ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19c21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y12595.1|OSGOG2 O.sativa mRNA for Fd-GOGAT, partial, clone OsGog2 Length = 4120 Score = 718 bits (362), Expect = 0.0 Identities = 530/586 (90%) Strand = Plus / Plus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || | Sbjct: 1139 gttattgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcg 1198 Query: 62 cgttctgtgggagtgtatcgaaaattggaggactcacccttaatgagctgggtcgagaaa 121 | |||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 1199 ccttctgtggaagtgtatcgaaaattggaggtctcacccttgatgagctgggtagagaaa 1258 Query: 122 cactatcattctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcg 181 || ||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||| | Sbjct: 1259 cattatcattctgggtgaaggcgttctcagaagatactgcgaagaggctagagaactttg 1318 Query: 182 gattcatccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagc 241 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1319 gattcattcaatccagacctggaggtgaatatcatgcaaataatcctgagatgtcaaagc 1378 Query: 242 tgctgcacaaagcaattcgtgaaaaaagtgataatgcatacaccatctaccaacaacatc 301 |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 1379 tgctgcacaaagcagttcgtgaaaaaagtgacaatgcatacaccgtctaccaacaacatc 1438 Query: 302 ttgcaagccgtcctgtcaatgttcttcgagatcttgtagaactaaagagtgaaaggacgc 361 ||||||||||||||||||||||||||||||||||| |||| | |||||||| | | | Sbjct: 1439 ttgcaagccgtcctgtcaatgttcttcgagatcttctagagttgaagagtgatcgtgccc 1498 Query: 362 ctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtg 421 |||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 1499 ctattcctatcggtaaagttgagcctgcaacctccatcgttgagcgattttgtacaggtg 1558 Query: 422 gaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaata 481 |||||||| | || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1559 gaatgtcccttggagctatttccagagaaacacatgaagctattgcaattgcaatgaata 1618 Query: 482 ggataggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtcccc 541 | |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1619 gaataggtgggaaatctaactccggagaaggtggtgaggacccaatccgctggagtcccc 1678 Query: 542 ttacagatgttgttgatggatattctgcgacacttcctcatctcaa 587 || ||||||| | ||||| |||||| | ||||||||||||||||| Sbjct: 1679 ttgcagatgtagaggatgggtattctccaacacttcctcatctcaa 1724
>dbj|AK068130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132D11, full insert sequence Length = 3596 Score = 718 bits (362), Expect = 0.0 Identities = 530/586 (90%) Strand = Plus / Plus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || | Sbjct: 754 gttattgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcg 813 Query: 62 cgttctgtgggagtgtatcgaaaattggaggactcacccttaatgagctgggtcgagaaa 121 | |||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 814 ccttctgtggaagtgtatcgaaaattggaggtctcacccttgatgagctgggtagagaaa 873 Query: 122 cactatcattctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcg 181 || ||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||| | Sbjct: 874 cattatcattctgggtgaaggcgttctcagaagatactgcgaagaggctagagaactttg 933 Query: 182 gattcatccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagc 241 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 934 gattcattcaatccagacctggaggtgaatatcatgcaaataatcctgagatgtcaaagc 993 Query: 242 tgctgcacaaagcaattcgtgaaaaaagtgataatgcatacaccatctaccaacaacatc 301 |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 994 tgctgcacaaagcagttcgtgaaaaaagtgacaatgcatacaccgtctaccaacaacatc 1053 Query: 302 ttgcaagccgtcctgtcaatgttcttcgagatcttgtagaactaaagagtgaaaggacgc 361 ||||||||||||||||||||||||||||||||||| |||| | |||||||| | | | Sbjct: 1054 ttgcaagccgtcctgtcaatgttcttcgagatcttctagagttgaagagtgatcgtgccc 1113 Query: 362 ctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtg 421 |||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 1114 ctattcctatcggtaaagttgagcctgcaacctccatcgttgagcgattttgtacaggtg 1173 Query: 422 gaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaata 481 |||||||| | || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1174 gaatgtcccttggagctatttccagagaaacacatgaagctattgcaattgcaatgaata 1233 Query: 482 ggataggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtcccc 541 | |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1234 gaataggtgggaaatctaactccggagaaggtggtgaggacccaatccgctggagtcccc 1293 Query: 542 ttacagatgttgttgatggatattctgcgacacttcctcatctcaa 587 || ||||||| | ||||| |||||| | ||||||||||||||||| Sbjct: 1294 ttgcagatgtagaggatgggtattctccaacacttcctcatctcaa 1339
>gb|M59190.1|MZEFEGLU Zea mays ferredoxin-dependent glutamate synthase mRNA, complete cds Length = 5617 Score = 620 bits (313), Expect = e-174 Identities = 514/581 (88%) Strand = Plus / Plus Query: 7 tgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttgcgttc 66 ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct: 2812 tgtggagctcagatctttgaaatttatggtcttggtcaagaagttgttgatcttgccttc 2871 Query: 67 tgtgggagtgtatcgaaaattggaggactcacccttaatgagctgggtcgagaaacacta 126 ||||| |||||||||||||||||||| ||||| ||| ||||||||||| | || || || Sbjct: 2872 tgtggaagtgtatcgaaaattggaggtctcacacttgatgagctgggtagggagacctta 2931 Query: 127 tcattctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattc 186 ||||||||||||| ||| ||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 2932 tcattctgggtgaaggcgttctctgaagatactgcaaagaggctagaaaactttggattt 2991 Query: 187 atccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctg 246 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 2992 atccaatccagacctggaggtgaataccatgcaaataatcctgagatgtccaagctgttg 3051 Query: 247 cacaaagcaattcgtgaaaaaagtgataatgcatacaccatctaccaacaacatcttgca 306 |||||||||||||| || ||| |||||||||| ||||| |||||||||||||||||||| Sbjct: 3052 cacaaagcaattcgcgagaaacgtgataatgcgtacactgtctaccaacaacatcttgca 3111 Query: 307 agccgtcctgtcaatgttcttcgagatcttgtagaactaaagagtgaaaggacgcctatt 366 |||||||||||||||||||||||||||||| | ||| | || ||||| | | |||||| Sbjct: 3112 agccgtcctgtcaatgttcttcgagatcttcttgaattgaaaagtgatcgtgcacctatt 3171 Query: 367 cctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtggaatg 426 |||||||||||||| ||| |||||||||| || ||||| |||||||| || ||||||||| Sbjct: 3172 cctattggcaaagtggagtctgcaacctccattgttgaacgtttttgtactggtggaatg 3231 Query: 427 tccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaataggata 486 ||| | || || ||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 3232 tccctaggagccatttcaagggaaacgcatgaagctattgcaattgcaatgaatagaata 3291 Query: 487 ggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccccttaca 546 ||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||| || Sbjct: 3292 ggtgggaaatctaattcaggagaaggtggtgaggatccaatccgttggaatcccctcact 3351 Query: 547 gatgttgttgatggatattctgcgacacttcctcatctcaa 587 |||||||| ||||| |||||| | ||||||||||||||||| Sbjct: 3352 gatgttgtagatggttattctccaacacttcctcatctcaa 3392
