ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18g20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471984.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
3emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4,... 82 2e-12
4ref|XM_471993.1| Oryza sativa (japonica cultivar-group), predic... 78 3e-11
5ref|XM_471997.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
6ref|XM_471973.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
7ref|XM_471960.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
8dbj|AK071447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
9emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
10emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
11ref|XM_471978.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
12ref|NM_112314.2| Arabidopsis thaliana lyase AT3G14540 mRNA, comp... 48 0.027
13gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.027
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
15gb|AF497490.1| Arabidopsis thaliana terpene synthase mRNA, compl... 48 0.027
16dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.027
17ref|XM_471998.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
18dbj|AK062280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
19ref|NM_112312.3| Arabidopsis thaliana lyase AT3G14520 mRNA, comp... 42 1.6
20gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, co... 42 1.6
21gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
23gb|AC140313.2| Mus musculus BAC clone RP24-324C6 from chromosome... 42 1.6
24gb|AC092665.3| Homo sapiens BAC clone RP11-544B5 from 4, complet... 42 1.6
25emb|BX088542.7| Zebrafish DNA sequence from clone CH211-183F16, ... 42 1.6
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27gb|AF497489.1| Arabidopsis thaliana terpene synthase mRNA, compl... 42 1.6
28emb|BX823073.1|CNS0A4W8 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
29gb|BT004277.1| Arabidopsis thaliana clone RAFL15-40-C22 (R50104)... 42 1.6
30gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
31emb|AL953867.18| Zebrafish DNA sequence from clone CH211-258L4 i... 42 1.6
32gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Canc... 42 1.6
33gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.6
34gb|AC170750.2| Mus musculus BAC clone RP23-295C23 from chromosom... 42 1.6
35gb|BC019754.1| Mus musculus RIKEN cDNA B230342M21 gene, mRNA (cD... 40 6.5
36gb|AC102597.22| Mus musculus chromosome 18, clone RP23-361H2, co... 40 6.5
37gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, com... 40 6.5
38gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, com... 40 6.5
39gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, comp... 40 6.5
40emb|Z81527.1|CEF35E12 Caenorhabditis elegans Cosmid F35E12, comp... 40 6.5
41gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, com... 40 6.5
42emb|AL731568.7| Human DNA sequence from clone RP11-367B6 on chro... 40 6.5
43emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on ch... 40 6.5
44gb|AC080011.22| Homo sapiens 12 BAC RP11-316A16 (Roswell Park Ca... 40 6.5
45dbj|AK131647.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 40 6.5
46ref|NM_133898.2| Mus musculus RIKEN cDNA B230342M21 gene (B23034... 40 6.5
47gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, comp... 40 6.5
48dbj|AK046116.1| Mus musculus adult male corpora quadrigemina cDN... 40 6.5
49ref|NM_073996.1| Caenorhabditis elegans F35E12.2 (F35E12.2) mRNA... 40 6.5
50ref|NM_060613.3| Caenorhabditis elegans Y47H9C.7 (Y47H9C.7) mRNA... 40 6.5
51emb|AL032657.1|CEY47H9C Caenorhabditis elegans YAC Y47H9C, compl... 40 6.5
52gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome... 40 6.5
53emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chr... 40 6.5
54gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, comp... 40 6.5 
>ref|XM_471984.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 322 ttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaaga 378
           |||||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 906 ttattatctccaggaagttgaatggttacaccagaatcacaagccaagctttcaaga 962



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 101 atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
           ||||||||||||||||| || ||||||||||| |||||| | ||  | |||||||  |||
Sbjct: 685 atggatgacacatatgacgcccatgccaccatcgaggaaagccggaagctaaatgaagcc 744

                            
Query: 161 atacaaagatgggatga 177
           |||||||||||||||||
Sbjct: 745 atacaaagatgggatga 761
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 322      ttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaaga 378
                |||||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 16294786 ttattatctccaggaagttgaatggttacaccagaatcacaagccaagctttcaaga 16294730



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 99       tgatggatgacacatatgatgcacatgccaccatagaggaatg 141
                |||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 16395646 tgatggatgatacatatgatgctcatgccaccatcgaggaatg 16395604



