ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal19c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 484 e-133
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133
3dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
4dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 2e-98
5ref|NM_190417.1| Oryza sativa (japonica cultivar-group), predic... 335 9e-89
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 335 9e-89
7dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 335 9e-89
8dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 9e-89
9gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence 216 6e-53
10ref|XM_959480.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.46
11ref|XM_330602.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.46
12gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosom... 44 0.46
13emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid con... 44 0.46
14gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, c... 42 1.8
15gb|AY049011.1| Mus musculus melanin-concentrating hormone recept... 42 1.8
16gb|AY293839.1| Canavalia bonariensis small subunit ribosomal RNA... 42 1.8
17gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.3
18gb|BC104459.1| Homo sapiens testis/prostate/placenta-expressed p... 40 7.3
19gb|BC104458.1| Homo sapiens testis/prostate/placenta-expressed p... 40 7.3
20gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from... 40 7.3
21ref|NM_199456.1| Homo sapiens testis/prostate/placenta-expressed... 40 7.3
22ref|NM_199046.1| Homo sapiens testis/prostate/placenta-expressed... 40 7.3
23gb|AY216323.1| Inula britannica tRNA-Ala (trnA) gene, partial se... 40 7.3
24gb|AY363223.1| Homo sapiens testis/prostate/placenta-expressed p... 40 7.3
25gb|AY363222.1| Homo sapiens testis/prostate/placenta-expressed p... 40 7.3
26gb|AC149585.7| Mus musculus BAC clone RP24-316M20 from chromosom... 40 7.3
27emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chr... 40 7.3
28emb|X71659.1|RSBLNBAA R.sphaeroides genes glnA and glnB 40 7.3
29emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.3
30gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, comp... 40 7.3
31gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.3
32gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y... 40 7.3
33gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.3
34gb|AC010543.9| Homo sapiens chromosome 16 clone RP11-440K14, com... 40 7.3
35tpg|BK001513.1| TPA: TPA_exp: Sus scrofa Tepp (Tepp) mRNA, compl... 40 7.3
36gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome... 40 7.3
37gb|AF032116.1|AF032116 Rhodobacter sphaeroides PII protein (glnB... 40 7.3
38gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, comple... 40 7.3

>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score =  484 bits (244), Expect = e-133
 Identities = 434/496 (87%), Gaps = 1/496 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 62
             |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 43027 ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 42969

                                                                         
Query: 63    cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 122
              |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 42968 tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 42909

                                                                         
Query: 123   tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 182
             | | || || |||||||| || ||  |||||||||||||||||||||| || || |||||
Sbjct: 42908 tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 42849

                                                                         
Query: 183   ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 242
             |||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 42848 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 42789

                                                                         
Query: 243   catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 302
             | | ||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 42788 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 42729

                                                                         
Query: 303   ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 362
             |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || ||
Sbjct: 42728 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 42669

                                                                         
Query: 363   aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 422
             ||||||||||||||| |||||||| || |||||  |||  ||||| || ||||| |||||
Sbjct: 42668 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 42609

                                                                         
Query: 423   cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 482
             ||||||||| ||||||||||||||||| || || || || || || ||||||||||||||
Sbjct: 42608 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 42549

                             
Query: 483   ggtgatggaaggtgac 498
             ||||||||||||||||
Sbjct: 42548 ggtgatggaaggtgac 42533



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  484 bits (244), Expect = e-133
 Identities = 434/496 (87%), Gaps = 1/496 (0%)
 Strand = Plus / Minus

                                                                            
Query: 3        ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 62
                |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 23111252 ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 23111194

                                                                            
Query: 63       cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 122
                 |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 23111193 tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 23111134

                                                                            
Query: 123      tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 182
                | | || || |||||||| || ||  |||||||||||||||||||||| || || |||||
Sbjct: 23111133 tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 23111074

                                                                            
Query: 183      ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 242
                |||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 23111073 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 23111014

                                                                            
Query: 243      catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 302
                | | ||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 23111013 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 23110954

                                                                            
Query: 303      ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 362
                |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || ||
Sbjct: 23110953 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 23110894

                                                                            
Query: 363      aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 422
                ||||||||||||||| |||||||| || |||||  |||  ||||| || ||||| |||||
Sbjct: 23110893 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 23110834

