ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18f17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full ... 438 e-120
2ref|XM_478893.1| Oryza sativa (japonica cultivar-group), mRNA 147 4e-32
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
4dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
5dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
6ref|XM_478892.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
7ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group... 139 9e-30
8gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter m... 139 9e-30
9dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
10dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
11ref|NM_189409.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
13dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
14gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full... 72 2e-09
15gb|AY104485.1| Zea mays PCO125163 mRNA sequence 60 7e-06
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
17gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 58 3e-05
18gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 58 3e-05
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
20dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
21dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
22ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
23gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
24gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 geno... 52 0.002
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
26dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
28gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.007
29dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
30dbj|AK073216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
31gb|AC148293.6| Medicago truncatula clone mth2-16c13, complete se... 48 0.027
32emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chr... 44 0.42
33gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complet... 44 0.42
34emb|AJ532590.1|PMA532590 Plantago major macronuclear mRNA for po... 44 0.42
35ref|XM_511685.1| PREDICTED: Pan troglodytes zinc finger CCCH typ... 42 1.6
36gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg... 42 1.6
37gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, compl... 42 1.6
38ref|XM_964385.1| PREDICTED: Tribolium castaneum similar to CG575... 42 1.6
39gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP... 42 1.6
40ref|XM_940903.1| PREDICTED: Homo sapiens zinc finger CCCH-type c... 42 1.6
41ref|XM_036115.7| PREDICTED: Homo sapiens zinc finger CCCH-type c... 42 1.6
42gb|BC053362.1| Homo sapiens zinc finger CCCH-type containing 5, ... 42 1.6
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
44dbj|AB092604.1| Pectobacterium carotovorum subsp. carotovorum pr... 42 1.6
45emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chr... 42 1.6
46dbj|AB051540.1| Homo sapiens mRNA for KIAA1753 protein, partial cds 42 1.6
47gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.5
48gb|AC091353.6| Rattus norvegicus 4 BAC CH230-1B20 (Children's Ho... 40 6.5
49gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hos... 40 6.5
50gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.5
51emb|Z67734.1|CEB0198 Caenorhabditis elegans Cosmid B0198, comple... 40 6.5
52gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.5
53gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.5
54gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.5
55gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.5
56ref|XM_780487.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
57emb|X03683.1|ECCYTR E. coli cytR gene coding for Cyt repressor 40 6.5
58gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2... 40 6.5
59dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.5
60dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.5
61ref|NM_077613.1| Caenorhabditis elegans B0198.1 (tetraspanin) mR... 40 6.5
62gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 6.5
63gb|AC073416.8| Homo sapiens BAC clone RP11-136K15 from 2, comple... 40 6.5
64gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.5
65dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
66gb|AE005031.1| Halobacterium sp. NRC-1 section 62 of 170 of the ... 40 6.5
67gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, co... 40 6.5
68dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
69ref|XM_319528.2| Anopheles gambiae str. PEST ENSANGP00000017784 ... 40 6.5
70ref|XM_314193.2| Anopheles gambiae str. PEST ENSANGP00000014442 ... 40 6.5
71emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.5
72dbj|AK066280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
73gb|AC145979.4| Gallus gallus BAC clone CH261-10P22 from chromoso... 40 6.5
74gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.5
75ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal... 40 6.5
76dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.5
77gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.5
78gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.5
79gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.5
80dbj|AP001242.3| Homo sapiens genomic DNA, chromosome 2p11.2, clo... 40 6.5
81emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chr... 40 6.5 
>gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full insert mRNA sequence
          Length = 1872

 Score =  438 bits (221), Expect = e-120
 Identities = 284/306 (92%), Gaps = 3/306 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    cacctcggnngtcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatg 60
            ||||||||  |||||||| ||| |||||||||||||||||||  |||| ||| |||||||
Sbjct: 1345 cacctcggaggtcttcccactgcgggtgcgcgcgctgggcttcgcgctgggcacgtcatg 1404

                                                                        
Query: 61   caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
            ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 caaccgcgtcaccagcgccgcggtctccatgtccttcctgtccttgtccaaggccatcac 1464

                                                                        
Query: 121  catcggcggcagcttcttcctgtacgccggcatcgcggcgctcggatggattttcttctt 180
            |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1465 catcggcggcagcttcttcctgtacgccggcatcgcggcgataggatggattttcttctt 1524