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 317      tctatttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaa 376
                |||| |||||| || ||||||| ||||||||   ||||||| ||||||||| ||||||||
Sbjct: 16364751 tctacttattacctacaagaagctgaatggtcctaccagaaacacaagccaagctttaaa 16364692

                     
Query: 377      gatca 381
                |||||
Sbjct: 16364691 gatca 16364687



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 101      atggatgacacatatgatgcacatgccaccatagaggaatg 141
                |||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 16171318 atggatgacacatatgatgatcatgccaccatcgaggaatg 16171278



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 101      atggatgacacatatgatgcacatgccaccatagaggaatg 141
                |||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 16077900 atggatgacacatatgatgatcatgccaccatcgaggaatg 16077860



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 101      atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
                |||||||||||||||||| | |||||||||||  | ||||||||  | |||||||  |||
Sbjct: 16422970 atggatgacacatatgattcccatgccaccatccaagaatgtcggaagctaaatgaagcc 16422911

                        
Query: 161      atacaaag 168
                ||||||||
Sbjct: 16422910 atacaaag 16422903



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 101      atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
                ||||||||||||||||| || ||||||||||| |||||| | ||  | |||||||  |||
Sbjct: 16297832 atggatgacacatatgacgcccatgccaccatcgaggaaagccggaagctaaatgaagcc 16297773

                        
Query: 161      atacaaag 168
                ||||||||
Sbjct: 16297772 atacaaag 16297765



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 99       tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
                |||||||||| || |||||||| ||||||||| | |||||||| || || |||||  | |
Sbjct: 16365621 tgatggatgatacgtatgatgctcatgccaccgttgaggaatgccggcagctaaacacag 16365562

                          
Query: 159      ccatacaaag 168
                ||||||||||
Sbjct: 16365561 ccatacaaag 16365552
to top
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06,
              complete sequence
          Length = 187154

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 322    ttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaaga 378
              |||||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 139700 ttattatctccaggaagttgaatggttacaccagaatcacaagccaagctttcaaga 139644



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 101   atggatgacacatatgatgcacatgccaccatagaggaatg 141
             |||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 16235 atggatgacacatatgatgatcatgccaccatcgaggaatg 16195



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                          
Query: 101    atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
              ||||||||||||||||| || ||||||||||| |||||| | ||  | |||||||  |||
Sbjct: 142746 atggatgacacatatgacgcccatgccaccatcgaggaaagccggaagctaaatgaagcc 142687

                      
Query: 161    atacaaag 168
              ||||||||
Sbjct: 142686 atacaaag 142679
to top
>ref|XM_471993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1347

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
           |||||||||| || |||||||| ||||||||| | |||||||| || || |||||  | |
Sbjct: 602 tgatggatgatacgtatgatgctcatgccaccgttgaggaatgccggcagctaaacacag 661

                                                                       
Query: 159 ccatacaaagatgggatgaaagcgccacttccattctgcctgactaccttaaaaggttct 218
           ||||||||||||||||  ||||||| | ||| ||| |||| || ||||| |||| |||||
Sbjct: 662 ccatacaaagatgggacaaaagcgctatttctattttgccggagtacctgaaaaagttct 721

              
Query: 219 ata 221
           |||
Sbjct: 722 ata 724



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 317 tctatttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaa 376
           |||| |||||| || ||||||| ||||||||   ||||||| ||||||||| ||||||||
Sbjct: 820 tctacttattacctacaagaagctgaatggtcctaccagaaacacaagccaagctttaaa 879

                
Query: 377 gatca 381
           |||||
Sbjct: 880 gatca 884
to top
>ref|XM_471997.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1425

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 101 atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
           |||||||||||||||||| | |||||||||||  | ||||||||  | |||||||  |||
Sbjct: 685 atggatgacacatatgattcccatgccaccatccaagaatgtcggaagctaaatgaagcc 744

                            
Query: 161 atacaaagatgggatga 177
           |||||||||||||||||
Sbjct: 745 atacaaagatgggatga 761
to top
>ref|XM_471973.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1518

