>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1) (DACA-1)
          Length = 559

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 263 NQHETPTICRQEHLSSYYMMSGCSPYAGDGKQWASAGS--TPYFSTLGSV*LQTNTDRH 93
           NQ  +       +LSSYY  S   PY+ +   W++AG    PY +T G +   +N D H
Sbjct: 43  NQSNSYPSMSDPYLSSYYPPSIGFPYSLNEAPWSTAGDPPIPYLTTYGQL---SNGDHH 98

>YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1 homolog) (DACA-1 homolog)
          Length = 559

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 227 HLSSYYMMSGCSPYAGDGKQWASAGS--TPYFSTLGSV*LQTNTDRH 93
           +LSSYY  S   PY+     W++AG    PY +T G +   +N D H
Sbjct: 55  YLSSYYPPSIGFPYSLSEAPWSTAGDPPIPYLTTYGQL---SNGDHH 98

>HMDH_SCHMA (P16237) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC|
           1.1.1.34) (HMG-CoA reductase)
          Length = 948

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 262 FLRTHMVLKPCWKKQLDGEEVFCFLSKRGVSSESRQ 369
           FL + M +   + K++ GE+  C +S +GVSS +R+
Sbjct: 216 FLPSFMRIFASYAKRMYGEQKKCLVSNKGVSSSTRK 251

>CU045_HUMAN (Q9NYP9) Protein C21orf45|
          Length = 233

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 26/104 (25%), Positives = 41/104 (39%)
 Frame = -2

Query: 365 RLSEDTPRFERKQKTSSPSSCFFQQGFSTMCVLKNQHETPTICRQEHLSSYYMMSGCSPY 186
           RLSED+ R +  QK +S  S   +   S   + + Q E      +E     ++ SGC   
Sbjct: 34  RLSEDSSRHQLLQKWASMWSSMSEDA-SVADMERAQLEEEAAAAEER-PLVFLCSGCRRP 91

Query: 185 AGDGKQWASAGSTPYFSTLGSV*LQTNTDRHVWFSSLTEDRGWV 54
            GD   W ++        L  V    + D+    S   ++ G V
Sbjct: 92  LGDSLSWVASQEDTNCILLRCVSCNVSVDKEQKLSKREKENGCV 135

>GCM2_DROME (Q9VLA2) Transcription factor glial cells missing 2 (Protein|
           glide-2)
          Length = 613

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 70  SVKLLNQTCLSVFVCSQ--TEPRVEKYGVDPAL 162
           +V +L ++CL V VCSQ  T P   K  + PA+
Sbjct: 127 NVNILKKSCLGVLVCSQHCTLPNGSKINLRPAI 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,321,272
Number of Sequences: 219361
Number of extensions: 1220892
Number of successful extensions: 2719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2719
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)