                                                                        
Query: 181  caccttcattccggagacgcgtggcctgccgctggaggagatcgggaagcttttcggcat 240
            ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1525 caccttcattccggagacgcgtggcctgccgctcgaggagatagggaagcttttcggcat 1584

                                                                        
Query: 241  gaaggacagggtcgtcgaag---aagacaccgccacgaaagacaaggtgaaagtagtgga 297
            || ||||| || ||||||||   |||||||||||||||||||||||| |||||||| |||
Sbjct: 1585 gacggacacggccgtcgaagcccaagacaccgccacgaaagacaaggcgaaagtagggga 1644

                  
Query: 298  gatgaa 303
            ||||||
Sbjct: 1645 gatgaa 1650
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>ref|XM_478893.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1536

 Score =  147 bits (74), Expect = 4e-32
 Identities = 198/241 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    cacctcggnngtcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatg 60
            ||||||||   ||||||||||| ||| |||||||||||||||  || ||| || | | ||
Sbjct: 1227 cacctcggagatcttcccgctgcgggcgcgcgcgctgggcttcgcggtcgccgtggcgtg 1286

                                                                        
Query: 61   caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
            ||||||||| |||||||  |   |||||||| ||||||||||  | ||||  ||||||||
Sbjct: 1287 caaccgcgtcaccagcggcgtcatctccatgaccttcctgtcgctctccagcgccatcac 1346

                                                                        
Query: 121  catcggcggcagcttcttcctgtacgccggcatcgcggcgctcggatggattttcttctt 180
            ||||||||||||||||||||| ||||||| |||| || ||||||  ||| | ||||||||
Sbjct: 1347 catcggcggcagcttcttcctctacgccgccatctcgtcgctcgcgtgggtgttcttctt 1406

                                                                        
Query: 181  caccttcattccggagacgcgtggcctgccgctggaggagatcgggaagcttttcggcat 240
            |||   | | ||||||||||| |||| | |||||||||||||||| ||| | ||||||||
Sbjct: 1407 cactcgcctcccggagacgcgcggccagacgctggaggagatcggcaaggtgttcggcat 1466

             
Query: 241  g 241
            |
Sbjct: 1467 g 1467
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  147 bits (74), Expect = 4e-32
 Identities = 198/241 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1        cacctcggnngtcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatg 60
                ||||||||   ||||||||||| ||| |||||||||||||||  || ||| || | | ||
Sbjct: 23531527 cacctcggagatcttcccgctgcgggcgcgcgcgctgggcttcgcggtcgccgtggcgtg 23531468

                                                                            
Query: 61       caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
                ||||||||| |||||||  |   |||||||| ||||||||||  | ||||  ||||||||
Sbjct: 23531467 caaccgcgtcaccagcggcgtcatctccatgaccttcctgtcgctctccagcgccatcac 23531408

                                                                            
Query: 121      catcggcggcagcttcttcctgtacgccggcatcgcggcgctcggatggattttcttctt 180
                ||||||||||||||||||||| ||||||| |||| || ||||||  ||| | ||||||||
Sbjct: 23531407 catcggcggcagcttcttcctctacgccgccatctcgtcgctcgcgtgggtgttcttctt 23531348

                                                                            
Query: 181      caccttcattccggagacgcgtggcctgccgctggaggagatcgggaagcttttcggcat 240
                |||   | | ||||||||||| |||| | |||||||||||||||| ||| | ||||||||
Sbjct: 23531347 cactcgcctcccggagacgcgcggccagacgctggaggagatcggcaaggtgttcggcat 23531288

                 
Query: 241      g 241
                |
Sbjct: 23531287 g 23531287



 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                            
Query: 12       tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
                ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 23530098 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 23530157

                                                                            
Query: 72       ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
                ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 23530158 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 23530217

                                                                            
Query: 132      gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
                |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 23530218 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 23530277

                                               
Query: 192      cggagacgcgtggcctgccgctggaggagat 222
                ||||||| || |||| | |||||||||||||
Sbjct: 23530278 cggagacccgcggccggacgctggaggagat 23530308