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 101 atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
           |||||||||||||||||||  ||||||||||| ||||||||  |  | || ||||  |||
Sbjct: 772 atggatgacacatatgatgatcatgccaccatcgaggaatgcaggaagctgaatgaagcc 831

                               
Query: 161 atacaaagatgggatgaaag 180
           ||||||||||||||||||||
Sbjct: 832 atacaaagatgggatgaaag 851
to top
>ref|XM_471960.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1518

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 101 atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
           |||||||||||||||||||  ||||||||||| ||||||||  |  | || ||||  |||
Sbjct: 772 atggatgacacatatgatgatcatgccaccatcgaggaatgcaggaagctgaatgaagcc 831

                               
Query: 161 atacaaagatgggatgaaag 180
           ||||||||||||||||||||
Sbjct: 832 atacaaagatgggatgaaag 851
to top
>dbj|AK071447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097D21, full
            insert sequence
          Length = 2108

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                        
Query: 101  atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
            |||||||||||||||||||  ||||||||||| ||||||||  |  | || ||||  |||
Sbjct: 1131 atggatgacacatatgatgatcatgccaccatcgaggaatgcaggaagctgaatgaagcc 1190

                                
Query: 161  atacaaagatgggatgaaag 180
            ||||||||||||||||||||
Sbjct: 1191 atacaaagatgggatgaaag 1210
to top
>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11,
             complete sequence
          Length = 132394

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 99    tgatggatgacacatatgatgcacatgccaccatagaggaatg 141
             |||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 56212 tgatggatgatacatatgatgctcatgccaccatcgaggaatg 56170



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 317   tctatttattatctccaagaagttgaatggttaaaccagaatcacaagccatgctttaaa 376
             |||| |||||| || ||||||| ||||||||   ||||||| ||||||||| ||||||||
Sbjct: 25317 tctacttattacctacaagaagctgaatggtcctaccagaaacacaagccaagctttaaa 25258

                  
Query: 377   gatca 381
             |||||
Sbjct: 25257 gatca 25253



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 101   atggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggcc 160
             |||||||||||||||||| | |||||||||||  | ||||||||  | |||||||  |||
Sbjct: 83536 atggatgacacatatgattcccatgccaccatccaagaatgtcggaagctaaatgaagcc 83477

                     
Query: 161   atacaaag 168
             ||||||||
Sbjct: 83476 atacaaag 83469



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 99    tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
             |||||||||| || |||||||| ||||||||| | |||||||| || || |||||  | |
Sbjct: 26187 tgatggatgatacgtatgatgctcatgccaccgttgaggaatgccggcagctaaacacag 26128

                       
Query: 159   ccatacaaag 168
             ||||||||||
Sbjct: 26127 ccatacaaag 26118
to top
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20,
              complete sequence
          Length = 145825

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                       
Query: 101    atggatgacacatatgatgcacatgccaccatagaggaatg 141
              |||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 132068 atggatgacacatatgatgatcatgccaccatcgaggaatg 132028



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 101   atggatgacacatatgatgcacatgccaccatagaggaatg 141
             |||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 38650 atggatgacacatatgatgatcatgccaccatcgaggaatg 38610
to top
>ref|XM_471978.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
           ||||||| ||||||| |||| | ||||| |||||  | ||||| |||||  ||||  | |
Sbjct: 782 tgatggacgacacatttgattcccatgctaccattcaagaatgccgacagttaaactcag 841

                                    
Query: 159 ccatacaaagatgggatgaaagcgc 183
           | |||||||||||||||||||||||
Sbjct: 842 caatacaaagatgggatgaaagcgc 866
to top
>ref|NM_112314.2| Arabidopsis thaliana lyase AT3G14540 mRNA, complete cds
          Length = 1984

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 103  ggatgacacatatgatgcacatgc 126
            ||||||||||||||||||||||||
Sbjct: 1056 ggatgacacatatgatgcacatgc 1079
to top
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
             complete sequence
          Length = 146541

