ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
3dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
4dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 147 2e-32
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 147 2e-32
7emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 147 2e-32
8emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 147 2e-32
9dbj|AK062121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 8e-20
10gb|AC157564.11| Mus musculus chromosome 8, clone RP23-363J16, co... 44 0.24
11gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, com... 44 0.24
12emb|CR931957.6| Mouse DNA sequence from clone RP23-21C14 on chro... 44 0.24
13gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosom... 44 0.24
14gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, com... 44 0.24
15gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 44 0.24
16gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome... 44 0.24
17gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosom... 44 0.24
18gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, com... 44 0.24
19gb|AC113288.7| Mus musculus chromosome 5, clone RP23-414I12, com... 44 0.24
20gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosom... 42 0.94
21gb|AC115884.9| Mus musculus chromosome 18, clone RP24-396H6, com... 42 0.94
22gb|AY395719.1| Salvia splendens anthocyanin 3-O-glucoside-6''-O-... 42 0.94
23gb|AC161874.3| Mus musculus BAC clone RP24-177G20 from chromosom... 42 0.94
24ref|XM_313322.2| Anopheles gambiae str. PEST ENSANGP00000010432 ... 42 0.94
25ref|XM_313321.1| Anopheles gambiae str. PEST ENSANGP00000024075 ... 42 0.94
26emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on ch... 42 0.94
27emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on ch... 42 0.94
28gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, com... 40 3.7
29gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome... 40 3.7
30gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom... 40 3.7
31gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, com... 40 3.7
32gb|AC134471.3| Mus musculus BAC clone RP23-121J12 from chromosom... 40 3.7
33gb|AC111029.8| Mus musculus chromosome 3, clone RP23-235E15, com... 40 3.7
34gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Can... 40 3.7
35gb|AC140782.4| Mus musculus BAC clone RP24-417N13 from chromosom... 40 3.7
36gb|AC127414.4| Mus musculus BAC clone RP23-246P24 from chromosom... 40 3.7
37gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, compl... 40 3.7
38gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, compl... 40 3.7
39gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, com... 40 3.7
40emb|AJ630128.1| Bacteriophage S-PM2 complete genome 40 3.7
41gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome... 40 3.7
42gb|AF367967.1|AF367967S1 Mus musculus survival of motor neuron p... 40 3.7
43gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, com... 40 3.7
44gb|AF131205.1|AF131205 Mus musculus Serf1 protein (Serf1), survi... 40 3.7
45gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 40 3.7
46gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome ... 40 3.7
47emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chr... 40 3.7
48gb|AC142256.4| Mus musculus BAC clone RP24-528N23 from 3, comple... 40 3.7
49emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on ch... 40 3.7
50emb|AL772199.11| Mouse DNA sequence from clone RP23-86J22 on chr... 40 3.7
51gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4... 40 3.7
52gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, com... 40 3.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                          
Query: 21     gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
              ||||| |||||||||||||||||||| || |||||||| |||| |||  |||| || |||
Sbjct: 275721 gatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgct 275662

                                                                          
Query: 81     gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
              ||||| ||||||||||||||||||||  ||||||| || || || |||||||||||||| 
Sbjct: 275661 gatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggca 275602

                                                                          
Query: 141    ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
              |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 275601 ataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 275542

                                                                   
Query: 201    ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
               | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 275541 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 275489
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                          
Query: 21     gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
              ||||| ||||||||||||||||||||||| |||||||| |||| |||  |||| || |||
Sbjct: 257980 gatgaggcaaatgttgcatcttcattccatttgatgtcaaagactgtacaaggttttgct 257921

                                                                          
Query: 81     gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
              ||||| ||||||||||||||||||||  ||||||| ||||| || |||||||||||||  
Sbjct: 257920 gatgacaagtatcccgcttacaaagataggcataaacttgccacagaacgggagaaggta 257861

                                                                          
Query: 141    ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
              ||||||||||| |||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 257860 ataaaagagaaagccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 257801

                                                                   
Query: 201    ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
               | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 257800 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 257748
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>dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051M04, full
            insert sequence
          Length = 3065

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Plus

                                                                        
Query: 21   gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
            ||||| |||||||||||||||||||| || |||||||| |||| |||  |||| || |||
Sbjct: 1532 gatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgct 1591

                                                                        
Query: 81   gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
            ||||| ||||||||||||||||||||  ||||||| || || || |||||||||||||| 
Sbjct: 1592 gatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggca 1651

                                                                        
Query: 141  ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
            |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 1652 ataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 1711

                                                                 
Query: 201  ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
             | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 1712 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 1764
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>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full
            insert sequence
          Length = 3183