                                                                            
Query: 423      cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 482
                ||||||||| ||||||||||||||||| || || || || || || ||||||||||||||
Sbjct: 23110833 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 23110774

                                
Query: 483      ggtgatggaaggtgac 498
                ||||||||||||||||
Sbjct: 23110773 ggtgatggaaggtgac 23110758



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>dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054N12, full
            insert sequence
          Length = 2314

 Score =  484 bits (244), Expect = e-133
 Identities = 434/496 (87%), Gaps = 1/496 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    ttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattcccag 62
            |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 865  ttcgacatcgcccgctgg-atcccggccttcaacatggtgttccgtattctgattcccag 923

                                                                        
Query: 63   cgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcctt 122
             |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 924  tgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctt 983

                                                                        
Query: 123  tatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttcttc 182
            | | || || |||||||| || ||  |||||||||||||||||||||| || || |||||
Sbjct: 984  tgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttc 1043

                                                                        
Query: 183  ctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggga 242
            |||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1044 ctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcggga 1103

                                                                        
Query: 243  catcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcaga 302
            | | ||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 1104 ccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcaga 1163

                                                                        
Query: 303  ggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgga 362
            |||| | || ||| ||||||||||||| || || |||||||| ||||||||||| || ||
Sbjct: 1164 ggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttaga 1223

                                                                        
Query: 363  aaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacaccccat 422
            ||||||||||||||| |||||||| || |||||  |||  ||||| || ||||| |||||
Sbjct: 1224 aaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccat 1283

                                                                        
Query: 423  cactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaaga 482
            ||||||||| ||||||||||||||||| || || || || || || ||||||||||||||
Sbjct: 1284 cactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaaga 1343

                            
Query: 483  ggtgatggaaggtgac 498
            ||||||||||||||||
Sbjct: 1344 ggtgatggaaggtgac 1359



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>dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E02, full
           insert sequence
          Length = 1302

 Score =  367 bits (185), Expect = 2e-98
 Identities = 347/401 (86%)
 Strand = Plus / Plus

                                                                       
Query: 98  tcgcccccttcggcgacctcgcctttatagctgctgtgcgcactcaggcactgcagctca 157
           |||||||||| || ||||| |||||| | || || |||||||| || ||  |||||||||
Sbjct: 1   tcgccccctttggggaccttgcctttgtcgccgccgtgcgcacacaagccttgcagctca 60

                                                                       
Query: 158 tatcattcggcgacgccatttcttcctccagccgctcgcctgagcgcctcttccgagttg 217
           ||||||||||||| || || ||||||||||||||| | || ||||||||||||||||| |
Sbjct: 61  tatcattcggcgatgctatctcttcctccagccgcgctccggagcgcctcttccgagtgg 120

                                                                       
Query: 218 tggacatgtatgaggctgtgcgggacatcctcccggaccttgaccctgtgttctccgacc 277
           |||||||||| ||||||||||||||| | ||||| |||||||| ||||||||| ||||||
Sbjct: 121 tggacatgtacgaggctgtgcgggaccttctccctgaccttgatcctgtgttcgccgacc 180

                                                                       
Query: 278 cttactctgctgcactccgtgcagaggtctctgccgtgcgcaacaccctcggttcctcaa 337
           | ||||||||||| ||||||||||||||| | || ||| ||||||||||||| || || |
Sbjct: 181 cgtactctgctgcgctccgtgcagaggtcacggcggtgtgcaacaccctcggctcatcga 240

                                                                       
Query: 338 tcaaaggtatattcatggaattggaaaatctcatccgccgagatcctgcccgggttgcca 397
           ||||||| ||||||||||| || ||||||||||||||||| |||||||| || |||||  
Sbjct: 241 tcaaaggcatattcatggagttagaaaatctcatccgccgtgatcctgctcgagttgcag 300

                                                                       
Query: 398 cccctggtggtggtatacaccccatcactcggtacgtcatgaactatctccgagccgcat 457
           |||  ||||| || ||||| |||||||||||||| ||||||||||||||||| || || |
Sbjct: 301 cccaaggtggaggcatacatcccatcactcggtatgtcatgaactatctccgtgctgctt 360