>gb|AY109539.1| Zea mays CL2484_1 mRNA sequence Length = 5572 Score = 591 bits (298), Expect = e-165 Identities = 509/581 (87%) Strand = Plus / Plus Query: 7 tgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttgcgttc 66 ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct: 2812 tgtggagctcagatctttgaaatttatggtcttggtcaagaagttgttgatcttgccttc 2871 Query: 67 tgtgggagtgtatcgaaaattggaggactcacccttaatgagctgggtcgagaaacacta 126 ||||| |||||||||||||||||||| ||||| ||| ||||||||||| | || || || Sbjct: 2872 tgtggaagtgtatcgaaaattggaggtctcacacttgatgagctgggtagggagacctta 2931 Query: 127 tcattctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattc 186 ||||||||||||| ||| ||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 2932 tcattctgggtgaaggcgttctctgaagatactgcaaagaggctagaaaactttggattt 2991 Query: 187 atccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctg 246 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 2992 atccaatccagacctggaggtgaataccatgcaaataatcctgagatgtccaagctgttg 3051 Query: 247 cacaaagcaattcgtgaaaaaagtgataatgcatacaccatctaccaacaacatcttgca 306 |||||||||||||| || ||| |||||||||| ||||| |||||||||||||||||||| Sbjct: 3052 cacaaagcaattcgcgagaaacgtgataatgcgtacactgtctaccaacaacatcttgca 3111 Query: 307 agccgtcctgtcaatgttcttcgagatcttgtagaactaaagagtgaaaggacgcctatt 366 |||||||||||||||||||||||||||||| | ||| | || ||||| | | |||||| Sbjct: 3112 agccgtcctgtcaatgttcttcgagatcttcttgaattgaaaagtgatcgtgcacctatt 3171 Query: 367 cctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtggaatg 426 |||||||||||||| ||| |||||||||| || ||||| || | || ||||||||| Sbjct: 3172 cctattggcaaagtggagtctgcaacctccattgttgaacgnnnnngtactggtggaatg 3231 Query: 427 tccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaataggata 486 ||| | || || ||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 3232 tccctaggagccatttcaagggaaacgcatgaagctattgcaattgcaatgaatagaata 3291 Query: 487 ggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccccttaca 546 ||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||| || Sbjct: 3292 ggtgggaaatctaattcaggagaaggtggtgaggatccaatccgttggaatcccctcact 3351 Query: 547 gatgttgttgatggatattctgcgacacttcctcatctcaa 587 |||||||| ||||| |||||| | ||||||||||||||||| Sbjct: 3352 gatgttgtagatggttattctccaacacttcctcatctcaa 3392
>emb|Y12594.1|OSGOG1 O.sativa mRNA for Fd-GOGAT, partial, clone OsGog1 Length = 2851 Score = 573 bits (289), Expect = e-160 Identities = 403/441 (91%) Strand = Plus / Plus Query: 147 ctcagaagataccgcgaagaggctggaaaacttcggattcatccaatccagacctggagg 206 |||||||||||| ||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 15 ctcagaagatactgcgaagaggctagagaactttggattcattcaatccagacctggagg 74 Query: 207 tgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtgaaaa 266 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 75 tgaatatcatgcaaataatcctgagatgtcaaagctgctgcacaaagcagttcgtgaaaa 134 Query: 267 aagtgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgttct 326 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135 aagtgacaatgcatacaccgtctaccaacaacatcttgcaagccgtcctgtcaatgttct 194 Query: 327 tcgagatcttgtagaactaaagagtgaaaggacgcctattcctattggcaaagttgagcc 386 |||||||||| |||| | |||||||| | | ||||||||||| || ||||||||||| Sbjct: 195 tcgagatcttctagagttgaagagtgatcgtgcccctattcctatcggtaaagttgagcc 254 Query: 387 tgcaacctctatcgttgagcgtttttgcacaggtggaatgtccttgggcgctatttccag 446 ||||||||| ||||||||||| ||||| ||||||||||||||| | || ||||||||||| Sbjct: 255 tgcaacctccatcgttgagcgattttgtacaggtggaatgtcccttggagctatttccag 314 Query: 447 agaaacccatgaagctattgcaattgcaatgaataggataggtggaaaatctaattcagg 506 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||| || || Sbjct: 315 agaaacacatgaagctattgcaattgcaatgaatagaataggtgggaaatctaactccgg 374 Query: 507 agaaggtggtgaggacccaatccgctggagtccccttacagatgttgttgatggatattc 566 ||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||| Sbjct: 375 agaaggtggtgaggacccaatccgctggagtccccttgcagatgtagaggatgggtattc 434 Query: 567 tgcgacacttcctcatctcaa 587 | | ||||||||||||||||| Sbjct: 435 tccaacacttcctcatctcaa 455
>ref|XM_479407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4923 Score = 498 bits (251), Expect = e-137 Identities = 350/383 (91%) Strand = Plus / Plus Query: 205 ggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtgaa 264 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2746 ggtgaatatcatgcaaataatcctgagatgtcaaagctgctgcacaaagcagttcgtgaa 2805 Query: 265 aaaagtgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgtt 324 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2806 aaaagtgacaatgcatacaccgtctaccaacaacatcttgcaagccgtcctgtcaatgtt 2865 Query: 325 cttcgagatcttgtagaactaaagagtgaaaggacgcctattcctattggcaaagttgag 384 |||||||||||| |||| | |||||||| | | ||||||||||| || ||||||||| Sbjct: 2866 cttcgagatcttctagagttgaagagtgatcgtgcccctattcctatcggtaaagttgag 2925 Query: 385 cctgcaacctctatcgttgagcgtttttgcacaggtggaatgtccttgggcgctatttcc 444 ||||||||||| ||||||||||| ||||| ||||||||||||||| | || ||||||||| Sbjct: 2926 cctgcaacctccatcgttgagcgattttgtacaggtggaatgtcccttggagctatttcc 2985 Query: 445 agagaaacccatgaagctattgcaattgcaatgaataggataggtggaaaatctaattca 504 |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 2986 agagaaacacatgaagctattgcaattgcaatgaatagaataggtgggaaatctaactcc 3045 Query: 505 ggagaaggtggtgaggacccaatccgctggagtccccttacagatgttgttgatggatat 564 ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 3046 ggagaaggtggtgaggacccaatccgctggagtccccttgcagatgtagaggatgggtat 3105 Query: 565 tctgcgacacttcctcatctcaa 587 ||| | ||||||||||||||||| Sbjct: 3106 tctccaacacttcctcatctcaa 3128 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 7 tgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttgcgttc 66 |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct: 2467 tgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcgccttc 2526 Query: 67 tgtgggagtgtatcgaaaattggaggactcacccttaatgag 108 ||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 2527 tgtggaagtgtatcgaaaattggaggtctcacccttgatgag 2568 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 148 tcagaagataccgcgaagaggctggaaaacttcggattcatccaatccagacctggaggt 207 ||||||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 2569 tcagaagatactgcgaagaggctagagaactttggattcattcaatccagacctggaggt 2628 Query: 208 gaatt 212 |||| Sbjct: 2629 aaatt 2633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 220 bits (111), Expect = 4e-54 Identities = 177/199 (88%) Strand = Plus / Minus Query: 322 gttcttcgagatcttgtagaactaaagagtgaaaggacgcctattcctattggcaaagtt 381 ||||||||||||||| |||| | |||||||| | | ||||||||||| || |||||| Sbjct: 27674626 gttcttcgagatcttctagagttgaagagtgatcgtgcccctattcctatcggtaaagtt 27674567 Query: 382 gagcctgcaacctctatcgttgagcgtttttgcacaggtggaatgtccttgggcgctatt 441 |||||||||||||| ||||||||||| ||||| ||||||||||||||| | || |||||| Sbjct: 27674566 gagcctgcaacctccatcgttgagcgattttgtacaggtggaatgtcccttggagctatt 27674507 Query: 442 tccagagaaacccatgaagctattgcaattgcaatgaataggataggtggaaaatctaat 501 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 27674506 tccagagaaacacatgaagctattgcaattgcaatgaatagaataggtgggaaatctaac 27674447 Query: 502 tcaggagaaggtggtgagg 520 || |||||||||||||||| Sbjct: 27674446 tccggagaaggtggtgagg 27674428 Score = 208 bits (105), Expect = 2e-50 Identities = 117/121 (96%) Strand = Plus / Minus Query: 204 aggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtga 263 |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27674837 aggtgaatatcatgcaaataatcctgagatgtcaaagctgctgcacaaagcagttcgtga 27674778 Query: 264 aaaaagtgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgt 323 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 27674777 aaaaagtgacaatgcatacaccgtctaccaacaacatcttgcaagccgtcctgtcaatgt 27674718 Query: 324 t 324 | Sbjct: 27674717 t 27674717 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 107 agctgggtcgagaaacactatcattctgggtgagggctttctcagaagataccgcgaaga 166 |||||||| |||||||| ||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 27675555 agctgggtagagaaacattatcattctgggtgaaggcgttctcagaagatactgcgaaga 27675496 Query: 167 ggctggaaaacttcggattcatccaatccagacctggaggt 207 |||| || ||||| |||||||| |||||||||||||||||| Sbjct: 27675495 ggctagagaactttggattcattcaatccagacctggaggt 27675455 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || | Sbjct: 27675867 gttattgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcg 27675808 Query: 62 cgttctgtgggagtgtatcgaaaattggaggactcacccttaatgag 108 | |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 27675807 ccttctgtggaagtgtatcgaaaattggaggtctcacccttgatgag 27675761 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%), Gaps = 10/115 (8%) Strand = Plus / Minus Query: 216 tgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtgaaaaaa------g 269 ||||||||||||||||||||||||||||| || ||||||| ||| |||||||| | Sbjct: 28581264 tgcaaataatcctgagatgtcaaagctgccgcgcaaagcagttcatgaaaaaaaaaaagg 28581205 Query: 270 tgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgtt 324 |||||||||||||||||| ||||| || | ||||| |||||||||||||||| Sbjct: 28581204 tgataatgcatacaccatgtaccagcatc----tgcaaaccgtcctgtcaatgtt 28581154 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 518 aggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttc 577 |||||||||||||||||||||||||| ||||||| | ||||| |||||| | ||||||| Sbjct: 27674324 aggacccaatccgctggagtccccttgcagatgtagaggatgggtattctccaacacttc 27674265 Query: 578 ctcatctcaa 587 |||||||||| Sbjct: 27674264 ctcatctcaa 27674255 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 519 ggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttcc 578 ||||||||||||||| ||||||||| ||||||||||||||| |||||| | | |||| | Sbjct: 28580907 ggacccaatccgctgaagtccccttgcagatgttgttgatgagtattctccaatacttgc 28580848 Query: 579 tcatctcaaa 588 |||||||||| Sbjct: 28580847 tcatctcaaa 28580838 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaatag 482 |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 28581052 gctatttccagataaacaaatgaagctattgcaattgcaatgaatag 28581006
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 220 bits (111), Expect = 4e-54 Identities = 177/199 (88%) Strand = Plus / Minus Query: 322 gttcttcgagatcttgtagaactaaagagtgaaaggacgcctattcctattggcaaagtt 381 ||||||||||||||| |||| | |||||||| | | ||||||||||| || |||||| Sbjct: 131619 gttcttcgagatcttctagagttgaagagtgatcgtgcccctattcctatcggtaaagtt 131560 Query: 382 gagcctgcaacctctatcgttgagcgtttttgcacaggtggaatgtccttgggcgctatt 441 |||||||||||||| ||||||||||| ||||| ||||||||||||||| | || |||||| Sbjct: 131559 gagcctgcaacctccatcgttgagcgattttgtacaggtggaatgtcccttggagctatt 131500 Query: 442 tccagagaaacccatgaagctattgcaattgcaatgaataggataggtggaaaatctaat 501 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 131499 tccagagaaacacatgaagctattgcaattgcaatgaatagaataggtgggaaatctaac 131440 Query: 502 tcaggagaaggtggtgagg 520 || |||||||||||||||| Sbjct: 131439 tccggagaaggtggtgagg 131421 Score = 208 bits (105), Expect = 2e-50 Identities = 117/121 (96%) Strand = Plus / Minus Query: 204 aggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtga 263 |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131830 aggtgaatatcatgcaaataatcctgagatgtcaaagctgctgcacaaagcagttcgtga 131771 Query: 264 aaaaagtgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgt 323 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131770 aaaaagtgacaatgcatacaccgtctaccaacaacatcttgcaagccgtcctgtcaatgt 131711 Query: 324 t 324 | Sbjct: 131710 t 131710 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 107 agctgggtcgagaaacactatcattctgggtgagggctttctcagaagataccgcgaaga 166 |||||||| |||||||| ||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 132548 agctgggtagagaaacattatcattctgggtgaaggcgttctcagaagatactgcgaaga 132489 Query: 167 ggctggaaaacttcggattcatccaatccagacctggaggt 207 |||| || ||||| |||||||| |||||||||||||||||| Sbjct: 132488 ggctagagaactttggattcattcaatccagacctggaggt 132448 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || | Sbjct: 132860 gttattgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcg 132801 Query: 62 cgttctgtgggagtgtatcgaaaattggaggactcacccttaatgag 108 | |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 132800 ccttctgtggaagtgtatcgaaaattggaggtctcacccttgatgag 132754 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 518 aggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttc 577 |||||||||||||||||||||||||| ||||||| | ||||| |||||| | ||||||| Sbjct: 131317 aggacccaatccgctggagtccccttgcagatgtagaggatgggtattctccaacacttc 131258 Query: 578 ctcatctcaa 587 |||||||||| Sbjct: 131257 ctcatctcaa 131248
