ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome... 96 4e-17
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 96 4e-17
3dbj|AK120416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
4dbj|AK120409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
5gb|AY111918.1| Zea mays CL35348_1 mRNA sequence 96 4e-17
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 96 4e-17
7gb|BT024129.1| Zea mays clone EL01N0328C03 mRNA sequence 80 2e-12
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 64 1e-07
9dbj|AK100051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 1e-07
10dbj|AK100044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 1e-07
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 64 1e-07
12emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb... 64 1e-07
13gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence 46 0.030
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.46
15dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.46
16ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM056... 40 1.8
17emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 o... 40 1.8
18emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank... 40 1.8
19gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complet... 40 1.8
20gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complet... 40 1.8
21gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete ... 40 1.8
22dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 1.8
23ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 1.8
24dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 1.8
25ref|NM_111493.3| Arabidopsis thaliana unknown protein AT3G06180 ... 38 7.2
26ref|XM_587107.2| PREDICTED: Bos taurus similar to CG2083-PA (LOC... 38 7.2
27ref|XM_360335.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 7.2
28gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC... 38 7.2
29emb|CR354429.17| Zebrafish DNA sequence from clone CH211-150F22 ... 38 7.2
30gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, comple... 38 7.2
31ref|XM_779379.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.2
32gb|AF526216.1| Argopecten irradians isolate iolsaicl97ct118cn126... 38 7.2
33gb|BT025029.1| Arabidopsis thaliana At3g06180 mRNA, complete cds 38 7.2
34emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chr... 38 7.2
35emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in ... 38 7.2
36gb|AC152819.6| Mus musculus BAC clone RP24-572P24 from chromosom... 38 7.2
37dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 7.2
38ref|XM_687341.1| PREDICTED: Danio rerio similar to protein phosp... 38 7.2
39gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 38 7.2
40emb|BX825214.1|CNS0A533 Arabidopsis thaliana Full-length cDNA Co... 38 7.2
41gb|BT021988.1| Arabidopsis thaliana At3g06180 mRNA, complete cds 38 7.2
42gb|AY954970.1| Staphylococcus phage Twort, complete genome 38 7.2
43gb|AF258609.1|AF258609 Aegilops tauschii starch synthase III gen... 38 7.2
44gb|AF258608.1|AF258608 Triticum aestivum starch synthase III mRN... 38 7.2
45dbj|AK109556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.2
46gb|AC004264.1|AC004264 Homo sapiens PAC clone RP1-102K2 from 22q... 38 7.2
47dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.2
48gb|DQ138847.1| Drosophila erecta voucher stock #14021-0224.0 CG6... 38 7.2
49gb|DQ138846.1| Drosophila yakuba strain T33 CG6407 gene, partial... 38 7.2
50gb|DQ138844.1| Drosophila simulans strain Ky-b CG6407 gene, part... 38 7.2
51gb|DQ138843.1| Drosophila simulans strain Ky-a CG6407 gene, part... 38 7.2 
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0076K20, complete sequence
          Length = 127338

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 24   atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
            |||||||||  ||||| ||| | ||||||||||| |||||| | ||||||||| | ||||
Sbjct: 8022 atgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaac 7963

                                                           
Query: 84   atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
            |||||||||| |||||||  ||||| |||||||||||||| ||||||
Sbjct: 7962 atggtgtggaattggctgccgaggacgagaagatcaagcacgagagg 7916
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                           
Query: 24      atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
               |||||||||  ||||| ||| | ||||||||||| |||||| | ||||||||| | ||||
Sbjct: 2718776 atgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaac 2718835

                                                              
Query: 84      atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
               |||||||||| |||||||  ||||| |||||||||||||| ||||||
Sbjct: 2718836 atggtgtggaattggctgccgaggacgagaagatcaagcacgagagg 2718882
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>dbj|AK120416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093B10, full
            insert sequence
          Length = 5433

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                        
Query: 24   atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
            |||||||||  ||||| ||| | ||||||||||| |||||| | ||||||||| | ||||
Sbjct: 4756 atgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaac 4815

                                                           
Query: 84   atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
            |||||||||| |||||||  ||||| |||||||||||||| ||||||
Sbjct: 4816 atggtgtggaattggctgccgaggacgagaagatcaagcacgagagg 4862
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>dbj|AK120409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M21, full
            insert sequence
          Length = 2643

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                        
Query: 24   atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
            |||||||||  ||||| ||| | ||||||||||| |||||| | ||||||||| | ||||
Sbjct: 1970 atgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaac 2029

                                                           
Query: 84   atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
            |||||||||| |||||||  ||||| |||||||||||||| ||||||
Sbjct: 2030 atggtgtggaattggctgccgaggacgagaagatcaagcacgagagg 2076
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>gb|AY111918.1| Zea mays CL35348_1 mRNA sequence
          Length = 780