                                                    
Query: 458 gcggttcacgacagacattggaagaggtgatggaaggtgac 498
           | || || || ||||||||||||||||||||||||||||||
Sbjct: 361 gtgggtcgcggcagacattggaagaggtgatggaaggtgac 401



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>ref|NM_190417.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1959

 Score =  335 bits (169), Expect = 9e-89
 Identities = 416/497 (83%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 61
            ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| ||||
Sbjct: 858  gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 916

                                                                        
Query: 62   gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 121
            ||||||||||||| |||||||| ||||| ||||| |||||||| |  ||||||||||| |
Sbjct: 917  gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 976

                                                                        
Query: 122  ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 181
            || | ||||| || || || ||||  |||||||| || || |||||||||||  ||||| 
Sbjct: 977  ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 1036

                                                                        
Query: 182  cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 241
            |  | || ||  | || |||||||||||||| ||  | |||||||||||||| ||||| |
Sbjct: 1037 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 1096

                                                                        
Query: 242  acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 301
            || |||| || ||||| |||||||| ||  | || || |||||||||||||| ||||| |
Sbjct: 1097 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 1156

                                                                        
Query: 302  aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 361
            |||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1157 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 1216

                                                                        
Query: 362  aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 421
            ||||||||||||| || ||||||||||| ||| |    ||||||||||| |||||||| |
Sbjct: 1217 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 1276

                                                                        
Query: 422  tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 481
            |||| ||||| || |||||||||||||| || || || || ||| |||||||| ||||||
Sbjct: 1277 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 1336

                             
Query: 482  aggtgatggaaggtgac 498
            |||||||||||||||||
Sbjct: 1337 aggtgatggaaggtgac 1353



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  335 bits (169), Expect = 9e-89
 Identities = 416/497 (83%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                            
Query: 2        gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 61
                ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| ||||
Sbjct: 35403604 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 35403662

                                                                            
Query: 62       gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 121
                ||||||||||||| |||||||| ||||| ||||| |||||||| |  ||||||||||| |
Sbjct: 35403663 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 35403722

                                                                            
Query: 122      ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 181
                || | ||||| || || || ||||  |||||||| || || |||||||||||  ||||| 
Sbjct: 35403723 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 35403782

                                                                            
Query: 182      cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 241
                |  | || ||  | || |||||||||||||| ||  | |||||||||||||| ||||| |
Sbjct: 35403783 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 35403842

                                                                            
Query: 242      acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 301
                || |||| || ||||| |||||||| ||  | || || |||||||||||||| ||||| |
Sbjct: 35403843 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 35403902

                                                                            
Query: 302      aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 361
                |||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 35403903 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 35403962

                                                                            
Query: 362      aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 421
                ||||||||||||| || ||||||||||| ||| |    ||||||||||| |||||||| |
Sbjct: 35403963 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 35404022

                                                                            
Query: 422      tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 481
                |||| ||||| || |||||||||||||| || || || || ||| |||||||| ||||||
Sbjct: 35404023 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 35404082

                                 
Query: 482      aggtgatggaaggtgac 498
                |||||||||||||||||
Sbjct: 35404083 aggtgatggaaggtgac 35404099



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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score =  335 bits (169), Expect = 9e-89
 Identities = 416/497 (83%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 61
             ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| ||||
Sbjct: 27553 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 27611

                                                                         
Query: 62    gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 121
             ||||||||||||| |||||||| ||||| ||||| |||||||| |  ||||||||||| |
Sbjct: 27612 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 27671

                                                                         
Query: 122   ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 181
             || | ||||| || || || ||||  |||||||| || || |||||||||||  ||||| 
Sbjct: 27672 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 27731

                                                                         
Query: 182   cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 241
             |  | || ||  | || |||||||||||||| ||  | |||||||||||||| ||||| |
Sbjct: 27732 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 27791

                                                                         
Query: 242   acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 301
             || |||| || ||||| |||||||| ||  | || || |||||||||||||| ||||| |
Sbjct: 27792 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 27851

                                                                         
Query: 302   aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 361
             |||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 27852 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 27911

                                                                         
Query: 362   aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 421
             ||||||||||||| || ||||||||||| ||| |    ||||||||||| |||||||| |
Sbjct: 27912 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 27971

                                                                         
Query: 422   tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 481
             |||| ||||| || |||||||||||||| || || || || ||| |||||||| ||||||
Sbjct: 27972 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 28031

