ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18n12 |
|---|---|
| Clone Library Name | barley_pub |
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 110 bits (274), Expect = 1e-24 Identities = 55/62 (88%), Positives = 59/62 (95%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FSEDL++FVGNLPFSVDSA LAGLFE+AG+VEMVEVIYDKLTGRSRGFGFVTMST EEVE Sbjct: 83 FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVE 142 Query: 392 EA 397 A Sbjct: 143 AA 144 Score = 62.0 bits (149), Expect = 3e-10 Identities = 30/57 (52%), Positives = 41/57 (71%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RV+VGNL + VD L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 107 bits (266), Expect = 9e-24 Identities = 53/62 (85%), Positives = 59/62 (95%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FSEDL++FVGNLPFSVDSA LAGLFE+AG+VE+VEVIYDKL+GRSRGFGFVTMST EEVE Sbjct: 84 FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVE 143 Query: 392 EA 397 A Sbjct: 144 AA 145 Score = 62.8 bits (151), Expect = 2e-10 Identities = 30/57 (52%), Positives = 41/57 (71%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RV+VGNL + VD L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 265
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 103 bits (257), Expect = 1e-22 Identities = 51/62 (82%), Positives = 57/62 (91%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FS DL++FVGNLPF+VDSAQLA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMS+V EVE Sbjct: 87 FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVE 146 Query: 392 EA 397 A Sbjct: 147 AA 148 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/57 (50%), Positives = 38/57 (66%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RV+VGNL + VD L LF + G V VIYD+ +GRS+GFGFVT + +EV+ A Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNA 261
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 102 bits (254), Expect = 2e-22 Identities = 51/62 (82%), Positives = 56/62 (90%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FS DL++FVGNLPFS DSA LA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE Sbjct: 83 FSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 142 Query: 392 EA 397 A Sbjct: 143 AA 144 Score = 63.9 bits (154), Expect = 9e-11 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 F RV+VGNL + VD L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV Sbjct: 184 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 243 Query: 392 EA 397 A Sbjct: 244 NA 245
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 99.8 bits (247), Expect = 1e-21 Identities = 50/62 (80%), Positives = 55/62 (88%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FS DL++FVGNL F+VDSAQLA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMST EVE Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154 Query: 392 EA 397 A Sbjct: 155 AA 156 Score = 62.4 bits (150), Expect = 3e-10 Identities = 29/57 (50%), Positives = 41/57 (71%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R++VGNL + VD L LF + G V VIYD+ +GRS+GFGFVT+S+ +EV++A Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 98.6 bits (244), Expect = 3e-21 Identities = 50/62 (80%), Positives = 55/62 (88%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 FS DL++FVGNL FS DSA LA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE Sbjct: 83 FSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 142 Query: 392 EA 397 A Sbjct: 143 AA 144 Score = 63.9 bits (154), Expect = 9e-11 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 F RV+VGNL + VD L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV Sbjct: 190 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 249 Query: 392 EA 397 A Sbjct: 250 NA 251
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 85.5 bits (210), Expect = 3e-17 Identities = 41/61 (67%), Positives = 51/61 (83%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SED ++FVGNLP+ +DS LA LF+QAG VE+ EVIY++ T RSRGFGFVTMSTVEE ++ Sbjct: 94 SEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADK 153 Query: 395 A 397 A Sbjct: 154 A 154 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/62 (46%), Positives = 43/62 (69%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 F R++VGN+P+ +D A+L +F + G V V++D+ +GRSRGFGFVTMS+ E+ Sbjct: 187 FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMS 246 Query: 392 EA 397 EA Sbjct: 247 EA 248
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 85.1 bits (209), Expect = 4e-17 Identities = 40/60 (66%), Positives = 51/60 (85%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E+ ++FVGNLP+ VDS +LAG+F+ AG VE+ EVIY++ T RSRGFGFVTMSTVEE E+A Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112 Score = 68.6 bits (166), Expect = 4e-12 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 F RV+VGNLP+ VD+++L LF + G V V+ D+ TGRSRGFGFVTMS+ EV Sbjct: 145 FEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVN 204 Query: 392 EA 397 +A Sbjct: 205 DA 206
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 84.7 bits (208), Expect = 5e-17 Identities = 42/60 (70%), Positives = 50/60 (83%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ED ++FVGNLP+ VDS LA LFEQAG VE+ EVIY++ T +SRGFGFVTMSTVEE E+A Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKA 193 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/62 (48%), Positives = 44/62 (70%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 F + R++VGN+P+ +D A+L LF + G V V+YD+ TGRSRGFGFVTM++ E+ Sbjct: 226 FEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMS 285 Query: 392 EA 397 +A Sbjct: 286 DA 287
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 77.8 bits (190), Expect = 6e-15 Identities = 38/61 (62%), Positives = 50/61 (81%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SE+ ++FVGNL + V+S LA LFEQAG+VE+ EVIY++ T +SRGFGFVTMS+V+E E Sbjct: 147 SEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAET 206 Query: 395 A 397 A Sbjct: 207 A 207 Score = 72.0 bits (175), Expect = 3e-13 Identities = 34/57 (59%), Positives = 43/57 (75%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RV+VGNLP+ VD+ +L LF + G V V+YD+ TGRSRGFGFVTMS V+E+ EA Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEA 301
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 76.3 bits (186), Expect = 2e-14 Identities = 34/57 (59%), Positives = 48/57 (84%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R++VGNLPFS+ S+QL+ +F +AG+V VE++YD++T RSRGF FVTM +VEE +EA Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEA 171 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/57 (38%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +++V NL +++ S L F +VIYD+ +GRSRGFGF+T S+ E + A Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSA 274
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 63.2 bits (152), Expect = 1e-10 Identities = 27/53 (50%), Positives = 43/53 (81%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 R++VGN+P ++++ +L + E+ G++E+ EV+YDK +GRSR FGFVTM TVE+ Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVED 137 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +V++GNL +V + L F + G V +V T +S GFGFV+ S+ EEVE A Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAA 241
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 54.7 bits (130), Expect = 5e-08 Identities = 23/58 (39%), Positives = 40/58 (68%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +R++VG+L F++ L G+FE G +E ++++ D TGRS+G+GF+T S E ++A Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKA 307
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 54.7 bits (130), Expect = 5e-08 Identities = 23/58 (39%), Positives = 40/58 (68%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +R++VG+L F++ L G+FE G +E ++++ D TGRS+G+GF+T S E ++A Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKA 307
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/57 (45%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ E A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/49 (48%), Positives = 32/49 (65%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 373 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMA 81