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Plus

                                                                        
Query: 21   gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
            ||||| |||||||||||||||||||| || |||||||| |||| |||  |||| || |||
Sbjct: 1647 gatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgct 1706

                                                                        
Query: 81   gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
            ||||| ||||||||||||||||||||  ||||||| || || || |||||||||||||| 
Sbjct: 1707 gatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggca 1766

                                                                        
Query: 141  ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
            |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 1767 ataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 1826

                                                                 
Query: 201  ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
             | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 1827 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 1879
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                          
Query: 21     gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
              ||||| ||||||||||||||||||||||| |||||||| |||| |||  |||| || |||
Sbjct: 257980 gatgaggcaaatgttgcatcttcattccatttgatgtcaaagactgtacaaggttttgct 257921

                                                                          
Query: 81     gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
              ||||| ||||||||||||||||||||  ||||||| ||||| || |||||||||||||  
Sbjct: 257920 gatgacaagtatcccgcttacaaagataggcataaacttgccacagaacgggagaaggta 257861

                                                                          
Query: 141    ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
              ||||||||||| |||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 257860 ataaaagagaaagccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 257801

                                                                   
Query: 201    ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
               | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 257800 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 257748
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                          
Query: 21     gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
              ||||| |||||||||||||||||||| || |||||||| |||| |||  |||| || |||
Sbjct: 275721 gatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgct 275662

                                                                          
Query: 81     gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
              ||||| ||||||||||||||||||||  ||||||| || || || |||||||||||||| 
Sbjct: 275661 gatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggca 275602

                                                                          
Query: 141    ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
              |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 275601 ataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 275542

                                                                   
Query: 201    ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
               | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 275541 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 275489
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Plus

                                                                         
Query: 21    gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
             ||||| ||||||||||||||||||||||| |||||||| |||| |||  |||| || |||
Sbjct: 47013 gatgaggcaaatgttgcatcttcattccatttgatgtcaaagactgtacaaggttttgct 47072

                                                                         
Query: 81    gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
             ||||| ||||||||||||||||||||  ||||||| ||||| || |||||||||||||  
Sbjct: 47073 gatgacaagtatcccgcttacaaagataggcataaacttgccacagaacgggagaaggta 47132

                                                                         
Query: 141   ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
             ||||||||||| |||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 47133 ataaaagagaaagccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 47192

                                                                  
Query: 201   ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
              | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 47193 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 47245
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 152222

 Score =  147 bits (74), Expect = 2e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                        
Query: 21   gatgatgcaaatgttgcatcttcattccagttgatgtcgaagaatgttgaaggcttcgct 80
            ||||| |||||||||||||||||||| || |||||||| |||| |||  |||| || |||
Sbjct: 8772 gatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgct 8713

                                                                        
Query: 81   gatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaaggcg 140
            ||||| ||||||||||||||||||||  ||||||| || || || |||||||||||||| 
Sbjct: 8712 gatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggca 8653

                                                                        
Query: 141  ataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttcagct 200
            |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||| |
Sbjct: 8652 ataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggt 8593

                                                                 
Query: 201  ctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
             | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 8592 attgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 8540
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>dbj|AK062121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D01, full
           insert sequence
          Length = 1478

 Score =  105 bits (53), Expect = 8e-20
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                       
Query: 78  gctgatgaaaagtatcccgcttacaaagaccggcataagcttgcgacggaacgggagaag 137
           |||||||| ||||||||||||||||||||  ||||||| || || || ||||||||||||
Sbjct: 2   gctgatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaag 61

                                                                       
Query: 138 gcgataaaagagaaggccgagcaagccagagcacaaaggtttggnggtggctatagttca 197
           || |||||||||||||||||| |||| || | |||||| | ||| |||| | | ||||||
Sbjct: 62  gcaataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttca 121

                                                                   
Query: 198 gctctagctccttccccgagagctgcacttccccccaaactcgctcaaataaagga 253
           | | | |  || || || ||| ||||||| || || ||||| ||||||||||||||
Sbjct: 122 ggtattgtgccatctccaagatctgcactccctccaaaacttgctcaaataaagga 177
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>gb|AC157564.11| Mus musculus chromosome 8, clone RP23-363J16, complete sequence
          Length = 216585

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 141    ataaaagagaaggccgagcaagccagagca 170
              |||| ||||||||| |||||||||||||||
Sbjct: 127453 ataagagagaaggctgagcaagccagagca 127424
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>gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, complete sequence
          Length = 176468

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ataaaagagaaggccgagcaagccag 166
             ||||||||| ||||||||||||||||
Sbjct: 87201 ataaaagagcaggccgagcaagccag 87226
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>emb|CR931957.6| Mouse DNA sequence from clone RP23-21C14 on chromosome 2, complete
             sequence
          Length = 89566