                              
Query: 482   aggtgatggaaggtgac 498
             |||||||||||||||||
Sbjct: 28032 aggtgatggaaggtgac 28048



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>dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133L14, full
            insert sequence
          Length = 2390

 Score =  335 bits (169), Expect = 9e-89
 Identities = 416/497 (83%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttcgacatcgcccgctggnatcccagccttcaacatggtcttccgcattctgattccca 61
            ||||||||| ||||| ||| ||||| |||||||| ||||| |||||||| ||||| ||||
Sbjct: 1056 gttcgacattgcccgatgg-atcccggccttcaagatggtgttccgcatcctgatcccca 1114

                                                                        
Query: 62   gcgagcgccgcctatgcgaccgcgtcttcgacggtctcgcccccttcggcgacctcgcct 121
            ||||||||||||| |||||||| ||||| ||||| |||||||| |  ||||||||||| |
Sbjct: 1115 gcgagcgccgcctctgcgaccgtgtctttgacggcctcgccccttatggcgacctcgctt 1174

                                                                        
Query: 122  ttatagctgctgtgcgcactcaggcactgcagctcatatcattcggcgacgccatttctt 181
            || | ||||| || || || ||||  |||||||| || || |||||||||||  ||||| 
Sbjct: 1175 ttgttgctgcagttcgtacccaggtgctgcagcttatctccttcggcgacgcagtttctg 1234

                                                                        
Query: 182  cctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtgcggg 241
            |  | || ||  | || |||||||||||||| ||  | |||||||||||||| ||||| |
Sbjct: 1235 ctgctagtcgtgctccagagcgcctcttccgtgtcattgacatgtatgaggccgtgcgag 1294

                                                                        
Query: 242  acatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgtgcag 301
            || |||| || ||||| |||||||| ||  | || || |||||||||||||| ||||| |
Sbjct: 1295 acctccttcctgacctcgaccctgtctttgctgatccctactctgctgcacttcgtgccg 1354

                                                                        
Query: 302  aggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaattgg 361
            |||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1355 aggtctctgctgtttgcaacacccttggttcctctatcaaaggtatattcatggaattgg 1414

                                                                        
Query: 362  aaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacacccca 421
            ||||||||||||| || ||||||||||| ||| |    ||||||||||| |||||||| |
Sbjct: 1415 aaaatctcatccgacgtgatcctgcccgtgtttctgttcctggtggtggcatacacccaa 1474

                                                                        
Query: 422  tcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattggaag 481
            |||| ||||| || |||||||||||||| || || || || ||| |||||||| ||||||
Sbjct: 1475 tcacccggtatgtgatgaactatctccgtgctgcgtgtggatcaagacagacactggaag 1534

                             
Query: 482  aggtgatggaaggtgac 498
            |||||||||||||||||
Sbjct: 1535 aggtgatggaaggtgac 1551



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>gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence
          Length = 1245

 Score =  216 bits (109), Expect = 6e-53
 Identities = 268/321 (83%)
 Strand = Plus / Plus

                                                                       
Query: 178 tcttcctccagccgctcgcctgagcgcctcttccgagttgtggacatgtatgaggctgtg 237
           |||||||| |||||| |||| |||||||| ||||| || || |||||||| |||||||||
Sbjct: 15  tcttcctcaagccgcgcgccggagcgccttttccgcgtcgttgacatgtacgaggctgtg 74

                                                                       
Query: 238 cgggacatcctcccggaccttgaccctgtgttctccgacccttactctgctgcactccgt 297
           || ||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 75  cgtgacatcctccctgaccttgatcctgtgttctctgacccatactccgctgcactccgt 134

                                                                       
Query: 298 gcagaggtctctgccgtgcgcaacaccctcggttcctcaatcaaaggtatattcatggaa 357
           || ||||||||  |  || ||||||| || || |     ||||| |||||||| ||||||
Sbjct: 135 gcggaggtctcctcgatgtgcaacacactggggtggggtatcaagggtatatttatggaa 194

                                                                       
Query: 358 ttggaaaatctcatccgccgagatcctgcccgggttgccacccctggtggtggtatacac 417
           |||||||||||||||||||| || ||||||||  ||||  |||  || || |  ||||| 
Sbjct: 195 ttggaaaatctcatccgccgtgaccctgcccgaattgctgcccaagggggcgtcatacat 254