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 220 bits (111), Expect = 4e-54 Identities = 177/199 (88%) Strand = Plus / Minus Query: 322 gttcttcgagatcttgtagaactaaagagtgaaaggacgcctattcctattggcaaagtt 381 ||||||||||||||| |||| | |||||||| | | ||||||||||| || |||||| Sbjct: 53728 gttcttcgagatcttctagagttgaagagtgatcgtgcccctattcctatcggtaaagtt 53669 Query: 382 gagcctgcaacctctatcgttgagcgtttttgcacaggtggaatgtccttgggcgctatt 441 |||||||||||||| ||||||||||| ||||| ||||||||||||||| | || |||||| Sbjct: 53668 gagcctgcaacctccatcgttgagcgattttgtacaggtggaatgtcccttggagctatt 53609 Query: 442 tccagagaaacccatgaagctattgcaattgcaatgaataggataggtggaaaatctaat 501 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 53608 tccagagaaacacatgaagctattgcaattgcaatgaatagaataggtgggaaatctaac 53549 Query: 502 tcaggagaaggtggtgagg 520 || |||||||||||||||| Sbjct: 53548 tccggagaaggtggtgagg 53530 Score = 208 bits (105), Expect = 2e-50 Identities = 117/121 (96%) Strand = Plus / Minus Query: 204 aggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtga 263 |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 53939 aggtgaatatcatgcaaataatcctgagatgtcaaagctgctgcacaaagcagttcgtga 53880 Query: 264 aaaaagtgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgt 323 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 53879 aaaaagtgacaatgcatacaccgtctaccaacaacatcttgcaagccgtcctgtcaatgt 53820 Query: 324 t 324 | Sbjct: 53819 t 53819 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 107 agctgggtcgagaaacactatcattctgggtgagggctttctcagaagataccgcgaaga 166 |||||||| |||||||| ||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 54657 agctgggtagagaaacattatcattctgggtgaaggcgttctcagaagatactgcgaaga 54598 Query: 167 ggctggaaaacttcggattcatccaatccagacctggaggt 207 |||| || ||||| |||||||| |||||||||||||||||| Sbjct: 54597 ggctagagaactttggattcattcaatccagacctggaggt 54557 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||| |||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || || | Sbjct: 54969 gttattgtggagcccagatcttcgaaatttatggccttggtcaagaggttgttgatctcg 54910 Query: 62 cgttctgtgggagtgtatcgaaaattggaggactcacccttaatgag 108 | |||||||| |||||||||||||||||||| ||||||||| ||||| Sbjct: 54909 ccttctgtggaagtgtatcgaaaattggaggtctcacccttgatgag 54863 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 518 aggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttc 577 |||||||||||||||||||||||||| ||||||| | ||||| |||||| | ||||||| Sbjct: 53426 aggacccaatccgctggagtccccttgcagatgtagaggatgggtattctccaacacttc 53367 Query: 578 ctcatctcaa 587 |||||||||| Sbjct: 53366 ctcatctcaa 53357
>ref|NM_180432.2| Arabidopsis thaliana GLU1 (FERREDOXIN-DEPENDENT GLUAMATE SYNTHASE 1) AT5G04140 (GLU1) transcript variant AT5G04140.2 mRNA, complete cds Length = 5199 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 2989 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 3048 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggacccaatc 528 ||||||||||||||||| ||||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 3049 attgcaatgaataggattggtgggaaatcaaactctggagaaggtggagaggatcctatc 3108 Query: 529 cgctggagtccccttacagatgttgttgatggatattctgcgacacttcctcatctcaaa 588 || |||| || ||||||||||| |||||||||||||| | ||||| || ||||||||| Sbjct: 3109 cgttggaagccacttacagatgtggttgatggatattcaccaacactaccacatctcaaa 3168 Query: 589 ggt 591 ||| Sbjct: 3169 ggt 3171 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| ||||||||||| | |||| |||| || || |||||||||||| |||| ||| Sbjct: 2770 caattcaggcctggaggtgagtatcattcaaacaacccagagatgtcaaagttgcttcac 2829 Query: 250 aaagcaattcgtgaaaaaagtgataatgcata 281 || || | |||||||| ||||| | |||||| Sbjct: 2830 aaggctgtccgtgaaaagagtgaaactgcata 2861
>ref|NM_120496.2| Arabidopsis thaliana GLU1 (FERREDOXIN-DEPENDENT GLUAMATE SYNTHASE 1) AT5G04140 (GLU1) transcript variant AT5G04140.1 mRNA, complete cds Length = 5304 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 3090 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 3149 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggacccaatc 528 ||||||||||||||||| ||||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 3150 attgcaatgaataggattggtgggaaatcaaactctggagaaggtggagaggatcctatc 3209 Query: 529 cgctggagtccccttacagatgttgttgatggatattctgcgacacttcctcatctcaaa 588 || |||| || ||||||||||| |||||||||||||| | ||||| || ||||||||| Sbjct: 3210 cgttggaagccacttacagatgtggttgatggatattcaccaacactaccacatctcaaa 3269 Query: 589 ggt 591 ||| Sbjct: 3270 ggt 3272 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| ||||||||||| | |||| |||| || || |||||||||||| |||| ||| Sbjct: 2871 caattcaggcctggaggtgagtatcattcaaacaacccagagatgtcaaagttgcttcac 2930 Query: 250 aaagcaattcgtgaaaaaagtgataatgcata 281 || || | |||||||| ||||| | |||||| Sbjct: 2931 aaggctgtccgtgaaaagagtgaaactgcata 2962
>emb|Y09667.1|ATFDGSYN A.thaliana mRNA for ferredoxin-dependent glutamate synthase Length = 5178 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 2989 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 3048 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggacccaatc 528 ||||||||||||||||| ||||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 3049 attgcaatgaataggattggtgggaaatcaaactctggagaaggtggagaggatcctatc 3108 Query: 529 cgctggagtccccttacagatgttgttgatggatattctgcgacacttcctcatctcaaa 588 || |||| || ||||||||||| |||||||||||||| | ||||| || ||||||||| Sbjct: 3109 cgttggaagccacttacagatgtggttgatggatattcaccaacactaccacatctcaaa 3168 Query: 589 ggt 591 ||| Sbjct: 3169 ggt 3171 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| ||||||||||| | |||| |||| || || |||||||||||| |||| ||| Sbjct: 2770 caattcaggcctggaggtgagtatcattcaaacaacccagagatgtcaaagttgcttcac 2829 Query: 250 aaagcaattcgtgaaaaaagtgataatgcata 281 || || | |||||||| ||||| | |||||| Sbjct: 2830 aaggctgtccgtgaaaagagtgaaactgcata 2861