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 101   atggatgacacatatgatgcacatgccaccatagaggaatgtcg 144
             ||||||||||||||||||   ||||||| ||| |||||||||||
Sbjct: 94149 atggatgacacatatgattgccatgccaacatcgaggaatgtcg 94192
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 101      atggatgacacatatgatgcacatgccaccatagaggaatgtcg 144
                ||||||||||||||||||   ||||||| ||| |||||||||||
Sbjct: 14014072 atggatgacacatatgattgccatgccaacatcgaggaatgtcg 14014115



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 323     tattatctccaagaagttgaatggt 347
               |||||||||||||||| ||||||||
Sbjct: 9610993 tattatctccaagaagctgaatggt 9611017
to top
>gb|AF497490.1| Arabidopsis thaliana terpene synthase mRNA, complete cds
          Length = 1809

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 103  ggatgacacatatgatgcacatgc 126
            ||||||||||||||||||||||||
Sbjct: 1056 ggatgacacatatgatgcacatgc 1079
to top
>dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE1
          Length = 84462

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 103   ggatgacacatatgatgcacatgc 126
             ||||||||||||||||||||||||
Sbjct: 10581 ggatgacacatatgatgcacatgc 10558



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 102  tggatgacacatatgatgcacatgc 126
            |||||||||| ||||||||||||||
Sbjct: 4853 tggatgacacttatgatgcacatgc 4829
to top
>ref|XM_471998.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1515

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
           |||||||||| ||||||||| | ||||| |||||  |||||||  |  | |||||||  |
Sbjct: 773 tgatggatgatacatatgattcccatgctaccatccaggaatgcaggaagctaaatgaag 832

                              
Query: 159 ccatacaaagatgggatga 177
           |||||||||||||| ||||
Sbjct: 833 ccatacaaagatggaatga 851
to top
>dbj|AK062280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C03, full
           insert sequence
          Length = 1651

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgatggatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcgg 158
           |||||||||| ||||||||| | ||||| |||||  |||||||  |  | |||||||  |
Sbjct: 811 tgatggatgatacatatgattcccatgctaccatccaggaatgcaggaagctaaatgaag 870

                              
Query: 159 ccatacaaagatgggatga 177
           |||||||||||||| ||||
Sbjct: 871 ccatacaaagatggaatga 889
to top
>ref|NM_112312.3| Arabidopsis thaliana lyase AT3G14520 mRNA, complete cds
          Length = 2028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  tggatgacacatatgatgcacatgc 126
            |||||||||| ||||||||||||||
Sbjct: 1154 tggatgacacttatgatgcacatgc 1178
to top
>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence
          Length = 170117

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 95   tccctgatggatgacacatatgatg 119
            |||||||||||| ||||||||||||
Sbjct: 1727 tccctgatggatcacacatatgatg 1703
to top
>gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0088M06, from chromosome 5, complete sequence
          Length = 150099

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 323    tattatctccaagaagttgaatggt 347
              |||||||||||||||| ||||||||
Sbjct: 119676 tattatctccaagaagctgaatggt 119700
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 104      gatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggccata 163
                |||||||| |||||| | ||||| ||  | |||||||||||| | || |||| |||||||
Sbjct: 13041510 gatgacacttatgatacgcatgctactttggaggaatgtcgaaatctcaatgtggccata 13041451

                     
Query: 164      caaag 168
                |||||
Sbjct: 13041450 caaag 13041446
to top
>gb|AC140313.2| Mus musculus BAC clone RP24-324C6 from chromosome 15, complete sequence
          Length = 215861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 95    tccctgatggatgacacatatgatg 119
             |||||||||||| ||||||||||||
Sbjct: 44545 tccctgatggatcacacatatgatg 44569
to top
>gb|AC092665.3| Homo sapiens BAC clone RP11-544B5 from 4, complete sequence
          Length = 138504