                                                                       
Query: 418 cccatcactcggtacgtcatgaactatctccgagccgcatgcggttcacgacagacattg 477
           || ||||||||| | || ||||||||||||||||| || || || || || |||||||||
Sbjct: 255 cctatcactcgggatgttatgaactatctccgagctgcgtgtggatcgcggcagacattg 314

                                
Query: 478 gaagaggtgatggaaggtgac 498
           |||||||||||||||||||||
Sbjct: 315 gaagaggtgatggaaggtgac 335



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>ref|XM_959480.1| Neurospora crassa OR74A hypothetical protein (NCU03167.1) partial
           mRNA
          Length = 402

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 gctgtgcgcactcaggcactgc 151
           ||||||||||||||||||||||
Sbjct: 221 gctgtgcgcactcaggcactgc 242



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>ref|XM_330602.1| Neurospora crassa OR74A hypothetical protein (NCU03167.1) partial
           mRNA
          Length = 402

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 gctgtgcgcactcaggcactgc 151
           ||||||||||||||||||||||
Sbjct: 221 gctgtgcgcactcaggcactgc 242



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>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete sequence
          Length = 196132

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 504    tgctggtggtagagctgctgct 525
              ||||||||||||||||||||||
Sbjct: 148043 tgctggtggtagagctgctgct 148064



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 501    tagtgctggtggtagagctgctgct 525
              ||||| |||||||||||||||||||
Sbjct: 148367 tagtggtggtggtagagctgctgct 148391



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 501    tagtgctggtggtagagctgctgct 525
              ||||| |||||||||||||||||||
Sbjct: 148295 tagtggtggtggtagagctgctgct 148319



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 501    tagtgctggtggtagagctgctgct 525
              ||||| |||||||||||||||||||
Sbjct: 148247 tagtggtggtggtagagctgctgct 148271



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 501    tagtgctggtggtagagctgctgct 525
              ||||| |||||||||||||||||||
Sbjct: 148202 tagtggtggtggtagagctgctgct 148226



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 501    tagtgctggtggtagagctgctgct 525
              ||||| |||||||||||||||||||
Sbjct: 148085 tagtggtggtggtagagctgctgct 148109



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>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14
          Length = 68050

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 130   gctgtgcgcactcaggcactgc 151
             ||||||||||||||||||||||
Sbjct: 62386 gctgtgcgcactcaggcactgc 62365



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>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence
          Length = 162721

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 221   acatgtatgaggctgtgcgggacat 245
             ||||||||||| |||||||||||||
Sbjct: 45495 acatgtatgagcctgtgcgggacat 45519



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>gb|AY049011.1| Mus musculus melanin-concentrating hormone receptor 1 gene,
           complete cds, alternatively spliced
          Length = 5027

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 221 acatgtatgaggctgtgcgggacat 245
           ||||||||||| |||||||||||||
Sbjct: 163 acatgtatgagcctgtgcgggacat 187



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>gb|AY293839.1| Canavalia bonariensis small subunit ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and large subunit ribosomal RNA gene, partial
           sequence
          Length = 633

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 ggaccttgaccctgtgttctc 272
           |||||||||||||||||||||
Sbjct: 588 ggaccttgaccctgtgttctc 608



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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      gaccgcgtcttcgacggtctcgcc 102
               ||||||||||||| ||||||||||
Sbjct: 1859978 gaccgcgtcttcgccggtctcgcc 1859955



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>gb|BC104459.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2,
           transcript variant 2, mRNA (cDNA clone MGC:129931
           IMAGE:40030657), complete cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 323 ggtggtagagctgctgcttc 304



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>gb|BC104458.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2,
           transcript variant 2, mRNA (cDNA clone MGC:129930
           IMAGE:40030655), complete cds
          Length = 865

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 323 ggtggtagagctgctgcttc 304



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>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown,
              complete sequence
          Length = 142253

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    ttggaagaggtgatggaagg 494
              ||||||||||||||||||||
Sbjct: 114906 ttggaagaggtgatggaagg 114887



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>ref|NM_199456.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2
           (TEPP), transcript variant 2, mRNA
          Length = 875

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 332 ggtggtagagctgctgcttc 313