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ataaaagagaaggccgagcaagccag 166
             |||||||||||||| |||||||||||
Sbjct: 13920 ataaaagagaaggctgagcaagccag 13945
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>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete
             sequence
          Length = 181163

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 141   ataaaagagaaggccgagcaagccag 166
             |||||||||||||| |||||||||||
Sbjct: 76248 ataaaagagaaggctgagcaagccag 76223
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>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence
          Length = 142377

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ataaaagagaaggccgagcaagccag 166
             |||||||||||||| |||||||||||
Sbjct: 13627 ataaaagagaaggctgagcaagccag 13652
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>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
             sequence
          Length = 146998

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ataaaagagaaggccgagcaagccag 166
             ||||||||| ||||||||||||||||
Sbjct: 27711 ataaaagagcaggccgagcaagccag 27736
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>gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome 12, complete sequence
          Length = 159497

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 141   ataaaagagaaggccgagcaagccagagca 170
             ||||||||| |||| |||||||||||||||
Sbjct: 40837 ataaaagagcaggctgagcaagccagagca 40808
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>gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosome 12, complete sequence
          Length = 158411

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 141    ataaaagagaaggccgagcaagccagagca 170
              ||||||||| |||| |||||||||||||||
Sbjct: 138314 ataaaagagcaggctgagcaagccagagca 138285
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>gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, complete sequence
          Length = 170602

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 141    ataaaagagaaggccgagcaagccag 166
              ||||||||| ||||||||||||||||
Sbjct: 136504 ataaaagagcaggccgagcaagccag 136529
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>gb|AC113288.7| Mus musculus chromosome 5, clone RP23-414I12, complete sequence
          Length = 185599

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 141    ataaaagagaaggccgagcaagccag 166
              |||||||||||||| |||||||||||
Sbjct: 177517 ataaaagagaaggctgagcaagccag 177542
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>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    gataaaagagaaggccgagcaagcc 164
              |||||||||||||||| ||||||||
Sbjct: 105085 gataaaagagaaggcccagcaagcc 105061
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>gb|AC115884.9| Mus musculus chromosome 18, clone RP24-396H6, complete sequence
          Length = 192449

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    agagaaggccgagcaagccag 166
              |||||||||||||||||||||
Sbjct: 163205 agagaaggccgagcaagccag 163225
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>gb|AY395719.1| Salvia splendens anthocyanin
           3-O-glucoside-6''-O-hydroxycinnamoyltransferase mRNA,
           complete cds
          Length = 1505

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  ccagttgatgtcgaagaatgt 67
           |||||||||||||||||||||
Sbjct: 100 ccagttgatgtcgaagaatgt 80
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>gb|AC161874.3| Mus musculus BAC clone RP24-177G20 from chromosome 18, complete sequence
          Length = 170891

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    agagaaggccgagcaagccag 166
              |||||||||||||||||||||
Sbjct: 106847 agagaaggccgagcaagccag 106867
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>ref|XM_313322.2| Anopheles gambiae str. PEST ENSANGP00000010432
           (ENSANGG00000007943), partial mRNA
          Length = 1260

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  tgaaggcttcgctgatgaaaa 88
           |||||||||||||||||||||
Sbjct: 335 tgaaggcttcgctgatgaaaa 355
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>ref|XM_313321.1| Anopheles gambiae str. PEST ENSANGP00000024075
           (ENSANGG00000007943), partial mRNA
          Length = 601

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  tgaaggcttcgctgatgaaaa 88
           |||||||||||||||||||||
Sbjct: 561 tgaaggcttcgctgatgaaaa 581
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>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
             sequence
          Length = 220149

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   gataaaagagaaggccgagcaagcc 164
             |||||||||||||||| ||||||||
Sbjct: 79953 gataaaagagaaggcccagcaagcc 79929
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>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete
             sequence
          Length = 153847

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 141   ataaaagagaaggccgagcaagcca 165
             |||||||||||||| ||||||||||
Sbjct: 51291 ataaaagagaaggctgagcaagcca 51267
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>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence
          Length = 172330

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              |||| ||||||||| |||||||||||||
Sbjct: 100767 ataagagagaaggctgagcaagccagag 100794
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>gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome 13, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 77856 ataaaagagcaggctgagcaagccagag 77883
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>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 116743 ataaaagagcaggctgagcaagccagag 116716
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>gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, complete sequence
          Length = 134271

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 62596 ataaaagagcaggctgagcaagccagag 62569
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>gb|AC134471.3| Mus musculus BAC clone RP23-121J12 from chromosome 17, complete sequence
          Length = 176628