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                       
Query: 35  aaggtagatgtgatggatgatgacgacctacttgagagggaattagaacatggtgtggag 94
           ||||| |||||||||||||| || |||||  ||||||||||  | |||||||| ||||||
Sbjct: 535 aaggtcgatgtgatggatgacgatgacctcattgagagggagctggaacatggcgtggag 476

                                              
Query: 95  ttggctgntgaggatgagaagatcaagcaggagag 129
           |||||||  |||||||||||| |||||||||||||
Sbjct: 475 ttggctgccgaggatgagaaggtcaagcaggagag 441
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                           
Query: 24      atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
               |||||||||  ||||| ||| | ||||||||||| |||||| | ||||||||| | ||||
Sbjct: 2727807 atgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaac 2727866

                                                              
Query: 84      atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
               |||||||||| |||||||  ||||| |||||||||||||| ||||||
Sbjct: 2727867 atggtgtggaattggctgccgaggacgagaagatcaagcacgagagg 2727913
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>gb|BT024129.1| Zea mays clone EL01N0328C03 mRNA sequence
          Length = 1879

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                        
Query: 35   aaggtagatgtgatggatgatgacgacctacttgagagggaattagaacatggtgtggag 94
            ||||| |||||||||||||| || |||||  ||||||||||  | |||||||| ||||||
Sbjct: 1420 aaggtcgatgtgatggatgacgatgacctcattgagagggagctggaacatggcgtggag 1479

                                               
Query: 95   ttggctgntgaggatgagaagatcaagcaggagag 129
            |||||||  |||||||||||| |||| || |||||
Sbjct: 1480 ttggctgccgaggatgagaaggtcaaacaagagag 1514
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                            
Query: 24       atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
                ||||||||||||||||||| || || |||||||| ||    ||||||||| || ||||||
Sbjct: 18004246 atgttgctaggaaggtagaggtaatagatgatgatgatgatcttgagaggcaactagaac 18004305

                                                               
Query: 84       atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
                |||   | || ||||||| ||||||| | ||||| ||||||||||||
Sbjct: 18004306 atgacattgaattggctgttgaggataataagataaagcaggagagg 18004352
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>dbj|AK100051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155O14, full
            insert sequence
          Length = 2511

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
            ||||||||||||||||||| || || |||||||| ||    ||||||||| || ||||||
Sbjct: 1651 atgttgctaggaaggtagaggtaatagatgatgatgatgatcttgagaggcaactagaac 1710

                                                           
Query: 84   atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
            |||   | || ||||||| ||||||| | ||||| ||||||||||||
Sbjct: 1711 atgacattgaattggctgttgaggataataagataaagcaggagagg 1757
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>dbj|AK100044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K21, full
            insert sequence
          Length = 2571

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                        
Query: 24   atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
            ||||||||||||||||||| || || |||||||| ||    ||||||||| || ||||||
Sbjct: 1649 atgttgctaggaaggtagaggtaatagatgatgatgatgatcttgagaggcaactagaac 1708

                                                           
Query: 84   atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
            |||   | || ||||||| ||||||| | ||||| ||||||||||||
Sbjct: 1709 atgacattgaattggctgttgaggataataagataaagcaggagagg 1755
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                            
Query: 24       atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
                ||||||||||||||||||| || || |||||||| ||    ||||||||| || ||||||
Sbjct: 17930567 atgttgctaggaaggtagaggtaatagatgatgatgatgatcttgagaggcaactagaac 17930626

                                                               
Query: 84       atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
                |||   | || ||||||| ||||||| | ||||| ||||||||||||
Sbjct: 17930627 atgacattgaattggctgttgaggataataagataaagcaggagagg 17930673
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>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124294

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                         
Query: 24    atgttgctaggaaggtagatgtgatggatgatgacgacctacttgagagggaattagaac 83
             ||||||||||||||||||| || || |||||||| ||    ||||||||| || ||||||
Sbjct: 81446 atgttgctaggaaggtagaggtaatagatgatgatgatgatcttgagaggcaactagaac 81387

                                                            
Query: 84    atggtgtggagttggctgntgaggatgagaagatcaagcaggagagg 130
             |||   | || ||||||| ||||||| | ||||| ||||||||||||
Sbjct: 81386 atgacattgaattggctgttgaggataataagataaagcaggagagg 81340
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>gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence
          Length = 191204

