ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal19b22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ003612.1| Agropyron cristatum pyrroline-5-carboxylate synthetase mRNA, partial cds Length = 406 Score = 381 bits (192), Expect = e-102 Identities = 218/227 (96%) Strand = Plus / Plus Query: 415 agtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtggaaatggtc 474 ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3 agtctcgcccagatgccctagtccagattgcagctctagcaatccgaagtggaaatggtc 62 Query: 475 ttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcataaggtcataa 534 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 63 ttctgctgaaaggaggaaaagaagctatgagatcgaacacaatattgcataaggtcataa 122 Query: 535 ccagcgtgattccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaag 594 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 123 ccagcgtgattccagatgttgttggtaaaaagcttattggccttgtaaaaagcaaagatg 182 Query: 595 aaattgctgatcttctaaagcttgacgatgtgattgatcttgntatt 641 |||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 183 aaatcgctgatcttctaaagcttgacgatgtgattgatcttgttatt 229
>gb|AY105865.1| Zea mays PCO085448 mRNA sequence Length = 1685 Score = 373 bits (188), Expect = e-100 Identities = 505/613 (82%) Strand = Plus / Plus Query: 24 gaagcaaatgtctgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgca 83 ||||||||| | |||| ||| ||||||||| ||| |||| |||||||||||||| ||| Sbjct: 50 gaagcaaatttgtgggcatgttccaaggaagctacagcccgagagatggcagttgcggca 109 Query: 84 aaagattgctcgcggcatctccagaatttgtcatcagaggagcgtaagaaaattttgcta 143 | ||| || ||| ||| ||| ||||| |||||||||||||| || || | ||||||||| Sbjct: 110 agagactgttcgaggcgtctacagaagttgtcatcagaggaacgcaaacagattttgcta 169 Query: 144 gatattgctgatgctctggaagcaaatgtgggtttaattatagctgagaatgaggctgat 203 |||||||||||||||||||||||||||| || | |||||| |||| ||||| || ||| Sbjct: 170 gatattgctgatgctctggaagcaaatgaggatgcaattatgtctgaaaatgatgccgat 229 Query: 204 ctagccgcggcacaagatgcaggctatgagaaatctttggttgctaggatgaccctgaag 263 | | || ||||||| ||| || ||||| || || |||||||||||||||||||| ||| Sbjct: 230 gttgaggcagcacaagttgctggttatgaaaagtcgttggttgctaggatgaccctaaag 289 Query: 264 gcaggaaagataacaagccttgctgaatccattcgtgcaattgcggacatggaggatcct 323 ||||||||||||||| ||||| |||||||||| || ||| ||||||||||| ||| Sbjct: 290 ccaggaaagataacaaatcttgcaagatccattcgtaaaactgctgacatggaggaccct 349 Query: 324 atttcacatacactgnnnnnnncagaggttgctaaggatttagtatttgagaagatgtac 383 ||||| |||||| || ||||||||||||| ||| | || |||||||| || Sbjct: 350 atttcccatacattgaaaagaacagaggttgctaaagatctggtttttgagaaagcatat 409 Query: 384 tgcccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagatt 443 ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 410 tgcccattgggtgttcttctcattatttttgagtctcgtcctgatgcattggtccagatt 469 Query: 444 gcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatg 503 ||| ||||||| ||||||||||| |||||||| ||| |||||||||| ||||||| |||| Sbjct: 470 gcatctctagcgatccgaagtggtaatggtctccttttgaaaggagggaaagaagttatg 529 Query: 504 agatcaaacacaatattgcataaggtcataaccagcgtgattccagatggtgttggtaaa 563 |||||||| ||||||| || ||||||||||| | || ||||| ||| |||||| ||| Sbjct: 530 agatcaaatgcaatattacacaaggtcataactggagttattcccgatactgttggcaaa 589 Query: 564 aagcttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaagcttgacgat 623 ||||| || |||||||| | |||||||| |||||||||||||| ||| |||||| ||| Sbjct: 590 aagctcataggccttgtgactagcaaagaggaaattgctgatctactagcgcttgatgat 649 Query: 624 gtgattgatcttg 636 || |||||||||| Sbjct: 650 gtaattgatcttg 662
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2208 Score = 369 bits (186), Expect = 8e-99 Identities = 347/403 (86%) Strand = Plus / Plus Query: 234 aaatctttggttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatcc 293 ||||| ||||||||| |||||||| | ||| |||||||||||| |||||| || | ||| Sbjct: 1114 aaatcattggttgctcggatgaccataaagccaggaaagataaaaagcctcgcaggatca 1173 Query: 294 attcgtgcaattgcggacatggaggatcctatttcacatacactgnnnnnnncagaggtt 353 ||||||| ||| || || |||||||| |||||||| ||||||||| |||||||| Sbjct: 1174 attcgtgaaatcgctgatatggaggaccctatttcccatacactgaaaagaacagaggtt 1233 Query: 354 gctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaattattttc 413 ||||| ||| | || |||||||| | || ||||||||||| ||||||||||||||||| Sbjct: 1234 gctaaagatcttgtttttgagaaaacatattgcccattgggtgttctcctaattattttt 1293 Query: 414 gagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtggaaatggt 473 ||||| |||||||||||| |||| ||||||||| || ||||||||||||||||||||||| Sbjct: 1294 gagtcccgtcctgatgccttggtacagattgcatctttagcaatccgaagtggaaatggt 1353 Query: 474 cttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcataaggtcata 533 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1354 cttctcttgaaaggaggaaaagaagctatgagatcaaacacaatactgcataaggtcata 1413 Query: 534 accagcgtgattccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaa 593 || | | |||||||||| |||||||||||| ||||||||||| || |||| |||||| Sbjct: 1414 actggtgcaattccagatgttgttggtaaaaaacttattggcctagtgaaaaacaaagat 1473 Query: 594 gaaattgctgatcttctaaagcttgacgatgtgattgatcttg 636 |||||||||||| | || |||||||| |||||||||||||||| Sbjct: 1474 gaaattgctgatttgctcaagcttgatgatgtgattgatcttg 1516 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 36 tgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgcaaaagattgctcg 95 |||| |||| ||||||||| ||| | ||||||||||| |||||||||| ||||||||| Sbjct: 916 tggggttgttccaaggaagcaacagcgcgtgagatggccgttgctgcaagagattgctcc 975 Query: 96 cggcatctccagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgat 155 | ||||| ||||| ||||| || |||||||||||||| ||||||||||| || || ||| Sbjct: 976 agacatctacagaaattgtcgtctgaggagcgtaagaagattttgctagacatcgccgat 1035 Query: 156 gctctggaagcaaatg 171 ||||| |||||||||| Sbjct: 1036 gctctagaagcaaatg 1051
