| Clone Name | baal18k11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence Length = 1732 Score = 75.8 bits (38), Expect = 3e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 49 agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 108 |||||||||||||| | ||||||||| ||||| | || || || || ||||| ||||||| Sbjct: 374 agtgggaggacaggatggcccgaggcttattccgctacgatgtcactgcctgtgagacca 433 Query: 109 aggtgattcctggcgagcttgggtttgttgcaca 142 |||| || |||||| | ||||||||||||||||| Sbjct: 434 aggtcatccctggcaaccttgggtttgttgcaca 467
>gb|AY105327.1| Zea mays PCO147247 mRNA sequence Length = 1954 Score = 67.9 bits (34), Expect = 8e-09 Identities = 79/94 (84%) Strand = Plus / Plus Query: 49 agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 108 |||||||||||||| | | |||||| ||||| | || || || || ||||| ||||||| Sbjct: 632 agtgggaggacaggatgactcgaggcttattccgctacgatgtcactgcctgtgagacca 691 Query: 109 aggtgattcctggcgagcttgggtttgttgcaca 142 |||| ||||||||| | ||||||||||||||||| Sbjct: 692 aggtcattcctggcaaccttgggtttgttgcaca 725
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 5e-07 Identities = 79/95 (83%) Strand = Plus / Minus Query: 48 cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 107 |||||||| |||||| | |||||||| | ||| ||||||| || || ||||| |||||| Sbjct: 4534249 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534190 Query: 108 aaggtgattcctggcgagcttgggtttgttgcaca 142 ||||| || || ||| | ||||||||||||||||| Sbjct: 4534189 aaggttatcccaggcaaccttgggtttgttgcaca 4534155
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 5e-07 Identities = 79/95 (83%) Strand = Plus / Minus Query: 48 cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 107 |||||||| |||||| | |||||||| | ||| ||||||| || || ||||| |||||| Sbjct: 4534230 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534171 Query: 108 aaggtgattcctggcgagcttgggtttgttgcaca 142 ||||| || || ||| | ||||||||||||||||| Sbjct: 4534170 aaggttatcccaggcaaccttgggtttgttgcaca 4534136
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 61.9 bits (31), Expect = 5e-07 Identities = 79/95 (83%) Strand = Plus / Plus Query: 48 cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 107 |||||||| |||||| | |||||||| | ||| ||||||| || || ||||| |||||| Sbjct: 70529 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 70588 Query: 108 aaggtgattcctggcgagcttgggtttgttgcaca 142 ||||| || || ||| | ||||||||||||||||| Sbjct: 70589 aaggttatcccaggcaaccttgggtttgttgcaca 70623
>dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M14, full insert sequence Length = 2088 Score = 50.1 bits (25), Expect = 0.002 Identities = 52/61 (85%) Strand = Plus / Plus Query: 82 gatatgacgtaacagcctgcgagaccaaggtgattcctggcgagcttgggtttgttgcac 141 ||||||| || || ||||| ||||||||||| || || ||| | |||||||||||||||| Sbjct: 704 gatatgatgtcactgcctgtgagaccaaggttatcccaggcaaccttgggtttgttgcac 763 Query: 142 a 142 | Sbjct: 764 a 764
>gb|AY489190.1| Capsicum annuum putative At4g26850-like protein mRNA, complete sequence Length = 589 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Plus Query: 96 gcctgcgagaccaaggtgattcctgg 121 |||||||| ||||||||||||||||| Sbjct: 399 gcctgcgaaaccaaggtgattcctgg 424
>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence Length = 123565 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 actgagttcttcctcaattctctc 38 |||||||| ||||||||||||||| Sbjct: 79670 actgagtttttcctcaattctctc 79693
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7, complete sequence Length = 147943 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gagctccctactgagttctt 25 |||||||||||||||||||| Sbjct: 60496 gagctccctactgagttctt 60515
>gb|AC120875.12| Mus musculus chromosome 1, clone RP23-317M5, complete sequence Length = 195159 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 92681 tcttcctcaatgctctcctcctc 92703
>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3, complete sequence Length = 209530 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 gggtttgttgcacagctta 147 ||||||||||||||||||| Sbjct: 102763 gggtttgttgcacagctta 102781
>ref|XM_979952.1| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1 (Camsap1l1), mRNA Length = 7688 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2004 tcttcctcaatgctctcctcctc 1982
>ref|XM_924051.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 12 (Camsap1l1), mRNA Length = 4439 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_924058.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 16 (Camsap1l1), mRNA Length = 7823 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2139 tcttcctcaatgctctcctcctc 2117