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 17     aagggttatgttgctaggaaggt 39
              |||||||||||||||||||||||
Sbjct: 173424 aagggttatgttgctaggaaggt 173446
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 76       attagaacatggtgtggagtt 96
                |||||||||||||||||||||
Sbjct: 15841749 attagaacatggtgtggagtt 15841769
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>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    attagaacatggtgtggagtt 96
             |||||||||||||||||||||
Sbjct: 81263 attagaacatggtgtggagtt 81283
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>ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM05642.1) partial mRNA
          Length = 4404

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  gagaagatcaagcaggagag 129
            ||||||||||||||||||||
Sbjct: 3385 gagaagatcaagcaggagag 3404
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>emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 on chromosome 6p22.3-24.1
              Contains part of the SCA1 gene for spinocerebellar ataxia 1
              (olivopontocerebellar ataxia 1, autosomal dominant, ataxin
              1), complete sequence
          Length = 165363

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aagatcaagcaggagaggga 132
              ||||||||||||||||||||
Sbjct: 112006 aagatcaagcaggagaggga 111987
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>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial)
             genes
          Length = 60726

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgagaagatcaagcaggaga 128
             ||||||||||||||||||||
Sbjct: 23312 tgagaagatcaagcaggaga 23331
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>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence
          Length = 115385

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    tgagaagatcaagcaggaga 128
              ||||||||||||||||||||
Sbjct: 108211 tgagaagatcaagcaggaga 108230
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>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgagaagatcaagcaggaga 128
             ||||||||||||||||||||
Sbjct: 21594 tgagaagatcaagcaggaga 21613
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>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence
          Length = 78437

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgagaagatcaagcaggaga 128
             ||||||||||||||||||||
Sbjct: 17171 tgagaagatcaagcaggaga 17190
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 103     tgaggatgagaagatcaagcagga 126
               ||||||||||||| ||||||||||
Sbjct: 2325959 tgaggatgagaagctcaagcagga 2325982
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaggtagatgtgatggatga 54
              ||||||||||||||||||||
Sbjct: 730561 aaggtagatgtgatggatga 730580
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>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete
              sequence, 4 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaggtagatgtgatggatga 54
              ||||||||||||||||||||
Sbjct: 130561 aaggtagatgtgatggatga 130580
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>ref|NM_111493.3| Arabidopsis thaliana unknown protein AT3G06180 mRNA, complete cds
          Length = 934

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 110 gagaagatcaagcaggagaggga 132
           |||||||||||| ||||||||||
Sbjct: 304 gagaagatcaaggaggagaggga 282
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>ref|XM_587107.2| PREDICTED: Bos taurus similar to CG2083-PA (LOC510025), mRNA
          Length = 2238

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tgagaagatcaagcaggag 127
           |||||||||||||||||||
Sbjct: 345 tgagaagatcaagcaggag 363
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>ref|XM_360335.1| Magnaporthe grisea 70-15 hypothetical protein (MG05709.4) partial
           mRNA
          Length = 1611

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 103 tgaggatgagaagatcaag 121
           |||||||||||||||||||
Sbjct: 957 tgaggatgagaagatcaag 975
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>gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence,
             complete sequence
          Length = 93478

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 110   gagaagatcaagcaggagaggga 132
             |||||||||||| ||||||||||
Sbjct: 38184 gagaagatcaaggaggagaggga 38162
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>emb|CR354429.17| Zebrafish DNA sequence from clone CH211-150F22 in linkage group 25,
             complete sequence
          Length = 178425

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   agaagatcaagcaggagag 129
             |||||||||||||||||||
Sbjct: 38167 agaagatcaagcaggagag 38149
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>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence
          Length = 182686

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 25    tgttgctaggaaggtagatgtga 47
             |||||| ||||||||||||||||
Sbjct: 25334 tgttgccaggaaggtagatgtga 25312
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>ref|XM_779379.1| PREDICTED: Strongylocentrotus purpuratus similar to C61 protein
            (LOC579252), partial mRNA
          Length = 1395

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 111  agaagatcaagcaggagagggac 133
            ||||| |||||||||||||||||
Sbjct: 1287 agaaggtcaagcaggagagggac 1309
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>gb|AF526216.1| Argopecten irradians isolate iolsaicl97ct118cn126 ribosomal protein
           S27-1 mRNA, complete cds
          Length = 635

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 108 atgagaagatcaagcagga 126
           |||||||||||||||||||
Sbjct: 486 atgagaagatcaagcagga 468
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>gb|BT025029.1| Arabidopsis thaliana At3g06180 mRNA, complete cds
          Length = 726

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 110 gagaagatcaagcaggagaggga 132
           |||||||||||| ||||||||||
Sbjct: 287 gagaagatcaaggaggagaggga 265
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>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete
              sequence
          Length = 164120