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 117     tcaccatcggcggcagcttcttcc 140
               ||||||||||||||| ||||||||
Sbjct: 8501401 tcaccatcggcggcaacttcttcc 8501424
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>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1301_C12
          Length = 128396

 Score =  147 bits (74), Expect = 4e-32
 Identities = 198/241 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1     cacctcggnngtcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatg 60
             ||||||||   ||||||||||| ||| |||||||||||||||  || ||| || | | ||
Sbjct: 91920 cacctcggagatcttcccgctgcgggcgcgcgcgctgggcttcgcggtcgccgtggcgtg 91861

                                                                         
Query: 61    caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
             ||||||||| |||||||  |   |||||||| ||||||||||  | ||||  ||||||||
Sbjct: 91860 caaccgcgtcaccagcggcgtcatctccatgaccttcctgtcgctctccagcgccatcac 91801

                                                                         
Query: 121   catcggcggcagcttcttcctgtacgccggcatcgcggcgctcggatggattttcttctt 180
             ||||||||||||||||||||| ||||||| |||| || ||||||  ||| | ||||||||
Sbjct: 91800 catcggcggcagcttcttcctctacgccgccatctcgtcgctcgcgtgggtgttcttctt 91741

                                                                         
Query: 181   caccttcattccggagacgcgtggcctgccgctggaggagatcgggaagcttttcggcat 240
             |||   | | ||||||||||| |||| | |||||||||||||||| ||| | ||||||||
Sbjct: 91740 cactcgcctcccggagacgcgcggccagacgctggaggagatcggcaaggtgttcggcat 91681

              
Query: 241   g 241
             |
Sbjct: 91680 g 91680



 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                         
Query: 12    tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
             ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 90491 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 90550

                                                                         
Query: 72    ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
             ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 90551 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 90610

                                                                         
Query: 132   gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
             |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 90611 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 90670

                                            
Query: 192   cggagacgcgtggcctgccgctggaggagat 222
             ||||||| || |||| | |||||||||||||
Sbjct: 90671 cggagacccgcggccggacgctggaggagat 90701
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>dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-F04, full
            insert sequence
          Length = 1620

 Score =  147 bits (74), Expect = 4e-32
 Identities = 198/241 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    cacctcggnngtcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatg 60
            ||||||||   ||||||||||| ||| |||||||||||||||  || ||| || | | ||
Sbjct: 1215 cacctcggagatcttcccgctgcgggcgcgcgcgctgggcttcgcggtcgccgtggcgtg 1274

                                                                        
Query: 61   caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
            ||||||||| |||||||  |   |||||||| ||||||||||  | ||||  ||||||||
Sbjct: 1275 caaccgcgtcaccagcggcgtcatctccatgaccttcctgtcgctctccagcgccatcac 1334

                                                                        
Query: 121  catcggcggcagcttcttcctgtacgccggcatcgcggcgctcggatggattttcttctt 180
            ||||||||||||||||||||| ||||||| |||| || ||||||  ||| | ||||||||
Sbjct: 1335 catcggcggcagcttcttcctctacgccgccatctcgtcgctcgcgtgggtgttcttctt 1394

                                                                        
Query: 181  caccttcattccggagacgcgtggcctgccgctggaggagatcgggaagcttttcggcat 240
            |||   | | ||||||||||| |||| | |||||||||||||||| ||| | ||||||||
Sbjct: 1395 cactcgcctcccggagacgcgcggccagacgctggaggagatcggcaaggtgttcggcat 1454

             
Query: 241  g 241
            |
Sbjct: 1455 g 1455
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>ref|XM_478892.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1961

 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
            ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 1308 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 1367

                                                                        
Query: 72   ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
            ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 1368 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 1427

                                                                        
Query: 132  gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
            |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 1428 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 1487

                                           
Query: 192  cggagacgcgtggcctgccgctggaggagat 222
            ||||||| || |||| | |||||||||||||
Sbjct: 1488 cggagacccgcggccggacgctggaggagat 1518
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>ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1301_C12.3 mRNA
          Length = 1962

 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
            ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 1309 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 1368

                                                                        
Query: 72   ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
            ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 1369 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 1428

                                                                        
Query: 132  gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
            |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 1429 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 1488