>gb|U39287.1|ATU39287 Arabidopsis thaliana ferredoxin-dependent glutamate synthase precursor (GLU1) mRNA, complete cds Length = 5303 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 3089 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 3148 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggacccaatc 528 ||||||||||||||||| ||||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 3149 attgcaatgaataggattggtgggaaatcaaactctggagaaggtggagaggatcctatc 3208 Query: 529 cgctggagtccccttacagatgttgttgatggatattctgcgacacttcctcatctcaaa 588 || |||| || ||||||||||| |||||||||||||| | ||||| || ||||||||| Sbjct: 3209 cgttggaagccacttacagatgtggttgatggatattcaccaacactaccacatctcaaa 3268 Query: 589 ggt 591 ||| Sbjct: 3269 ggt 3271 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| ||||||||||| | |||| |||| || || |||||||||||| |||| ||| Sbjct: 2870 caattcaggcctggaggtgagtatcattcaaacaacccagagatgtcaaagttgcttcac 2929 Query: 250 aaagcaattcgtgaaaaaagtgataatgcata 281 || || | |||||||| ||||| | |||||| Sbjct: 2930 aaggctgtccgtgaaaagagtgaaactgcata 2961
>gb|AF039851.1|AF039851 Glycine max ferredoxin-dependent glutamate synthase (glu) mRNA, partial cds Length = 3481 Score = 133 bits (67), Expect = 7e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||||||||| || ||||| | || ||||||||||||||||| |||||||| |||||| Sbjct: 1114 ttttgcacagggggcatgtcacttggagctatttccagagaaactcatgaagcaattgca 1173 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggacccaatc 528 ||||| ||||| || |||||||||||||| |||||||| |||||||| ||||| || | Sbjct: 1174 attgccatgaacagaataggtggaaaatcaaattcaggggaaggtggggaggatcctgtt 1233 Query: 529 cgctggagtccccttacagatgttgttgatggatattctgcgacacttcctcatctcaaa 588 ||||||| || ||||||||||| || ||||| || ||| | || ||||||||||| ||| Sbjct: 1234 cgctggaaaccacttacagatgtcgtagatggttactctccaactcttcctcatcttaaa 1293 Query: 589 ggt 591 ||| Sbjct: 1294 ggt 1296 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 130 ttctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattcatc 189 |||||||||| ||| ||||| |||||||| || || ||| ||||||| || ||||| || Sbjct: 835 ttctgggtgaaggcattctctgaagatacagctaaaaggttggaaaattttggatttata 894 Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 || | |||||| ||||| || | |||||||||||| || || ||||||||| |||| ||| Sbjct: 895 cagttcagaccaggaggggagtatcatgcaaataacccagaaatgtcaaagttgctccac 954 Query: 250 aaagc 254 ||||| Sbjct: 955 aaagc 959
>gb|AF061515.1| Spinacia oleracea ferroxin-dependent glutamate synthase precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 5015 Score = 121 bits (61), Expect = 3e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 371 ttggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtggaatgtcct 430 |||| |||||||| ||||| || ||||| || || || ||||| || |||||||||||| Sbjct: 2558 ttggtaaagttgaacctgctacatctattgtcgaacgcttttgtactggtggaatgtccc 2617 Query: 431 tgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaataggataggtg 490 | || ||||| || || ||||| || ||||| ||||| ||||| ||||||||| |||| | Sbjct: 2618 ttggagctatctctagggaaacacacgaagcaattgcgattgcgatgaataggttaggcg 2677 Query: 491 gaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccccttacagatg 550 ||||||| || |||||||||||||||||||| |||||| | ||| | ||||| || |||| Sbjct: 2678 gaaaatccaactcaggagaaggtggtgaggatccaatcagatggcgacccctgaccgatg 2737 Query: 551 ttgttgatggatattctgcgacacttcctcatctcaaaggt 591 | |||||||| ||||| | || || |||||||| |||||| Sbjct: 2738 tggttgatgggtattcctctactctgcctcatcttaaaggt 2778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| |||||||| |||| ||||| ||| || || ||||||||||||||| ||||| Sbjct: 2377 caattcaggcctggaggggaatatcatgtaaacaacccagagatgtcaaagctgttgcac 2436 Query: 250 aaagc 254 ||||| Sbjct: 2437 aaagc 2441
>gb|U03006.1|SOGOGAT Spinacia oleracea ferredoxin-dependent glutamate synthase mRNA, partial cds Length = 4948 Score = 121 bits (61), Expect = 3e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 371 ttggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggtggaatgtcct 430 |||| |||||||| ||||| || ||||| || || || ||||| || |||||||||||| Sbjct: 2453 ttggtaaagttgaacctgctacatctattgtcgaacgcttttgtactggtggaatgtccc 2512 Query: 431 tgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaataggataggtg 490 | || ||||| || || ||||| || ||||| ||||| ||||| ||||||||| |||| | Sbjct: 2513 ttggagctatctctagggaaacacacgaagcaattgcgattgcgatgaataggttaggcg 2572 Query: 491 gaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccccttacagatg 550 ||||||| || |||||||||||||||||||| |||||| | ||| | ||||| || |||| Sbjct: 2573 gaaaatccaactcaggagaaggtggtgaggatccaatcagatggcgacccctgaccgatg 2632 Query: 551 ttgttgatggatattctgcgacacttcctcatctcaaaggt 591 | |||||||| ||||| | || || |||||||| |||||| Sbjct: 2633 tggttgatgggtattcctctactctgcctcatcttaaaggt 2673 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 190 caatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcac 249 |||| ||| |||||||| |||| ||||| ||| || || ||||||||||||||| ||||| Sbjct: 2272 caattcaggcctggaggggaatatcatgtaaacaacccagagatgtcaaagctgttgcac 2331 Query: 250 aaagc 254 ||||| Sbjct: 2332 aaagc 2336
>ref|NM_129687.3| Arabidopsis thaliana GLU2 AT2G41220 (GLU2) mRNA, complete cds Length = 5253 Score = 109 bits (55), Expect = 1e-20 Identities = 169/207 (81%) Strand = Plus / Plus Query: 361 cctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggt 420 ||||| ||| |||| || ||||||||||| |||||||||| || || ||||| |||||| Sbjct: 2869 cctatccctgttgggaaggttgagcctgcttcctctatcgtggaacggttttgtacaggt 2928 Query: 421 ggaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaat 480 |||||||| | || || || || |||||||| ||||| | ||||| ||||||||||| Sbjct: 2929 ggaatgtctcttggagcaatctcaagagaaactcatgagacaattgctattgcaatgaac 2988 Query: 481 aggataggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccc 540 || |||| |||||||| || ||||| ||||| || ||||| || |||||||||| || Sbjct: 2989 agattaggaggaaaatccaactcaggggaaggaggcgaggatccgatccgctggaagccg 3048 Query: 541 cttacagatgttgttgatggatattct 567 || ||||||||||||||||| |||||| Sbjct: 3049 ctaacagatgttgttgatgggtattct 3075 Score = 40.1 bits (20), Expect = 8.0 Identities = 71/88 (80%) Strand = Plus / Plus Query: 130 ttctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattcatc 189 |||||||||||||| || || || ||||| || || |||| || |||||||| ||||| Sbjct: 2638 ttctgggtgagggcattttctgaggatacagccaaacggctagagaacttcggtttcatt 2697 Query: 190 caatccagacctggaggtgaatttcatg 217 || | || ||||||||||||| ||||| Sbjct: 2698 cagtttaggcctggaggtgaatatcatg 2725