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     ctacttgagagggaattag 80
              |||||||||||||||||||
Sbjct: 160052 ctacttgagagggaattag 160034
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>emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in linkage group 4
             Contains three novel genes and six CpG islands, complete
             sequence
          Length = 168908

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   gagaagatcaagcaggaga 128
             |||||||||||||||||||
Sbjct: 33951 gagaagatcaagcaggaga 33933
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>gb|AC152819.6| Mus musculus BAC clone RP24-572P24 from chromosome 10, complete
             sequence
          Length = 185665

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 25    tgttgctaggaaggtagatgtga 47
             |||||| ||||||||||||||||
Sbjct: 69669 tgttgccaggaaggtagatgtga 69691
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 104     gaggatgagaagatcaagc 122
               |||||||||||||||||||
Sbjct: 4318247 gaggatgagaagatcaagc 4318229
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>ref|XM_687341.1| PREDICTED: Danio rerio similar to protein phosphatase 1H (PP2C
           domain containing) (LOC563978), mRNA
          Length = 678

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 agaagatcaagcaggagag 129
           |||||||||||||||||||
Sbjct: 503 agaagatcaagcaggagag 521
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 26      gttgctaggaaggtagatgtgat 48
               |||||| ||||||||||||||||
Sbjct: 1562512 gttgctgggaaggtagatgtgat 1562534
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>emb|BX825214.1|CNS0A533 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL20ZD07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 728

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 110 gagaagatcaagcaggagaggga 132
           |||||||||||| ||||||||||
Sbjct: 91  gagaagatcaaggaggagaggga 69
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>gb|BT021988.1| Arabidopsis thaliana At3g06180 mRNA, complete cds
          Length = 825

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 110 gagaagatcaagcaggagaggga 132
           |||||||||||| ||||||||||
Sbjct: 295 gagaagatcaaggaggagaggga 273
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>gb|AY954970.1| Staphylococcus phage Twort, complete genome
          Length = 130706

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      gaagaaattcgaagggtta 24
              |||||||||||||||||||
Sbjct: 129578 gaagaaattcgaagggtta 129596
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>gb|AF258609.1|AF258609 Aegilops tauschii starch synthase III gene, complete cds
          Length = 11550

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 38   gtagatgtgatggatgatg 56
            |||||||||||||||||||
Sbjct: 3053 gtagatgtgatggatgatg 3071
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>gb|AF258608.1|AF258608 Triticum aestivum starch synthase III mRNA, complete cds
          Length = 5346

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  gtagatgtgatggatgatg 56
           |||||||||||||||||||
Sbjct: 707 gtagatgtgatggatgatg 725
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>dbj|AK109556.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D07, full
            insert sequence
          Length = 2699

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gagaagatcaagcaggaga 128
            |||||||||||||||||||
Sbjct: 1548 gagaagatcaagcaggaga 1566
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>gb|AC004264.1|AC004264 Homo sapiens PAC clone RP1-102K2 from 22q12.1-qter, complete sequence
          Length = 47188

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 110   gagaagatcaagcaggagaggga 132
             ||||||||| |||||||||||||
Sbjct: 22145 gagaagatccagcaggagaggga 22123
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>dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-686G14, complete
             sequence
          Length = 205903

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 6     gaagaaattcgaagggttatgtt 28
             |||||||||||||||||| ||||
Sbjct: 76036 gaagaaattcgaagggttttgtt 76014
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>gb|DQ138847.1| Drosophila erecta voucher stock #14021-0224.0 CG6407 gene, partial
            cds
          Length = 2952

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gagaagatcaagcaggaga 128
            |||||||||||||||||||
Sbjct: 2296 gagaagatcaagcaggaga 2314
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>gb|DQ138846.1| Drosophila yakuba strain T33 CG6407 gene, partial cds
          Length = 2997

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gagaagatcaagcaggaga 128
            |||||||||||||||||||
Sbjct: 2341 gagaagatcaagcaggaga 2359
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>gb|DQ138844.1| Drosophila simulans strain Ky-b CG6407 gene, partial cds
          Length = 2961

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gagaagatcaagcaggaga 128
            |||||||||||||||||||
Sbjct: 2305 gagaagatcaagcaggaga 2323
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>gb|DQ138843.1| Drosophila simulans strain Ky-a CG6407 gene, partial cds
          Length = 2961

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gagaagatcaagcaggaga 128
            |||||||||||||||||||
Sbjct: 2305 gagaagatcaagcaggaga 2323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,100,926
Number of Sequences: 3902068
Number of extensions: 1100926
Number of successful extensions: 76257
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76014
Number of HSP's gapped (non-prelim): 238
length of query: 150
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 129
effective length of database: 17,151,101,840
effective search space: 2212492137360
effective search space used: 2212492137360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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