>AGO1_SCHPO (O74957) Cell cycle control protein ago1 (RNA interference pathway|
           protein ago1)
          Length = 834

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 136 GGGSKAWRGVYQPNDDKLQFFYDGQGFMSLQLNKDQADFIFYDVSGKVLYEWT 294
           GGG +AW+G YQ            QGFMS+ ++   + F   D   ++L E+T
Sbjct: 174 GGGVEAWKGFYQS-------IRPNQGFMSVNVDISSSAFWRNDSLLQILMEYT 219

>RPOC_PSEF5 (Q4K527) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1399

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 144 TASTSEVLDWTVSAANVFQAVVMPIDVEVDAVNLEDRKKQLQELL 10
           + S + ++D TV  A +FQ  V+P  +  D VNL  +KK + +L+
Sbjct: 563 SVSATRIVDTTVGRALLFQ--VVPKGLSFDVVNLPMKKKAISKLI 605

>GTFD_STRMU (P49331) Glucosyltransferase-S precursor (EC 2.4.1.5) (GTF-S)|
            (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1462

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 21/92 (22%)
 Frame = +1

Query: 61   FYINGHDHCLEHISSRNSPIQYFTSGG---------------------GSKAWRGVYQPN 177
            +Y + + H +  +   N  +QYF S G                     G++   G Y  +
Sbjct: 1128 YYFDNNGHMVYGLQHLNGEVQYFLSNGVQLRESFLENADGSKNYFGHLGNRYSNGYYSFD 1187

Query: 178  DDKLQFFYDGQGFMSLQLNKDQADFIFYDVSG 273
            +D    ++D  G M++ L     +  ++D  G
Sbjct: 1188 NDSKWRYFDASGVMAVGLKTINGNTQYFDQDG 1219

>RPOC_PSEPF (Q3K5Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1399

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -3

Query: 144 TASTSEVLDWTVSAANVFQAVVMPIDVEVDAVNLEDRKKQLQELL 10
           + + + ++D TV  A +FQ  V+P  +  D VNL  +KK + +L+
Sbjct: 563 SVNNTRIVDTTVGRALLFQ--VVPKGLSFDVVNLPMKKKAISKLI 605


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,310,315
Number of Sequences: 219361
Number of extensions: 1326770
Number of successful extensions: 3019
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3016
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)