>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full insert sequence Length = 2739 Score = 369 bits (186), Expect = 8e-99 Identities = 347/403 (86%) Strand = Plus / Plus Query: 234 aaatctttggttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatcc 293 ||||| ||||||||| |||||||| | ||| |||||||||||| |||||| || | ||| Sbjct: 1304 aaatcattggttgctcggatgaccataaagccaggaaagataaaaagcctcgcaggatca 1363 Query: 294 attcgtgcaattgcggacatggaggatcctatttcacatacactgnnnnnnncagaggtt 353 ||||||| ||| || || |||||||| |||||||| ||||||||| |||||||| Sbjct: 1364 attcgtgaaatcgctgatatggaggaccctatttcccatacactgaaaagaacagaggtt 1423 Query: 354 gctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaattattttc 413 ||||| ||| | || |||||||| | || ||||||||||| ||||||||||||||||| Sbjct: 1424 gctaaagatcttgtttttgagaaaacatattgcccattgggtgttctcctaattattttt 1483 Query: 414 gagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtggaaatggt 473 ||||| |||||||||||| |||| ||||||||| || ||||||||||||||||||||||| Sbjct: 1484 gagtcccgtcctgatgccttggtacagattgcatctttagcaatccgaagtggaaatggt 1543 Query: 474 cttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcataaggtcata 533 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1544 cttctcttgaaaggaggaaaagaagctatgagatcaaacacaatactgcataaggtcata 1603 Query: 534 accagcgtgattccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaa 593 || | | |||||||||| |||||||||||| ||||||||||| || |||| |||||| Sbjct: 1604 actggtgcaattccagatgttgttggtaaaaaacttattggcctagtgaaaaacaaagat 1663 Query: 594 gaaattgctgatcttctaaagcttgacgatgtgattgatcttg 636 |||||||||||| | || |||||||| |||||||||||||||| Sbjct: 1664 gaaattgctgatttgctcaagcttgatgatgtgattgatcttg 1706 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 36 tgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgcaaaagattgctcg 95 |||| |||| ||||||||| ||| | ||||||||||| |||||||||| ||||||||| Sbjct: 1106 tggggttgttccaaggaagcaacagcgcgtgagatggccgttgctgcaagagattgctcc 1165 Query: 96 cggcatctccagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgat 155 | ||||| ||||| ||||| || |||||||||||||| ||||||||||| || || ||| Sbjct: 1166 agacatctacagaaattgtcgtctgaggagcgtaagaagattttgctagacatcgccgat 1225 Query: 156 gctctggaagcaaatg 171 ||||| |||||||||| Sbjct: 1226 gctctagaagcaaatg 1241
>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full insert sequence Length = 3386 Score = 369 bits (186), Expect = 8e-99 Identities = 347/403 (86%) Strand = Plus / Plus Query: 234 aaatctttggttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatcc 293 ||||| ||||||||| |||||||| | ||| |||||||||||| |||||| || | ||| Sbjct: 1248 aaatcattggttgctcggatgaccataaagccaggaaagataaaaagcctcgcaggatca 1307 Query: 294 attcgtgcaattgcggacatggaggatcctatttcacatacactgnnnnnnncagaggtt 353 ||||||| ||| || || |||||||| |||||||| ||||||||| |||||||| Sbjct: 1308 attcgtgaaatcgctgatatggaggaccctatttcccatacactgaaaagaacagaggtt 1367 Query: 354 gctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaattattttc 413 ||||| ||| | || |||||||| | || ||||||||||| ||||||||||||||||| Sbjct: 1368 gctaaagatcttgtttttgagaaaacatattgcccattgggtgttctcctaattattttt 1427 Query: 414 gagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtggaaatggt 473 ||||| |||||||||||| |||| ||||||||| || ||||||||||||||||||||||| Sbjct: 1428 gagtcccgtcctgatgccttggtacagattgcatctttagcaatccgaagtggaaatggt 1487 Query: 474 cttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcataaggtcata 533 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1488 cttctcttgaaaggaggaaaagaagctatgagatcaaacacaatactgcataaggtcata 1547 Query: 534 accagcgtgattccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaa 593 || | | |||||||||| |||||||||||| ||||||||||| || |||| |||||| Sbjct: 1548 actggtgcaattccagatgttgttggtaaaaaacttattggcctagtgaaaaacaaagat 1607 Query: 594 gaaattgctgatcttctaaagcttgacgatgtgattgatcttg 636 |||||||||||| | || |||||||| |||||||||||||||| Sbjct: 1608 gaaattgctgatttgctcaagcttgatgatgtgattgatcttg 1650 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 36 tgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgcaaaagattgctcg 95 |||| |||| ||||||||| ||| | ||||||||||| |||||||||| ||||||||| Sbjct: 1050 tggggttgttccaaggaagcaacagcgcgtgagatggccgttgctgcaagagattgctcc 1109 Query: 96 cggcatctccagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgat 155 | ||||| ||||| ||||| || |||||||||||||| ||||||||||| || || ||| Sbjct: 1110 agacatctacagaaattgtcgtctgaggagcgtaagaagattttgctagacatcgccgat 1169 Query: 156 gctctggaagcaaatg 171 ||||| |||||||||| Sbjct: 1170 gctctagaagcaaatg 1185
>gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2151 Score = 147 bits (74), Expect = 5e-32 Identities = 161/190 (84%) Strand = Plus / Plus Query: 346 cagaggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaa 405 ||||||||||| | |||||||| ||||||| | | |||||||| || |||||| ||| Sbjct: 1169 cagaggttgctgatgatttagttcttgagaaaacatcttgcccattaggtgttctcttaa 1228 Query: 406 ttattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtg 465 || |||| ||||| || ||||||||| |||| ||||||||| || | ||||| ||||||| Sbjct: 1229 ttgtttttgagtcccgacctgatgccttggttcagattgcatctttggcaattcgaagtg 1288 Query: 466 gaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcata 525 | ||||||||||| || ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 1289 gtaatggtcttctcctaaaaggtggaaaagaagctatcagatcaaacacgatattgcata 1348 Query: 526 aggtcataac 535 |||| ||||| Sbjct: 1349 aggttataac 1358 Score = 137 bits (69), Expect = 5e-29 Identities = 195/237 (82%) Strand = Plus / Plus Query: 63 cgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcagag 122 ||||||||||| ||||| |||| |||||| || ||||||| |||||||||||||||||| Sbjct: 886 cgtgagatggctgttgccgcaagagattgttcaaggcatctacagaatttgtcatcagag 945 Query: 123 gagcgtaagaaaattttgctagatattgctgatgctctggaagcaaatgtgggtttaatt 182 || || || || || ||||||||| |||| |||||| |||| ||||||| || |||||| Sbjct: 946 gaacgaaaaaagatattgctagatgttgcagatgctttggaggcaaatgaggatttaata 1005 Query: 183 atagctgagaatgaggctgatctagccgcggcacaagatgcaggctatgagaaatctttg 242 | |||||||||| |||||| |||| ||||| |||| ||| || |||||||| ||||| Sbjct: 1006 aggtctgagaatgaagctgatgtagctgcggcccaagttgctggatatgagaagcctttg 1065 Query: 243 gttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatccattcgt 299 |||||||| |||| | || ||||||||||| |||||||||| |||| |||||| Sbjct: 1066 gttgctagattgactataaaaccaggaaagatagcaagccttgcaaaatctattcgt 1122 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 554 tgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaa 613 ||||||| |||| |||||||||||||| | || | ||| || || || ||| | ||||| Sbjct: 1377 tgttggtgaaaaacttattggccttgttacaactagagatgagatcgcagatttgctaaa 1436 Query: 614 gcttgacgatgtgattgatcttg 636 |||||| ||||| |||||||||| Sbjct: 1437 gcttgatgatgtcattgatcttg 1459