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 51.6 bits (122), Expect = 4e-07 Identities = 27/57 (47%), Positives = 35/57 (61%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 70 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 160
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 51.6 bits (122), Expect = 4e-07 Identities = 27/57 (47%), Positives = 35/57 (61%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 70 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 160
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 51.6 bits (122), Expect = 4e-07 Identities = 27/57 (47%), Positives = 35/57 (61%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 70 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 160
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 51.6 bits (122), Expect = 4e-07 Identities = 27/57 (47%), Positives = 35/57 (61%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 70 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 160
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 51.6 bits (122), Expect = 4e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 395 A 397 A Sbjct: 63 A 63
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 51.6 bits (122), Expect = 4e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 395 A 397 A Sbjct: 63 A 63
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 395 A 397 A Sbjct: 63 A 63
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 395 A 397 A Sbjct: 63 A 63
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 395 A 397 A Sbjct: 63 A 63
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 50.8 bits (120), Expect = 8e-07 Identities = 27/58 (46%), Positives = 36/58 (62%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +FVG LP S S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A Sbjct: 3 LTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRA 60 Score = 34.3 bits (77), Expect = 0.074 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 +E VF+ NL F + +L L +Q G ++ V ++ T S+G F T E ++ Sbjct: 331 NEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQK 390 Score = 32.3 bits (72), Expect = 0.28 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+ + NL F L +F Q G+V V I K G+ RGFGFV + E +A Sbjct: 114 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVN-IPRKPDGKMRGFGFVQFKNLLEAGKA 169
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 50.4 bits (119), Expect = 1e-06 Identities = 27/58 (46%), Positives = 36/58 (62%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +FVG LP S S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A Sbjct: 3 LTLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRA 60 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 +E VF+ NL F + L + +Q G ++ V V+ T S+G F T E ++ Sbjct: 321 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQK 380
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SE+ ++FVG L F+ D L F G + V V+ D+ T RSRGFGF+T + E + Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62 Query: 395 A 397 A Sbjct: 63 A 63
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/53 (39%), Positives = 36/53 (67%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 382 +R++VG+L F++ L G+FE G ++ + ++ D TGRS+G+GF+T S E Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 50.1 bits (118), Expect = 1e-06 Identities = 26/57 (45%), Positives = 35/57 (61%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVE+V+ A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAA 70 Score = 45.8 bits (107), Expect = 2e-05 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT V++ Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDK 160
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 50.1 bits (118), Expect = 1e-06 Identities = 23/54 (42%), Positives = 34/54 (62%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 + ++VGNL + V A L +F + GSV+ V++ D+ TGR RGFGFV + E Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAE 54
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +2 Query: 215 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 S D R VFVGNLP+ V+ + + F GS+ V ++ DK+TG +GFG+V + V Sbjct: 283 SRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVH 342 Query: 392 EA 397 A Sbjct: 343 LA 344 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMV 313 VFVGNLP + + +L F++ G +E V Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESV 214
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ A+L F Q G V ++I D+ TGRSRGFGFVT + +++A Sbjct: 5 EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDA 63
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ D L F Q G V ++I D+ TGRSRGFGFVT + +++A Sbjct: 7 EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDA 65
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +2 Query: 215 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 S D R VFVGNLP+ VD + L F GS+ V ++ + LTG RGFG+V + V Sbjct: 281 SRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 340 Query: 392 EA 397 A Sbjct: 341 LA 342 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMV 313 VFVGNLP + + +L F++ G VE V Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESV 212
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/61 (40%), Positives = 34/61 (55%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SE+ ++FVG L F+ D L F G + V V+ D+ T RSRGFGF+T + E Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASV 62 Query: 395 A 397 A Sbjct: 63 A 63
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/59 (40%), Positives = 35/59 (59%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ D L F Q G + ++I D+ TGRSRGFGFVT + +++A Sbjct: 7 EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDA 65
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D ++V NLP ++ QL +F + GS+ ++ DKLTGR RG FV + EE +EA Sbjct: 211 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 270
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D ++V NLP ++ QL +F + GS+ ++ DKLTGR RG FV + EE +EA Sbjct: 209 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 268
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGF 61
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGF 61
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/56 (41%), Positives = 35/56 (62%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EA Sbjct: 74 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEA 129
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/56 (41%), Positives = 35/56 (62%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EA Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEA 219
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/56 (41%), Positives = 35/56 (62%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EA Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEA 219
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ D L F Q G V ++I D+ TGRSRGFGFVT + +++A Sbjct: 7 EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/57 (45%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 182
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 48.1 bits (113), Expect = 5e-06 Identities = 22/56 (39%), Positives = 36/56 (64%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 R+FVG + F + + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ ++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQK 88
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 48.1 bits (113), Expect = 5e-06 Identities = 22/56 (39%), Positives = 36/56 (64%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 R+FVG + F + + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ ++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQK 88
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/57 (45%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 182
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/57 (45%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 92 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 182