                                           
Query: 192  cggagacgcgtggcctgccgctggaggagat 222
            ||||||| || |||| | |||||||||||||
Sbjct: 1489 cggagacccgcggccggacgctggaggagat 1519
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>gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter mRNA, complete cds
          Length = 1860

 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
            ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 1435 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 1494

                                                                        
Query: 72   ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
            ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 1495 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 1554

                                                                        
Query: 132  gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
            |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 1555 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 1614

                                           
Query: 192  cggagacgcgtggcctgccgctggaggagat 222
            ||||||| || |||| | |||||||||||||
Sbjct: 1615 cggagacccgcggccggacgctggaggagat 1645
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>dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E03, full
            insert sequence
          Length = 1962

 Score =  139 bits (70), Expect = 9e-30
 Identities = 175/211 (82%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
            ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 1309 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 1368

                                                                        
Query: 72   ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
            ||||||  |   |||||||| ||||||||||  |||||||||||||||||||||||||||
Sbjct: 1369 ccagcggcgtcatctccatgaccttcctgtcgctgtccaaggccatcaccatcggcggca 1428

                                                                        
Query: 132  gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
            |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 1429 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 1488

                                           
Query: 192  cggagacgcgtggcctgccgctggaggagat 222
            ||||||| || |||| | |||||||||||||
Sbjct: 1489 cggagacccgcggccggacgctggaggagat 1519
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>dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G08, full
            insert sequence
          Length = 1961

 Score =  131 bits (66), Expect = 2e-27
 Identities = 174/211 (82%)
 Strand = Plus / Plus

                                                                        
Query: 12   tcttcccgctgngggtgcgcgcgctgggcttnncgctcggcgcgtcatgcaaccgcgtga 71
            ||||||||||   |||||||||||||||||   |||||||||   |   ||||||||| |
Sbjct: 1308 tcttcccgctccaggtgcgcgcgctgggctgctcgctcggcgtcgccgccaaccgcgtca 1367

                                                                        
Query: 72   ccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcaccatcggcggca 131
            ||||||  |   |||||||| ||||||||||  |||||| ||||||||||||||||||||
Sbjct: 1368 ccagcggcgtcatctccatgaccttcctgtcgctgtccagggccatcaccatcggcggca 1427

                                                                        
Query: 132  gcttcttcctgtacgccggcatcgcggcgctcggatggattttcttcttcaccttcattc 191
            |||||||||| ||| |||||||||| |||||||  ||| | ||||||| ||||| | | |
Sbjct: 1428 gcttcttcctctactccggcatcgccgcgctcgcctgggtgttcttctacacctacctcc 1487

                                           
Query: 192  cggagacgcgtggcctgccgctggaggagat 222
            ||||||| || |||| | |||||||||||||
Sbjct: 1488 cggagacccgcggccggacgctggaggagat 1518
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>ref|NM_189409.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1536

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                        
Query: 84   tctccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgt 143
            |||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |
Sbjct: 1238 tctccatgaccttcctctccctctccaaggccatcaccatcggcggcagcttcttcctct 1297

                                                                        
Query: 144  acgccggcatcgcggcgctcggatggattttcttcttcaccttcattccggagacgcgtg 203
            |||||||| ||||  |||| |  ||| | ||||||||||||| | | |||||||| ||||
Sbjct: 1298 acgccggcgtcgcctcgcttgcttggctcttcttcttcacctacctcccggagactcgtg 1357

             
Query: 204  g 204
            |
Sbjct: 1358 g 1358
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                            
Query: 84       tctccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgt 143
                |||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |
Sbjct: 42629122 tctccatgaccttcctctccctctccaaggccatcaccatcggcggcagcttcttcctct 42629063

                                                                            
Query: 144      acgccggcatcgcggcgctcggatggattttcttcttcaccttcattccggagacgcgtg 203
                |||||||| ||||  |||| |  ||| | ||||||||||||| | | |||||||| ||||
Sbjct: 42629062 acgccggcgtcgcctcgcttgcttggctcttcttcttcacctacctcccggagactcgtg 42629003

                 
Query: 204      g 204
                |
Sbjct: 42629002 g 42629002
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>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                          
Query: 84     tctccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgt 143
              |||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |
Sbjct: 150005 tctccatgaccttcctctccctctccaaggccatcaccatcggcggcagcttcttcctct 149946