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>ref|NM_199046.1| Homo sapiens testis/prostate/placenta-expressed protein, isoform 2
           (TEPP), transcript variant 1, mRNA
          Length = 956

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 332 ggtggtagagctgctgcttc 313



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>gb|AY216323.1| Inula britannica tRNA-Ala (trnA) gene, partial sequence;
           chloroplast
          Length = 619

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ttctccgacccttactctgc 287
           ||||||||||||||||||||
Sbjct: 131 ttctccgacccttactctgc 112



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>gb|AY363223.1| Homo sapiens testis/prostate/placenta-expressed protein splice
           variant mRNA, complete cds, alternatively spliced
          Length = 956

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 332 ggtggtagagctgctgcttc 313



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>gb|AY363222.1| Homo sapiens testis/prostate/placenta-expressed protein mRNA,
           complete cds, alternatively spliced
          Length = 875

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 332 ggtggtagagctgctgcttc 313



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>gb|AC149585.7| Mus musculus BAC clone RP24-316M20 from chromosome y, complete sequence
          Length = 172093

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   tcatggaattggaaaatctcatcc 373
             |||||||||| |||||||||||||
Sbjct: 20389 tcatggaattagaaaatctcatcc 20412



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>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a
             novel pseudogene, part of the KCNQ5 gene for potassium
             voltage-gated channel KQT-like subfamily member 5, and a
             phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene,
             complete sequence
          Length = 154998

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   atgtatgaggctgtgcggga 242
             ||||||||||||||||||||
Sbjct: 89470 atgtatgaggctgtgcggga 89451



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>emb|X71659.1|RSBLNBAA R.sphaeroides genes glnA and glnB
          Length = 2460

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  gaccgcgtcttcgacggtctcgcc 102
           ||||||||||||| ||||||||||
Sbjct: 904 gaccgcgtcttcgccggtctcgcc 881



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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 77      gcgaccgcgtcttcgacggtctcg 100
               ||||||||||| ||||||||||||
Sbjct: 1528725 gcgaccgcgtcgtcgacggtctcg 1528748



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>gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, complete sequence
          Length = 188926

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   ggtggtagagctgctgcttc 527
             ||||||||||||||||||||
Sbjct: 53155 ggtggtagagctgctgcttc 53136



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>gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306,  section 432 of 469 of the
             complete genome
          Length = 14572

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   ttgccacccctggtggtggt 411
             ||||||||||||||||||||
Sbjct: 13529 ttgccacccctggtggtggt 13548



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>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence
          Length = 165543

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 350    tcatggaattggaaaatctcatcc 373
              |||||||||| |||||||||||||
Sbjct: 105885 tcatggaattagaaaatctcatcc 105908



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ggttcgacatcgcccgctgg 20
              ||||||||||||||||||||
Sbjct: 517132 ggttcgacatcgcccgctgg 517151



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>gb|AC010543.9| Homo sapiens chromosome 16 clone RP11-440K14, complete sequence
          Length = 180286

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    ggtggtagagctgctgcttc 527
              ||||||||||||||||||||
Sbjct: 140814 ggtggtagagctgctgcttc 140795



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>tpg|BK001513.1| TPA: TPA_exp: Sus scrofa Tepp (Tepp) mRNA, complete cds
          Length = 770

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ggtggtagagctgctgcttc 527
           ||||||||||||||||||||
Sbjct: 198 ggtggtagagctgctgcttc 179



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>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence
          Length = 150231

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   tcatggaattggaaaatctcatcc 373
             |||||||||| |||||||||||||
Sbjct: 90470 tcatggaattagaaaatctcatcc 90493



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>gb|AF032116.1|AF032116 Rhodobacter sphaeroides PII protein (glnB) gene, complete cds
          Length = 907

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  gaccgcgtcttcgacggtctcgcc 102
           ||||||||||||| ||||||||||
Sbjct: 904 gaccgcgtcttcgccggtctcgcc 881



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>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence
          Length = 189288

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     tcccagccttcaacatggtcttcc 46
              ||||||||||||||||||| ||||
Sbjct: 122743 tcccagccttcaacatggtgttcc 122720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,413,846
Number of Sequences: 3902068
Number of extensions: 3413846
Number of successful extensions: 67973
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67680
Number of HSP's gapped (non-prelim): 286
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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