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    ttctgcctgactaccttaaaa 212
              |||||||||||||||||||||
Sbjct: 124704 ttctgcctgactaccttaaaa 124684
to top
>emb|BX088542.7| Zebrafish DNA sequence from clone CH211-183F16, complete sequence
          Length = 151598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 381   acctgaggttatctgccatgtccat 405
             |||||||||| ||||||||||||||
Sbjct: 63748 acctgaggttttctgccatgtccat 63772
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 104      gatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggccata 163
                |||||||| |||||| | ||||| ||  | |||||||||||| | || |||| |||||||
Sbjct: 13038285 gatgacacttatgatacgcatgctactttggaggaatgtcgaaatctcaatgtggccata 13038226

                     
Query: 164      caaag 168
                |||||
Sbjct: 13038225 caaag 13038221
to top
>gb|AF497489.1| Arabidopsis thaliana terpene synthase mRNA, complete cds
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  tggatgacacatatgatgcacatgc 126
            |||||||||| ||||||||||||||
Sbjct: 1064 tggatgacacttatgatgcacatgc 1088
to top
>emb|BX823073.1|CNS0A4W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB87ZH04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1984

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  tggatgacacatatgatgcacatgc 126
            |||||||||| ||||||||||||||
Sbjct: 1157 tggatgacacttatgatgcacatgc 1181
to top
>gb|BT004277.1| Arabidopsis thaliana clone RAFL15-40-C22 (R50104) At3g14520 mRNA,
            complete sequence
          Length = 1965

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  tggatgacacatatgatgcacatgc 126
            |||||||||| ||||||||||||||
Sbjct: 1081 tggatgacacttatgatgcacatgc 1105
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
              complete sequence
          Length = 176637

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 104    gatgacacatatgatgcacatgccaccatagaggaatgtcgacaactaaatgcggccata 163
              |||||||| |||||| | ||||| ||  | |||||||||||| | || |||| |||||||
Sbjct: 119208 gatgacacttatgatacgcatgctactttggaggaatgtcgaaatctcaatgtggccata 119149

                   
Query: 164    caaag 168
              |||||
Sbjct: 119148 caaag 119144
to top
>emb|AL953867.18| Zebrafish DNA sequence from clone CH211-258L4 in linkage group 22,
              complete sequence
          Length = 177575

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    aactaaatgcggccatacaaa 167
              |||||||||||||||||||||
Sbjct: 134312 aactaaatgcggccatacaaa 134292
to top
>gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 208408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tatttaaagatgctacacgtg 257
            |||||||||||||||||||||
Sbjct: 9583 tatttaaagatgctacacgtg 9603
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 79      gcaattgatgcttatttccctgatg 103
               ||||||| |||||||||||||||||
Sbjct: 6776690 gcaattggtgcttatttccctgatg 6776714
to top
>gb|AC170750.2| Mus musculus BAC clone RP23-295C23 from chromosome 1, complete sequence
          Length = 203110

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   tatttaaagatgctacacgtg 257
             |||||||||||||||||||||
Sbjct: 82881 tatttaaagatgctacacgtg 82901
to top
>gb|BC019754.1| Mus musculus RIKEN cDNA B230342M21 gene, mRNA (cDNA clone MGC:25761
           IMAGE:4007588), complete cds
          Length = 1879

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 ttctatttattatctccaagaagt 339
           ||||||||||||||||||| ||||
Sbjct: 909 ttctatttattatctccaacaagt 932
to top
>gb|AC102597.22| Mus musculus chromosome 18, clone RP23-361H2, complete sequence
          Length = 204401

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   tttcaagatctttctatttattat 328
             ||||||||||| ||||||||||||
Sbjct: 81508 tttcaagatctatctatttattat 81531
to top
>gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, complete sequence
          Length = 164645

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    tttcaagatctttctatttattat 328
              ||||||||||| ||||||||||||
Sbjct: 158777 tttcaagatctatctatttattat 158800
to top
>gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, complete sequence
          Length = 160709

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   agtcacaagggaaacatttg 473
             ||||||||||||||||||||
Sbjct: 77655 agtcacaagggaaacatttg 77636
to top
>gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, complete sequence
          Length = 176471

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 316    ttctatttattatctccaagaagt 339
              ||||||||||||||||||| ||||
Sbjct: 174668 ttctatttattatctccaacaagt 174645
to top
>emb|Z81527.1|CEF35E12 Caenorhabditis elegans Cosmid F35E12, complete sequence
          Length = 31170