>gb|U39288.1|ATU39288 Arabidopsis thaliana ferredoxin-dependent glutamate synthase precursor (GLU2) mRNA, complete cds Length = 5430 Score = 109 bits (55), Expect = 1e-20 Identities = 169/207 (81%) Strand = Plus / Plus Query: 361 cctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggt 420 ||||| ||| |||| || ||||||||||| |||||||||| || || ||||| |||||| Sbjct: 3141 cctatccctgttgggaaggttgagcctgcttcctctatcgtggaacggttttgtacaggt 3200 Query: 421 ggaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaat 480 |||||||| | || || || || |||||||| ||||| | ||||| ||||||||||| Sbjct: 3201 ggaatgtctcttggagcaatctcaagagaaactcatgagacaattgctattgcaatgaac 3260 Query: 481 aggataggtggaaaatctaattcaggagaaggtggtgaggacccaatccgctggagtccc 540 || |||| |||||||| || ||||| ||||| || ||||| || |||||||||| || Sbjct: 3261 agattaggaggaaaatccaactcaggggaaggaggcgaggatccgatccgctggaagccg 3320 Query: 541 cttacagatgttgttgatggatattct 567 || ||||||||||||||||| |||||| Sbjct: 3321 ctaacagatgttgttgatgggtattct 3347 Score = 40.1 bits (20), Expect = 8.0 Identities = 71/88 (80%) Strand = Plus / Plus Query: 130 ttctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattcatc 189 |||||||||||||| || || || ||||| || || |||| || |||||||| ||||| Sbjct: 2910 ttctgggtgagggcattttctgaggatacagccaaacggctagagaacttcggtttcatt 2969 Query: 190 caatccagacctggaggtgaatttcatg 217 || | || ||||||||||||| ||||| Sbjct: 2970 cagtttaggcctggaggtgaatatcatg 2997
>dbj|AK100834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123D17, full insert sequence Length = 1836 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%), Gaps = 10/141 (7%) Strand = Plus / Plus Query: 189 ccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgca 248 ||||| |||||||||||| |||| || ||||||||||||||||||||||||||||| || Sbjct: 508 ccaatacagacctggaggcgaatatcgtgcaaataatcctgagatgtcaaagctgccgcg 567 Query: 249 caaagcaattcgtgaaaaaa------gtgataatgcatacaccatctaccaacaacatct 302 ||||||| ||| |||||||| ||||||||||||||||||| ||||| || | Sbjct: 568 caaagcagttcatgaaaaaaaaaaaggtgataatgcatacaccatgtaccagcatc---- 623 Query: 303 tgcaagccgtcctgtcaatgt 323 ||||| ||||||||||||||| Sbjct: 624 tgcaaaccgtcctgtcaatgt 644 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaatag 482 |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 665 gctatttccagataaacaaatgaagctattgcaattgcaatgaatag 711
>dbj|AK070225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042K21, full insert sequence Length = 3004 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%), Gaps = 10/141 (7%) Strand = Plus / Plus Query: 189 ccaatccagacctggaggtgaatttcatgcaaataatcctgagatgtcaaagctgctgca 248 ||||| |||||||||||| |||| || ||||||||||||||||||||||||||||| || Sbjct: 1111 ccaatacagacctggaggcgaatatcgtgcaaataatcctgagatgtcaaagctgccgcg 1170 Query: 249 caaagcaattcgtgaaaaaa------gtgataatgcatacaccatctaccaacaacatct 302 ||||||| ||| |||||||| ||||||||||||||||||| ||||| || | Sbjct: 1171 caaagcagttcatgaaaaaaaaaaaggtgataatgcatacaccatgtaccagcatc---- 1226 Query: 303 tgcaagccgtcctgtcaatgt 323 ||||| ||||||||||||||| Sbjct: 1227 tgcaaaccgtcctgtcaatgt 1247 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 519 ggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttcc 578 ||||||||||||||| ||||||||| ||||||||||||||| |||||| | | |||| | Sbjct: 1413 ggacccaatccgctgaagtccccttgcagatgttgttgatgagtattctccaatacttgc 1472 Query: 579 tcatctcaaa 588 |||||||||| Sbjct: 1473 tcatctcaaa 1482 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaatag 482 |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 1268 gctatttccagataaacaaatgaagctattgcaattgcaatgaatag 1314
>dbj|AP004474.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13B22, TM0009, complete sequence Length = 77319 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaataggataggtggaaaa 495 |||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 69479 gctatttcaagagaaactcatgaagcaattgcaatcgcaatgaatagattaggtggaaaa 69420 Query: 496 tctaattcaggagaaggtggtgagg 520 || ||||| || ||||||||||||| Sbjct: 69419 tcaaattctggggaaggtggtgagg 69395 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 204 aggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagc 254 |||||| ||||||||||||||||| || ||||||||| |||| |||||||| Sbjct: 69792 aggtgagtttcatgcaaataatccagaaatgtcaaagttgctccacaaagc 69742
>emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project) Length = 97451 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 38529 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 38588 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgagg 520 ||||||||||||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 38589 attgcaatgaataggattggtgggaaatcaaactctggagaaggtggagagg 38640 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 541 cttacagatgttgttgatggatattctgcgacacttcctcatctcaaaggt 591 ||||||||||| |||||||||||||| | ||||| || |||||||||||| Sbjct: 38748 cttacagatgtggttgatggatattcaccaacactaccacatctcaaaggt 38798
>gb|AC147961.3| Medicago truncatula chromosome 7 BAC clone mth2-39i23, complete sequence Length = 131165 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 |||||||| ||||| ||||| | || ||||| || || ||||| |||||||| |||||| Sbjct: 96254 ttttgcaccggtgggatgtctcttggagctatatctagggaaactcatgaagcaattgca 96195 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgagg 520 ||||||||||| || ||||||||||| || |||||||| ||||||||||||| Sbjct: 96194 attgcaatgaacagaataggtggaaagtcaaattcaggggaaggtggtgagg 96143 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 204 aggtgaatttcatgcaaataatcctgagatgtcaaagctgctgcacaaagc 254 |||||| | ||||||||| ||||| |||||||||||| |||| |||||||| Sbjct: 96544 aggtgagtatcatgcaaacaatccagagatgtcaaagttgcttcacaaagc 96494 Score = 48.1 bits (24), Expect = 0.033 Identities = 72/88 (81%) Strand = Plus / Minus Query: 2 gttactgtggagctcagatctttgaaatatatggtcttggccaagaagttgtcgaccttg 61 |||||||||| || ||||| |||||||| ||||| | || | |||||||| || |||| Sbjct: 98278 gttactgtggtgcacagatatttgaaatctatggattagggaaggaagttgtggatcttg 98219 Query: 62 cgttctgtgggagtgtatcgaaaattgg 89 | ||| | || ||||||||||||||||| Sbjct: 98218 cattcagcggaagtgtatcgaaaattgg 98191
>gb|AY189525.1| Arabidopsis thaliana ferredoxin-dependent glutamate synthase gene, complete cds Length = 8628 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| | || |||||||| ||||| || |||||||||||||| Sbjct: 5211 ttttgtactggtggaatgtcacttggtgctatttcaagagagactcatgaagctattgct 5270 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtgg 515 ||||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct: 5271 attgcaatgaataggattggtgggaaatcaaactctggagaaggtgg 5317 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 541 cttacagatgttgttgatggatattctgcgacacttcctcatctcaaaggt 591 ||||||||||| |||||||||||||| | ||||| || |||||||||||| Sbjct: 5429 cttacagatgtggttgatggatattcaccaacactaccacatctcaaaggt 5479