>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full insert sequence Length = 2767 Score = 147 bits (74), Expect = 5e-32 Identities = 161/190 (84%) Strand = Plus / Plus Query: 346 cagaggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaa 405 ||||||||||| | |||||||| ||||||| | | |||||||| || |||||| ||| Sbjct: 1287 cagaggttgctgatgatttagttcttgagaaaacatcttgcccattaggtgttctcttaa 1346 Query: 406 ttattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtg 465 || |||| ||||| || ||||||||| |||| ||||||||| || | ||||| ||||||| Sbjct: 1347 ttgtttttgagtcccgacctgatgccttggttcagattgcatctttggcaattcgaagtg 1406 Query: 466 gaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcata 525 | ||||||||||| || ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 1407 gtaatggtcttctcctaaaaggtggaaaagaagctatcagatcaaacacgatattgcata 1466 Query: 526 aggtcataac 535 |||| ||||| Sbjct: 1467 aggttataac 1476 Score = 137 bits (69), Expect = 5e-29 Identities = 195/237 (82%) Strand = Plus / Plus Query: 63 cgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcagag 122 ||||||||||| ||||| |||| |||||| || ||||||| |||||||||||||||||| Sbjct: 1004 cgtgagatggctgttgccgcaagagattgttcaaggcatctacagaatttgtcatcagag 1063 Query: 123 gagcgtaagaaaattttgctagatattgctgatgctctggaagcaaatgtgggtttaatt 182 || || || || || ||||||||| |||| |||||| |||| ||||||| || |||||| Sbjct: 1064 gaacgaaaaaagatattgctagatgttgcagatgctttggaggcaaatgaggatttaata 1123 Query: 183 atagctgagaatgaggctgatctagccgcggcacaagatgcaggctatgagaaatctttg 242 | |||||||||| |||||| |||| ||||| |||| ||| || |||||||| ||||| Sbjct: 1124 aggtctgagaatgaagctgatgtagctgcggcccaagttgctggatatgagaagcctttg 1183 Query: 243 gttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatccattcgt 299 |||||||| |||| | || ||||||||||| |||||||||| |||| |||||| Sbjct: 1184 gttgctagattgactataaaaccaggaaagatagcaagccttgcaaaatctattcgt 1240 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 554 tgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaa 613 ||||||| |||| |||||||||||||| | || | ||| || || || ||| | ||||| Sbjct: 1495 tgttggtgaaaaacttattggccttgttacaactagagatgagatcgcagatttgctaaa 1554 Query: 614 gcttgacgatgtgattgatcttg 636 |||||| ||||| |||||||||| Sbjct: 1555 gcttgatgatgtcattgatcttg 1577
>dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078N24, full insert sequence Length = 1821 Score = 147 bits (74), Expect = 5e-32 Identities = 161/190 (84%) Strand = Plus / Plus Query: 346 cagaggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaa 405 ||||||||||| | |||||||| ||||||| | | |||||||| || |||||| ||| Sbjct: 1287 cagaggttgctgatgatttagttcttgagaaaacatcttgcccattaggtgttctcttaa 1346 Query: 406 ttattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtg 465 || |||| ||||| || ||||||||| |||| ||||||||| || | ||||| ||||||| Sbjct: 1347 ttgtttttgagtcccgacctgatgccttggttcagattgcatctttggcaattcgaagtg 1406 Query: 466 gaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcata 525 | ||||||||||| || ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 1407 gtaatggtcttctcctaaaaggtggaaaagaagctatcagatcaaacacgatattgcata 1466 Query: 526 aggtcataac 535 |||| ||||| Sbjct: 1467 aggttataac 1476 Score = 137 bits (69), Expect = 5e-29 Identities = 195/237 (82%) Strand = Plus / Plus Query: 63 cgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcagag 122 ||||||||||| ||||| |||| |||||| || ||||||| |||||||||||||||||| Sbjct: 1004 cgtgagatggctgttgccgcaagagattgttcaaggcatctacagaatttgtcatcagag 1063 Query: 123 gagcgtaagaaaattttgctagatattgctgatgctctggaagcaaatgtgggtttaatt 182 || || || || || ||||||||| |||| |||||| |||| ||||||| || |||||| Sbjct: 1064 gaacgaaaaaagatattgctagatgttgcagatgctttggaggcaaatgaggatttaata 1123 Query: 183 atagctgagaatgaggctgatctagccgcggcacaagatgcaggctatgagaaatctttg 242 | |||||||||| |||||| |||| ||||| |||| ||| || |||||||| ||||| Sbjct: 1124 aggtctgagaatgaagctgatgtagctgcggcccaagttgctggatatgagaagcctttg 1183 Query: 243 gttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatccattcgt 299 |||||||| |||| | || ||||||||||| |||||||||| |||| |||||| Sbjct: 1184 gttgctagattgactataaaaccaggaaagatagcaagccttgcaaaatctattcgt 1240 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 554 tgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaa 613 ||||||| |||| |||||||||||||| | || | ||| || || || ||| | ||||| Sbjct: 1495 tgttggtgaaaaacttattggccttgttacaactagagatgagatcgcagatttgctaaa 1554 Query: 614 gcttgacgatgtgattgatcttg 636 |||||| ||||| |||||||||| Sbjct: 1555 gcttgatgatgtcattgatcttg 1577
>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase, complete cds Length = 2549 Score = 147 bits (74), Expect = 5e-32 Identities = 161/190 (84%) Strand = Plus / Plus Query: 346 cagaggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaa 405 ||||||||||| | |||||||| ||||||| | | |||||||| || |||||| ||| Sbjct: 1267 cagaggttgctgatgatttagttcttgagaaaacatcttgcccattaggtgttctcttaa 1326 Query: 406 ttattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtg 465 || |||| ||||| || ||||||||| |||| ||||||||| || | ||||| ||||||| Sbjct: 1327 ttgtttttgagtcccgacctgatgccttggttcagattgcatctttggcaattcgaagtg 1386 Query: 466 gaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaacacaatattgcata 525 | ||||||||||| || ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 1387 gtaatggtcttctcctaaaaggtggaaaagaagctatcagatcaaacacgatattgcata 1446 Query: 526 aggtcataac 535 |||| ||||| Sbjct: 1447 aggttataac 1456 Score = 137 bits (69), Expect = 5e-29 Identities = 195/237 (82%) Strand = Plus / Plus Query: 63 cgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcagag 122 ||||||||||| ||||| |||| |||||| || ||||||| |||||||||||||||||| Sbjct: 984 cgtgagatggctgttgccgcaagagattgttcaaggcatctacagaatttgtcatcagag 1043 Query: 123 gagcgtaagaaaattttgctagatattgctgatgctctggaagcaaatgtgggtttaatt 182 || || || || || ||||||||| |||| |||||| |||| ||||||| || |||||| Sbjct: 1044 gaacgaaaaaagatattgctagatgttgcagatgctttggaggcaaatgaggatttaata 1103 Query: 183 atagctgagaatgaggctgatctagccgcggcacaagatgcaggctatgagaaatctttg 242 | |||||||||| |||||| |||| ||||| |||| ||| || |||||||| ||||| Sbjct: 1104 aggtctgagaatgaagctgatgtagctgcggcccaagttgctggatatgagaagcctttg 1163 Query: 243 gttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaatccattcgt 299 |||||||| |||| | || ||||||||||| |||||||||| |||| |||||| Sbjct: 1164 gttgctagattgactataaaaccaggaaagatagcaagccttgcaaaatctattcgt 1220 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 554 tgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaa 613 ||||||| |||| |||||||||||||| | || | ||| || || || ||| | ||||| Sbjct: 1475 tgttggtgaaaaacttattggccttgttacaactagagatgagatcgcagatttgctaaa 1534 Query: 614 gcttgacgatgtgattgatcttg 636 |||||| ||||| |||||||||| Sbjct: 1535 gcttgatgatgtcattgatcttg 1557