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/55 (47%), Positives = 32/55 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVD 82 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE G +E +EV+ D+ +G+ RGF FVT + V++ Sbjct: 119 KIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 174
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 48.1 bits (113), Expect = 5e-06 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S++ ++F+G L F + L F + G + V V+ D+ T RSRGFGFVT V++ ++ Sbjct: 2 SDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKD 61 Query: 395 A 397 A Sbjct: 62 A 62
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/55 (47%), Positives = 32/55 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVD 82 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L E G +E +EV+ D+ +G+ RGF FVT + V++ Sbjct: 119 KIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 174
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 47.8 bits (112), Expect = 6e-06 Identities = 21/56 (37%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G +E E+I DK +G+ RGFGFVT + + V++ Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDK 156 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S + EV+ A Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAA 66
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 47.8 bits (112), Expect = 6e-06 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +2 Query: 215 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 S D R VFVGNLP+ ++ + L F GS+ V ++ + LTG RGFG+V + V Sbjct: 287 SRDKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 346 Query: 392 EA 397 A Sbjct: 347 LA 348 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMV 313 VFVGNLP + + +L F++ G VE V Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESV 218
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ + L F Q G + ++I D+ TGRSRGFGFVT + + +A Sbjct: 5 EYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDA 63
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/60 (36%), Positives = 36/60 (60%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D ++V NLP ++ +L +F + G++ ++ DKLTGR RG FV + EE +EA Sbjct: 186 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEA 245
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 47.0 bits (110), Expect = 1e-05 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ ++ L F G V +VI D+ TGRSRGFGFVT S+ + + +A Sbjct: 7 EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDA 65
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L +EQ G++ V+ D + RSRGFGFVT S + EV+ A Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAA 66 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G ++ +E+I DK +G+ RGF FVT + V++ Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDK 156
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK 156 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA 66
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/56 (37%), Positives = 35/56 (62%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 R+FVG + F + L F Q GSV+ V+++ D+ G S+G+GF+T T E+ ++ Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQK 88
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 46.6 bits (109), Expect = 1e-05 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ + L F G + +VI D+ TGRSRGFGFVT S+ + +A Sbjct: 7 EYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDA 65
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK 168 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA 78
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 46.6 bits (109), Expect = 1e-05 Identities = 24/61 (39%), Positives = 35/61 (57%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 +E VFVG L ++VD L FE+ G++ VI D +GRS+G+G+V T E + Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKA 319 Query: 395 A 397 A Sbjct: 320 A 320 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVGNL F+ L+ F G ++ + + D +GR +GFG+VT S ++ ++ Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D ++V NLP ++ QL +F + G + ++ DKLTG+ RG FV + EE +EA Sbjct: 194 KDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 253
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + + FEQ G VE +++DK T R RGFGFVT + VE+ Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVT 367 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVT 367 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVT 367 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ ++FVG +P + +L F++ G V V +IYD R RGFGF+T + V++ Sbjct: 110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169 Query: 395 A 397 A Sbjct: 170 A 170 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 ++FVG L +S L F Q G V ++ DK T +SRGFGFV Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFV 56
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ ++FVG +P + +L F++ G V V +IYD R RGFGF+T + V++ Sbjct: 110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169 Query: 395 A 397 A Sbjct: 170 A 170 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 ++FVG L +S L F Q G V ++ DK T +SRGFGFV Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFV 56
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 373 ++F+G L + D A L F G V +VI D+ TGRSRGFGFV + Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/60 (35%), Positives = 36/60 (60%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D ++V NLP ++ +L +F + G++ ++ DKLTG+ RG FV + EE +EA Sbjct: 169 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 228
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + + FEQ G VE +++DK T R RGFGFVT + VE+ Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDK 161 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L F L FEQ G++ V+ D + RSRGFGFVT + +EV+ A Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAA 71
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 45.8 bits (107), Expect = 2e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++FVG L V L F Q G+VE E+I DK +G+ RGFGFV + ++A Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/61 (39%), Positives = 34/61 (55%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ ++F+G L + L G FE G++ V+ + T RSR FGFVT S VEE + Sbjct: 4 SQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADA 63 Query: 395 A 397 A Sbjct: 64 A 64
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 45.8 bits (107), Expect = 2e-05 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E +FVG L +S+D L FE G V VIY++ T RSRG+G+V E+A Sbjct: 166 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKA 225 Score = 38.9 bits (89), Expect = 0.003 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+GNL F+ D + LF + G V V + T + +GFG+V S +E+ ++A Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 324
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 45.4 bits (106), Expect = 3e-05 Identities = 22/61 (36%), Positives = 33/61 (54%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S ++FVG +P + +L F + G V V +IYD R RGFGF+T + V++ Sbjct: 111 SRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 170 Query: 395 A 397 A Sbjct: 171 A 171 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 ++FVG L +S L F Q G V ++ DK T +SRGFGFV Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFV 56
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 +D ++FVG L + +L F + G +E + V D TGRSRGF F+ + E +++ Sbjct: 54 DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/56 (28%), Positives = 31/56 (55%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + ++ F Q G++ VE+ +DK + +GF F+T + + V + Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTD 192
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 45.4 bits (106), Expect = 3e-05 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 VFVGN+P+ V Q+ +F Q G V+ +++ D TG +G+GF Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGF 52
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/56 (37%), Positives = 35/56 (62%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVG +P + +L LFE+AG + + ++ D L+G++RG+ F+T E +EA Sbjct: 167 VFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEA 222