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%), Gaps = 10/115 (8%) Strand = Plus / Minus Query: 216 tgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtgaaaaaa------g 269 ||||||||||||||||||||||||||||| || ||||||| ||| |||||||| | Sbjct: 47222 tgcaaataatcctgagatgtcaaagctgccgcgcaaagcagttcatgaaaaaaaaaaagg 47163 Query: 270 tgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgtt 324 |||||||||||||||||| ||||| || | ||||| |||||||||||||||| Sbjct: 47162 tgataatgcatacaccatgtaccagcatc----tgcaaaccgtcctgtcaatgtt 47112 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 519 ggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttcc 578 ||||||||||||||| ||||||||| ||||||||||||||| |||||| | | |||| | Sbjct: 46865 ggacccaatccgctgaagtccccttgcagatgttgttgatgagtattctccaatacttgc 46806 Query: 579 tcatctcaaa 588 |||||||||| Sbjct: 46805 tcatctcaaa 46796 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaatag 482 |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 47010 gctatttccagataaacaaatgaagctattgcaattgcaatgaatag 46964
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%), Gaps = 10/115 (8%) Strand = Plus / Minus Query: 216 tgcaaataatcctgagatgtcaaagctgctgcacaaagcaattcgtgaaaaaa------g 269 ||||||||||||||||||||||||||||| || ||||||| ||| |||||||| | Sbjct: 138805 tgcaaataatcctgagatgtcaaagctgccgcgcaaagcagttcatgaaaaaaaaaaagg 138746 Query: 270 tgataatgcatacaccatctaccaacaacatcttgcaagccgtcctgtcaatgtt 324 |||||||||||||||||| ||||| || | ||||| |||||||||||||||| Sbjct: 138745 tgataatgcatacaccatgtaccagcatc----tgcaaaccgtcctgtcaatgtt 138695 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 519 ggacccaatccgctggagtccccttacagatgttgttgatggatattctgcgacacttcc 578 ||||||||||||||| ||||||||| ||||||||||||||| |||||| | | |||| | Sbjct: 138448 ggacccaatccgctgaagtccccttgcagatgttgttgatgagtattctccaatacttgc 138389 Query: 579 tcatctcaaa 588 |||||||||| Sbjct: 138388 tcatctcaaa 138379 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 436 gctatttccagagaaacccatgaagctattgcaattgcaatgaatag 482 |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 138593 gctatttccagataaacaaatgaagctattgcaattgcaatgaatag 138547
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 361 cctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggt 420 ||||| ||| |||| || ||||||||||| |||||||||| || || ||||| |||||| Sbjct: 87034 cctatccctgttgggaaggttgagcctgcttcctctatcgtggaacggttttgtacaggt 86975 Query: 421 ggaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaat 480 |||||||| | || || || || |||||||| ||||| | ||||| ||||||||||| Sbjct: 86974 ggaatgtctcttggagcaatctcaagagaaactcatgagacaattgctattgcaatgaac 86915 Query: 481 aggataggtggaaaatctaattcaggagaagg 512 || |||| |||||||| || ||||| ||||| Sbjct: 86914 agattaggaggaaaatccaactcaggggaagg 86883 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 526 atccgctggagtccccttacagatgttgttgatggatattct 567 |||||||||| || || ||||||||||||||||| |||||| Sbjct: 86786 atccgctggaagccgctaacagatgttgttgatgggtattct 86745
>gb|AC004261.3| Arabidopsis thaliana chromosome 2 clone T3K9 map CIC11C08, complete sequence Length = 91539 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 361 cctattcctattggcaaagttgagcctgcaacctctatcgttgagcgtttttgcacaggt 420 ||||| ||| |||| || ||||||||||| |||||||||| || || ||||| |||||| Sbjct: 866 cctatccctgttgggaaggttgagcctgcttcctctatcgtggaacggttttgtacaggt 807 Query: 421 ggaatgtccttgggcgctatttccagagaaacccatgaagctattgcaattgcaatgaat 480 |||||||| | || || || || |||||||| ||||| | ||||| ||||||||||| Sbjct: 806 ggaatgtctcttggagcaatctcaagagaaactcatgagacaattgctattgcaatgaac 747 Query: 481 aggataggtggaaaatctaattcaggagaagg 512 || |||| |||||||| || ||||| ||||| Sbjct: 746 agattaggaggaaaatccaactcaggggaagg 715 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 526 atccgctggagtccccttacagatgttgttgatggatattct 567 |||||||||| || || ||||||||||||||||| |||||| Sbjct: 618 atccgctggaagccgctaacagatgttgttgatgggtattct 577
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 475 atgaataggataggtggaaaatctaattcaggagaaggtggtgagga 521 |||||||| || ||||||||||| ||||| ||||||||||| ||||| Sbjct: 48204 atgaatagaattggtggaaaatcaaattcgggagaaggtggggagga 48158
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 485 taggtggaaaatctaattcaggagaaggtggtga 518 ||||||| ||||||||||| |||||||||||||| Sbjct: 26813 taggtggcaaatctaattctggagaaggtggtga 26846
>emb|Z21705.1|CHASGLTB Antithamnion sp. Chloroplast gltB and psaC genes encoding glutamate synthase and photosystem I protein Length = 5501 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 405 gcgtttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctat 464 ||||||||| || ||||||||||| || || ||| | || |||||||| |||||| || | Sbjct: 2983 gcgtttttgtactggtggaatgtcgttaggagctttatctagagaaactcatgaaacttt 3042 Query: 465 tgcaattgcaatgaataggataggtggaaaatctaattcaggagaaggtggtga 518 || ||| ||||||||| ||||| || ||||| || || || ||||||||||| Sbjct: 3043 agctattcgaatgaatagaataggaggtaaatcaaactctggtgaaggtggtga 3096
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 485 taggtggaaaatctaattcaggagaaggtggtga 518 ||||||| ||||||||||| |||||||||||||| Sbjct: 38567 taggtggcaaatctaattctggagaaggtggtga 38534
>ref|XM_369069.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00175.4) partial mRNA Length = 1575 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 ttggccaagaagttgtcgaccttg 61 |||||||||||||||||||||||| Sbjct: 236 ttggccaagaagttgtcgaccttg 213
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 48.1 bits (24), Expect = 0.033 Identities = 93/116 (80%) Strand = Plus / Minus Query: 409 ttttgcacaggtggaatgtccttgggcgctatttccagagaaacccatgaagctattgca 468 ||||| || ||||||||||| || || ||| | || |||||||| || ||| || | || Sbjct: 166779 ttttgtactggtggaatgtcattaggagctttatctagagaaacacacgaaactctagct 166720 Query: 469 attgcaatgaataggataggtggaaaatctaattcaggagaaggtggtgaggaccc 524 || ||||||||| | || || || ||||| ||||||||||||||||| || ||||| Sbjct: 166719 atcgcaatgaatcgtattggaggcaaatcaaattcaggagaaggtggagaagaccc 166664
>gb|DQ489494.1| Campylobacter jejuni subsp. jejuni 81-176 probable glutamate synthase (NADPH) large subunit (gltB) and probable glutamate synthase (NADPH) small subunit (gltD) genes, complete cds; and unknown gene Length = 7725 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 atgaataggataggtggaaaatctaattcaggagaaggtggtgagga 521 ||||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 2699 atgaataaaataggtgctaaatcaaattcaggtgaaggtggtgagga 2745