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 438 cagattgcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaa 497 ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 36430457 cagattgcatctttagcaatccgaagtggaaatggtcttctcttgaaaggaggaaaagaa 36430516 Query: 498 gctatgagatcaaacacaatattgcataaggt 529 ||||||||||||||||||||| |||||||||| Sbjct: 36430517 gctatgagatcaaacacaatactgcataaggt 36430548 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 349 aggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaatta 408 |||||||||| ||| | || |||||||| | || ||||||||||| ||||||||||||| Sbjct: 36430282 aggttgctaaagatcttgtttttgagaaaacatattgcccattgggtgttctcctaatta 36430341 Query: 409 ttttcgagtctcgtcctgatgccctggt 436 |||| ||||| |||||||||||| |||| Sbjct: 36430342 tttttgagtcccgtcctgatgccttggt 36430369 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 543 attccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgct 602 |||||||||| |||||||||||| ||||||||||| || |||| |||||| ||||||||| Sbjct: 36430651 attccagatgttgttggtaaaaaacttattggcctagtgaaaaacaaagatgaaattgct 36430710 Query: 603 gat 605 ||| Sbjct: 36430711 gat 36430713 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 105 cagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgatgctctggaa 164 ||||| ||||| || |||||||||||||| ||||||||||| || || |||||||| ||| Sbjct: 36429792 cagaaattgtcgtctgaggagcgtaagaagattttgctagacatcgccgatgctctagaa 36429851 Query: 165 gcaaatg 171 ||||||| Sbjct: 36429852 gcaaatg 36429858 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 36 tgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgcaaaagattgctc 94 |||| |||| ||||||||| ||| | ||||||||||| |||||||||| ||||||||| Sbjct: 36429507 tggggttgttccaaggaagcaacagcgcgtgagatggccgttgctgcaagagattgctc 36429565 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 613 agcttgacgatgtgattgatcttg 636 ||||||| |||||||||||||||| Sbjct: 36430792 agcttgatgatgtgattgatcttg 36430815
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 438 cagattgcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaa 497 ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 82296 cagattgcatctttagcaatccgaagtggaaatggtcttctcttgaaaggaggaaaagaa 82355 Query: 498 gctatgagatcaaacacaatattgcataaggt 529 ||||||||||||||||||||| |||||||||| Sbjct: 82356 gctatgagatcaaacacaatactgcataaggt 82387 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 349 aggttgctaaggatttagtatttgagaagatgtactgcccattgggcgttctcctaatta 408 |||||||||| ||| | || |||||||| | || ||||||||||| ||||||||||||| Sbjct: 82121 aggttgctaaagatcttgtttttgagaaaacatattgcccattgggtgttctcctaatta 82180 Query: 409 ttttcgagtctcgtcctgatgccctggt 436 |||| ||||| |||||||||||| |||| Sbjct: 82181 tttttgagtcccgtcctgatgccttggt 82208 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 543 attccagatggtgttggtaaaaagcttattggccttgtaaaaagcaaagaagaaattgct 602 |||||||||| |||||||||||| ||||||||||| || |||| |||||| ||||||||| Sbjct: 82490 attccagatgttgttggtaaaaaacttattggcctagtgaaaaacaaagatgaaattgct 82549 Query: 603 gat 605 ||| Sbjct: 82550 gat 82552 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 105 cagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgatgctctggaa 164 ||||| ||||| || |||||||||||||| ||||||||||| || || |||||||| ||| Sbjct: 81631 cagaaattgtcgtctgaggagcgtaagaagattttgctagacatcgccgatgctctagaa 81690 Query: 165 gcaaatg 171 ||||||| Sbjct: 81691 gcaaatg 81697 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 36 tgggattgtaccaaggaagtgacaacccgtgagatggcagttgctgcaaaagattgctc 94 |||| |||| ||||||||| ||| | ||||||||||| |||||||||| ||||||||| Sbjct: 81346 tggggttgttccaaggaagcaacagcgcgtgagatggccgttgctgcaagagattgctc 81404 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 613 agcttgacgatgtgattgatcttg 636 ||||||| |||||||||||||||| Sbjct: 82631 agcttgatgatgtgattgatcttg 82654
>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 Score = 131 bits (66), Expect = 3e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 384 tgcccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagatt 443 ||||| ||||| ||||| | |||||||| ||||| || ||||||||| | ||||||||| Sbjct: 1289 tgccctttgggtgttctattgattatttttgagtcccgacctgatgccttagtccagatt 1348 Query: 444 gcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatg 503 || || |||| || |||||||| ||||||||||| || ||||| ||||||||||| ||| Sbjct: 1349 gcgtctttagccattcgaagtggtaatggtcttctcctaaaaggtggaaaagaagcaatg 1408 Query: 504 agatcaaacacaatattgcataaggtcataacca 537 ||||||||| |||||||||||||||| ||||||| Sbjct: 1409 agatcaaacgcaatattgcataaggttataacca 1442 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 97 ggcatctccagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgatg 156 ||||||| ||||||||||||||||||||||| |||||||| || ||||| |||| |||| Sbjct: 1002 ggcatctacagaatttgtcatcagaggagcgcaagaaaatattattagatgttgcggatg 1061 Query: 157 ctctggaagcaaatgtgggtttaattatagctgagaatgaggctgatctagccgcggcac 216 || | || ||||||| || |||||||| | | |||||||| || ||| |||| || |||| Sbjct: 1062 ctttagaggcaaatgaggatttaattagatccgagaatgaagcagatttagcagcagcac 1121 Query: 217 aagatgcaggctatgagaaatctttggttgctaggatgaccctgaaggcaggaaagataa 276 | || || || ||||||| |||||||| |||| |||| ||||| ||||||||||| Sbjct: 1122 atgaggctgggtatgagagtgctttggtttctagattgactctgaaaccaggaaagatag 1181 Query: 277 caagccttgc 286 |||||||||| Sbjct: 1182 caagccttgc 1191
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2260 Score = 131 bits (66), Expect = 3e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 384 tgcccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagatt 443 ||||| ||||| ||||| | |||||||| ||||| || ||||||||| | ||||||||| Sbjct: 1315 tgccctttgggtgttctattgattatttttgagtcccgacctgatgccttagtccagatt 1374 Query: 444 gcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatg 503 || || |||| || |||||||| ||||||||||| || ||||| ||||||||||| ||| Sbjct: 1375 gcgtctttagccattcgaagtggtaatggtcttctcctaaaaggtggaaaagaagcaatg 1434 Query: 504 agatcaaacacaatattgcataaggtcataacca 537 ||||||||| |||||||||||||||| ||||||| Sbjct: 1435 agatcaaacgcaatattgcataaggttataacca 1468 Score = 113 bits (57), Expect = 7e-22 Identities = 183/225 (81%) Strand = Plus / Plus Query: 62 ccgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcaga 121 |||||| ||||| ||||||||| ||||| || ||| ||| ||||||||||||||||| Sbjct: 993 ccgtgaaatggctgttgctgcacgggattgttcaaggcgtctacagaatttgtcatcaga 1052 Query: 122 ggagcgtaagaaaattttgctagatattgctgatgctctggaagcaaatgtgggtttaat 181 |||||| |||||||| ||| ||||| |||| |||||| | || ||||||| || |||||| Sbjct: 1053 ggagcgcaagaaaatattgttagatgttgcggatgctttagaggcaaatgaggatttaat 1112 Query: 182 tatagctgagaatgaggctgatctagccgcggcacaagatgcaggctatgagaaatcttt 241 || | | |||||||| || ||| |||| || ||||| || || || ||||||| |||| Sbjct: 1113 tagatccgagaatgaagcagatttagcagcagcacatgaggctgggtatgagagtgcttt 1172 Query: 242 ggttgctaggatgaccctgaaggcaggaaagataacaagccttgc 286 |||| |||| |||| ||||| ||||||||||| |||||||||| Sbjct: 1173 ggtttctagattgactctgaaaccaggaaagatagcaagccttgc 1217