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + R FVG L ++ + L F Q G V ++I D+ +GRSRGFGFVT + + +A Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDA 63
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 45.1 bits (105), Expect = 4e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L + L FEQ G + V V+ D T RSRGFGF+T S V++A Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDA 74 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG + ++ L F+Q G+V ++ DK T + RGF FV + V++ Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDK 164
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 45.1 bits (105), Expect = 4e-05 Identities = 15/45 (33%), Positives = 30/45 (66%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 +F+G LP+ +D +L F + G +E + ++ DK+T +S+G+ F+ Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFI 153
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 44.3 bits (103), Expect = 7e-05 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++EA Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 88 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L D + F+ G++ + ++ DK TG+ RGF FV + V++ Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDK 178
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/55 (38%), Positives = 31/55 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 +VF+G LP +V L F + G V V ++YD+ +SRGFGF++ VE Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVE 151 Score = 35.4 bits (80), Expect = 0.033 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 373 ++FVG L + L+ F + G + V+ + +GRSRGFGFVT + Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFA 56
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ +L LF G VE ++I DK+ G S G+GFV T ++ E A Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/52 (42%), Positives = 30/52 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 +F+ NL D L +F G+V V+VI D T + +GFGFVTM+ EE Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEE 297 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D +++ LP ++ + +F + G + V+ D+ TG SRG F+ E EEA Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V+VGN+ +SV +L F GSV V ++ DK TG +GF ++ S V A Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 112
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 373 E R+F+ NLPF+ ++ FE G+V+ V + DK T S+G FV+ S Sbjct: 312 ESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFS 363 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + NLPF + LF G ++ V + K +RGFGFV STV E + A Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVR-LPKKFDNTTRGFGFVEYSTVREAQSA 775
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/57 (40%), Positives = 34/57 (59%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+ V N+PF L +FE+ G V VE+I+++ S+GFGFVTM ++ E A Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERA 208
>NOP12_CANGA (Q6FUS6) Nucleolar protein 12| Length = 396 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVGNL F D L F GS+E V ++ D T +GF +V + ++ V +A Sbjct: 230 VFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKA 285
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ +L LF G VE ++I DK+ G S G+GFV T ++ E A Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Score = 41.2 bits (95), Expect = 6e-04 Identities = 23/56 (41%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL D L +F G+V V+VI D T + +GFGFVTM+ EE A Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMA 301 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +D +++ LP ++ + +F + G + V+ D+ TG SRG F+ E EEA Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/55 (38%), Positives = 36/55 (65%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ G F + GSV+ V++I D+ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>DAZ1_CAEEL (Q20870) DAZ protein 1| Length = 499 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/56 (37%), Positives = 35/56 (62%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 R+FVG P S +L FE+ +V+ V+++ L G+S+G+GF+T T ++ EE Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEE 122
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 347 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +2 Query: 218 EDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 E+LR +FVG L + + + Q G + + V+ D T RSRGFGFVT S EV+ Sbjct: 20 ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDA 79 Query: 395 A 397 A Sbjct: 80 A 80 Score = 37.0 bits (84), Expect = 0.011 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 R++V + L F + G+V E+I DK T + RGFGFVT + V++ Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 42.7 bits (99), Expect = 2e-04 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 341 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ ++ LF Q G + ++ D+ TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEA 182 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ + LF G +E +++ DK+TG+S G+GFV S + ++A Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 42.7 bits (99), Expect = 2e-04 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 341 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ ++ LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 182 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ + LF G +E +++ DK+TG+S G+GFV S + ++A Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 131 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 189 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 354 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 136 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 194 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 359 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/55 (38%), Positives = 37/55 (67%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + ++ A++ FEQ G+V+ V++I D+ TG S+G+GFV+ +V++ Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQK 91
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 93 EEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 151 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/51 (35%), Positives = 31/51 (60%) Frame = +2 Query: 245 LPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV L + S +L FEQAG V +++ DK++GRS+G +V + V+ A Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAA 297
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/55 (36%), Positives = 33/55 (60%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 ++FVG + V + F Q G++ +++ DK TG+SRGFGFVT + + V+ Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVD 298 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 E ++F+G L + L F + G+V ++++ D TGRSRGFGF++ V+E Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 182 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 334
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/61 (34%), Positives = 37/61 (60%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S +++FVG++P + ++ FEQ G+V V +I DK TG+ +G FV +T ++ + Sbjct: 117 SSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADR 176 Query: 395 A 397 A Sbjct: 177 A 177
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++A Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKA 255 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRA 161
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/56 (37%), Positives = 33/56 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++VG+L F+V +QL F Q G+V V V D +T RS G+G+V + ++ A Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 93 Score = 35.8 bits (81), Expect = 0.025 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++V NL S+ +L +F G+V +V+ D G S+G GFV +T EE EA Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEA 374 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D L F G++ +V D +G+S+G+GFV + E ++A Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKA 180 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V+V NL S L F + G + V+ D G+S+GFGFV ++ A Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARA 271
