>RIMK_RHOBA (Q7UNW8) Ribosomal protein S6 modification protein|
          Length = 405

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = +3

Query: 105 LTFGPHVVYYSATPLSEYDTIGTSVKAAVVYXGAALVK------LVCLATFLKVPDANDS 266
           L  G   +YY +  LS+YD +   + A++ Y G A+V+      + C  +   + ++ D 
Sbjct: 41  LAEGEPDLYYRSKQLSDYDGVLPRIGASITYFGTAVVRQFEQMDVFCANSSAGISNSRDK 100

Query: 267 FDPYQEIMKILIG 305
               Q + +  IG
Sbjct: 101 LRSLQILSRHQIG 113

>ACKA1_NEIMB (Q9JYM1) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)|
          Length = 398

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 171 TSVKAAVVYXGAALVKLVCLATFLKVPDANDSFDPYQEIMKI 296
           +S+K AV+  G+  V L CLA  L +PDA  +F    E  K+
Sbjct: 14  SSLKGAVLDNGSGEVLLSCLAEKLNLPDAYITFKVNGEKHKV 55

>ACKA1_NEIMA (Q9JTM0) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)|
          Length = 398

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 171 TSVKAAVVYXGAALVKLVCLATFLKVPDANDSFDPYQEIMKI 296
           +S+K AV+  G+  V L CLA  L +PDA  +F    E  K+
Sbjct: 14  SSLKGAVLDNGSGEVLLSCLAEKLNLPDAYITFKVNGEKHKV 55

>RIMK_COXBU (Q83BB0) Ribosomal protein S6 modification protein|
          Length = 301

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = +3

Query: 126 VYYSATPLSEYDTIGTSVKAAVVYXGAALVK------LVCLATFLKVPDANDSFDPYQEI 287
           ++Y    L+ YD +   + A++ + G A+V+        CL + + +  + D F   Q  
Sbjct: 48  IHYMGKELARYDAVIPRIGASITFYGTAVVRQFEMMGTFCLNSSMSITRSRDKFRSLQ-- 105

Query: 288 MKILIGFIDVAGLYFALTQLTH 353
                 F+   G+   +T   H
Sbjct: 106 ------FLSRKGIDLPITGFAH 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,986,718
Number of Sequences: 219361
Number of extensions: 427650
Number of successful extensions: 866
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)