>gb|AY109740.1| Zea mays CL2942_1 mRNA sequence Length = 1961 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 423 cctgatgccctggtccagattgcagctctagcaatccgaagtggaaatggtcttcttctg 482 ||||||||| | ||||||||||| || ||||| | |||||||| ||||||||||| ||| Sbjct: 699 cctgatgccttagtccagattgcgtctttagcagttcgaagtggcaatggtcttctcctg 758 Query: 483 aaaggaggaaaagaagctatgagatcaaacacaatattgcataaggtcataac 535 ||||| ||||||||||| |||||||| |||||| |||| |||||||| ||||| Sbjct: 759 aaaggtggaaaagaagccatgagatcgaacacagtattacataaggttataac 811 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 567 cttattggccttgtaaaaagcaaagaagaaattgctgatcttctaaagcttgacgatgtg 626 |||||||||||||| | ||| | ||| ||||| |||||| | ||||||||||| ||||| Sbjct: 843 cttattggccttgttacaagtagagatgaaatcgctgatttactaaagcttgatgatgtc 902 Query: 627 attgatcttg 636 |||||||||| Sbjct: 903 attgatcttg 912 Score = 60.0 bits (30), Expect = 9e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 63 cgtgagatggcagttgctgcaaaagattgctcgcggcatctccagaatttgtcatcagag 122 ||||||||||| |||||||||| ||| || || ||| ||| |||||||| ||||| || Sbjct: 339 cgtgagatggctgttgctgcaagagaatgttcaaggcgtctgcagaatttatcatcggat 398 Query: 123 gagcgtaagaaaattttgctagatattgctgatgctctggaa 164 || || |||||||| ||| |||| ||||| |||||| ||||| Sbjct: 399 gaacgcaagaaaatattgttagacattgcagatgctttggaa 440 Score = 48.1 bits (24), Expect = 0.036 Identities = 54/64 (84%) Strand = Plus / Plus Query: 232 agaaatctttggttgctaggatgaccctgaaggcaggaaagataacaagccttgctgaat 291 ||||||||||||||| ||| |||| ||||| ||| ||||||| |||||||||| ||| Sbjct: 508 agaaatctttggttgatagattgacattgaagccagaaaagatagcaagccttgcgaaat 567 Query: 292 ccat 295 |||| Sbjct: 568 ccat 571
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 439 agattgcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaag 498 |||||||| || | ||||| |||||||| ||||||||||| || ||||| |||||||||| Sbjct: 75369 agattgcatctttggcaattcgaagtggtaatggtcttctcctaaaaggtggaaaagaag 75310 Query: 499 ctatgagatcaaacacaatattgcataaggt 529 |||| ||||||||||| |||||||||||||| Sbjct: 75309 ctatcagatcaaacacgatattgcataaggt 75279 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 105 cagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgatgctctggaa 164 |||||||||||||||||||| || || || || ||||||||| |||| |||||| |||| Sbjct: 76027 cagaatttgtcatcagaggaacgaaaaaagatattgctagatgttgcagatgctttggag 75968 Query: 165 gcaaatgtgggtttaattatagctgagaatgaggctgatctagccgcggcacaagatgca 224 ||||||| || |||||| | |||||||||| |||||| |||| ||||| |||| ||| Sbjct: 75967 gcaaatgaggatttaataaggtctgagaatgaagctgatgtagctgcggcccaagttgct 75908 Query: 225 ggctatgagaaatctttggttgctag 250 || |||||||| ||||||||||||| Sbjct: 75907 ggatatgagaagcctttggttgctag 75882
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 439 agattgcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaag 498 |||||||| || | ||||| |||||||| ||||||||||| || ||||| |||||||||| Sbjct: 22232104 agattgcatctttggcaattcgaagtggtaatggtcttctcctaaaaggtggaaaagaag 22232045 Query: 499 ctatgagatcaaacacaatattgcataaggt 529 |||| ||||||||||| |||||||||||||| Sbjct: 22232044 ctatcagatcaaacacgatattgcataaggt 22232014 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 105 cagaatttgtcatcagaggagcgtaagaaaattttgctagatattgctgatgctctggaa 164 |||||||||||||||||||| || || || || ||||||||| |||| |||||| |||| Sbjct: 22232762 cagaatttgtcatcagaggaacgaaaaaagatattgctagatgttgcagatgctttggag 22232703 Query: 165 gcaaatgtgggtttaattatagctgagaatgaggctgatctagccgcggcacaagatgca 224 ||||||| || |||||| | |||||||||| |||||| |||| ||||| |||| ||| Sbjct: 22232702 gcaaatgaggatttaataaggtctgagaatgaagctgatgtagctgcggcccaagttgct 22232643 Query: 225 ggctatgagaaatctttggttgctag 250 || |||||||| ||||||||||||| Sbjct: 22232642 ggatatgagaagcctttggttgctag 22232617
>emb|AJ005686.1|VVI5686 Vitis vinifera mRNA for pyrroline-5-carboxylate synthetase (delta 1 type) Length = 2374 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 375 aagatgtactgcccattgggcgttctcctaattattttcgagtctcgtcctgatgccctg 434 ||||||| |||||||| || || ||||||||| |||| |||||||| || |||| ||| Sbjct: 1251 aagatgtcatgcccattaggtgtgctcctaattgtttttgagtctcgaccaaatgctctg 1310 Query: 435 gtccagattgcagctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaa 494 || ||||| || | |||||||||||||||| ||||| ||||| ||||||| |||||| Sbjct: 1311 gtacagatagcttcattagcaatccgaagtgggaatggacttctcttgaaaggtggaaaa 1370 Query: 495 ga 496 || Sbjct: 1371 ga 1372
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA, complete cds Length = 2551 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 386 cccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagattgc 445 |||||| ||||| ||||| ||| |||| |||||||| |||||||| || || ||||| || Sbjct: 1302 cccattaggcgtactcctgattgtttttgagtctcgacctgatgcacttgtacagatagc 1361 Query: 446 agctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatgag 505 | || || ||||| ||||||||||||||||| |||| || ||||| || || | ||| Sbjct: 1362 ttcacttgctatccggagtggaaatggtcttctattgaagggtggaaaggaggccaggag 1421 Query: 506 atcaaa 511 |||||| Sbjct: 1422 atcaaa 1427
>gb|M92276.1|VIRPYRR Vigna aconitifolia pyrroline-5-carboxylate synthetase associated mRNA sequence Length = 2417 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 390 ttgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagattgcagct 449 ||||| || ||||| ||| |||| ||||| ||||||||||| || || ||||| || | Sbjct: 1252 ttgggagtgctccttattgtttttgagtcacgtcctgatgctcttgtacagatagcttca 1311 Query: 450 ctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatgagatca 509 | |||||||||||||| ||||| ||||| ||||||| || |||||||||| | ||||| Sbjct: 1312 ttggcaatccgaagtgggaatgggcttctcttgaaaggtggcaaagaagctaagcgatca 1371 Query: 510 aa 511 || Sbjct: 1372 aa 1373
>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2148 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 403 taattattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaa 462 ||||| |||| |||||||| |||||||| || || ||||| || || | |||||||||| Sbjct: 1226 taattgtttttgagtctcgccctgatgcactagtacagatagcttctttggcaatccgaa 1285 Query: 463 gtggaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaa 511 |||| ||||| ||||| |||||||||| || || |||| | ||||||| Sbjct: 1286 gtgggaatgggcttctcttgaaaggaggcaaggaggctaagcgatcaaa 1334
>emb|X98421.1|MSP5CS1 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-1 Length = 2603 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 390 ttgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagattgcagct 449 ||||| ||||| ||||||||||||||||||| |||||||| |||| ||||| || | Sbjct: 1378 ttgggagttcttttaattattttcgagtctcgccctgatgcattggtacagatagcttcc 1437 Query: 450 ctagcaatccgaagtggaaatggtcttcttctgaaaggagg 490 | ||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1438 ttggcaatacgaagtgggaatgggcttctcttgaaaggagg 1478
>emb|AJ278818.1|MTR278818 Medicago truncatula mRNA for pyrroline-5-carboxylate synthetase 1 (p5CS1 gene) Length = 2520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 403 taattattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaa 462 ||||||||||||||||||| |||||||| |||| ||||| || | | ||||| |||| Sbjct: 1296 taattattttcgagtctcgccctgatgcattggtacagatagcttccttggcaatacgaa 1355 Query: 463 gtggaaatggtcttcttctgaaaggagg 490 |||| ||||| ||||| |||||||||| Sbjct: 1356 gtgggaatgggcttctcttgaaaggagg 1383