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++FVG L + D L F Q G+V V+++ DK TG+ RGF FV + V++A Sbjct: 124 KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180 Score = 35.4 bits (80), Expect = 0.033 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L L + Q G V V V+ D T RSRGFGF+T + V+ A Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRA 89
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 42.0 bits (97), Expect = 4e-04 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV + + +L +F + G+V V ++ + +T SRGFGF++ STVEE A Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSA 158
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSR----GFGFVTMSTVE 382 ++D RVFVG L S +++ LFE G+V V + + ++ +R G FVT + E Sbjct: 41 ADDFRVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQE 100 Query: 383 EVEEA 397 +V++A Sbjct: 101 DVDKA 105
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 R+FVG + A L +F G+V+ ++I D+ G S+G+GFVT T +E + Sbjct: 34 RIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQ 87
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEV 388 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESV 225
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEV 388 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESV 225
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 +FVG LP+ + + +F Q G + + ++ DK TG+S+GF F+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + +FVG+L +VD L F+ S V++D TG SRG+GFV+ ++ ++ + A Sbjct: 159 DTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNA 218
>NOP12_YEAST (Q08208) Nucleolar protein 12| Length = 459 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGNL F L FE G +E V +I D T +GF +V ++ V +A Sbjct: 281 IFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKA 336
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEV 388 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESV 221
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 +++ NLP S+D +L G+ + G V ++ D +G SRG GF M + E+ E Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCE 191
>NOP12_KLULA (Q6CKV6) Nucleolar protein 12| Length = 524 Score = 40.8 bits (94), Expect = 8e-04 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVGNL F L FE G +E V +I D T +GF +V + V +A Sbjct: 361 VFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKA 416
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++D V+VG L V L LF QAG V + D++TG+ +G+GFV + E+ + Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69 Query: 395 A 397 A Sbjct: 70 A 70
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 +++ NLP S+D +L G+ + G V ++ D +G SRG GF M + E+ E Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCE 189
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 40.8 bits (94), Expect = 8e-04 Identities = 21/57 (36%), Positives = 32/57 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++ A Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L D L F+ G + V ++ DK TG+ RGF F+ + V++ Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDK 171
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L +F G+ V+V+ D TGRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKA 247 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Score = 33.9 bits (76), Expect = 0.096 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NL S+D+ L F G++ +V+ D+ SRG+GFV T E A Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRA 154
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/55 (36%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQK 95
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 40.4 bits (93), Expect = 0.001 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGNL F A L F Q G + V ++ + TG+ +GFGFV ++ +A Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKA 285
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 40.4 bits (93), Expect = 0.001 Identities = 23/60 (38%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + +FV NL SVD +L F G++ +V+ + G+S+GFGFV ST EE +A Sbjct: 319 QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKA 377 Score = 35.4 bits (80), Expect = 0.033 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++VG+L SV A L +F GSV + V D +T S G+ +V + E +A Sbjct: 39 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKA 94 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL +D+ L F G + ++ D+ G+S+GFGFV +EA Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEA 181
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 40.4 bits (93), Expect = 0.001 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + +F+ NL VD +L F G++ +++ D+ G+S+GFGFV +T EE +A Sbjct: 362 QGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKA 420
>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12| Length = 509 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVG L F L F G VE V ++ D T +GF +V V VE+A Sbjct: 276 VFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQA 331
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 + + +F+G LP+ + + +F Q G + + ++ DK TG+S+GF F+ Sbjct: 32 YKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 40.0 bits (92), Expect = 0.001 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +F + G + V V+YD+ TGRSRGF FV +++ +EA Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA 174
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 40.0 bits (92), Expect = 0.001 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +F + G + V V+YD+ TGRSRGF FV +++ +EA Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA 176
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGN+ V Q+ F+ G ++ + ++YD+ TG +G+G++ + E+A Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKA 121
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVG+L +V +QL LF + S ++++D++TG S+G+GFV + +E + A Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLA 221
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E Sbjct: 111 SNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 170 Query: 395 A 397 A Sbjct: 171 A 171
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+F+ N+ + LF Q G++E V + D TG+S+GF +V E+ A Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRA 367 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + NLPF L LF G ++ V V K +RGF FV + ++E E A Sbjct: 718 KIIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDQSARGFAFVEFNLMKEAETA 773
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/45 (44%), Positives = 27/45 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 ++VG+LP + QL FEQ G V + V K TG S+G+GFV Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFV 91
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 ED VFV N+P+ LA F + GSV+ + DK TG ++G FV Sbjct: 288 EDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFV 336 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV ++P V QLA F ++ V+ D RSRGFGFV+ + ++ +EA Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDT-NKRSRGFGFVSFAVEDDTKEA 82
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 39.7 bits (91), Expect = 0.002 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L +F G+ V+V+ D +GRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKA 247 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Score = 33.9 bits (76), Expect = 0.096 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NL S+D+ L F G + +V+ D+ SRG+GFV T E A Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEY--GSRGYGFVHFETQEAANRA 154
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E Sbjct: 94 SNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 153 Query: 395 A 397 A Sbjct: 154 A 154
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L +F G+ V+V+ D +GRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKA 247 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Score = 33.5 bits (75), Expect = 0.13 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NL S+D+ L F G++ +V+ D+ SRG+GFV T E A Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRA 154
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 +++ NLP S+D +L + + G V V+ D +G SRG GF M + E+ E Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCE 195