>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence Length = 61985 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 485 taggtggaaaatctaattcaggagaaggtgg 515 ||||||||||||||||| | ||||||||||| Sbjct: 32630 taggtggaaaatctaatactggagaaggtgg 32660
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 475 atgaataggataggtggaaaatctaattcaggagaaggtggtgagga 521 ||||||| ||||||| ||||| |||||||| |||||||||||||| Sbjct: 10802 atgaataaaataggtgctaaatcaaattcaggtgaaggtggtgagga 10848
>gb|AY278214.1| Securigera parviflora ferredoxin-dependent glutamate synthase (GGF) mRNA, partial cds Length = 842 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 130 ttctgggtgagggctttctcagaagataccgcgaagaggctggaaaacttcggattcatc 189 |||||||||| || ||||| ||||||||||| || || ||||||| || || || || Sbjct: 738 ttctgggtgaaagcgttctctgaagataccgcaaaaagattggaaaattttgggtttata 797 Query: 190 caatccagacctggaggtgaatttcatgcaaataatcc 227 || | ||||| |||||||| | ||||||||||||||| Sbjct: 798 cagtttagaccaggaggtgagtatcatgcaaataatcc 835
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 493 aaatctaattcaggagaaggtggtgaggacccaatccg 530 |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 2370025 aaatctaactcaggcgaaggtggtgaagaccctatccg 2370062
>ref|XM_657646.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5134.2), mRNA Length = 6435 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 485 taggtggaaaatctaattcaggagaaggtggtgaggaccca 525 |||||||||| ||||| | || |||||||||||||||||| Sbjct: 2879 taggtggaaagtctaacactggtgaaggtggtgaggaccca 2919
>emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on chromosome 9 Contains part of a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 161002 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 aggagaaggtggtgaggaccc 524 ||||||||||||||||||||| Sbjct: 16120 aggagaaggtggtgaggaccc 16140
>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2 Contains a NADH dehydrogenase 3, mitochondrial (MTND3) pseudogene, complete sequence Length = 157790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ctcagatctttgaaatatatg 34 ||||||||||||||||||||| Sbjct: 25946 ctcagatctttgaaatatatg 25966
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 aaagcaattcgtgaaaaaagtgat 273 ||||||||||||||||| |||||| Sbjct: 898078 aaagcaattcgtgaaaacagtgat 898101
>gb|AC006331.3| Homo sapiens BAC clone RP11-283B9 from 7, complete sequence Length = 6606 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atttcatgcaaataatcctg 229 |||||||||||||||||||| Sbjct: 249 atttcatgcaaataatcctg 268
>gb|AC108734.10| Homo sapiens 3 BAC RP11-259P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aaattggaggactcaccctt 102 |||||||||||||||||||| Sbjct: 103250 aaattggaggactcaccctt 103269
>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3 Contains the 3' end of a novel gene, a protein associated with PRK1 (AWP1) pseudogene, a novel gene (KIAA0375), a ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, a novel gene, a ribosomal protein S29 (RPS29) pseudogene and a CpG island, complete sequence Length = 153826 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 actgtggagctcagatcttt 24 |||||||||||||||||||| Sbjct: 65235 actgtggagctcagatcttt 65254
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 454 catgaagctattgcaattgcaatgaataggat 485 ||||||| | ||||||| |||||||||||||| Sbjct: 1021129 catgaagttcttgcaatagcaatgaataggat 1021160
>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 166549 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gagaaacccatgaagctatt 465 |||||||||||||||||||| Sbjct: 36255 gagaaacccatgaagctatt 36236
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aatttcatgcaaataatcct 228 |||||||||||||||||||| Sbjct: 34685 aatttcatgcaaataatcct 34704
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 485 taggtggaaaatctaattcaggagaaggtggtgaggaccc 524 |||||| ||||||||| | ||||| |||||||||||||| Sbjct: 1199279 taggtgcaaaatctaactgtggagagggtggtgaggaccc 1199318
>gb|AC161423.1| Mus musculus BAC clone RP23-291E12 from chromosome 16, complete sequence Length = 226870 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggattcatccaatccagacc 200 |||||||||||||||||||| Sbjct: 188332 ggattcatccaatccagacc 188351
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 accgcgaagaggctggaaaa 176 |||||||||||||||||||| Sbjct: 252604 accgcgaagaggctggaaaa 252585
>gb|AC098812.3| Papio anubis clone RP41-440G22, complete sequence Length = 171720 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atttcatgcaaataatcctg 229 |||||||||||||||||||| Sbjct: 89835 atttcatgcaaataatcctg 89854
>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence Length = 159371 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcagatctttgaaatatat 33 |||||||||||||||||||| Sbjct: 41832 ctcagatctttgaaatatat 41813
>ref|NM_209739.1| Eremothecium gossypii ADR290Wp (ADR290W), mRNA Length = 6588 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 485 taggtggaaaatctaattcaggagaaggtggtgaggaccc 524 |||||| ||||||||| | ||||| |||||||||||||| Sbjct: 3047 taggtgcaaaatctaactgtggagagggtggtgaggaccc 3086
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aatttcatgcaaataatcct 228 |||||||||||||||||||| Sbjct: 137288 aatttcatgcaaataatcct 137269
>gb|AC135118.3| Mus musculus BAC clone RP24-450N10 from 3, complete sequence Length = 188353 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ttccagagaaacccatgaag 460 |||||||||||||||||||| Sbjct: 130260 ttccagagaaacccatgaag 130279
>emb|AL844225.9| Mouse DNA sequence from clone RP23-119M24 on chromosome 2, complete sequence Length = 137220 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ccatgaagctattgcaattg 472 |||||||||||||||||||| Sbjct: 56438 ccatgaagctattgcaattg 56457
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gtgagggctttctcagaaga 155 |||||||||||||||||||| Sbjct: 141283 gtgagggctttctcagaaga 141264 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,655,944 Number of Sequences: 3902068 Number of extensions: 5655944 Number of successful extensions: 94549 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94251 Number of HSP's gapped (non-prelim): 285 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