>ref|XM_924052.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 13 (Camsap1l1), mRNA Length = 7814 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_924054.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 15 (Camsap1l1), mRNA Length = 7799 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_924045.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 10 (Camsap1l1), mRNA Length = 7772 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_916022.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 9 (Camsap1l1), mRNA Length = 7805 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_899101.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 4 (Camsap1l1), mRNA Length = 4439 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>ref|XM_899121.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 8 (Camsap1l1), mRNA Length = 7823 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2139 tcttcctcaatgctctcctcctc 2117
>ref|XM_899106.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 5 (Camsap1l1), mRNA Length = 7814 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_899116.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 7 (Camsap1l1), mRNA Length = 7799 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_899089.2| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 2 (Camsap1l1), mRNA Length = 7772 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2088 tcttcctcaatgctctcctcctc 2066
>ref|XM_129477.9| PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1-like 1, transcript variant 1 (Camsap1l1), mRNA Length = 7805 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2121 tcttcctcaatgctctcctcctc 2099
>gb|AC137877.6| Mus musculus chromosome 10, clone RP23-72A1, complete sequence Length = 172812 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 ttcctcaattctctcctcc 42 ||||||||||||||||||| Sbjct: 139515 ttcctcaattctctcctcc 139497
>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete sequence Length = 185609 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 cacagtgggaggacagggt 64 ||||||||||||||||||| Sbjct: 112824 cacagtgggaggacagggt 112806
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 ttcctcaattctctcctcc 42 ||||||||||||||||||| Sbjct: 88413 ttcctcaattctctcctcc 88395
>gb|AC021698.12| Homo sapiens chromosome 11, clone RP11-430L3, complete sequence Length = 201673 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 gggtttgttgcacagctta 147 ||||||||||||||||||| Sbjct: 22061 gggtttgttgcacagctta 22079
>dbj|AK137176.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530028C17 product:unclassifiable, full insert sequence Length = 4372 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 cacagtgggaggacagggt 64 ||||||||||||||||||| Sbjct: 2091 cacagtgggaggacagggt 2109
>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence Length = 164009 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 129 gggtttgttgcacagctta 147 ||||||||||||||||||| Sbjct: 10574 gggtttgttgcacagctta 10556
>dbj|AK028542.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632425I16 product:hypothetical Calponin-homology domain, CH-domain structure containing protein, full insert sequence Length = 4222 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 tcttcctcaattctctcctcctc 44 ||||||||||| ||||||||||| Sbjct: 2089 tcttcctcaatgctctcctcctc 2067
>gb|AC087318.33| Homo sapiens 12 BAC RP11-73M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104647 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 gcacagtgggaggacaggg 63 ||||||||||||||||||| Sbjct: 52388 gcacagtgggaggacaggg 52370
>gb|AC004148.1|AC004148 Homo sapiens chromosome 17, clone HCIT524C5, complete sequence Length = 118276 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ctccctactgagttcttcc 27 ||||||||||||||||||| Sbjct: 93598 ctccctactgagttcttcc 93616
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ttcttcctcaattctctcc 39 ||||||||||||||||||| Sbjct: 37318 ttcttcctcaattctctcc 37300
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 tcaattctctcctcctcgc 46 ||||||||||||||||||| Sbjct: 131905 tcaattctctcctcctcgc 131923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,082,623 Number of Sequences: 3902068 Number of extensions: 1082623 Number of successful extensions: 73615 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73522 Number of HSP's gapped (non-prelim): 93 length of query: 149 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 128 effective length of database: 17,151,101,840 effective search space: 2195341035520 effective search space used: 2195341035520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)