                                                                          
Query: 144    acgccggcatcgcggcgctcggatggattttcttcttcaccttcattccggagacgcgtg 203
              |||||||| ||||  |||| |  ||| | ||||||||||||| | | |||||||| ||||
Sbjct: 149945 acgccggcgtcgcctcgcttgcttggctcttcttcttcacctacctcccggagactcgtg 149886

               
Query: 204    g 204
              |
Sbjct: 149885 g 149885
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>gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full insert mRNA
            sequence
          Length = 2109

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                        
Query: 61   caaccgcgtgaccagcgcggcggtctccatgtccttcctgtccttgtccaaggccatcac 120
            ||||||| |||||||||  | | |||||||| ||||| | ||  ||||||||||||| ||
Sbjct: 1382 caaccgcctgaccagcggcgtgatctccatgaccttcatttcgctgtccaaggccatgac 1441

                                                
Query: 121  catcggcggcagcttcttcctgtacgccggcatcgc 156
            ||||||||||  ||||||||| | ||||||||||||
Sbjct: 1442 catcggcggcgccttcttcctcttcgccggcatcgc 1477
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>gb|AY104485.1| Zea mays PCO125163 mRNA sequence
          Length = 1304

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 87  ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
           ||||||||||||| ||  | ||||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 626 ccatgtccttcctctcgctctccaacgccatcaccatcgccggcagcttctacctctacg 685

                     
Query: 147 ccggcatcgc 156
           |  |||||||
Sbjct: 686 cgtgcatcgc 695
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                           
Query: 87      ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
               ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 5068167 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 5068226

                
Query: 147     c 147
               |
Sbjct: 5068227 c 5068227



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 109     caaggccatcaccatcggcggcagcttcttcctgtacgccggcat 153
               ||||||||||||| ||| ||| ||||||| ||| |||||||||||
Sbjct: 5081920 caaggccatcaccttcgccgggagcttctacctctacgccggcat 5081964
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>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 87     ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
              ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 132621 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 132680

               
Query: 147    c 147
              |
Sbjct: 132681 c 132681
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 87     ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
              ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 101540 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 101481

               
Query: 147    c 147
              |
Sbjct: 101480 c 101480



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 109   caaggccatcaccatcggcggcagcttcttcctgtacgccggcat 153
             ||||||||||||| ||| ||| ||||||| ||| |||||||||||
Sbjct: 87787 caaggccatcaccttcgccgggagcttctacctctacgccggcat 87743
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                           
Query: 87      ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
               ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 5067382 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 5067441

                
Query: 147     c 147
               |
Sbjct: 5067442 c 5067442



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 109     caaggccatcaccatcggcggcagcttcttcctgtacgccggcat 153
               ||||||||||||| ||| ||| ||||||| ||| |||||||||||
Sbjct: 5081135 caaggccatcaccttcgccgggagcttctacctctacgccggcat 5081179
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>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full
            insert sequence
          Length = 2167

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 87   ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
            ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 1544 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 1603

             
Query: 147  c 147
            |
Sbjct: 1604 c 1604
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>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full
            insert sequence
          Length = 2300

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 87   ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
            ||||||||||||| ||  | ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 1545 ccatgtccttcctctcgctctccaacgccatcaccatcgccgggagcttctacctgtacg 1604

             
Query: 147  c 147
            |
Sbjct: 1605 c 1605
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>ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative mannitol transporter
            protein (OSJNBb0076H04.3), mRNA
          Length = 1521

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 109  caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
            ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 1299 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 1340
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>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19,
              complete sequence
          Length = 147706

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 109    caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
              ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 142592 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 142633
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>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete
             sequence
          Length = 141050

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 109   caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
             ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 20702 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 20743
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 109      caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
                ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 10538259 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 10538218
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>dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G21, full
            insert sequence
          Length = 1998

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 109  caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
            ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 1495 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 1536
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 109      caaggccatcaccatcggcggcagcttcttcctgtacgccgg 150
                ||||||||||||||||||||||  ||||||||| | ||||||
Sbjct: 10544298 caaggccatcaccatcggcggcgccttcttcctcttcgccgg 10544257
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>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 109    caaggccatcaccatcggcggcagcttcttcctgtacgccggcat 153
              ||||||||||||| ||| ||| ||||||| ||| |||||||||||
Sbjct: 174600 caaggccatcaccttcgccgggagcttctacctctacgccggcat 174556
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>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full
            insert sequence
          Length = 2252