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/56 (35%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++V N+ +V +L F Q G++ +++ D+ G+S+GFGFV ST EE +A Sbjct: 306 IYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDE-KGKSKGFGFVCFSTPEEAIDA 360 Score = 35.4 bits (80), Expect = 0.033 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 VFV NLP SV +A L +F++ G++ +V + G+SRG+GFV Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLE-DGKSRGYGFV 157
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 39.3 bits (90), Expect = 0.002 Identities = 16/46 (34%), Positives = 29/46 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVT 367 +FVG + S+ +L+ LF + G + +++IYDK G G+GF++ Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFIS 242
>NOP12_SCHPO (O13741) Nucleolar protein 12| Length = 438 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVGNL F + L F GS++ V ++ D T +GF ++ V++A Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKA 327
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 124 Score = 33.9 bits (76), Expect = 0.096 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 227 RVFVGNL-PFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L P S ++ F + G +E +E+ D + RGF F+T E V++ Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 209
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 +++ NLP S+D +L + + G V ++ D +G SRG GF M + E+ E Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCE 195
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131 Score = 33.9 bits (76), Expect = 0.096 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L ++ F Q G +E +E+ D + RGF F+T + V++ Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 38.9 bits (89), Expect = 0.003 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 R+FV NLP+ + L +F + G +E + V +D + S+GF +V Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYV 347 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + NLPF + LF G + V V K +RGFGF + E E A Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENA 758
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/61 (32%), Positives = 33/61 (54%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SED +V+VGNLP V ++ +F + G ++ V++ +GR F FV + E+ Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61 Query: 395 A 397 A Sbjct: 62 A 62
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + +++ NL ++D +L F GS+ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKA 349 Score = 37.7 bits (86), Expect = 0.007 Identities = 22/60 (36%), Positives = 31/60 (51%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N VD L LF Q G V+V+ D G+S+GFGFV+ E+ +A Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247 Score = 32.3 bits (72), Expect = 0.28 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NL S+D+ L F G++ +V+ D+ S+G+ FV T E ++A Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKA 154
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + Sbjct: 114 SQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADR 171 Query: 395 A 397 A Sbjct: 172 A 172
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + Sbjct: 113 SQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADR 170 Query: 395 A 397 A Sbjct: 171 A 171
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 38.9 bits (89), Expect = 0.003 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ +++ NL SVD +L +F + G+V +V+ + G SRGFGFV S EE Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALR 387 Query: 395 A 397 A Sbjct: 388 A 388 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V D +TGRS+G+GFV E + A Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAA 192
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 38.5 bits (88), Expect = 0.004 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++D ++VG L V + L L QAG V V + D++T +GFGFV E+ + Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69 Query: 395 A 397 A Sbjct: 70 A 70 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMV-EVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGNL VD L F G + V +++ D +G S+GF F+ ++ E + A Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A Sbjct: 104 DHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 38.5 bits (88), Expect = 0.004 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFE-QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + +FVG+L + A L LF+ + SV+ V V+ D LTG SR FGFV +E A Sbjct: 191 EFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRA 250
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 +E R+FV NLP++ L LF + G + + D LT + +GF F+T E + Sbjct: 399 AESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVK 458 Query: 395 A 397 A Sbjct: 459 A 459 Score = 35.8 bits (81), Expect = 0.025 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEA 397 ++ V N+PF S ++ LF G ++ V + TG RGFGFV T ++ + A Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 890
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/56 (28%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V++G++P+ Q+ L G V +++++D TGRS+G+ F+ +E A Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASA 75
>RAVR1_RAT (Q5XI28) Protein raver-1| Length = 748 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 D + V NLP S+ AQ L GS+E ++Y + TG S+G+GF Sbjct: 131 DALLCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGF 177
>RAVR1_MOUSE (Q9CW46) Protein raver-1| Length = 748 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 D + V NLP S+ AQ L GS+E ++Y + TG S+G+GF Sbjct: 131 DALLCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGF 177
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++++G L D L F V V+ +K+TGRSRG+GFV + + A Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSA 88
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +2 Query: 236 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V NLP ++ +L LF + G V + + DK+TG +GF FVT + ++ A Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQA 289 Score = 36.2 bits (82), Expect = 0.019 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+ Sbjct: 520 SKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFDSPESAEK 577 Query: 395 A 397 A Sbjct: 578 A 578 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKA 157
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 372 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 425 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A Sbjct: 204 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAVQA 258 Score = 31.2 bits (69), Expect = 0.62 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 652 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME--NGKSKGCGVVKFESPEVAERA 706
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A Sbjct: 226 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQA 280 Score = 37.0 bits (84), Expect = 0.011 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 S+ ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+ Sbjct: 511 SKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFESAESAEK 568 Query: 395 A 397 A Sbjct: 569 A 569 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A Sbjct: 92 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKA 148
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 38.1 bits (87), Expect = 0.005 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F GS+ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 35.8 bits (81), Expect = 0.025 Identities = 21/60 (35%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L F Q G+ V+V+ D G+SRGFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKA 247 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 38.1 bits (87), Expect = 0.005 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +2 Query: 236 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VGNL F + L F + V + ++ D LT RSRGFG+V T + + A Sbjct: 98 VGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRGFGYVEFETADTLSAA 149
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/55 (34%), Positives = 35/55 (63%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 VFVG + +D ++ F + GSV+ V++I ++ TG S+G+GFV+ +V++ Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = +2 Query: 233 FVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +VGNLPF+ + +F+ S+ V ++ DK T + +GF +V V+ ++EA Sbjct: 44 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEA 97
