGEEHLFSPQTIHLLQRAVREGN---YELYKQYAALVNEQNQKFFTLRGLLD 878 Query: 343 LKSERTPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGED 522 + +R IP+ +VEP +I++RF TG MS G+IS+E HE++AIAMNRIGGKSN+GEGGED Sbjct: 879 FQ-DRESIPLEEVEPIEAIMKRFKTGAMSYGSISKEAHESLAIAMNRIGGKSNTGEGGED 937 Query: 523 PIRWSPLTDVVDGYSATL 576 P R++ D D ++ + Sbjct: 938 PERFTWTNDQGDSKNSAI 955
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 126 bits (317), Expect = 4e-29 Identities = 71/179 (39%), Positives = 103/179 (57%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFG 183 Y G FE GL + +V F VS+I G+ LN + ++ L A++E+ L G Sbjct: 755 YRGGGNFEAIGLSRALVAEHFPAMVSRISGIGLNGIQKKVLEQHATAYNEEVVA-LPVGG 813 Query: 184 FIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTP 363 F + R G+ H + L +A+ S + Y + + RP LRDL+EL+S + P Sbjct: 814 FYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKKYSEQVNKRPPMQLRDLLELRSTKAP 873 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSP 540 +P+ +VE T+I +RF T GMS+GA+S E H + +AMNRIG KS+SGEGGEDP R+ P Sbjct: 874 VPVDEVESITAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRP 932
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 124 bits (310), Expect = 3e-28 Identities = 76/182 (41%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Frame = +1 Query: 4 YCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLNELGRETLSFWVRAF-SEDTAKRLENF 180 Y GAQIFE GL +VDL F G+ S+I G+T L ++ S R + S T + N Sbjct: 794 YKGAQIFEALGLDNSIVDLCFTGTSSRIRGVTFEYLAQDAFSLHERGYPSRQTISKSVNL 853 Query: 181 ---GFIQSRPGGEFHANNPEMSKLLHKAIREKSDNAYTIY-QQHLASRPVNVLRDLVELK 348 G R GG H N P L +R K+D ++ +Y ++ + + LR L+EL Sbjct: 854 PESGEYHFRDGGYKHVNEPTAIASLQDTVRNKNDVSWQLYVKKEMEAIRDCTLRGLLELD 913 Query: 349 SERT-PIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDP 525 E + IP+ +VEP T I RF +G MS G+IS E H +AIAMNR+G KSN GEGGED Sbjct: 914 FENSVSIPLEQVEPWTEIARRFASGAMSYGSISMEAHSTLAIAMNRLGAKSNCGEGGEDA 973 Query: 526 IR 531 R Sbjct: 974 ER 975
>MUTS_LACJO (P61668) DNA mismatch repair protein mutS| Length = 857 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/74 (25%), Positives = 34/74 (45%) Frame = +1 Query: 244 LHKAIREKSDNAYTIYQQHLASRPVNVLRDLVELKSERTPIPIGKVEPATSIVERFCTGG 423 LHK + +D +Y I+ LA P VLR+ + +++PA+ ++ F Sbjct: 753 LHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLKRLEKQGASELQPASEQLDLFVPEE 812 Query: 424 MSLGAISRETHEAI 465 S AIS + + + Sbjct: 813 ASAPAISDDEKDVL 826
>LPXK_MANSM (Q65U20) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 325 Score = 31.2 bits (69), Expect = 2.3 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +1 Query: 343 LKSERTPIPI-----------GKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIG 489 +KS R P+PI GK +V+ G+ +G ISR A+ + Sbjct: 37 IKSYRAPVPIVIVGNLSVGGNGKTPVVIWLVKALQQNGLRVGVISRGYGSQSAVYPLLVT 96 Query: 490 GKSNSGEGGEDPIRWSPLTDV 552 K++ EGG++P+ + T V Sbjct: 97 EKTDPLEGGDEPVLIAQRTQV 117
>CP6A1_MUSDO (P13527) Cytochrome P450 6A1 (EC 1.14.14.1) (CYPVIA1)| Length = 509 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = +1 Query: 73 SVSKIGGLTLNELGRETLSFWVRAFSEDTAKRLENFGFIQSRPGGEFHANNPEMSKLLHK 252 S+SK+GGLT NEL + F++ F +T+ F + A N ++ L + Sbjct: 283 SISKLGGLTFNELAAQVFVFFLGGF--ETSSSTMGFALYEL-------AQNQQLQDRLRE 333 Query: 253 AIREKSD 273 + E D Sbjct: 334 EVNEVFD 340