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 53/61 (86%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                        
Query: 87   ccatgtccttcctgtccttgtccaaggccatcaccatcggcggcagcttcttcctgtacg 146
            ||||||||||||| ||  | ||||| |||||||||||||| || ||||||| ||||||||
Sbjct: 1545 ccatgtccttcctctcgctctccaacgccatcaccatcgg-gggagcttctacctgtacg 1603

             
Query: 147  c 147
            |
Sbjct: 1604 c 1604
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>dbj|AK073216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004D04, full
           insert sequence
          Length = 1082

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 109 caaggccatcaccatcggcggcagcttcttcctgtacgccggcat 153
           ||||||||||||| ||| ||| ||||||| ||| |||||||||||
Sbjct: 674 caaggccatcaccttcgccgggagcttctacctctacgccggcat 718
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>gb|AC148293.6| Medicago truncatula clone mth2-16c13, complete sequence
          Length = 117793

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 84   tctccatgtccttcctgtccttgtccaaggccatcaccat 123
            |||||||| | ||||||||| ||||||| |||||||||||
Sbjct: 9645 tctccatgactttcctgtccctgtccaacgccatcaccat 9684
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>emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chromosome 10 Contains the
              gene for a novel thioesterase domain containing protein
              (FLJ11106), the gene for ribonuclease P (38kD) (RPP38), the
              gene for a novel protein (FLJ38219), the gene for a novel
              protein, the NMT2 gene for N-myristoyltransferase 2, the 3'
              end of the gene for a novel protein (LOC221061), a novel
              gene, a pseudogene similar to part of
              glyceraldehyde-3-phosphate dehydrogenase
              (GAPD)(G3PD,GAPDH), a peptidylprolyl isomerase A
              (cyclophilin A) (PPIA)(CYPA,CYPH) pseudogene, a NADH
              dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
              (NDUFA4)(MLRQ) pseudogene and three CpG islands, complete
              sequence
          Length = 194802

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 84     tctccatgtccttcctgtcctt 105
              ||||||||||||||||||||||
Sbjct: 108777 tctccatgtccttcctgtcctt 108798
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>gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complete sequence
          Length = 165723

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 166    atggattttcttcttcaccttc 187
              ||||||||||||||||||||||
Sbjct: 142703 atggattttcttcttcaccttc 142724
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>emb|AJ532590.1|PMA532590 Plantago major macronuclear mRNA for polyol transporter (plt2 gene)
          Length = 1891

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 161  ctcggatggattttcttcttcaccttcattccggagac 198
            ||||| ||||||||||||||||| ||  ||||||||||
Sbjct: 1589 ctcgggtggattttcttcttcacattgtttccggagac 1626
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>ref|XM_511685.1| PREDICTED: Pan troglodytes zinc finger CCCH type domain containing 5
            (LOC454890), mRNA
          Length = 3149

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  catcaccatcggcggcagctt 135
            |||||||||||||||||||||
Sbjct: 2268 catcaccatcggcggcagctt 2288
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>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster,
             partial sequence
          Length = 24637

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    cagcgcggcggtctccatgtc 93
             |||||||||||||||||||||
Sbjct: 23943 cagcgcggcggtctccatgtc 23963
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>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence
          Length = 188265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   aaaaattgaagctccaaattt 395
             |||||||||||||||||||||
Sbjct: 67799 aaaaattgaagctccaaattt 67819
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>ref|XM_964385.1| PREDICTED: Tribolium castaneum similar to CG5758-PA, isoform A
            (LOC657966), mRNA
          Length = 1690

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 271  cacgaaagacaaggtgaaagt 291
            |||||||||||||||||||||
Sbjct: 1378 cacgaaagacaaggtgaaagt 1398
to top
>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete
              sequence
          Length = 234105

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 377    aaattgaagctccaaatttcatctcgtat 405
              |||||| ||||||||||||||||| ||||
Sbjct: 118400 aaattgtagctccaaatttcatcttgtat 118428
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>ref|XM_940903.1| PREDICTED: Homo sapiens zinc finger CCCH-type containing 5 (ZC3H5),
            mRNA
          Length = 3603