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = +2 Query: 233 FVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +VGNLPF+ + +F+ S+ V ++ DK T + +GF +V V+ ++EA Sbjct: 44 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEA 97
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 294 VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV NL S+++ L G++ V+ D+ S+G+GFV T E E A Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERA 154
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + A Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRA 176
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 37.7 bits (86), Expect = 0.007 Identities = 22/56 (39%), Positives = 32/56 (57%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NLP+S++ L +F++ G V +V D G SRGFG V T +E+ A Sbjct: 221 VFIINLPYSMNWQSLKDMFKECGHVLRADVELD-FNGFSRGFGSVIYPTEDEMIRA 275
>RAVR2_HUMAN (Q9HCJ3) Protein raver-2| Length = 691 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 D + + N+P S S + L G++E ++Y ++TG S+G+GFV Sbjct: 141 DALLCITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFV 188
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/57 (28%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L + L +F + G + + ++ D+ T +SRGF FVT+ + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDA 65
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 37.4 bits (85), Expect = 0.009 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V+V N D +L FE G + +V+ K G+S+GFGFV T E E A Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAA 239 Score = 37.0 bits (84), Expect = 0.011 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++VG+LP V+ + L F AG V + V D +T RS G+ +V + E A Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERA 59 Score = 35.0 bits (79), Expect = 0.043 Identities = 18/54 (33%), Positives = 31/54 (57%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 + ++V NL ++D +L F G++ +V+ D+ GRS+GFGFV + E Sbjct: 287 VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASE 339 Score = 32.0 bits (71), Expect = 0.37 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 382 VF+ NL ++D+ + F G++ +V D+ G S+G+GFV T E Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEE 141
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L F G V ++I D+ T RSRGFGFVT ST E + A Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSA 44
>NOP12_ASHGO (Q75BJ7) Nucleolar protein 12| Length = 426 Score = 37.4 bits (85), Expect = 0.009 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VFVGNL F L F G +E V ++ D T +GF +V + + V +A Sbjct: 261 VFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKA 316
>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 473 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMST 376 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T Sbjct: 72 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLET 120
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 37.0 bits (84), Expect = 0.011 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++F+G L + L +F + G + V ++ D+ T +SRGF FVT + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 476 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMST 376 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T Sbjct: 75 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLET 123
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 37.0 bits (84), Expect = 0.011 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+F+ N+ +S LF G ++ V V D TG S+GF +V + EE +A Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQA 382
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +F + G + V ++YD+ + RSRGF FV V++ +EA Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +F + G + V ++YD+ + RSRGF FV V++ +EA Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 272 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 L +F + G + V ++YD+ + RSRGF FV V++ +EA Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175
>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 471 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMST 376 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T Sbjct: 70 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLET 118
>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO| protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit) Length = 471 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/55 (36%), Positives = 30/55 (54%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMST 376 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T Sbjct: 70 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLET 118
>RAVR1_HUMAN (Q8IY67) Protein raver-1| Length = 606 Score = 37.0 bits (84), Expect = 0.011 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 361 D + V NLP S+ Q L GS+E ++Y + TG+S+G+GF Sbjct: 131 DALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGF 177
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNA 112
>YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 intergenic| region Length = 659 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+GNL +V L +F++ S E +V D LT +S G+G++ + E A Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESA 168
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNA 112
>RAVR2_MOUSE (Q7TPD6) Protein raver-2| Length = 673 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 D + + NLP S + L G++E ++Y ++TG S+G+GFV Sbjct: 130 DALLCITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFV 177
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 VF+ NL S+D+ L F G++ +V D + GRS+G+GFV E + A Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAA 188 Score = 35.4 bits (80), Expect = 0.033 Identities = 20/52 (38%), Positives = 31/52 (59%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 +++ NL SV+ +L +F + G+V +V+ + G SRGFGFV S EE Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEE 380
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 36.2 bits (82), Expect = 0.019 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+FVGNL V+ L F + S+ +V+ D+ G++RGFGFV+ ++ +A Sbjct: 31 RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDR-EGKTRGFGFVSFKDSDQFLKA 86
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 36.2 bits (82), Expect = 0.019 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 382 + V LP+ L F G V MV+V D TG S+GFGFV + E Sbjct: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156
>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein| 11) Length = 281 Score = 36.2 bits (82), Expect = 0.019 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D VFVGNL V L LF QAG + V + D+ G+ + FGFV E V A Sbjct: 9 DRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDR-EGKPKSFGFVCFKHPESVSYA 66
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 36.2 bits (82), Expect = 0.019 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+G+L +V L G+F++ S +V D +T +S G G++ EE E+A Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKA 148
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 36.2 bits (82), Expect = 0.019 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 + + ++FVGNLP +D +L F G+V + + + G+ FGFV E V+ Sbjct: 327 YPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 36.2 bits (82), Expect = 0.019 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 212 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 + + ++FVGNLP +D +L F G+V + + + G+ FGFV E V+ Sbjct: 327 YPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 36.2 bits (82), Expect = 0.019 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Score = 35.0 bits (79), Expect = 0.043 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERA 154 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 E V++ N ++ +L +F + G V+V+ D G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKA 247