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              |||| ||||||||| |||||||||||||
Sbjct: 125797 ataagagagaaggctgagcaagccagag 125824
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>gb|AC111029.8| Mus musculus chromosome 3, clone RP23-235E15, complete sequence
          Length = 196520

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             |||| ||||||||| |||||||||||||
Sbjct: 75484 ataagagagaaggctgagcaagccagag 75511
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>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208555

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    cagctctagctccttccccg 215
              ||||||||||||||||||||
Sbjct: 119304 cagctctagctccttccccg 119285
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>gb|AC140782.4| Mus musculus BAC clone RP24-417N13 from chromosome 7, complete sequence
          Length = 196282

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   agagaaggccgagcaagcca 165
             ||||||||||||||||||||
Sbjct: 94729 agagaaggccgagcaagcca 94710
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>gb|AC127414.4| Mus musculus BAC clone RP23-246P24 from chromosome 7, complete sequence
          Length = 218222

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   agagaaggccgagcaagcca 165
             ||||||||||||||||||||
Sbjct: 66907 agagaaggccgagcaagcca 66888
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>gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, complete sequence
          Length = 180560

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 79162 ataaaagagcaggctgagcaagccagag 79135
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>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence
          Length = 207129

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 198280 ataaaagagcaggctgagcaagccagag 198307
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>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence
          Length = 204358

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 137724 ataaaagagcaggctgagcaagccagag 137697
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>emb|AJ630128.1| Bacteriophage S-PM2 complete genome
          Length = 196280

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   caaactcgctcaaataaaggagaa 256
             |||||||||| |||||||||||||
Sbjct: 96166 caaactcgcttaaataaaggagaa 96189
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>gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome 3, complete sequence
          Length = 166094

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 86799 ataaaagagcaggctgagcaagccagag 86772



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 85306 ataaaagagcaggctgagcaagccagag 85279
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>gb|AF367967.1|AF367967S1 Mus musculus survival of motor neuron protein (Smn) gene, partial cds;
             and neuronal apoptosis inhibitory protein 2 (Naip2) gene,
             exon 16
          Length = 20021

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 13566 ataaaagagcaggctgagcaagccagag 13593
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>gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, complete sequence
          Length = 156901

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 148189 ataaaagagcaggctgagcaagccagag 148162
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>gb|AF131205.1|AF131205 Mus musculus Serf1 protein (Serf1), survival of motor neuron protein
             (Smn), neuronal apoptosis inhibitory protein-rs6
             (Naip-rs6), and neuronal apoptosis inhibitory protein-rs3
             (Naip-rs3) genes, complete cds
          Length = 179252

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 64597 ataaaagagcaggctgagcaagccagag 64624
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>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 185284 ataaaagagcaggctgagcaagccagag 185257
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>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence
          Length = 228881

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 107351 ataaaagagcaggctgagcaagccagag 107378
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>emb|CT030167.8| Mouse DNA sequence from clone RP23-333E24 on chromosome 13, complete
              sequence
          Length = 192930

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              ||||||||| |||| |||||||||||||
Sbjct: 119550 ataaaagagcaggctgagcaagccagag 119577
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>gb|AC142256.4| Mus musculus BAC clone RP24-528N23 from 3, complete sequence
          Length = 183488

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              |||| ||||||||| |||||||||||||
Sbjct: 100572 ataagagagaaggctgagcaagccagag 100599
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>emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on chromosome 4, complete
             sequence
          Length = 185592

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 75885 ataaaagagcaggctgagcaagccagag 75858
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>emb|AL772199.11| Mouse DNA sequence from clone RP23-86J22 on chromosome 4, complete
             sequence
          Length = 228292

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 141   ataaaagagaaggccgagcaagccagag 168
             ||||||||| |||| |||||||||||||
Sbjct: 31985 ataaaagagcaggctgagcaagccagag 31958
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>gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gacatagatgatgcaaatgt 34
             ||||||||||||||||||||
Sbjct: 10435 gacatagatgatgcaaatgt 10416
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>gb|AC100244.12| Mus musculus chromosome 8, clone RP23-64K12, complete sequence
          Length = 212430

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 141    ataaaagagaaggccgagcaagccagag 168
              |||| ||||||||| |||||||||||||
Sbjct: 189558 ataagagagaaggctgagcaagccagag 189585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,260,542
Number of Sequences: 3902068
Number of extensions: 2260542
Number of successful extensions: 49889
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49749
Number of HSP's gapped (non-prelim): 131
length of query: 285
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 263
effective length of database: 17,147,199,772
effective search space: 4509713540036
effective search space used: 4509713540036
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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