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  tattatctccaagaagttga 342
            ||||||||||||||||||||
Sbjct: 4663 tattatctccaagaagttga 4682
to top
>gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, complete sequence
          Length = 168622

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    agtcacaagggaaacatttg 473
              ||||||||||||||||||||
Sbjct: 103617 agtcacaagggaaacatttg 103636
to top
>emb|AL731568.7| Human DNA sequence from clone RP11-367B6 on chromosome 10 Contains
            the 5' end of the gene for CDA017 protein, a novel gene
            and a CpG island, complete sequence
          Length = 137034

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   catgagaaagaatttgcgtt 57
            ||||||||||||||||||||
Sbjct: 7953 catgagaaagaatttgcgtt 7972
to top
>emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on chromosome 13 Contains
            part of the GPC6 gene for glypican 6, complete sequence
          Length = 173526

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 307  tcaagatctttctatttattatct 330
            |||||||||||||||| |||||||
Sbjct: 9855 tcaagatctttctattcattatct 9878
to top
>gb|AC080011.22| Homo sapiens 12 BAC RP11-316A16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106902

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gttgtcaagaatatttctta 74
             ||||||||||||||||||||
Sbjct: 42472 gttgtcaagaatatttctta 42453
to top
>dbj|AK131647.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
           library, clone:1520402E19 product:Inferred: dM417G6.2.1,
           full insert sequence
          Length = 1897

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 ttctatttattatctccaagaagt 339
           ||||||||||||||||||| ||||
Sbjct: 939 ttctatttattatctccaacaagt 962
to top
>ref|NM_133898.2| Mus musculus RIKEN cDNA B230342M21 gene (B230342M21Rik), mRNA
          Length = 1881

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 ttctatttattatctccaagaagt 339
           ||||||||||||||||||| ||||
Sbjct: 923 ttctatttattatctccaacaagt 946
to top
>gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, complete sequence
          Length = 171035

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    ttctatttattatctccaagaagt 339
              ||||||||||||||||||| ||||
Sbjct: 165256 ttctatttattatctccaacaagt 165279
to top
>dbj|AK046116.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230342M21
           product:inferred: dM417G6.2.1 (novel protein (isoform
           1)) [Mus musculus], full insert sequence
          Length = 1882

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 ttctatttattatctccaagaagt 339
           ||||||||||||||||||| ||||
Sbjct: 924 ttctatttattatctccaacaagt 947
to top
>ref|NM_073996.1| Caenorhabditis elegans F35E12.2 (F35E12.2) mRNA, complete cds
          Length = 1086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 tattatctccaagaagttga 342
           ||||||||||||||||||||
Sbjct: 247 tattatctccaagaagttga 228
to top
>ref|NM_060613.3| Caenorhabditis elegans Y47H9C.7 (Y47H9C.7) mRNA, complete cds
          Length = 1144

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  tgcttatttccctgatggat 106
           ||||||||||||||||||||
Sbjct: 685 tgcttatttccctgatggat 704
to top
>emb|AL032657.1|CEY47H9C Caenorhabditis elegans YAC Y47H9C, complete sequence
          Length = 75342

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    tgcttatttccctgatggat 106
             ||||||||||||||||||||
Sbjct: 62020 tgcttatttccctgatggat 62001
to top
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence
          Length = 225816

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    ccaacgctatgtgtaggttt 432
              ||||||||||||||||||||
Sbjct: 160377 ccaacgctatgtgtaggttt 160396
to top
>emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chromosome 5, complete
            sequence
          Length = 179132

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 316  ttctatttattatctccaagaagt 339
            ||||||||||||||||||| ||||
Sbjct: 4640 ttctatttattatctccaacaagt 4617
to top
>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     attgatgcttatttccctga 101
              ||||||||||||||||||||
Sbjct: 180144 attgatgcttatttccctga 180125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,387,839
Number of Sequences: 3902068
Number of extensions: 4387839
Number of successful extensions: 156243
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 155996
Number of HSP's gapped (non-prelim): 249
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top