>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2| Length = 218 Score = 36.2 bits (82), Expect = 0.019 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 ++VGNL F QL LF + GS+E + + D+ GF F+ T +E Sbjct: 48 IYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQE 99
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 35.8 bits (81), Expect = 0.025 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 382 + V LP+ L F G V MV+V D TG S+GFGFV + E Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 35.8 bits (81), Expect = 0.025 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+FV NL + ++L +F G +E + V +D S+GF +V + + EA Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEA 352 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + NLPF + LF G + V V K +RGFGF + E E A Sbjct: 698 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENA 753
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++F+GNLP VD ++L F+ G+V + + G+ FGFV E V++ Sbjct: 339 QLFIGNLPHEVDKSELKDFFQNFGNVVELRI---NSGGKLPNFGFVVFDDSEPVQK 391
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 35.8 bits (81), Expect = 0.025 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = +2 Query: 221 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 D ++ + NLPF + LF GS++ V V K SRGF F + +E E A Sbjct: 702 DSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHA 759 Score = 30.8 bits (68), Expect = 0.81 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 382 R+F+ NL ++ LF Q G +E V + + TG+ +GF V E Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPE 353
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + V NL L LF GS+ + + DK TG+S+GF F++ E+ A Sbjct: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +2 Query: 218 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ + V NL L LF GS+ + + DK TG+S+GF F++ E+ A Sbjct: 237 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARA 296
>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP| core protein C) (Fragment) Length = 158 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ Sbjct: 35 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 90
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+F+ N+ + LF G +E V V D TG+S+GF +V E A Sbjct: 302 RLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANA 358 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGS--VEMVEVIYDKLTG---RSRGFGFVTMSTVEE 385 +FV NL FS SAQLA F+ V V+ D S GFGF+ T E+ Sbjct: 614 IFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQ 670
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++F+GNLP VD ++L F+ G+V + + G+ FGFV E V++ Sbjct: 341 QLFIGNLPHEVDKSELKDFFQSYGNVVELRI---NSGGKLPNFGFVVFDDSEPVQK 393
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 35.4 bits (80), Expect = 0.033 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEA 397 ++ V N+PF + ++ LF G ++ V + TG RGFGFV T ++ ++A Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 882 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+FV NL ++ L LF G + + D LT + +GF FVT E +A Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 457
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 +++G++P S+ QL F Q G+V + + K TG S+G+ +V Sbjct: 43 IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYV 87
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 35.4 bits (80), Expect = 0.033 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 SE L +F+GNL + + +L + S + + I D G S+ FG+V S+ EEVE+ Sbjct: 229 SEGLSIFIGNLNSTKEFDELKDALREFFSKKNL-TIQDIRIGNSKKFGYVDFSSEEEVEK 287 Query: 395 A 397 A Sbjct: 288 A 288 Score = 33.1 bits (74), Expect = 0.16 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV L L F+ GSV ++ D+ TG S+GFGFV ST E+ + A Sbjct: 504 LFVRGLSEDTTEETLKEAFD--GSVN-ARIVTDRDTGASKGFGFVDFSTAEDAKAA 556 Score = 33.1 bits (74), Expect = 0.16 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +2 Query: 236 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 V NL +S L +FE+A S+ + + GR++GF F+ S+ E+ ++A Sbjct: 418 VNNLSYSATEDSLREVFEKATSIRIPQN-----QGRAKGFAFIEFSSAEDAKDA 466 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV N+P+S +L +FE A + I G ++G +V S +E +A Sbjct: 326 LFVKNIPYSTTVEELQEIFENAKDIR----IPTGKDGSNKGIAYVEFSNEDEANKA 377
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 35.4 bits (80), Expect = 0.033 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +2 Query: 224 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +++FVGNL + + ++ LF Q G + +++ + FGFV M + E +EA Sbjct: 2 VKIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEA 51 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 ++ VGN+ S + +L FE+ G V +++ D + FV M VE+ EA Sbjct: 79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEA 127
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 35.4 bits (80), Expect = 0.033 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 V+V +LP +D Q+ F Q G+V + K TG S+G+ FV Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFV 91
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/56 (26%), Positives = 31/56 (55%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++F+G L + L +F + G + + ++ D+ T +SRGF FVT + + ++ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD 64
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 35.0 bits (79), Expect = 0.043 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNA 112
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 35.0 bits (79), Expect = 0.043 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 227 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 R+F+ N+ ++ LF G +E V + D TG+S+GF +V + A Sbjct: 331 RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATA 387
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +2 Query: 236 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVT 367 V NL +L LF + G ++ V + DK TGR++GF FV+ Sbjct: 206 VTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVS 249
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 34.7 bits (78), Expect = 0.056 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEE 385 S ++V L S +A L LF + G V +V+ + + +R +GFVTMST +E Sbjct: 448 SSGRNLWVSGLSSSTRAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDE 504
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNA 112
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGNL VD L F G + + GRS+G+GFV+ + E + A Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAA 156 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +2 Query: 215 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 394 ++D +++GNL V + L L QAG V + + D++ GFGF ++VE Sbjct: 8 NQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEY 67 Query: 395 A 397 A Sbjct: 68 A 68
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 34.3 bits (77), Expect = 0.074 Identities = 13/56 (23%), Positives = 30/56 (53%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FV + + ++L FE G ++ + ++Y+K +G+ RG+ F+ ++ A Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSA 160
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 34.3 bits (77), Expect = 0.074 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 397 +FVGNL + L F Q G V ++I + G RG G V + ++V+ A Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRA 191 Score = 33.9 bits (76), Expect = 0.096 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 391 ++ NLPFS + L LFE G V E+ YD G G V V++ + Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDS-KGAPTGIAVVEYDNVDDAD 405
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 34.3 bits (77), Expect = 0.074 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = +2 Query: 230 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 364 +++G++P ++ QL F Q G+V + + K TG S+G+ +V Sbjct: 43 IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYV 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,812,371 Number of Sequences: 219361 Number of extensions: 493588 Number of successful extensions: 2630 Number of sequences better than 10.0: 362 Number of HSP's better than 10.0 without gapping: 2271 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2584 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