>gb|AF314812.1|AF314812 Brassica napus delta 1-pyrroline-5-carboxylate synthetase B mRNA, complete cds Length = 2529 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 387 ccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagattgca 446 ||||| || ||||| || ||| |||| || || ||||||||||| || || ||||| || Sbjct: 1332 ccattaggtgttcttctgattgtttttgaatcccgtcctgatgcacttgttcagatagct 1391 Query: 447 gctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaaaga 496 | || |||||| | ||||||||||||||||| ||||| || |||||||| Sbjct: 1392 tcacttgcaatcaggagtggaaatggtcttctgctgaagggtggaaaaga 1441
>gb|U60267.1|SLU60267 Solanum lycopersicum delta 1-pyrroline-5-carboxylate synthetase (tomPRO2) mRNA, complete cds Length = 2239 Score = 52.0 bits (26), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 612 aagcttgacgatgtgattgatcttgntat 640 ||||||||||||||||||||||||| ||| Sbjct: 1478 aagcttgacgatgtgattgatcttgttat 1506 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 gatattgctgatgctctggaagcaaatg 171 ||||| |||||||| ||||||||||||| Sbjct: 1010 gatatagctgatgcactggaagcaaatg 1037
>dbj|AB056452.2| Vigna unguiculata VuP5CS mRNA, complete cds Length = 2791 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 406 ttattttcgagtctcgtcctgatgccctggtccagattgcagctctagcaatccgaagtg 465 |||| ||||||||||| || |||||||| || ||||| || || | ||||| ||||||| Sbjct: 1394 ttatattcgagtctcgaccagatgcccttgtgcagatagctgcattggcaattcgaagtg 1453 Query: 466 gaaatggtcttcttctgaaaggaggaaaagaagc 499 | |||||| | || || ||||| ||||||||||| Sbjct: 1454 ggaatggtttactgcttaaaggtggaaaagaagc 1487
>ref|NM_115419.3| Arabidopsis thaliana catalytic/ glutamate 5-kinase/ glutamate-5-semialdehyde dehydrogenase AT3G55610 mRNA, complete cds Length = 2541 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1380 gcaatccggagtggaaatggtcttctgctgaagggtggaaa 1420
>emb|Y09355.1|ATP5CS2 A.thaliana mRNA for pyrroline-5-carboxlyate synthetase Length = 2440 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1350 gcaatccggagtggaaatggtcttctgctgaagggtggaaa 1390
>emb|X86778.1|ATP5CSBGN A.thaliana p5csB gene Length = 5789 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 3237 gcaatccggagtggaaatggtcttctgctgaagggtggaaa 3277
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 14286 gcaatccggagtggaaatggtcttctgctgaagggtggaaa 14246
>gb|AY091766.1| Arabidopsis thaliana AT3g55610/F1I16_20 mRNA, complete cds Length = 2517 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1380 gcaatccggagtggaaatggtcttctgctgaagggtggaaa 1420
>gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxylase synthetase mRNA, complete cds Length = 2181 Score = 48.1 bits (24), Expect = 0.036 Identities = 87/108 (80%) Strand = Plus / Plus Query: 386 cccattgggcgttctcctaattattttcgagtctcgtcctgatgccctggtccagattgc 445 |||||| ||||| ||||| ||||||| || ||||| |||||||| || || | ||| || Sbjct: 1209 cccattaggcgtactcctggttatttttgaatctcgccctgatgcacttgtgcggatagc 1268 Query: 446 agctctagcaatccgaagtggaaatggtcttcttctgaaaggaggaaa 493 | || || ||||| ||||||||||||||||| ||||||| ||||| Sbjct: 1269 ttcacttgccatccggagtggaaatggtcttctattgaaaggtggaaa 1316
>emb|AJ715852.1| Lactuca sativa partial p5cs gene for delta 1-pyrroline-5-carboxylate synthetase, cultivar Romano Length = 839 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 453 gcaatccgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaa 511 |||||||| ||||| |||||| | | ||||||||||| |||||||||| |||||||| Sbjct: 61 gcaatccgtagtgggaatggtttgttactgaaaggagggaaagaagctaaaagatcaaa 119
>ref|NM_201912.1| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.2 mRNA, complete cds Length = 2519 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1295 atccgtagtggaaatggtcttctgctgaagggtggaaa 1332 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 971 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1011
>ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.1 mRNA, complete cds Length = 2886 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1659 atccgtagtggaaatggtcttctgctgaagggtggaaa 1696 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1335 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1375
>gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxylase synthetase (P5C1) (At2g39800) mRNA, complete cds Length = 2185 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1279 atccgtagtggaaatggtcttctgctgaagggtggaaa 1316 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 955 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 995
>emb|X89414.1|ATDNAP3CG A.thaliana DNA for pyrroline-5-carboxylase synthetase gene Length = 6145 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 2738 atccgtagtggaaatggtcttctgctgaagggtggaaa 2775 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 2090 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 2130
>emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxylate synthetase Length = 2584 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1377 atccgtagtggaaatggtcttctgctgaagggtggaaa 1414 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1053 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1093
>emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxylate synthetase A Length = 2552 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1351 atccgtagtggaaatggtcttctgctgaagggtggaaa 1388 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1027 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1067
>gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5-carboxylase synthetase P5C1 (At2g39800) mRNA, complete cds Length = 2600 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1398 atccgtagtggaaatggtcttctgctgaagggtggaaa 1435 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1074 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1114
>gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2154 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1279 atccgtagtggaaatggtcttctgctgaagggtggaaa 1316 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 955 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 995
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 42834 atccgtagtggaaatggtcttctgctgaagggtggaaa 42797 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 43482 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 43442
>gb|AC087367.3| Homo sapiens chromosome 8, clone RP11-680O8, complete sequence Length = 133139 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 581 aaaaagcaaagaagaaattgct 602 |||||||||||||||||||||| Sbjct: 29945 aaaaagcaaagaagaaattgct 29924
>gb|AC026991.9| Homo sapiens, clone RP11-279L11, complete sequence Length = 169196 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 aaaaagcaaagaagaaattgct 602 |||||||||||||||||||||| Sbjct: 30057 aaaaagcaaagaagaaattgct 30078
>gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2630 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1398 atccgtagtggaaatggtcttctgctgaagggtggaaa 1435 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1074 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1114
>dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrroline-5-carboxylate synthase, complete cds Length = 2571 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 456 atccgaagtggaaatggtcttcttctgaaaggaggaaa 493 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 1385 atccgtagtggaaatggtcttctgctgaagggtggaaa 1422 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 132 aaaattttgctagatattgctgatgctctggaagcaaatgt 172 |||||| |||| |||||||| ||||| || ||||||||||| Sbjct: 1061 aaaattctgcttgatattgccgatgcccttgaagcaaatgt 1101
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2992 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 601 ctgatcttctaaagcttgacgatgtgattgatct 634 ||||||| || |||||||| |||||||||||||| Sbjct: 1609 ctgatctccttaagcttgatgatgtgattgatct 1642 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 459 cgaagtggaaatggtcttcttctgaaaggaggaaaagaagctatgagatcaaa 511 |||||||||||||| |||||| |||| || ||||| || || | ||||||||| Sbjct: 1467 cgaagtggaaatgggcttcttttgaagggtggaaaggaggcaaagagatcaaa 1519 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 135 attttgctagatattgctgatgctctggaagcaaatg 171 ||||||||||| || ||||||||| |||| ||||||| Sbjct: 1143 attttgctagacatagctgatgctttggaggcaaatg 1179
>gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosome 13, complete sequence Length = 211368 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 aaaagcaaagaagaaattgct 602 ||||||||||||||||||||| Sbjct: 75222 aaaagcaaagaagaaattgct 75202
>gb|AC009127.10| Homo sapiens chromosome 16 clone RP11-498D10, complete sequence Length = 173128 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aattttgctagatattgctga 154 ||||||||||||||||||||| Sbjct: 16600 aattttgctagatattgctga 16580
>emb|AL713984.7| Human DNA sequence from clone RP11-25C24 on chromosome 10, complete sequence Length = 161584 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 catctccagaatttgtcatca 119 ||||||||||||||||||||| Sbjct: 3053 catctccagaatttgtcatca 3073
>gb|AC046134.8| Homo sapiens 3 BAC RP11-553K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168949 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aattttgctagatattgctga 154 ||||||||||||||||||||| Sbjct: 130816 aattttgctagatattgctga 130796
>gb|AC067743.10| Homo sapiens chromosome 10 clone RP11-441P16, complete sequence Length = 177795 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 574 gccttgtaaaaagcaaagaagaaat 598 ||||| ||||||||||||||||||| Sbjct: 111290 gccttttaaaaagcaaagaagaaat 111314
>gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, complete sequence Length = 182913 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 catctccagaatttgtcatca 119 ||||||||||||||||||||| Sbjct: 148391 catctccagaatttgtcatca 148411
>gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, complete sequence Length = 182912 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 catctccagaatttgtcatca 119 ||||||||||||||||||||| Sbjct: 34517 catctccagaatttgtcatca 34497
>gb|AC096641.2| Homo sapiens chromosome 1 clone RP11-361K17, complete sequence Length = 185148 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 taattatagctgagaatgagg 198 ||||||||||||||||||||| Sbjct: 93553 taattatagctgagaatgagg 93533
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 572 tggccttgtaaaaagcaaaga 592 ||||||||||||||||||||| Sbjct: 61668 tggccttgtaaaaagcaaaga 61688
>gb|AC009087.4|AC009087 Homo sapiens chromosome 16 clone RP11-384M15, complete sequence Length = 174933 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aattttgctagatattgctga 154 ||||||||||||||||||||| Sbjct: 121590 aattttgctagatattgctga 121570
>emb|BX005473.5| Zebrafish DNA sequence from clone DKEY-148P7 in linkage group 1, complete sequence Length = 94966 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gcttttcctaatgaagcaaat 32 ||||||||||||||||||||| Sbjct: 92014 gcttttcctaatgaagcaaat 91994
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 agcaaagaagaaattgctgat 605 ||||||||||||||||||||| Sbjct: 436450 agcaaagaagaaattgctgat 436470
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 agcaaagaagaaattgctgat 605 ||||||||||||||||||||| Sbjct: 397112 agcaaagaagaaattgctgat 397132
>gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone hRPK.264_B_14, complete sequence Length = 120187 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 gtaaaaagcaaagaagaaatt 599 ||||||||||||||||||||| Sbjct: 100316 gtaaaaagcaaagaagaaatt 100336
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 572 tggccttgtaaaaagcaaaga 592 ||||||||||||||||||||| Sbjct: 197726 tggccttgtaaaaagcaaaga 197746
>gb|DQ213970.1| Taeniopygia guttata clone 0063P0027G01 RIKEN cDNA 1700025G04 variant 2-like mRNA, complete sequence Length = 1155 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 gtggaaatggtcttcttctg 482 |||||||||||||||||||| Sbjct: 533 gtggaaatggtcttcttctg 514
>ref|NM_001017306.2| Xenopus tropicalis hypothetical protein LOC550060 (LOC550060), mRNA Length = 3137 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 462 agtggaaatggtcttcttctgaaaggaggaaa 493 ||||| |||||| | ||||||||||||||||| Sbjct: 1560 agtgggaatggtttgcttctgaaaggaggaaa 1591
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 tgctgaatccattcgtgcaattgc 307 |||||||||| ||||||||||||| Sbjct: 35092 tgctgaatcctttcgtgcaattgc 35115
>ref|XM_458326.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C15939g) partial mRNA Length = 2187 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 gaagaaattgctgatcttct 610 |||||||||||||||||||| Sbjct: 2094 gaagaaattgctgatcttct 2075
>gb|AC121296.7| Mus musculus chromosome 14, clone RP23-286K8, complete sequence Length = 232049 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 tgggtttaattatagctgagaatg 195 ||||||||||||||||| |||||| Sbjct: 227212 tgggtttaattatagctcagaatg 227235
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atgagatcaaacacaatatt 520 |||||||||||||||||||| Sbjct: 23380476 atgagatcaaacacaatatt 23380495
>ref|XM_568519.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN00100) partial mRNA Length = 2106 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 tgctgaatccattcgtgcaattgc 307 |||||||||| ||||||||||||| Sbjct: 941 tgctgaatcctttcgtgcaattgc 918
>gb|AC132459.3| Mus musculus BAC clone RP23-152I2 from chromosome 14, complete sequence Length = 186486 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 tgggtttaattatagctgagaatg 195 ||||||||||||||||| |||||| Sbjct: 100944 tgggtttaattatagctcagaatg 100967