>Y676_METJA (Q58089) Putative hydrogenase expression/formation protein MJ0676| Length = 335 Score = 30.0 bits (66), Expect = 5.2 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 379 VEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSG 507 V P ++ER G+ + A+ T +A A+N + KSN G Sbjct: 198 VAPINKLIERVLEEGIQINAMKDPTRGGLADALNEMAEKSNIG 240
>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein| Length = 442 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +1 Query: 421 GMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWSPLTDVVDGYSATL 576 GMS GA+S EA+ G + +G+GG +TD G+S TL Sbjct: 94 GMSFGALSGPAKEALGRGATASGTSTTTGDGG--------MTDEERGHSQTL 137
>MURC_AQUAE (O67373) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 454 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +1 Query: 163 KRLENFGFIQSRPGGEFHANNPEMSKLLHKAIREK--SDNAYTIYQQHLASRPVNVLRDL 336 +RLE G+ ++ P + + ++P K + ++R+ N ++Q H SR + D Sbjct: 312 RRLELKGYYKNSPVYDDYGHHPTEIKAVINSLRDMYPDKNLLVVFQPHRYSRTYYLFEDF 371 Query: 337 VELKSERTPIPIGKVEPAT 393 V++ + + + + PA+ Sbjct: 372 VKVLKDIDKLIVTDIYPAS 390
>MUTS_NITEU (Q82U08) DNA mismatch repair protein mutS| Length = 873 Score = 29.6 bits (65), Expect = 6.8 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 364 IPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKS 498 I G+ + VE + + LGAI+RE + + I +GGKS Sbjct: 591 IEAGRHPVVENQVEHYIANDVQLGAITRENRQMLVITGPNMGGKS 635
>MUTS_CARHZ (Q3ACA5) DNA mismatch repair protein mutS| Length = 841 Score = 29.6 bits (65), Expect = 6.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 229 EMSKLLHKAIREKSDNAYTIYQQHLASRPVNVLRDLVEL 345 E K LHK + K+D +Y IY LA P V+ E+ Sbjct: 740 EEVKFLHKVVPGKTDKSYGIYVAKLAGLPREVVERAYEI 778
>THYX_STRCO (O86840) Thymidylate synthase thyX (EC 2.1.1.148) (TS) (TSase)| Length = 246 Score = 29.3 bits (64), Expect = 8.9 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +1 Query: 145 FSEDTAKRLENFGFIQSRPGGE-FHANNPEMSKLLHKAIREKSDNAYTIYQQHLASRPVN 321 ++ D +++L Q RPG F PE +L+ A+ + AY YQQ LA+ Sbjct: 114 YAPDASRKLVQ----QGRPGKYVFVEGTPEQHELVGSAMEDSYRQAYATYQQMLAA---G 166 Query: 322 VLRDLVELKSERTPIPIG 375 V R++ R +P+G Sbjct: 167 VAREVA-----RAVLPVG 179
>G11A_ORYSA (P47997) Protein kinase G11A (EC 2.7.11.1)| Length = 589 Score = 29.3 bits (64), Expect = 8.9 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Frame = +1 Query: 331 DLVELKSERTPIPIGKVEPATSIVERFCTGGM--SLGAISRETHEAIAIAMNRIGGKSNS 504 D E+K+E +P + +VE G S A+ +E A A R+ G+S + Sbjct: 77 DPAEVKAEGNLVPKRLADEEKGVVEDGIANGSLKSSSALGKEHGIASASGSARLVGRSET 136 Query: 505 GEGGEDPIRWSPLT--DVVDG------YSATLPH 582 GE G R P T DV D S T PH Sbjct: 137 GERGFSSSRCRPSTSSDVSDESACSSISSVTKPH 170
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 29.3 bits (64), Expect = 8.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 100 LNELGRETLSFWVRAFSEDTAKRLENFGFIQSRPGG 207 L E +E W+R D ++++ FI S+PGG Sbjct: 137 LQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.137 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,526,964 Number of Sequences: 219361 Number of extensions: 1775319 Number of successful extensions: 5370 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 5129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5359 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)