| Clone Name | baal18l10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 65.9 bits (33), Expect = 7e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 213 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 272 ||||||||||||| |||||| |||||||||| ||||||||| ||| |||||| || || Sbjct: 659 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 718 Query: 273 tttcagcatacta 285 ||||| ||||||| Sbjct: 719 tttcaccatacta 731 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 32 agatcatactccccctatggaaggaggccatcctactccccctatgaaaggaggccatcc 91 ||||||||||||||||||| ||| | ||||||||| || |||||||||| | ||| Sbjct: 487 agatcatactccccctatgagaggcgtagatcctactctccacatgaaaggagacagtcc 546 Query: 92 tactctccctatggcaga 109 |||||||| ||||||||| Sbjct: 547 tactctccgtatggcaga 564
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 7e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 213 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 272 ||||||||||||| |||||| |||||||||| ||||||||| ||| |||||| || || Sbjct: 8740436 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 8740377 Query: 273 tttcagcatacta 285 ||||| ||||||| Sbjct: 8740376 tttcaccatacta 8740364 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 32 agatcatactccccctatggaaggaggccatcctactccccctatgaaaggaggccatcc 91 ||||||||||||||||||| ||| | ||||||||| || |||||||||| | ||| Sbjct: 8740608 agatcatactccccctatgagaggcgtagatcctactctccacatgaaaggagacagtcc 8740549 Query: 92 tactctccctatggcaga 109 |||||||| ||||||||| Sbjct: 8740548 tactctccgtatggcaga 8740531
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 65.9 bits (33), Expect = 7e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 213 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 272 ||||||||||||| |||||| |||||||||| ||||||||| ||| |||||| || || Sbjct: 84087 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 84028 Query: 273 tttcagcatacta 285 ||||| ||||||| Sbjct: 84027 tttcaccatacta 84015 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 32 agatcatactccccctatggaaggaggccatcctactccccctatgaaaggaggccatcc 91 ||||||||||||||||||| ||| | ||||||||| || |||||||||| | ||| Sbjct: 84259 agatcatactccccctatgagaggcgtagatcctactctccacatgaaaggagacagtcc 84200 Query: 92 tactctccctatggcaga 109 |||||||| ||||||||| Sbjct: 84199 tactctccgtatggcaga 84182
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 7e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 213 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 272 ||||||||||||| |||||| |||||||||| ||||||||| ||| |||||| || || Sbjct: 8738271 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 8738212 Query: 273 tttcagcatacta 285 ||||| ||||||| Sbjct: 8738211 tttcaccatacta 8738199 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 32 agatcatactccccctatggaaggaggccatcctactccccctatgaaaggaggccatcc 91 ||||||||||||||||||| ||| | ||||||||| || |||||||||| | ||| Sbjct: 8738443 agatcatactccccctatgagaggcgtagatcctactctccacatgaaaggagacagtcc 8738384 Query: 92 tactctccctatggcaga 109 |||||||| ||||||||| Sbjct: 8738383 tactctccgtatggcaga 8738366
>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full insert sequence Length = 1438 Score = 65.9 bits (33), Expect = 7e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 213 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 272 ||||||||||||| |||||| |||||||||| ||||||||| ||| |||||| || || Sbjct: 918 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 977 Query: 273 tttcagcatacta 285 ||||| ||||||| Sbjct: 978 tttcaccatacta 990 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 32 agatcatactccccctatggaaggaggccatcctactccccctatgaaaggaggccatcc 91 ||||||||||||||||||| ||| | ||||||||| || |||||||||| | ||| Sbjct: 746 agatcatactccccctatgagaggcgtagatcctactctccacatgaaaggagacagtcc 805 Query: 92 tactctccctatggcaga 109 |||||||| ||||||||| Sbjct: 806 tactctccgtatggcaga 823
>gb|AY105790.1| Zea mays PCO079761 mRNA sequence Length = 1402 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 92 tactctccctatggcagaaggagatcatactctcctt 128 |||||||| |||| ||||||| ||||||||||||||| Sbjct: 826 tactctccatatgacagaaggcgatcatactctcctt 862
>gb|BT018387.1| Zea mays clone EL01N0313G10.d mRNA sequence Length = 1493 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 92 tactctccctatggcagaaggagatcatactctcc 126 |||||||| |||| ||||||| ||||||||||||| Sbjct: 907 tactctccatatgacagaaggcgatcatactctcc 941
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ccgacaggtcggagtctccc 148 |||||||||||||||||||| Sbjct: 754222 ccgacaggtcggagtctccc 754241
>gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosome 19, complete sequence Length = 217325 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atcctactccccctatgaaa 80 |||||||||||||||||||| Sbjct: 149635 atcctactccccctatgaaa 149654
>dbj|AK031666.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030476O14 product:similar to MYOFERLIN (FER-1 LIKE PROTEIN 3) [Homo sapiens], full insert sequence Length = 3927 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atcctactccccctatgaaa 80 |||||||||||||||||||| Sbjct: 3832 atcctactccccctatgaaa 3813
>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence Length = 209547 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atcctactccccctatgaaa 80 |||||||||||||||||||| Sbjct: 150320 atcctactccccctatgaaa 150301 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,457,638 Number of Sequences: 3902068 Number of extensions: 1457638 Number of successful extensions: 24956 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24902 Number of HSP's gapped (non-prelim): 44 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)