>emb|Z50797.1|CET22H6 Caenorhabditis elegans Cosmid T22H6, complete sequence Length = 39692 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 ggaaatggtcttcttctgaaaggaggaaaagaagct 500 ||||||| |||||||| || ||||||||||||||| Sbjct: 21421 ggaaatgcacttcttcttaagggaggaaaagaagct 21456
>ref|XM_862519.1| PREDICTED: Canis familiaris Ribosomal protein S14, transcript variant 4 (RPS14), mRNA Length = 551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ttctgaaaggaggaaaagaa 497 |||||||||||||||||||| Sbjct: 39 ttctgaaaggaggaaaagaa 20
>gb|U50068.2| Caenorhabditis elegans cosmid C01G5, complete sequence Length = 38627 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttcttctgaaaggaggaaaa 494 |||||||||||||||||||| Sbjct: 12371 ttcttctgaaaggaggaaaa 12390
>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence Length = 120384 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 taaaaagcaaagaagaaatt 599 |||||||||||||||||||| Sbjct: 100998 taaaaagcaaagaagaaatt 100979
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence Length = 130592 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 taaaaagcaaagaagaaatt 599 |||||||||||||||||||| Sbjct: 50451 taaaaagcaaagaagaaatt 50432
>emb|AL354699.11| Human DNA sequence from clone RP11-349E20 on chromosome 1, complete sequence Length = 81483 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 taaaaagcaaagaagaaatt 599 |||||||||||||||||||| Sbjct: 56342 taaaaagcaaagaagaaatt 56361
>emb|AL158828.14| Human DNA sequence from clone RP11-359J6 on chromosome 9 Contains a novel gene and a novel pseudogene, complete sequence Length = 213728 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tgaagcaaatgtctgggatt 42 |||||||||||||||||||| Sbjct: 109923 tgaagcaaatgtctgggatt 109942
>ref|XM_964329.1| PREDICTED: Tribolium castaneum similar to dynein, axonemal, heavy polypeptide 3 (LOC657902), mRNA Length = 12207 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agatggcagttgctgcaaaa 86 |||||||||||||||||||| Sbjct: 4400 agatggcagttgctgcaaaa 4419
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 gaagaaattgctgatcttct 610 |||||||||||||||||||| Sbjct: 1302724 gaagaaattgctgatcttct 1302743
>gb|AF165144.4| Homo sapiens chromosome 8 clone CTA-393A7 map 8cen, complete sequence Length = 110994 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 aaagaagaaattgctgatcttcta 611 ||||||||||||| |||||||||| Sbjct: 46542 aaagaagaaattggtgatcttcta 46565
>gb|AC022681.8| Homo sapiens chromosome 8, clone RP11-731D24, complete sequence Length = 219658 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ctaaggatttagtatttgag 374 |||||||||||||||||||| Sbjct: 52868 ctaaggatttagtatttgag 52887
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22, complete sequence Length = 181178 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 ccagcgtgattccagatggt 554 |||||||||||||||||||| Sbjct: 146789 ccagcgtgattccagatggt 146808
>ref|NM_077731.2| Caenorhabditis elegans T22H6.2b (T22H6.2) mRNA, complete cds Length = 2424 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 ggaaatggtcttcttctgaaaggaggaaaagaagct 500 ||||||| |||||||| || ||||||||||||||| Sbjct: 1489 ggaaatgcacttcttcttaagggaggaaaagaagct 1524
>ref|NM_077732.3| Caenorhabditis elegans T22H6.2a (T22H6.2) mRNA, complete cds Length = 2546 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 465 ggaaatggtcttcttctgaaaggaggaaaagaagct 500 ||||||| |||||||| || ||||||||||||||| Sbjct: 1483 ggaaatgcacttcttcttaagggaggaaaagaagct 1518
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atgagatcaaacacaatatt 520 |||||||||||||||||||| Sbjct: 23373504 atgagatcaaacacaatatt 23373523
>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217112 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 aggatgaccctgaaggcagg 268 |||||||||||||||||||| Sbjct: 58607 aggatgaccctgaaggcagg 58626
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence Length = 137557 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 aaaaagcaaagaagaaattg 600 |||||||||||||||||||| Sbjct: 44173 aaaaagcaaagaagaaattg 44154
>gb|AC108514.3| Homo sapiens BAC clone RP11-234L7 from 2, complete sequence Length = 97944 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 aggatttagtatttgagaag 377 |||||||||||||||||||| Sbjct: 88547 aggatttagtatttgagaag 88566
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atgagatcaaacacaatatt 520 |||||||||||||||||||| Sbjct: 63132 atgagatcaaacacaatatt 63151
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tgacgatgtgattgatcttg 636 |||||||||||||||||||| Sbjct: 677221 tgacgatgtgattgatcttg 677202
>emb|AL928649.7| Zebrafish DNA sequence from clone DKEY-71J7, complete sequence Length = 208129 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cggcacaagatgcaggctat 230 |||||||||||||||||||| Sbjct: 129271 cggcacaagatgcaggctat 129290
>gb|AC111056.20| Mus musculus chromosome 3, clone RP24-537K9, complete sequence Length = 165443 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 gcttttcctaatgaagcaaatgtctggg 39 |||||||| ||||||| ||||||||||| Sbjct: 34958 gcttttcccaatgaagtaaatgtctggg 34985
>emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in linkage group 10, complete sequence Length = 211740 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tggtacgcttttcctaatga 25 |||||||||||||||||||| Sbjct: 147682 tggtacgcttttcctaatga 147663
>emb|CR855539.2| Xenopus tropicalis finished cDNA, clone TEgg047n01 Length = 3137 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 462 agtggaaatggtcttcttctgaaaggaggaaa 493 ||||| |||||| | ||||||||||||||||| Sbjct: 1560 agtgggaatggtttgcttctgaaaggaggaaa 1591
>emb|BX469932.7| Mouse DNA sequence from clone RP23-391L6 on chromosome X, complete sequence Length = 116319 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aggaaaagaagctatgagat 507 |||||||||||||||||||| Sbjct: 104463 aggaaaagaagctatgagat 104482
>gb|U59426.1|OTU59426 Oxytricha trifallax DNA polymerase alpha catalytic subunit gene, complete cds Length = 5007 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gaaaattttgctagatattg 150 |||||||||||||||||||| Sbjct: 4040 gaaaattttgctagatattg 4059
>dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11J24, TM0185, complete sequence Length = 121047 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 460 gaagtggaaatggtcttcttctgaaaggaggaaaagaagc 499 |||||||||||||| | || || ||||||||||| ||||| Sbjct: 61332 gaagtggaaatggtttactgcttaaaggaggaaaggaagc 61371 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,140,923 Number of Sequences: 3902068 Number of extensions: 6140923 Number of successful extensions: 124576 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124052 Number of HSP's gapped (non-prelim): 506 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