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  catcaccatcggcggcagctt 135
            |||||||||||||||||||||
Sbjct: 1866 catcaccatcggcggcagctt 1886
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>ref|XM_036115.7| PREDICTED: Homo sapiens zinc finger CCCH-type containing 5 (ZC3H5),
            mRNA
          Length = 3603

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  catcaccatcggcggcagctt 135
            |||||||||||||||||||||
Sbjct: 1866 catcaccatcggcggcagctt 1886
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>gb|BC053362.1| Homo sapiens zinc finger CCCH-type containing 5, mRNA (cDNA clone
            IMAGE:6012927), partial cds
          Length = 3856

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  catcaccatcggcggcagctt 135
            |||||||||||||||||||||
Sbjct: 1663 catcaccatcggcggcagctt 1683
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 210     cgctggaggagatcgggaagc 230
               |||||||||||||||||||||
Sbjct: 1829336 cgctggaggagatcgggaagc 1829356
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>dbj|AB092604.1| Pectobacterium carotovorum subsp. carotovorum priA, cytR, ftsN
           genes for PriA, transcriptional repressor CytR, FtsN,
           partial and complete cds
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 112 ggccatcaccatcggcggcag 132
           |||||||||||||||||||||
Sbjct: 767 ggccatcaccatcggcggcag 747
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>emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chromosome X, complete
             sequence
          Length = 192676

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 377   aaattgaagctccaaatttcatctcgtat 405
             |||||| ||||||||||||||||| ||||
Sbjct: 13359 aaattgtagctccaaatttcatcttgtat 13387
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>dbj|AB051540.1| Homo sapiens mRNA for KIAA1753 protein, partial cds
          Length = 3839

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  catcaccatcggcggcagctt 135
            |||||||||||||||||||||
Sbjct: 1663 catcaccatcggcggcagctt 1683
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4139080 gccatcaccatcggcggcag 4139099
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>gb|AC091353.6| Rattus norvegicus 4 BAC CH230-1B20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 242904

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   caatcccctcccccaatctc 466
             ||||||||||||||||||||
Sbjct: 38026 caatcccctcccccaatctc 38045
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>gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 234084

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    caatcccctcccccaatctc 466
              ||||||||||||||||||||
Sbjct: 100181 caatcccctcccccaatctc 100162
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     cctgccgctggaggagatcg 224
               ||||||||||||||||||||
Sbjct: 2456223 cctgccgctggaggagatcg 2456204
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>emb|Z67734.1|CEB0198 Caenorhabditis elegans Cosmid B0198, complete sequence
          Length = 31278

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   atggattttcttcttcaccttcat 189
             ||||||||||||||||| ||||||
Sbjct: 12157 atggattttcttcttcatcttcat 12180
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4643696 gccatcaccatcggcggcag 4643715
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4401000 gccatcaccatcggcggcag 4401019
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4122025 gccatcaccatcggcggcag 4122044
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     cgcgtgaccagcgcggcggt 84
              ||||||||||||||||||||
Sbjct: 561774 cgcgtgaccagcgcggcggt 561793
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>ref|XM_780487.1| PREDICTED: Strongylocentrotus purpuratus similar to isocitrate
           dehydrogenase 2 (NADP+), mitochondrial (LOC580429), mRNA
          Length = 1892

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 ccaaggccatcaccatcggc 127
           ||||||||||||||||||||
Sbjct: 392 ccaaggccatcaccatcggc 411
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>emb|X03683.1|ECCYTR E. coli cytR gene coding for Cyt repressor
          Length = 1384

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 gccatcaccatcggcggcag 132
           ||||||||||||||||||||
Sbjct: 755 gccatcaccatcggcggcag 736
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>gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2 minutes
          Length = 96484

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gccatcaccatcggcggcag 132
             ||||||||||||||||||||
Sbjct: 85635 gccatcaccatcggcggcag 85654
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 3512679 gccatcaccatcggcggcag 3512660
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     caccatcggcggcagcttct 137
               ||||||||||||||||||||
Sbjct: 3893878 caccatcggcggcagcttct 3893897
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>ref|NM_077613.1| Caenorhabditis elegans B0198.1 (tetraspanin) mRNA, complete cds
          Length = 840

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 atggattttcttcttcaccttcat 189
           ||||||||||||||||| ||||||
Sbjct: 802 atggattttcttcttcatcttcat 779
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     ttttcggcatgaaggacagg 250
               ||||||||||||||||||||
Sbjct: 1126715 ttttcggcatgaaggacagg 1126696
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>gb|AC073416.8| Homo sapiens BAC clone RP11-136K15 from 2, complete sequence
          Length = 133529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    atctgtagtctgaaggtgcgctca 341
              |||||||||||||||||| |||||
Sbjct: 125376 atctgtagtctgaaggtgagctca 125353
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 3634138 gccatcaccatcggcggcag 3634119
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   tcaccatcggcggcagcttcttcc 140
             ||||||||||||||| ||||||||
Sbjct: 33869 tcaccatcggcggcaacttcttcc 33892
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>gb|AE005031.1| Halobacterium sp. NRC-1 section 62 of 170 of the complete genome
          Length = 11994

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  tgtacgccggcatcgcggcg 160
            ||||||||||||||||||||
Sbjct: 1396 tgtacgccggcatcgcggcg 1377
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>gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, complete sequence
          Length = 194871

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     atgtccttcctgtccttgtc 108
              ||||||||||||||||||||
Sbjct: 115730 atgtccttcctgtccttgtc 115711
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>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0056I06
          Length = 138653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    tcaccatcggcggcagcttcttcc 140
              ||||||||||||||| ||||||||
Sbjct: 132994 tcaccatcggcggcaacttcttcc 133017
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>ref|XM_319528.2| Anopheles gambiae str. PEST ENSANGP00000017784 (ENSANGG00000015295),
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  gcttcttcctgtacgccggc 151
            ||||||||||||||||||||
Sbjct: 1205 gcttcttcctgtacgccggc 1224
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>ref|XM_314193.2| Anopheles gambiae str. PEST ENSANGP00000014442 (ENSANGG00000011953),
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  gcttcttcctgtacgccggc 151
            ||||||||||||||||||||
Sbjct: 1205 gcttcttcctgtacgccggc 1224
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 113     gccatcaccatcggcggcagcttc 136
               ||||||| ||||||||||||||||
Sbjct: 2500561 gccatcaacatcggcggcagcttc 2500538
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>dbj|AK066280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066D13, full
            insert sequence
          Length = 4143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 117  tcaccatcggcggcagcttcttcc 140
            ||||||||||||||| ||||||||
Sbjct: 1134 tcaccatcggcggcaacttcttcc 1157
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>gb|AC145979.4| Gallus gallus BAC clone CH261-10P22 from chromosome unknown, complete
              sequence
          Length = 243329

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     ctccatgtccttcctgtcct 104
              ||||||||||||||||||||
Sbjct: 218395 ctccatgtccttcctgtcct 218414
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4994258 gccatcaccatcggcggcag 4994277
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>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster
              (IGK-distal) on chromosome 2
          Length = 407661

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    atctgtagtctgaaggtgcgctca 341
              |||||||||||||||||| |||||
Sbjct: 146033 atctgtagtctgaaggtgagctca 146010
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4925494 gccatcaccatcggcggcag 4925513
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 3542752 gccatcaccatcggcggcag 3542733
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 3977578 gccatcaccatcggcggcag 3977597
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     gccatcaccatcggcggcag 132
               ||||||||||||||||||||
Sbjct: 4338042 gccatcaccatcggcggcag 4338061
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>dbj|AP001242.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:KB225F1
          Length = 42854

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  atctgtagtctgaaggtgcgctca 341
            |||||||||||||||||| |||||
Sbjct: 3526 atctgtagtctgaaggtgagctca 3503
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>emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chromosome X, complete
             sequence
          Length = 117773

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tgtccttcctgtccttgtcc 109
             ||||||||||||||||||||
Sbjct: 53907 tgtccttcctgtccttgtcc 53926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,996,850
Number of Sequences: 3902068
Number of extensions: 3996850
Number of successful extensions: 76555
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75606
Number of HSP's gapped (non-prelim): 937
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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